Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:00:52 (2549195): wrapper (7.7.26015): starting
07:00:52 (2549195): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 07:00:52] Arguments: --nthreads 12
[2025-06-04 07:00:52] Threads: 12
[2025-06-04 07:00:52] Checking for CVMFS
[2025-06-04 07:00:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:00:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:00:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:00:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:00:53] 2.12.6.0 5533 31417 469104 146777 0 449 22987172 32935936 3757 16776704 1 129671298 99.634 117670717 31788 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:00:53] CVMFS is ok
[2025-06-04 07:00:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:00:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:00:53] Further information can be found at the LHC@home message board.
[2025-06-04 07:00:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:00:53] Checking for apptainer binary...
[2025-06-04 07:00:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:00:53] Running /usr/bin/apptainer --version
[2025-06-04 07:00:53] apptainer version 1.4.1-1.el9
[2025-06-04 07:00:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:00:53] c6-2-29-3.aglt2.org
[2025-06-04 07:00:53] apptainer works
[2025-06-04 07:00:53] Set ATHENA_PROC_NUMBER=12
[2025-06-04 07:00:53] Set ATHENA_CORE_NUMBER=12
[2025-06-04 07:00:53] Starting ATLAS job with PandaID=6678363317
[2025-06-04 07:00:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:39:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:39:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 07:39:42]  is_altstaged=None
[2025-06-04 07:39:42]  is_tar=False
[2025-06-04 07:39:42]  lfn=log.45006595._053357.job.log.tgz.1
[2025-06-04 07:39:42]  mtime=0
[2025-06-04 07:39:42]  protocol_id=None
[2025-06-04 07:39:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:39:42]  replicas=None
[2025-06-04 07:39:42]  scope=mc23_13p6TeV
[2025-06-04 07:39:42]  status=None
[2025-06-04 07:39:42]  status_code=0
[2025-06-04 07:39:42]  storage_token=
[2025-06-04 07:39:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678363317/log.45006595._053357.job.log.tgz.1
[2025-06-04 07:39:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/14/log.45006595._053357.job.log.tgz.1
[2025-06-04 07:39:42]  workdir=None
[2025-06-04 07:39:42] ]
[2025-06-04 07:39:42] 2025-06-04 11:39:16,659 | INFO     | transferring file log.45006595._053357.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678363317/log.45006595._053357.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:39:42] 2025-06-04 11:39:16,660 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678363317/log.45006595._053357.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053357.job
[2025-06-04 07:39:42] 2025-06-04 11:39:16,679 | INFO     | adding to output.list: log.45006595._053357.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/14/log.45006595._053357.job.log.tg
[2025-06-04 07:39:42] 2025-06-04 11:39:16,680 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:39:42] 2025-06-04 11:39:16,680 | INFO     | summary of transferred files:
[2025-06-04 07:39:42] 2025-06-04 11:39:16,680 | INFO     |  -- lfn=log.45006595._053357.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:39:42] 2025-06-04 11:39:16,680 | INFO     | stage-out finished correctly
[2025-06-04 07:39:42] 2025-06-04 11:39:16,728 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:39:42] 2025-06-04 11:39:16,783 | INFO     | job 6678363317 has state=finished
[2025-06-04 07:39:42] 2025-06-04 11:39:16,783 | INFO     | preparing for final server update for job 6678363317 in state='finished'
[2025-06-04 07:39:42] 2025-06-04 11:39:16,784 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:39:42] 2025-06-04 11:39:16,784 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:39:42] 2025-06-04 11:39:16,784 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:39:42] 2025-06-04 11:39:16,784 | INFO     | job 6678363317 has finished - writing final server update
[2025-06-04 07:39:42] 2025-06-04 11:39:16,784 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:39:42] 2025-06-04 11:39:16,802 | INFO     | executing command: lscpu
[2025-06-04 07:39:42] 2025-06-04 11:39:16,877 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:39:42] 2025-06-04 11:39:17,669 | INFO     | monitor loop #178: job 0:6678363317 is in state 'finished'
[2025-06-04 07:39:42] 2025-06-04 11:39:17,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:39:42] 2025-06-04 11:39:20,173 | INFO     | monitor loop #179: job 0:6678363317 is in state 'finished'
[2025-06-04 07:39:42] 2025-06-04 11:39:20,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:39:42] 2025-06-04 11:39:21,605 | INFO     | PID=2552843 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 07:39:42] 2025-06-04 11:39:21,605 | INFO     | .. there are 8 such processes running
[2025-06-04 07:39:42] 2025-06-04 11:39:22,067 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 07:39:42] 2025-06-04 11:39:22,067 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678363317/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:39:42] 2025-06-04 11:39:22,069 | INFO     | extracted standard info from prmon json
[2025-06-04 07:39:42] 2025-06-04 11:39:22,069 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:39:42] 2025-06-04 11:39:22,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:39:42] 2025-06-04 11:39:22,069 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:39:42] 2025-06-04 11:39:22,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:39:42] 2025-06-04 11:39:22,071 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:39:42] 2025-06-04 11:39:22,072 | INFO     | sum of square deviations: 8362947.5
[2025-06-04 07:39:42] 2025-06-04 11:39:22,072 | INFO     | sum of deviations: 3636112522.000001
[2025-06-04 07:39:42] 2025-06-04 11:39:22,072 | INFO     | mean x: 1749036087.5
[2025-06-04 07:39:42] 2025-06-04 11:39:22,072 | INFO     | mean y: 2265432.7333333334
[2025-06-04 07:39:42] 2025-06-04 11:39:22,072 | INFO     | -- intersect: -760458328058.8125
[2025-06-04 07:39:42] 2025-06-04 11:39:22,073 | INFO     | intersect: -760458328058.8125
[2025-06-04 07:39:42] 2025-06-04 11:39:22,073 | INFO     | chi2: 0.8882039768744385
[2025-06-04 07:39:42] 2025-06-04 11:39:22,073 | INFO     | -- intersect: -760458328058.8125
[2025-06-04 07:39:42] 2025-06-04 11:39:22,073 | INFO     | current memory leak: 434.79 B/s (using 30 data points, chi2=0.89)
[2025-06-04 07:39:42] 2025-06-04 11:39:22,074 | INFO     | ..............................
[2025-06-04 07:39:42] 2025-06-04 11:39:22,074 | INFO     | . Timing measurements:
[2025-06-04 07:39:42] 2025-06-04 11:39:22,074 | INFO     | . get job = 0 s
[2025-06-04 07:39:42] 2025-06-04 11:39:22,074 | INFO     | . initial setup = 2 s
[2025-06-04 07:39:42] 2025-06-04 11:39:22,074 | INFO     | . payload setup = 8 s
[2025-06-04 07:39:42] 2025-06-04 11:39:22,074 | INFO     | . stage-in = 0 s
[2025-06-04 07:39:42] 2025-06-04 11:39:22,075 | INFO     | . payload execution = 2260 s
[2025-06-04 07:39:42] 2025-06-04 11:39:22,075 | INFO     | . stage-out = 0 s
[2025-06-04 07:39:42] 2025-06-04 11:39:22,075 | INFO     | . log creation = 0 s
[2025-06-04 07:39:42] 2025-06-04 11:39:22,075 | INFO     | ..............................
[2025-06-04 07:39:42] 2025-06-04 11:39:22,125 | INFO     | 
[2025-06-04 07:39:42] 2025-06-04 11:39:22,125 | INFO     | job summary report
[2025-06-04 07:39:42] 2025-06-04 11:39:22,125 | INFO     | --------------------------------------------------
[2025-06-04 07:39:42] 2025-06-04 11:39:22,125 | INFO     | PanDA job id: 6678363317
[2025-06-04 07:39:42] 2025-06-04 11:39:22,126 | INFO     | task id: 45006595
[2025-06-04 07:39:42] 2025-06-04 11:39:22,126 | INFO     | errors: (none)
[2025-06-04 07:39:42] 2025-06-04 11:39:22,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:39:42] 2025-06-04 11:39:22,126 | INFO     | pilot state: finished 
[2025-06-04 07:39:42] 2025-06-04 11:39:22,126 | INFO     | transexitcode: 0
[2025-06-04 07:39:42] 2025-06-04 11:39:22,126 | INFO     | exeerrorcode: 0
[2025-06-04 07:39:42] 2025-06-04 11:39:22,126 | INFO     | exeerrordiag: 
[2025-06-04 07:39:42] 2025-06-04 11:39:22,126 | INFO     | exitcode: 0
[2025-06-04 07:39:42] 2025-06-04 11:39:22,127 | INFO     | exitmsg: OK
[2025-06-04 07:39:42] 2025-06-04 11:39:22,127 | INFO     | cpuconsumptiontime: 19547 s
[2025-06-04 07:39:42] 2025-06-04 11:39:22,127 | INFO     | nevents: 400
[2025-06-04 07:39:42] 2025-06-04 11:39:22,127 | INFO     | neventsw: 0
[2025-06-04 07:39:42] 2025-06-04 11:39:22,127 | INFO     | pid: 2563565
[2025-06-04 07:39:42] 2025-06-04 11:39:22,127 | INFO     | pgrp: 2563565
[2025-06-04 07:39:42] 2025-06-04 11:39:22,127 | INFO     | corecount: 12
[2025-06-04 07:39:42] 2025-06-04 11:39:22,127 | INFO     | event service: False
[2025-06-04 07:39:42] 2025-06-04 11:39:22,128 | INFO     | sizes: {0: 2405184, 6: 2405390, 11: 2405418, 2272: 2430310, 2273: 2439307, 2278: 2439421}
[2025-06-04 07:39:42] 2025-06-04 11:39:22,128 | INFO     | --------------------------------------------------
[2025-06-04 07:39:42] 2025-06-04 11:39:22,128 | INFO     | 
[2025-06-04 07:39:42] 2025-06-04 11:39:22,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:39:42] 2025-06-04 11:39:22,153 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,154 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,154 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,154 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,156 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:39:42] 2025-06-04 11:39:22,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,156 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:39:42] 2025-06-04 11:39:22,156 | INFO     | job 6678363317 has completed (purged errors)
[2025-06-04 07:39:42] 2025-06-04 11:39:22,157 | INFO     | overall cleanup function is called
[2025-06-04 07:39:42] 2025-06-04 11:39:23,166 | INFO     | --- collectZombieJob: --- 10, [2563565]
[2025-06-04 07:39:42] 2025-06-04 11:39:23,167 | INFO     | zombie collector waiting for pid 2563565
[2025-06-04 07:39:42] 2025-06-04 11:39:23,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:39:42] 2025-06-04 11:39:23,167 | INFO     | collected zombie processes
[2025-06-04 07:39:42] 2025-06-04 11:39:23,167 | INFO     | will attempt to kill all subprocesses of pid=2563565
[2025-06-04 07:39:42] 2025-06-04 11:39:23,303 | INFO     | process IDs to be killed: [2563565] (in reverse order)
[2025-06-04 07:39:42] 2025-06-04 11:39:23,367 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:39:42] 2025-06-04 11:39:23,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:39:42] 2025-06-04 11:39:23,380 | INFO     | did not find any defunct processes belonging to 2563565
[2025-06-04 07:39:42] 2025-06-04 11:39:23,386 | INFO     | did not find any defunct processes belonging to 2563565
[2025-06-04 07:39:42] 2025-06-04 11:39:23,387 | INFO     | ready for new job
[2025-06-04 07:39:42] 2025-06-04 11:39:23,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:39:42] 2025-06-04 11:39:23,388 | INFO     | **************************************
[2025-06-04 07:39:42] 2025-06-04 11:39:23,388 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:39:42] 2025-06-04 11:39:23,388 | INFO     | **************************************
[2025-06-04 07:39:42] 2025-06-04 11:39:23,388 | INFO     | 
[2025-06-04 07:39:42] 2025-06-04 11:39:23,403 | INFO     | architecture information:
[2025-06-04 07:39:42] 2025-06-04 11:39:23,403 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:39:42] 2025-06-04 11:39:23,420 | INFO     | cat /etc/os-release:
[2025-06-04 07:39:42] NAME="CentOS Linux"
[2025-06-04 07:39:42] VERSION="7 (Core)"
[2025-06-04 07:39:42] ID="centos"
[2025-06-04 07:39:42] ID_LIKE="rhel fedora"
[2025-06-04 07:39:42] VERSION_ID="7"
[2025-06-04 07:39:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:39:42] ANSI_COLOR="0;31"
[2025-06-04 07:39:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:39:42] HOME_URL="https://www.centos.org/"
[2025-06-04 07:39:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:39:42] 
[2025-06-04 07:39:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:39:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:39:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:39:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:39:42] 
[2025-06-04 07:39:42] 2025-06-04 11:39:23,420 | INFO     | **************************************
[2025-06-04 07:39:42] 2025-06-04 11:39:23,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:39:42] 2025-06-04 11:39:23,942 | INFO     | sufficient remaining disk space (76370935808 B)
[2025-06-04 07:39:42] 2025-06-04 11:39:23,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:39:42] 2025-06-04 11:39:23,942 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:39:42] 2025-06-04 11:39:23,942 | INFO     | update_server=False
[2025-06-04 07:39:42] 2025-06-04 11:39:23,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:39:42] 2025-06-04 11:39:23,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:39:42] 2025-06-04 11:39:23,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:39:42] 2025-06-04 11:39:23,944 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:39:42] 2025-06-04 11:39:23,944 | INFO     | aborting loop
[2025-06-04 07:39:42] 2025-06-04 11:39:23,945 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:39:42] 2025-06-04 11:39:23,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:39:42] 2025-06-04 11:39:23,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:39:42] 2025-06-04 11:39:24,039 | INFO     | all job control threads have been joined
[2025-06-04 07:39:42] 2025-06-04 11:39:24,334 | INFO     | all payload control threads have been joined
[2025-06-04 07:39:42] 2025-06-04 11:39:24,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:39:42] 2025-06-04 11:39:24,838 | INFO     | all data control threads have been joined
[2025-06-04 07:39:42] 2025-06-04 11:39:24,948 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:24,949 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:24,950 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:25,044 | INFO     | [job] control thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:25,225 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:25,339 | INFO     | [payload] control thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:25,405 | INFO     | [job] validate thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:25,530 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:25,650 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:25,843 | INFO     | [data] control thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:26,110 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:26,177 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:26,420 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:26,745 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:27,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:39:42] 2025-06-04 11:39:31,295 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:34,930 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:39:42] 2025-06-04 11:39:35,936 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:39:42] 2025-06-04 11:39:37,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081892599616)>', '<ExcThread(monitor, started 140081398527744)>']
[2025-06-04 07:39:42] 2025-06-04 11:39:38,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:39:42] 2025-06-04 11:39:38,017 | INFO     | [monitor] control thread has ended
[2025-06-04 07:39:42] 2025-06-04 11:39:42,383 | INFO     | all workflow threads have been joined
[2025-06-04 07:39:42] 2025-06-04 11:39:42,384 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:39:42] 2025-06-04 11:39:42,384 | INFO     | traces error code: 0
[2025-06-04 07:39:42] 2025-06-04 11:39:42,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:39:42] 2025-06-04 11:39:42,483 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:39:42] 2025-06-04 11:39:42,488 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:39:42] 2025-06-04 11:39:42,493 [wrapper] pilotpid: 2552843
[2025-06-04 07:39:42] 2025-06-04 11:39:42,498 [wrapper] Pilot exit status: 0
[2025-06-04 07:39:42] 2025-06-04 11:39:42,515 [wrapper] pandaids: 6678363317
[2025-06-04 07:39:42] 2025-06-04 11:39:42,563 [wrapper] cleanup supervisor_pilot 2610311 2552844
[2025-06-04 07:39:42] 2025-06-04 11:39:42,568 [wrapper] Test setup, not cleaning
[2025-06-04 07:39:42] 2025-06-04 11:39:42,573 [wrapper] apfmon messages muted
[2025-06-04 07:39:42] 2025-06-04 11:39:42,578 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:39:42] 2025-06-04 11:39:42,583 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:39:42]  *** Error codes and diagnostics ***
[2025-06-04 07:39:42]     "exeErrorCode": 0,
[2025-06-04 07:39:42]     "exeErrorDiag": "",
[2025-06-04 07:39:42]     "pilotErrorCode": 0,
[2025-06-04 07:39:42]     "pilotErrorDiag": "",
[2025-06-04 07:39:42]  *** Listing of results directory ***
[2025-06-04 07:39:42] total 393632
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:22 queuedata.json
[2025-06-04 07:39:42] -rwx------. 1 boincer umatlas     37140 Jun  4 01:23 runpilot2-wrapper.sh
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:39:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:00 run_atlas
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:00 job.xml
[2025-06-04 07:39:42] -rw-r--r--. 2 boincer umatlas 216690560 Jun  4 07:00 EVNT.45006593._002135.pool.root.1
[2025-06-04 07:39:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:00 start_atlas.sh
[2025-06-04 07:39:42] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:00 shared
[2025-06-04 07:39:42] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 07:00 input.tar.gz
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:00 boinc_lockfile
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:00 pandaJob.out
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas    986812 Jun  4 07:01 agis_schedconf.cvmfs.json
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:39:42] drwx------. 4 boincer umatlas      4096 Jun  4 07:01 pilot3
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 07:37 init_data.xml
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas        95 Jun  4 07:38 pilot_heartbeat.json
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas 181339175 Jun  4 07:38 HITS.45006595._053357.pool.root.1
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:38 boinc_task_state.xml
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas      1028 Jun  4 07:39 memory_monitor_summary.json
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas    353693 Jun  4 07:39 log.45006595._053357.job.log.tgz.1
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas      7708 Jun  4 07:39 heartbeat.json
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:39 boinc_mmap_file
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:39 wrapper_checkpoint.txt
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas      4548 Jun  4 07:39 pilotlog.txt
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas    256004 Jun  4 07:39 log.45006595._053357.job.log.1
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas       357 Jun  4 07:39 output.list
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:39 runtime_log
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas    624640 Jun  4 07:39 result.tar.gz
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 07:39 runtime_log.err
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas       650 Jun  4 07:39 QUjKDmnlvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmNnKDmZidOSm.diag
[2025-06-04 07:39:42] -rw-r--r--. 1 boincer umatlas     21418 Jun  4 07:39 stderr.txt
[2025-06-04 07:39:42] HITS file was successfully produced:
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas 181339175 Jun  4 07:38 shared/HITS.pool.root.1
[2025-06-04 07:39:42]  *** Contents of shared directory: ***
[2025-06-04 07:39:42] total 389836
[2025-06-04 07:39:42] -rw-r--r--. 2 boincer umatlas 216690560 Jun  4 07:00 ATLAS.root_0
[2025-06-04 07:39:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:00 start_atlas.sh
[2025-06-04 07:39:42] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 07:00 input.tar.gz
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas 181339175 Jun  4 07:38 HITS.pool.root.1
[2025-06-04 07:39:42] -rw-------. 1 boincer umatlas    624640 Jun  4 07:39 result.tar.gz
07:39:44 (2549195): run_atlas exited; CPU time 19568.131910
07:39:44 (2549195): called boinc_finish(0)

</stderr_txt>
]]>

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