Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:30:41 (2031506): wrapper (7.7.26015): starting
07:30:41 (2031506): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 07:30:41] Arguments: --nthreads 12
[2025-06-06 07:30:41] Threads: 12
[2025-06-06 07:30:41] Checking for CVMFS
[2025-06-06 07:30:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 07:30:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 07:30:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 07:30:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 07:30:42] 2.12.7.0 3695 2051 53500 146847 2 56 4059853 4096000 2736 130560 0 5607646 99.997 479937 127 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 07:30:42] CVMFS is ok
[2025-06-06 07:30:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 07:30:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 07:30:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 07:30:42] Further information can be found at the LHC@home message board.
[2025-06-06 07:30:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:30:42] Checking for apptainer binary...
[2025-06-06 07:30:42] apptainer is not installed, using version from CVMFS
[2025-06-06 07:30:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:30:43] dualxeon2
[2025-06-06 07:30:43] apptainer works
[2025-06-06 07:30:43] Set ATHENA_PROC_NUMBER=12
[2025-06-06 07:30:43] Set ATHENA_CORE_NUMBER=12
[2025-06-06 07:30:43] Starting ATLAS job with PandaID=6678363643
[2025-06-06 07:30:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 09:10:23]  *** The last 200 lines of the pilot log: ***
[2025-06-06 09:10:23]  mtime=0
[2025-06-06 09:10:23]  protocol_id=None
[2025-06-06 09:10:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 09:10:23]  replicas=None
[2025-06-06 09:10:23]  scope=mc23_13p6TeV
[2025-06-06 09:10:23]  status=None
[2025-06-06 09:10:23]  status_code=0
[2025-06-06 09:10:23]  storage_token=
[2025-06-06 09:10:23]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6678363643/log.45006595._053518.job.log.tgz.1
[2025-06-06 09:10:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/66/log.45006595._053518.job.log.tgz.1
[2025-06-06 09:10:23]  workdir=None
[2025-06-06 09:10:23] ]
[2025-06-06 09:10:23] 2025-06-06 09:09:52,836 | INFO     | transferring file log.45006595._053518.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6678363643/log.45006595._053518.job.log.tgz.1 to /var/lib/boinc
[2025-06-06 09:10:23] 2025-06-06 09:09:52,836 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6678363643/log.45006595._053518.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-06 09:10:23] 2025-06-06 09:09:52,860 | INFO     | adding to output.list: log.45006595._053518.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/66/log.45006595._053518.job.log.tg
[2025-06-06 09:10:23] 2025-06-06 09:09:52,861 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 09:10:23] 2025-06-06 09:09:52,861 | INFO     | summary of transferred files:
[2025-06-06 09:10:23] 2025-06-06 09:09:52,861 | INFO     |  -- lfn=log.45006595._053518.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 09:10:23] 2025-06-06 09:09:52,861 | INFO     | stage-out finished correctly
[2025-06-06 09:10:23] 2025-06-06 09:09:53,019 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 09:10:23] 2025-06-06 09:09:55,304 | INFO     | job 6678363643 has state=finished
[2025-06-06 09:10:23] 2025-06-06 09:09:55,304 | INFO     | preparing for final server update for job 6678363643 in state='finished'
[2025-06-06 09:10:23] 2025-06-06 09:09:55,305 | INFO     | this job has now completed (state=finished)
[2025-06-06 09:10:23] 2025-06-06 09:09:55,305 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 09:10:23] 2025-06-06 09:09:55,305 | INFO     | log transfer has been attempted: DONE
[2025-06-06 09:10:23] 2025-06-06 09:09:55,305 | INFO     | job 6678363643 has finished - writing final server update
[2025-06-06 09:10:23] 2025-06-06 09:09:55,306 | INFO     | total number of processed events: 400 (read)
[2025-06-06 09:10:23] 2025-06-06 09:09:55,312 | INFO     | executing command: lscpu
[2025-06-06 09:10:23] 2025-06-06 09:09:55,372 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 09:10:23] 2025-06-06 09:09:56,533 | WARNING  | process 2041954 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 09:10:23] 2025-06-06 09:09:56,541 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678363643/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:10:23] 2025-06-06 09:09:56,805 | INFO     | number of running child processes to parent process 2041954: 1
[2025-06-06 09:10:23] 2025-06-06 09:09:56,806 | INFO     | maximum number of monitored processes: 6
[2025-06-06 09:10:23] 2025-06-06 09:09:59,312 | INFO     | monitor loop #437: job 0:6678363643 is in state 'finished'
[2025-06-06 09:10:23] 2025-06-06 09:09:59,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:10:23] 2025-06-06 09:10:01,815 | INFO     | monitor loop #438: job 0:6678363643 is in state 'finished'
[2025-06-06 09:10:23] 2025-06-06 09:10:01,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:10:23] 2025-06-06 09:10:02,309 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 09:10:23] 2025-06-06 09:10:02,309 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678363643/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:10:23] 2025-06-06 09:10:02,310 | INFO     | extracted standard info from prmon json
[2025-06-06 09:10:23] 2025-06-06 09:10:02,310 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 09:10:23] 2025-06-06 09:10:02,310 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 09:10:23] 2025-06-06 09:10:02,310 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 09:10:23] 2025-06-06 09:10:02,310 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 09:10:23] 2025-06-06 09:10:02,313 | INFO     | fitting pss+swap vs Time
[2025-06-06 09:10:23] 2025-06-06 09:10:02,313 | INFO     | sum of square deviations: 226022842.5
[2025-06-06 09:10:23] 2025-06-06 09:10:02,314 | INFO     | sum of deviations: -8177991687.5
[2025-06-06 09:10:23] 2025-06-06 09:10:02,314 | INFO     | mean x: 1749198116.5
[2025-06-06 09:10:23] 2025-06-06 09:10:02,314 | INFO     | mean y: 2825292.811111111
[2025-06-06 09:10:23] 2025-06-06 09:10:02,314 | INFO     | -- intersect: 63292568481.168976
[2025-06-06 09:10:23] 2025-06-06 09:10:02,314 | INFO     | intersect: 63292568481.168976
[2025-06-06 09:10:23] 2025-06-06 09:10:02,314 | INFO     | chi2: 0.0945023645978584
[2025-06-06 09:10:23] 2025-06-06 09:10:02,315 | INFO     | -- intersect: 63292568481.168976
[2025-06-06 09:10:23] 2025-06-06 09:10:02,315 | INFO     | current memory leak: -36.18 B/s (using 90 data points, chi2=0.09)
[2025-06-06 09:10:23] 2025-06-06 09:10:02,315 | INFO     | ..............................
[2025-06-06 09:10:23] 2025-06-06 09:10:02,315 | INFO     | . Timing measurements:
[2025-06-06 09:10:23] 2025-06-06 09:10:02,315 | INFO     | . get job = 0 s
[2025-06-06 09:10:23] 2025-06-06 09:10:02,316 | INFO     | . initial setup = 3 s
[2025-06-06 09:10:23] 2025-06-06 09:10:02,316 | INFO     | . payload setup = 10 s
[2025-06-06 09:10:23] 2025-06-06 09:10:02,316 | INFO     | . stage-in = 0 s
[2025-06-06 09:10:23] 2025-06-06 09:10:02,316 | INFO     | . payload execution = 5901 s
[2025-06-06 09:10:23] 2025-06-06 09:10:02,316 | INFO     | . stage-out = 1 s
[2025-06-06 09:10:23] 2025-06-06 09:10:02,316 | INFO     | . log creation = 0 s
[2025-06-06 09:10:23] 2025-06-06 09:10:02,316 | INFO     | ..............................
[2025-06-06 09:10:23] 2025-06-06 09:10:02,498 | INFO     | 
[2025-06-06 09:10:23] 2025-06-06 09:10:02,498 | INFO     | job summary report
[2025-06-06 09:10:23] 2025-06-06 09:10:02,498 | INFO     | --------------------------------------------------
[2025-06-06 09:10:23] 2025-06-06 09:10:02,498 | INFO     | PanDA job id: 6678363643
[2025-06-06 09:10:23] 2025-06-06 09:10:02,498 | INFO     | task id: 45006595
[2025-06-06 09:10:23] 2025-06-06 09:10:02,498 | INFO     | errors: (none)
[2025-06-06 09:10:23] 2025-06-06 09:10:02,499 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 09:10:23] 2025-06-06 09:10:02,499 | INFO     | pilot state: finished 
[2025-06-06 09:10:23] 2025-06-06 09:10:02,499 | INFO     | transexitcode: 0
[2025-06-06 09:10:23] 2025-06-06 09:10:02,499 | INFO     | exeerrorcode: 0
[2025-06-06 09:10:23] 2025-06-06 09:10:02,499 | INFO     | exeerrordiag: 
[2025-06-06 09:10:23] 2025-06-06 09:10:02,499 | INFO     | exitcode: 0
[2025-06-06 09:10:23] 2025-06-06 09:10:02,499 | INFO     | exitmsg: OK
[2025-06-06 09:10:23] 2025-06-06 09:10:02,499 | INFO     | cpuconsumptiontime: 47746 s
[2025-06-06 09:10:23] 2025-06-06 09:10:02,499 | INFO     | nevents: 400
[2025-06-06 09:10:23] 2025-06-06 09:10:02,500 | INFO     | neventsw: 0
[2025-06-06 09:10:23] 2025-06-06 09:10:02,500 | INFO     | pid: 2041954
[2025-06-06 09:10:23] 2025-06-06 09:10:02,500 | INFO     | pgrp: 2041954
[2025-06-06 09:10:23] 2025-06-06 09:10:02,500 | INFO     | corecount: 12
[2025-06-06 09:10:23] 2025-06-06 09:10:02,500 | INFO     | event service: False
[2025-06-06 09:10:23] 2025-06-06 09:10:02,500 | INFO     | sizes: {0: 2397235, 1: 2397377, 8: 2397583, 12: 2397611, 5912: 2424250, 5914: 2433389, 5923: 2433503}
[2025-06-06 09:10:23] 2025-06-06 09:10:02,500 | INFO     | --------------------------------------------------
[2025-06-06 09:10:23] 2025-06-06 09:10:02,500 | INFO     | 
[2025-06-06 09:10:23] 2025-06-06 09:10:02,501 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 09:10:23] 2025-06-06 09:10:02,532 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 09:10:23] 2025-06-06 09:10:02,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 09:10:23] 2025-06-06 09:10:02,535 | INFO     | job 6678363643 has completed (purged errors)
[2025-06-06 09:10:23] 2025-06-06 09:10:02,535 | INFO     | overall cleanup function is called
[2025-06-06 09:10:23] 2025-06-06 09:10:03,552 | INFO     | --- collectZombieJob: --- 10, [2041954]
[2025-06-06 09:10:23] 2025-06-06 09:10:03,552 | INFO     | zombie collector waiting for pid 2041954
[2025-06-06 09:10:23] 2025-06-06 09:10:03,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 09:10:23] 2025-06-06 09:10:03,552 | INFO     | collected zombie processes
[2025-06-06 09:10:23] 2025-06-06 09:10:03,552 | INFO     | will attempt to kill all subprocesses of pid=2041954
[2025-06-06 09:10:23] 2025-06-06 09:10:03,713 | INFO     | PID=2035255 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 09:10:23] 2025-06-06 09:10:03,713 | INFO     | .. there are 4 such processes running
[2025-06-06 09:10:23] 2025-06-06 09:10:03,849 | INFO     | process IDs to be killed: [2041954] (in reverse order)
[2025-06-06 09:10:23] 2025-06-06 09:10:03,915 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 09:10:23] 2025-06-06 09:10:03,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 09:10:23] 2025-06-06 09:10:03,924 | INFO     | did not find any defunct processes belonging to 2041954
[2025-06-06 09:10:23] 2025-06-06 09:10:03,928 | INFO     | did not find any defunct processes belonging to 2041954
[2025-06-06 09:10:23] 2025-06-06 09:10:03,928 | INFO     | ready for new job
[2025-06-06 09:10:23] 2025-06-06 09:10:03,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 09:10:23] 2025-06-06 09:10:03,934 | INFO     | **************************************
[2025-06-06 09:10:23] 2025-06-06 09:10:03,934 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 09:10:23] 2025-06-06 09:10:03,934 | INFO     | **************************************
[2025-06-06 09:10:23] 2025-06-06 09:10:03,934 | INFO     | 
[2025-06-06 09:10:23] 2025-06-06 09:10:03,936 | INFO     | architecture information:
[2025-06-06 09:10:23] 2025-06-06 09:10:03,936 | INFO     | executing command: cat /etc/os-release
[2025-06-06 09:10:23] 2025-06-06 09:10:03,960 | INFO     | cat /etc/os-release:
[2025-06-06 09:10:23] NAME="CentOS Linux"
[2025-06-06 09:10:23] VERSION="7 (Core)"
[2025-06-06 09:10:23] ID="centos"
[2025-06-06 09:10:23] ID_LIKE="rhel fedora"
[2025-06-06 09:10:23] VERSION_ID="7"
[2025-06-06 09:10:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 09:10:23] ANSI_COLOR="0;31"
[2025-06-06 09:10:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 09:10:23] HOME_URL="https://www.centos.org/"
[2025-06-06 09:10:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 09:10:23] 
[2025-06-06 09:10:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 09:10:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 09:10:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 09:10:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 09:10:23] 
[2025-06-06 09:10:23] 2025-06-06 09:10:03,961 | INFO     | **************************************
[2025-06-06 09:10:23] 2025-06-06 09:10:04,463 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 09:10:23] 2025-06-06 09:10:04,487 | INFO     | sufficient remaining disk space (94988402688 B)
[2025-06-06 09:10:23] 2025-06-06 09:10:04,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 09:10:23] 2025-06-06 09:10:04,488 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 09:10:23] 2025-06-06 09:10:04,488 | INFO     | update_server=False
[2025-06-06 09:10:23] 2025-06-06 09:10:04,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 09:10:23] 2025-06-06 09:10:04,489 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:10:23] 2025-06-06 09:10:04,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 09:10:23] 2025-06-06 09:10:04,489 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 09:10:23] 2025-06-06 09:10:04,490 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 09:10:23] 2025-06-06 09:10:04,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 09:10:23] 2025-06-06 09:10:04,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 09:10:23] 2025-06-06 09:10:04,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 09:10:23] 2025-06-06 09:10:04,931 | INFO     | all data control threads have been joined
[2025-06-06 09:10:23] 2025-06-06 09:10:05,152 | INFO     | all payload control threads have been joined
[2025-06-06 09:10:23] 2025-06-06 09:10:05,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:10:23] 2025-06-06 09:10:05,325 | INFO     | aborting loop
[2025-06-06 09:10:23] 2025-06-06 09:10:05,493 | INFO     | [job] retrieve thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:05,495 | INFO     | [job] queue monitor thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:05,509 | INFO     | all job control threads have been joined
[2025-06-06 09:10:23] 2025-06-06 09:10:05,907 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:05,936 | INFO     | [data] control thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:06,007 | INFO     | [payload] failed_post thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:06,157 | INFO     | [payload] control thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:06,198 | INFO     | [job] validate thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:06,297 | INFO     | [data] copytool_in thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:06,330 | INFO     | [job] job monitor thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:06,363 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:06,495 | INFO     | [data] copytool_out thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:06,514 | INFO     | [job] control thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:06,833 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:06,926 | INFO     | [payload] validate_post thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:08,496 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:14,628 | INFO     | job.realtimelogging is not enabled
[2025-06-06 09:10:23] 2025-06-06 09:10:15,633 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 09:10:23] 2025-06-06 09:10:17,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127022520186688)>', '<ExcThread(monitor, started 127022191838976)>']
[2025-06-06 09:10:23] 2025-06-06 09:10:18,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 09:10:23] 2025-06-06 09:10:18,560 | INFO     | [monitor] control thread has ended
[2025-06-06 09:10:23] 2025-06-06 09:10:22,716 | INFO     | all workflow threads have been joined
[2025-06-06 09:10:23] 2025-06-06 09:10:22,716 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 09:10:23] 2025-06-06 09:10:22,716 | INFO     | traces error code: 0
[2025-06-06 09:10:23] 2025-06-06 09:10:22,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 09:10:23] 2025-06-06 09:10:22,820 [wrapper] ==== pilot stdout END ====
[2025-06-06 09:10:23] 2025-06-06 09:10:22,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 09:10:23] 2025-06-06 09:10:22,827 [wrapper] pilotpid: 2035255
[2025-06-06 09:10:23] 2025-06-06 09:10:22,836 [wrapper] Pilot exit status: 0
[2025-06-06 09:10:23] 2025-06-06 09:10:22,856 [wrapper] pandaids: 6678363643
[2025-06-06 09:10:23] 2025-06-06 09:10:22,925 [wrapper] cleanup supervisor_pilot 2130284 2035256
[2025-06-06 09:10:23] 2025-06-06 09:10:22,932 [wrapper] Test setup, not cleaning
[2025-06-06 09:10:23] 2025-06-06 09:10:22,935 [wrapper] apfmon messages muted
[2025-06-06 09:10:23] 2025-06-06 09:10:22,941 [wrapper] ==== wrapper stdout END ====
[2025-06-06 09:10:23] 2025-06-06 09:10:22,947 [wrapper] ==== wrapper stderr END ====
[2025-06-06 09:10:23]  *** Error codes and diagnostics ***
[2025-06-06 09:10:23]     "exeErrorCode": 0,
[2025-06-06 09:10:23]     "exeErrorDiag": "",
[2025-06-06 09:10:23]     "pilotErrorCode": 0,
[2025-06-06 09:10:23]     "pilotErrorDiag": "",
[2025-06-06 09:10:23]  *** Listing of results directory ***
[2025-06-06 09:10:23] total 386540
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:25 queuedata.json
[2025-06-06 09:10:23] -rwx------ 1 boinc boinc     37140 Jun  4 05:26 runpilot2-wrapper.sh
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc       100 Jun  6 07:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 09:10:23] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 07:30 run_atlas
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc       105 Jun  6 07:30 job.xml
[2025-06-06 09:10:23] -rw-r--r-- 2 boinc boinc 212983196 Jun  6 07:30 EVNT.45006593._002142.pool.root.1
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc      6557 Jun  6 07:30 init_data.xml
[2025-06-06 09:10:23] drwxrwx--x 2 boinc boinc      4096 Jun  6 07:30 shared
[2025-06-06 09:10:23] -rw-r--r-- 2 boinc boinc    508887 Jun  6 07:30 input.tar.gz
[2025-06-06 09:10:23] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:30 start_atlas.sh
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc         0 Jun  6 07:30 boinc_lockfile
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc      2525 Jun  6 07:30 pandaJob.out
[2025-06-06 09:10:23] -rw------- 1 boinc boinc    987967 Jun  6 07:30 agis_schedconf.cvmfs.json
[2025-06-06 09:10:23] -rw------- 1 boinc boinc   1598969 Jun  6 07:30 agis_ddmendpoints.agis.ALL.json
[2025-06-06 09:10:23] drwx------ 4 boinc boinc      4096 Jun  6 07:30 pilot3
[2025-06-06 09:10:23] -rw------- 1 boinc boinc 177108341 Jun  6 09:09 HITS.45006595._053518.pool.root.1
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc       529 Jun  6 09:09 boinc_task_state.xml
[2025-06-06 09:10:23] -rw------- 1 boinc boinc        95 Jun  6 09:09 pilot_heartbeat.json
[2025-06-06 09:10:23] -rw------- 1 boinc boinc      1022 Jun  6 09:09 memory_monitor_summary.json
[2025-06-06 09:10:23] -rw------- 1 boinc boinc    370895 Jun  6 09:09 log.45006595._053518.job.log.tgz.1
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc      8192 Jun  6 09:10 boinc_mmap_file
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc        27 Jun  6 09:10 wrapper_checkpoint.txt
[2025-06-06 09:10:23] -rw------- 1 boinc boinc      7668 Jun  6 09:10 heartbeat.json
[2025-06-06 09:10:23] -rw------- 1 boinc boinc      4555 Jun  6 09:10 pilotlog.txt
[2025-06-06 09:10:23] -rw------- 1 boinc boinc    575502 Jun  6 09:10 log.45006595._053518.job.log.1
[2025-06-06 09:10:23] -rw------- 1 boinc boinc       357 Jun  6 09:10 output.list
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc       620 Jun  6 09:10 runtime_log
[2025-06-06 09:10:23] -rw------- 1 boinc boinc    962560 Jun  6 09:10 result.tar.gz
[2025-06-06 09:10:23] -rw------- 1 boinc boinc       647 Jun  6 09:10 s6PODmtovg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPnaKDmOvHCFm.diag
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc      8726 Jun  6 09:10 runtime_log.err
[2025-06-06 09:10:23] -rw-r--r-- 1 boinc boinc     21837 Jun  6 09:10 stderr.txt
[2025-06-06 09:10:23] HITS file was successfully produced:
[2025-06-06 09:10:23] -rw------- 1 boinc boinc 177108341 Jun  6 09:09 shared/HITS.pool.root.1
[2025-06-06 09:10:23]  *** Contents of shared directory: ***
[2025-06-06 09:10:23] total 382416
[2025-06-06 09:10:23] -rw-r--r-- 2 boinc boinc 212983196 Jun  6 07:30 ATLAS.root_0
[2025-06-06 09:10:23] -rw-r--r-- 2 boinc boinc    508887 Jun  6 07:30 input.tar.gz
[2025-06-06 09:10:23] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:30 start_atlas.sh
[2025-06-06 09:10:23] -rw------- 1 boinc boinc 177108341 Jun  6 09:09 HITS.pool.root.1
[2025-06-06 09:10:23] -rw------- 1 boinc boinc    962560 Jun  6 09:10 result.tar.gz
09:10:24 (2031506): run_atlas exited; CPU time 47805.046961
09:10:24 (2031506): called boinc_finish(0)

</stderr_txt>
]]>

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