Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:35:16 (2272249): wrapper (7.7.26015): starting
11:35:16 (2272249): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 11:35:16] Arguments: --nthreads 12
[2025-06-06 11:35:16] Threads: 12
[2025-06-06 11:35:16] Checking for CVMFS
[2025-06-06 11:35:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:35:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:35:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:35:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:35:17] 2.12.7.0 3695 2296 53816 146854 3 187 2167882 4096000 2736 130560 0 6264843 99.997 554171 133 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 11:35:17] CVMFS is ok
[2025-06-06 11:35:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:35:17] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 11:35:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 11:35:17] Further information can be found at the LHC@home message board.
[2025-06-06 11:35:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:35:17] Checking for apptainer binary...
[2025-06-06 11:35:17] apptainer is not installed, using version from CVMFS
[2025-06-06 11:35:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:35:17] dualxeon2
[2025-06-06 11:35:17] apptainer works
[2025-06-06 11:35:17] Set ATHENA_PROC_NUMBER=12
[2025-06-06 11:35:17] Set ATHENA_CORE_NUMBER=12
[2025-06-06 11:35:17] Starting ATLAS job with PandaID=6678363349
[2025-06-06 11:35:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:09:41]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:09:41]  filetype=log
[2025-06-06 13:09:41]  guid=7021fc09-91a1-488d-a259-5405abe88b2b
[2025-06-06 13:09:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 13:09:41]  is_altstaged=None
[2025-06-06 13:09:41]  is_tar=False
[2025-06-06 13:09:41]  lfn=log.45006595._053389.job.log.tgz.1
[2025-06-06 13:09:41]  mtime=0
[2025-06-06 13:09:41]  protocol_id=None
[2025-06-06 13:09:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 13:09:41]  replicas=None
[2025-06-06 13:09:41]  scope=mc23_13p6TeV
[2025-06-06 13:09:41]  status=None
[2025-06-06 13:09:41]  status_code=0
[2025-06-06 13:09:41]  storage_token=
[2025-06-06 13:09:41]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6678363349/log.45006595._053389.job.log.tgz.1
[2025-06-06 13:09:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/fc/log.45006595._053389.job.log.tgz.1
[2025-06-06 13:09:41]  workdir=None
[2025-06-06 13:09:41] ]
[2025-06-06 13:09:41] 2025-06-06 13:09:17,400 | INFO     | transferring file log.45006595._053389.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6678363349/log.45006595._053389.job.log.tgz.1 to /var/lib/boinc
[2025-06-06 13:09:41] 2025-06-06 13:09:17,400 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6678363349/log.45006595._053389.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-06 13:09:41] 2025-06-06 13:09:17,417 | INFO     | adding to output.list: log.45006595._053389.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/fc/log.45006595._053389.job.log.tg
[2025-06-06 13:09:41] 2025-06-06 13:09:17,417 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 13:09:41] 2025-06-06 13:09:17,418 | INFO     | summary of transferred files:
[2025-06-06 13:09:41] 2025-06-06 13:09:17,418 | INFO     |  -- lfn=log.45006595._053389.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 13:09:41] 2025-06-06 13:09:17,418 | INFO     | stage-out finished correctly
[2025-06-06 13:09:41] 2025-06-06 13:09:18,838 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 13:09:41] 2025-06-06 13:09:19,284 | INFO     | job 6678363349 has state=finished
[2025-06-06 13:09:41] 2025-06-06 13:09:19,285 | INFO     | preparing for final server update for job 6678363349 in state='finished'
[2025-06-06 13:09:41] 2025-06-06 13:09:19,285 | INFO     | this job has now completed (state=finished)
[2025-06-06 13:09:41] 2025-06-06 13:09:19,285 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 13:09:41] 2025-06-06 13:09:19,286 | INFO     | log transfer has been attempted: DONE
[2025-06-06 13:09:41] 2025-06-06 13:09:19,286 | INFO     | job 6678363349 has finished - writing final server update
[2025-06-06 13:09:41] 2025-06-06 13:09:19,286 | INFO     | total number of processed events: 400 (read)
[2025-06-06 13:09:41] 2025-06-06 13:09:19,289 | INFO     | executing command: lscpu
[2025-06-06 13:09:41] 2025-06-06 13:09:19,329 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 13:09:41] 2025-06-06 13:09:19,521 | INFO     | monitor loop #413: job 0:6678363349 is in state 'finished'
[2025-06-06 13:09:41] 2025-06-06 13:09:19,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 13:09:41] 2025-06-06 13:09:22,024 | INFO     | monitor loop #414: job 0:6678363349 is in state 'finished'
[2025-06-06 13:09:41] 2025-06-06 13:09:22,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 13:09:41] 2025-06-06 13:09:22,647 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 13:09:41] 2025-06-06 13:09:22,647 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678363349/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 13:09:41] 2025-06-06 13:09:22,648 | INFO     | extracted standard info from prmon json
[2025-06-06 13:09:41] 2025-06-06 13:09:22,648 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 13:09:41] 2025-06-06 13:09:22,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 13:09:41] 2025-06-06 13:09:22,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 13:09:41] 2025-06-06 13:09:22,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 13:09:41] 2025-06-06 13:09:22,652 | INFO     | fitting pss+swap vs Time
[2025-06-06 13:09:41] 2025-06-06 13:09:22,652 | INFO     | sum of square deviations: 190403570.0
[2025-06-06 13:09:41] 2025-06-06 13:09:22,652 | INFO     | sum of deviations: -549991737.9999999
[2025-06-06 13:09:41] 2025-06-06 13:09:22,653 | INFO     | mean x: 1749212638.0
[2025-06-06 13:09:41] 2025-06-06 13:09:22,653 | INFO     | mean y: 2666956.305882353
[2025-06-06 13:09:41] 2025-06-06 13:09:22,653 | INFO     | -- intersect: 5055368956.090785
[2025-06-06 13:09:41] 2025-06-06 13:09:22,653 | INFO     | intersect: 5055368956.090785
[2025-06-06 13:09:41] 2025-06-06 13:09:22,653 | INFO     | chi2: 0.03796602471437452
[2025-06-06 13:09:41] 2025-06-06 13:09:22,653 | INFO     | -- intersect: 5055368956.090785
[2025-06-06 13:09:41] 2025-06-06 13:09:22,654 | INFO     | current memory leak: -2.89 B/s (using 85 data points, chi2=0.04)
[2025-06-06 13:09:41] 2025-06-06 13:09:22,654 | INFO     | ..............................
[2025-06-06 13:09:41] 2025-06-06 13:09:22,654 | INFO     | . Timing measurements:
[2025-06-06 13:09:41] 2025-06-06 13:09:22,654 | INFO     | . get job = 0 s
[2025-06-06 13:09:41] 2025-06-06 13:09:22,654 | INFO     | . initial setup = 2 s
[2025-06-06 13:09:41] 2025-06-06 13:09:22,654 | INFO     | . payload setup = 11 s
[2025-06-06 13:09:41] 2025-06-06 13:09:22,655 | INFO     | . stage-in = 0 s
[2025-06-06 13:09:41] 2025-06-06 13:09:22,655 | INFO     | . payload execution = 5589 s
[2025-06-06 13:09:41] 2025-06-06 13:09:22,655 | INFO     | . stage-out = 0 s
[2025-06-06 13:09:41] 2025-06-06 13:09:22,655 | INFO     | . log creation = 0 s
[2025-06-06 13:09:41] 2025-06-06 13:09:22,655 | INFO     | ..............................
[2025-06-06 13:09:41] 2025-06-06 13:09:22,769 | INFO     | 
[2025-06-06 13:09:41] 2025-06-06 13:09:22,769 | INFO     | job summary report
[2025-06-06 13:09:41] 2025-06-06 13:09:22,769 | INFO     | --------------------------------------------------
[2025-06-06 13:09:41] 2025-06-06 13:09:22,769 | INFO     | PanDA job id: 6678363349
[2025-06-06 13:09:41] 2025-06-06 13:09:22,770 | INFO     | task id: 45006595
[2025-06-06 13:09:41] 2025-06-06 13:09:22,773 | INFO     | errors: (none)
[2025-06-06 13:09:41] 2025-06-06 13:09:22,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:09:41] 2025-06-06 13:09:22,773 | INFO     | pilot state: finished 
[2025-06-06 13:09:41] 2025-06-06 13:09:22,773 | INFO     | transexitcode: 0
[2025-06-06 13:09:41] 2025-06-06 13:09:22,773 | INFO     | exeerrorcode: 0
[2025-06-06 13:09:41] 2025-06-06 13:09:22,774 | INFO     | exeerrordiag: 
[2025-06-06 13:09:41] 2025-06-06 13:09:22,774 | INFO     | exitcode: 0
[2025-06-06 13:09:41] 2025-06-06 13:09:22,774 | INFO     | exitmsg: OK
[2025-06-06 13:09:41] 2025-06-06 13:09:22,774 | INFO     | cpuconsumptiontime: 45419 s
[2025-06-06 13:09:41] 2025-06-06 13:09:22,774 | INFO     | nevents: 400
[2025-06-06 13:09:41] 2025-06-06 13:09:22,774 | INFO     | neventsw: 0
[2025-06-06 13:09:41] 2025-06-06 13:09:22,774 | INFO     | pid: 2282699
[2025-06-06 13:09:41] 2025-06-06 13:09:22,774 | INFO     | pgrp: 2282699
[2025-06-06 13:09:41] 2025-06-06 13:09:22,774 | INFO     | corecount: 12
[2025-06-06 13:09:41] 2025-06-06 13:09:22,774 | INFO     | event service: False
[2025-06-06 13:09:41] 2025-06-06 13:09:22,775 | INFO     | sizes: {0: 2396514, 1: 2397377, 2: 2397377, 8: 2397611, 12: 2397639, 5604: 2424139, 5605: 2433277, 5607: 2433277, 5611: 2433447}
[2025-06-06 13:09:41] 2025-06-06 13:09:22,775 | INFO     | --------------------------------------------------
[2025-06-06 13:09:41] 2025-06-06 13:09:22,775 | INFO     | 
[2025-06-06 13:09:41] 2025-06-06 13:09:22,775 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 13:09:41] 2025-06-06 13:09:22,792 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,792 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,793 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,793 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,793 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,793 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,793 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,794 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,794 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,794 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,794 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,794 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,794 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:09:41] 2025-06-06 13:09:22,795 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,795 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:09:41] 2025-06-06 13:09:22,795 | INFO     | job 6678363349 has completed (purged errors)
[2025-06-06 13:09:41] 2025-06-06 13:09:22,795 | INFO     | overall cleanup function is called
[2025-06-06 13:09:41] 2025-06-06 13:09:23,803 | INFO     | --- collectZombieJob: --- 10, [2282699]
[2025-06-06 13:09:41] 2025-06-06 13:09:23,804 | INFO     | zombie collector waiting for pid 2282699
[2025-06-06 13:09:41] 2025-06-06 13:09:23,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:09:41] 2025-06-06 13:09:23,804 | INFO     | collected zombie processes
[2025-06-06 13:09:41] 2025-06-06 13:09:23,804 | INFO     | will attempt to kill all subprocesses of pid=2282699
[2025-06-06 13:09:41] 2025-06-06 13:09:23,976 | INFO     | process IDs to be killed: [2282699] (in reverse order)
[2025-06-06 13:09:41] 2025-06-06 13:09:24,030 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:09:41] 2025-06-06 13:09:24,030 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:09:41] 2025-06-06 13:09:24,034 | INFO     | did not find any defunct processes belonging to 2282699
[2025-06-06 13:09:41] 2025-06-06 13:09:24,038 | INFO     | did not find any defunct processes belonging to 2282699
[2025-06-06 13:09:41] 2025-06-06 13:09:24,038 | INFO     | ready for new job
[2025-06-06 13:09:41] 2025-06-06 13:09:24,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:09:41] 2025-06-06 13:09:24,040 | INFO     | **************************************
[2025-06-06 13:09:41] 2025-06-06 13:09:24,040 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:09:41] 2025-06-06 13:09:24,040 | INFO     | **************************************
[2025-06-06 13:09:41] 2025-06-06 13:09:24,040 | INFO     | 
[2025-06-06 13:09:41] 2025-06-06 13:09:24,042 | INFO     | architecture information:
[2025-06-06 13:09:41] 2025-06-06 13:09:24,043 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:09:41] 2025-06-06 13:09:24,054 | INFO     | cat /etc/os-release:
[2025-06-06 13:09:41] NAME="CentOS Linux"
[2025-06-06 13:09:41] VERSION="7 (Core)"
[2025-06-06 13:09:41] ID="centos"
[2025-06-06 13:09:41] ID_LIKE="rhel fedora"
[2025-06-06 13:09:41] VERSION_ID="7"
[2025-06-06 13:09:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:09:41] ANSI_COLOR="0;31"
[2025-06-06 13:09:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:09:41] HOME_URL="https://www.centos.org/"
[2025-06-06 13:09:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:09:41] 
[2025-06-06 13:09:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:09:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:09:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:09:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:09:41] 
[2025-06-06 13:09:41] 2025-06-06 13:09:24,054 | INFO     | **************************************
[2025-06-06 13:09:41] 2025-06-06 13:09:24,557 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 13:09:41] 2025-06-06 13:09:24,573 | INFO     | sufficient remaining disk space (98952019968 B)
[2025-06-06 13:09:41] 2025-06-06 13:09:24,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:09:41] 2025-06-06 13:09:24,573 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:09:41] 2025-06-06 13:09:24,573 | INFO     | update_server=False
[2025-06-06 13:09:41] 2025-06-06 13:09:24,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:09:41] 2025-06-06 13:09:24,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:09:41] 2025-06-06 13:09:24,574 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 13:09:41] 2025-06-06 13:09:24,574 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:09:41] 2025-06-06 13:09:24,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:09:41] 2025-06-06 13:09:24,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:09:41] 2025-06-06 13:09:24,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:09:41] 2025-06-06 13:09:25,255 | INFO     | all job control threads have been joined
[2025-06-06 13:09:41] 2025-06-06 13:09:25,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:09:41] 2025-06-06 13:09:25,532 | INFO     | aborting loop
[2025-06-06 13:09:41] 2025-06-06 13:09:25,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:09:41] 2025-06-06 13:09:25,579 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:25,579 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:25,603 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:25,645 | INFO     | all data control threads have been joined
[2025-06-06 13:09:41] 2025-06-06 13:09:25,714 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:25,757 | INFO     | all payload control threads have been joined
[2025-06-06 13:09:41] 2025-06-06 13:09:26,260 | INFO     | [job] control thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:26,441 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:26,506 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:26,537 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:26,562 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:26,651 | INFO     | [data] control thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:26,696 | INFO     | [job] validate thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:26,762 | INFO     | [payload] control thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:26,776 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:27,542 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:28,953 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:35,193 | INFO     | job.realtimelogging is not enabled
[2025-06-06 13:09:41] 2025-06-06 13:09:36,198 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:09:41] 2025-06-06 13:09:36,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128921780717376)>', '<ExcThread(monitor, started 128921018296064)>']
[2025-06-06 13:09:41] 2025-06-06 13:09:36,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:09:41] 2025-06-06 13:09:36,629 | INFO     | [monitor] control thread has ended
[2025-06-06 13:09:41] 2025-06-06 13:09:41,542 | INFO     | all workflow threads have been joined
[2025-06-06 13:09:41] 2025-06-06 13:09:41,542 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:09:41] 2025-06-06 13:09:41,542 | INFO     | traces error code: 0
[2025-06-06 13:09:41] 2025-06-06 13:09:41,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:09:41] 2025-06-06 13:09:41,643 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:09:41] 2025-06-06 13:09:41,646 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:09:41] 2025-06-06 13:09:41,649 [wrapper] pilotpid: 2276000
[2025-06-06 13:09:41] 2025-06-06 13:09:41,651 [wrapper] Pilot exit status: 0
[2025-06-06 13:09:41] 2025-06-06 13:09:41,660 [wrapper] pandaids: 6678363349
[2025-06-06 13:09:41] 2025-06-06 13:09:41,692 [wrapper] cleanup supervisor_pilot 2351992 2276001
[2025-06-06 13:09:41] 2025-06-06 13:09:41,695 [wrapper] Test setup, not cleaning
[2025-06-06 13:09:41] 2025-06-06 13:09:41,697 [wrapper] apfmon messages muted
[2025-06-06 13:09:41] 2025-06-06 13:09:41,700 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:09:41] 2025-06-06 13:09:41,702 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:09:41]  *** Error codes and diagnostics ***
[2025-06-06 13:09:41]     "exeErrorCode": 0,
[2025-06-06 13:09:41]     "exeErrorDiag": "",
[2025-06-06 13:09:41]     "pilotErrorCode": 0,
[2025-06-06 13:09:41]     "pilotErrorDiag": "",
[2025-06-06 13:09:41]  *** Listing of results directory ***
[2025-06-06 13:09:41] total 386008
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:22 queuedata.json
[2025-06-06 13:09:41] -rwx------ 1 boinc boinc     37140 Jun  4 05:23 runpilot2-wrapper.sh
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc       100 Jun  6 11:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:09:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 11:35 run_atlas
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc       105 Jun  6 11:35 job.xml
[2025-06-06 13:09:41] -rw-r--r-- 2 boinc boinc 215042559 Jun  6 11:35 EVNT.45006593._002137.pool.root.1
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc      6557 Jun  6 11:35 init_data.xml
[2025-06-06 13:09:41] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:35 start_atlas.sh
[2025-06-06 13:09:41] drwxrwx--x 2 boinc boinc      4096 Jun  6 11:35 shared
[2025-06-06 13:09:41] -rw-r--r-- 2 boinc boinc    508883 Jun  6 11:35 input.tar.gz
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc         0 Jun  6 11:35 boinc_lockfile
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc      2525 Jun  6 11:35 pandaJob.out
[2025-06-06 13:09:41] -rw------- 1 boinc boinc    985732 Jun  6 11:35 agis_schedconf.cvmfs.json
[2025-06-06 13:09:41] -rw------- 1 boinc boinc   1598969 Jun  6 11:35 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:09:41] drwx------ 4 boinc boinc      4096 Jun  6 11:35 pilot3
[2025-06-06 13:09:41] -rw------- 1 boinc boinc 174578930 Jun  6 13:08 HITS.45006595._053389.pool.root.1
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc       530 Jun  6 13:08 boinc_task_state.xml
[2025-06-06 13:09:41] -rw------- 1 boinc boinc      1034 Jun  6 13:09 memory_monitor_summary.json
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc        27 Jun  6 13:09 wrapper_checkpoint.txt
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc      8192 Jun  6 13:09 boinc_mmap_file
[2025-06-06 13:09:41] -rw------- 1 boinc boinc    363952 Jun  6 13:09 log.45006595._053389.job.log.tgz.1
[2025-06-06 13:09:41] -rw------- 1 boinc boinc        95 Jun  6 13:09 pilot_heartbeat.json
[2025-06-06 13:09:41] -rw------- 1 boinc boinc      7666 Jun  6 13:09 heartbeat.json
[2025-06-06 13:09:41] -rw------- 1 boinc boinc      4555 Jun  6 13:09 pilotlog.txt
[2025-06-06 13:09:41] -rw------- 1 boinc boinc    546001 Jun  6 13:09 log.45006595._053389.job.log.1
[2025-06-06 13:09:41] -rw------- 1 boinc boinc       357 Jun  6 13:09 output.list
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc       620 Jun  6 13:09 runtime_log
[2025-06-06 13:09:41] -rw------- 1 boinc boinc    931840 Jun  6 13:09 result.tar.gz
[2025-06-06 13:09:41] -rw------- 1 boinc boinc       647 Jun  6 13:09 cyZLDmnlvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGOnKDmJLdarm.diag
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc      8726 Jun  6 13:09 runtime_log.err
[2025-06-06 13:09:41] -rw-r--r-- 1 boinc boinc     21336 Jun  6 13:09 stderr.txt
[2025-06-06 13:09:41] HITS file was successfully produced:
[2025-06-06 13:09:41] -rw------- 1 boinc boinc 174578930 Jun  6 13:08 shared/HITS.pool.root.1
[2025-06-06 13:09:41]  *** Contents of shared directory: ***
[2025-06-06 13:09:41] total 381924
[2025-06-06 13:09:41] -rw-r--r-- 2 boinc boinc 215042559 Jun  6 11:35 ATLAS.root_0
[2025-06-06 13:09:41] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:35 start_atlas.sh
[2025-06-06 13:09:41] -rw-r--r-- 2 boinc boinc    508883 Jun  6 11:35 input.tar.gz
[2025-06-06 13:09:41] -rw------- 1 boinc boinc 174578930 Jun  6 13:08 HITS.pool.root.1
[2025-06-06 13:09:41] -rw------- 1 boinc boinc    931840 Jun  6 13:09 result.tar.gz
13:09:43 (2272249): run_atlas exited; CPU time 45476.999086
13:09:43 (2272249): called boinc_finish(0)

</stderr_txt>
]]>

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