Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:22:49 (2250394): wrapper (7.7.26015): starting
11:22:49 (2250394): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 11:22:49] Arguments: --nthreads 12
[2025-06-06 11:22:49] Threads: 12
[2025-06-06 11:22:49] Checking for CVMFS
[2025-06-06 11:22:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 11:22:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 11:22:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 11:22:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 11:22:50] 2.12.7.0 3695 2283 53308 146854 3 56 2166581 4096001 2736 130560 0 6203508 99.997 554069 133 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 11:22:50] CVMFS is ok
[2025-06-06 11:22:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:22:50] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 11:22:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 11:22:50] Further information can be found at the LHC@home message board.
[2025-06-06 11:22:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:22:50] Checking for apptainer binary...
[2025-06-06 11:22:50] apptainer is not installed, using version from CVMFS
[2025-06-06 11:22:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:22:50] dualxeon2
[2025-06-06 11:22:50] apptainer works
[2025-06-06 11:22:51] Set ATHENA_PROC_NUMBER=12
[2025-06-06 11:22:51] Set ATHENA_CORE_NUMBER=12
[2025-06-06 11:22:51] Starting ATLAS job with PandaID=6678363245
[2025-06-06 11:22:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 13:07:27]  *** The last 200 lines of the pilot log: ***
[2025-06-06 13:07:27] 2025-06-06 13:07:14,682 | INFO     | sum of deviations: 11542147024.999998
[2025-06-06 13:07:27] 2025-06-06 13:07:14,682 | INFO     | mean x: 1749211949.0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,682 | INFO     | mean y: 2627392.6082474226
[2025-06-06 13:07:27] 2025-06-06 13:07:14,682 | INFO     | -- intersect: -71345334305.9368
[2025-06-06 13:07:27] 2025-06-06 13:07:14,682 | INFO     | intersect: -71345334305.9368
[2025-06-06 13:07:27] 2025-06-06 13:07:14,682 | INFO     | chi2: 1.5611029235484577
[2025-06-06 13:07:27] 2025-06-06 13:07:14,682 | INFO     | current chi2=1.5611029235484577 (change=-0.25334580588031397 %)
[2025-06-06 13:07:27] 2025-06-06 13:07:14,683 | INFO     | right removable region: 96
[2025-06-06 13:07:27] 2025-06-06 13:07:14,683 | INFO     | sum of square deviations: 282974608.0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,683 | INFO     | sum of deviations: -4239273202.0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,684 | INFO     | mean x: 1749212254.0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,684 | INFO     | mean y: 2682719.463917526
[2025-06-06 13:07:27] 2025-06-06 13:07:14,684 | INFO     | -- intersect: 26207820648.278423
[2025-06-06 13:07:27] 2025-06-06 13:07:14,684 | INFO     | intersect: 26207820648.278423
[2025-06-06 13:07:27] 2025-06-06 13:07:14,684 | INFO     | chi2: 0.09244414203284496
[2025-06-06 13:07:27] 2025-06-06 13:07:14,684 | INFO     | current chi2=0.09244414203284496 (change=94.06327769992224 %)
[2025-06-06 13:07:27] 2025-06-06 13:07:14,685 | INFO     | sum of square deviations: 241429643.0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,685 | INFO     | sum of deviations: -2899903552.4999995
[2025-06-06 13:07:27] 2025-06-06 13:07:14,685 | INFO     | mean x: 1749212406.5
[2025-06-06 13:07:27] 2025-06-06 13:07:14,685 | INFO     | mean y: 2677494.7282608696
[2025-06-06 13:07:27] 2025-06-06 13:07:14,686 | INFO     | -- intersect: 21013135070.090797
[2025-06-06 13:07:27] 2025-06-06 13:07:14,686 | INFO     | intersect: 21013135070.090797
[2025-06-06 13:07:27] 2025-06-06 13:07:14,686 | INFO     | chi2: 0.0629342980491116
[2025-06-06 13:07:27] 2025-06-06 13:07:14,686 | INFO     | current chi2=0.0629342980491116 (change=31.921810657562972 %)
[2025-06-06 13:07:27] 2025-06-06 13:07:14,686 | INFO     | sum of square deviations: 204163828.0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,687 | INFO     | sum of deviations: 1235116348.9999998
[2025-06-06 13:07:27] 2025-06-06 13:07:14,687 | INFO     | mean x: 1749212559.0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,687 | INFO     | mean y: 2660678.988505747
[2025-06-06 13:07:27] 2025-06-06 13:07:14,687 | INFO     | -- intersect: -10579434350.58268
[2025-06-06 13:07:27] 2025-06-06 13:07:14,687 | INFO     | intersect: -10579434350.58268
[2025-06-06 13:07:27] 2025-06-06 13:07:14,688 | INFO     | chi2: 0.00025973631311757873
[2025-06-06 13:07:27] 2025-06-06 13:07:14,688 | INFO     | current chi2=0.00025973631311757873 (change=99.58728972727256 %)
[2025-06-06 13:07:27] 2025-06-06 13:07:14,688 | INFO     | sum of square deviations: 170944600.5
[2025-06-06 13:07:27] 2025-06-06 13:07:14,688 | INFO     | sum of deviations: 892124054.5000001
[2025-06-06 13:07:27] 2025-06-06 13:07:14,689 | INFO     | mean x: 1749212711.5
[2025-06-06 13:07:27] 2025-06-06 13:07:14,689 | INFO     | mean y: 2662245.8170731706
[2025-06-06 13:07:27] 2025-06-06 13:07:14,689 | INFO     | -- intersect: -9126112408.67293
[2025-06-06 13:07:27] 2025-06-06 13:07:14,689 | INFO     | intersect: -9126112408.67293
[2025-06-06 13:07:27] 2025-06-06 13:07:14,689 | INFO     | chi2: 0.00014145609350076828
[2025-06-06 13:07:27] 2025-06-06 13:07:14,689 | INFO     | current chi2=0.00014145609350076828 (change=45.53857648825051 %)
[2025-06-06 13:07:27] 2025-06-06 13:07:14,690 | INFO     | sum of square deviations: 141539398.0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,690 | INFO     | sum of deviations: 693216016.9999999
[2025-06-06 13:07:27] 2025-06-06 13:07:14,690 | INFO     | mean x: 1749212864.0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,690 | INFO     | mean y: 2663275.116883117
[2025-06-06 13:07:27] 2025-06-06 13:07:14,690 | INFO     | -- intersect: -8564438122.807972
[2025-06-06 13:07:27] 2025-06-06 13:07:14,691 | INFO     | intersect: -8564438122.807972
[2025-06-06 13:07:27] 2025-06-06 13:07:14,691 | INFO     | chi2: 0.0001283376997062612
[2025-06-06 13:07:27] 2025-06-06 13:07:14,691 | INFO     | current chi2=0.0001283376997062612 (change=9.273827284390421 %)
[2025-06-06 13:07:27] 2025-06-06 13:07:14,691 | INFO     | left removable region: 50
[2025-06-06 13:07:27] 2025-06-06 13:07:14,691 | INFO     | sum of square deviations: 30168007.5
[2025-06-06 13:07:27] 2025-06-06 13:07:14,692 | INFO     | sum of deviations: 113944218.0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,692 | INFO     | mean x: 1749213443.5
[2025-06-06 13:07:27] 2025-06-06 13:07:14,692 | INFO     | mean y: 2667155.9565217393
[2025-06-06 13:07:27] 2025-06-06 13:07:14,692 | INFO     | -- intersect: -6604091939.243739
[2025-06-06 13:07:27] 2025-06-06 13:07:14,692 | INFO     | intersect: -6604091939.243739
[2025-06-06 13:07:27] 2025-06-06 13:07:14,692 | INFO     | chi2: 3.713689961492774e-05
[2025-06-06 13:07:27] 2025-06-06 13:07:14,692 | INFO     | -- intersect: -6604091939.243739
[2025-06-06 13:07:27] 2025-06-06 13:07:14,693 | INFO     | current memory leak: 3.78 B/s (using 46 data points, chi2=0.00)
[2025-06-06 13:07:27] 2025-06-06 13:07:14,693 | INFO     | ..............................
[2025-06-06 13:07:27] 2025-06-06 13:07:14,693 | INFO     | . Timing measurements:
[2025-06-06 13:07:27] 2025-06-06 13:07:14,693 | INFO     | . get job = 0 s
[2025-06-06 13:07:27] 2025-06-06 13:07:14,693 | INFO     | . initial setup = 3 s
[2025-06-06 13:07:27] 2025-06-06 13:07:14,693 | INFO     | . payload setup = 9 s
[2025-06-06 13:07:27] 2025-06-06 13:07:14,694 | INFO     | . stage-in = 0 s
[2025-06-06 13:07:27] 2025-06-06 13:07:14,694 | INFO     | . payload execution = 6210 s
[2025-06-06 13:07:27] 2025-06-06 13:07:14,694 | INFO     | . stage-out = 0 s
[2025-06-06 13:07:27] 2025-06-06 13:07:14,694 | INFO     | . log creation = 0 s
[2025-06-06 13:07:27] 2025-06-06 13:07:14,694 | INFO     | ..............................
[2025-06-06 13:07:27] 2025-06-06 13:07:14,802 | INFO     | 
[2025-06-06 13:07:27] 2025-06-06 13:07:14,802 | INFO     | job summary report
[2025-06-06 13:07:27] 2025-06-06 13:07:14,803 | INFO     | --------------------------------------------------
[2025-06-06 13:07:27] 2025-06-06 13:07:14,803 | INFO     | PanDA job id: 6678363245
[2025-06-06 13:07:27] 2025-06-06 13:07:14,803 | INFO     | task id: 45006595
[2025-06-06 13:07:27] 2025-06-06 13:07:14,803 | INFO     | errors: (none)
[2025-06-06 13:07:27] 2025-06-06 13:07:14,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 13:07:27] 2025-06-06 13:07:14,803 | INFO     | pilot state: finished 
[2025-06-06 13:07:27] 2025-06-06 13:07:14,803 | INFO     | transexitcode: 0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,803 | INFO     | exeerrorcode: 0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,804 | INFO     | exeerrordiag: 
[2025-06-06 13:07:27] 2025-06-06 13:07:14,804 | INFO     | exitcode: 0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,804 | INFO     | exitmsg: OK
[2025-06-06 13:07:27] 2025-06-06 13:07:14,804 | INFO     | cpuconsumptiontime: 49346 s
[2025-06-06 13:07:27] 2025-06-06 13:07:14,804 | INFO     | nevents: 400
[2025-06-06 13:07:27] 2025-06-06 13:07:14,804 | INFO     | neventsw: 0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,804 | INFO     | pid: 2260846
[2025-06-06 13:07:27] 2025-06-06 13:07:14,804 | INFO     | pgrp: 2260846
[2025-06-06 13:07:27] 2025-06-06 13:07:14,804 | INFO     | corecount: 12
[2025-06-06 13:07:27] 2025-06-06 13:07:14,805 | INFO     | event service: False
[2025-06-06 13:07:27] 2025-06-06 13:07:14,805 | INFO     | sizes: {0: 2397192, 1: 2397391, 6: 2397597, 11: 2397625, 6224: 2424219, 6225: 2433206, 6226: 2433390, 6231: 2433560}
[2025-06-06 13:07:27] 2025-06-06 13:07:14,805 | INFO     | --------------------------------------------------
[2025-06-06 13:07:27] 2025-06-06 13:07:14,805 | INFO     | 
[2025-06-06 13:07:27] 2025-06-06 13:07:14,805 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/0
[2025-06-06 13:07:27] 2025-06-06 13:07:14,823 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,823 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,823 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,823 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,823 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,823 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,824 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,825 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 13:07:27] 2025-06-06 13:07:14,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,825 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 13:07:27] 2025-06-06 13:07:14,825 | INFO     | job 6678363245 has completed (purged errors)
[2025-06-06 13:07:27] 2025-06-06 13:07:14,826 | INFO     | overall cleanup function is called
[2025-06-06 13:07:27] 2025-06-06 13:07:15,834 | INFO     | --- collectZombieJob: --- 10, [2260846]
[2025-06-06 13:07:27] 2025-06-06 13:07:15,834 | INFO     | zombie collector waiting for pid 2260846
[2025-06-06 13:07:27] 2025-06-06 13:07:15,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 13:07:27] 2025-06-06 13:07:15,834 | INFO     | collected zombie processes
[2025-06-06 13:07:27] 2025-06-06 13:07:15,834 | INFO     | will attempt to kill all subprocesses of pid=2260846
[2025-06-06 13:07:27] 2025-06-06 13:07:16,011 | INFO     | process IDs to be killed: [2260846] (in reverse order)
[2025-06-06 13:07:27] 2025-06-06 13:07:16,064 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 13:07:27] 2025-06-06 13:07:16,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 13:07:27] 2025-06-06 13:07:16,069 | INFO     | did not find any defunct processes belonging to 2260846
[2025-06-06 13:07:27] 2025-06-06 13:07:16,072 | INFO     | did not find any defunct processes belonging to 2260846
[2025-06-06 13:07:27] 2025-06-06 13:07:16,073 | INFO     | ready for new job
[2025-06-06 13:07:27] 2025-06-06 13:07:16,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 13:07:27] 2025-06-06 13:07:16,074 | INFO     | **************************************
[2025-06-06 13:07:27] 2025-06-06 13:07:16,074 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 13:07:27] 2025-06-06 13:07:16,075 | INFO     | **************************************
[2025-06-06 13:07:27] 2025-06-06 13:07:16,075 | INFO     | 
[2025-06-06 13:07:27] 2025-06-06 13:07:16,077 | INFO     | architecture information:
[2025-06-06 13:07:27] 2025-06-06 13:07:16,077 | INFO     | executing command: cat /etc/os-release
[2025-06-06 13:07:27] 2025-06-06 13:07:16,091 | INFO     | cat /etc/os-release:
[2025-06-06 13:07:27] NAME="CentOS Linux"
[2025-06-06 13:07:27] VERSION="7 (Core)"
[2025-06-06 13:07:27] ID="centos"
[2025-06-06 13:07:27] ID_LIKE="rhel fedora"
[2025-06-06 13:07:27] VERSION_ID="7"
[2025-06-06 13:07:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 13:07:27] ANSI_COLOR="0;31"
[2025-06-06 13:07:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 13:07:27] HOME_URL="https://www.centos.org/"
[2025-06-06 13:07:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 13:07:27] 
[2025-06-06 13:07:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 13:07:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 13:07:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 13:07:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 13:07:27] 
[2025-06-06 13:07:27] 2025-06-06 13:07:16,091 | INFO     | **************************************
[2025-06-06 13:07:27] 2025-06-06 13:07:16,595 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/0
[2025-06-06 13:07:27] 2025-06-06 13:07:16,608 | INFO     | sufficient remaining disk space (98571386880 B)
[2025-06-06 13:07:27] 2025-06-06 13:07:16,608 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 13:07:27] 2025-06-06 13:07:16,608 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 13:07:27] 2025-06-06 13:07:16,609 | INFO     | update_server=False
[2025-06-06 13:07:27] 2025-06-06 13:07:16,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 13:07:27] 2025-06-06 13:07:16,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:07:27] 2025-06-06 13:07:16,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 13:07:27] 2025-06-06 13:07:16,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 13:07:27] 2025-06-06 13:07:16,610 | INFO     | aborting loop
[2025-06-06 13:07:27] 2025-06-06 13:07:16,647 | INFO     | all job control threads have been joined
[2025-06-06 13:07:27] 2025-06-06 13:07:16,922 | INFO     | all data control threads have been joined
[2025-06-06 13:07:27] 2025-06-06 13:07:17,048 | INFO     | all payload control threads have been joined
[2025-06-06 13:07:27] 2025-06-06 13:07:17,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 13:07:27] 2025-06-06 13:07:17,467 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 13:07:27] 2025-06-06 13:07:17,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 13:07:27] 2025-06-06 13:07:17,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 13:07:27] 2025-06-06 13:07:17,614 | INFO     | [job] retrieve thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:17,614 | INFO     | [job] queue monitor thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:17,615 | INFO     | [job] job monitor thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:17,652 | INFO     | [job] control thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:17,776 | INFO     | [payload] failed_post thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:17,834 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:17,927 | INFO     | [data] control thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:18,053 | INFO     | [payload] control thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:18,634 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:18,695 | INFO     | [data] copytool_in thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:18,721 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:18,799 | INFO     | [payload] validate_post thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:18,986 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:19,025 | INFO     | [job] validate thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:19,148 | INFO     | [data] copytool_out thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:20,615 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 13:07:27] 2025-06-06 13:07:22,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129410450421568)>', '<ExcThread(monitor, started 129409814083328)>']
[2025-06-06 13:07:27] 2025-06-06 13:07:22,492 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 13:07:27] 2025-06-06 13:07:22,492 | INFO     | [monitor] control thread has ended
[2025-06-06 13:07:27] 2025-06-06 13:07:27,369 | INFO     | all workflow threads have been joined
[2025-06-06 13:07:27] 2025-06-06 13:07:27,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 13:07:27] 2025-06-06 13:07:27,369 | INFO     | traces error code: 0
[2025-06-06 13:07:27] 2025-06-06 13:07:27,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 13:07:27] 2025-06-06 13:07:27,497 [wrapper] ==== pilot stdout END ====
[2025-06-06 13:07:27] 2025-06-06 13:07:27,500 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 13:07:27] 2025-06-06 13:07:27,502 [wrapper] pilotpid: 2254149
[2025-06-06 13:07:27] 2025-06-06 13:07:27,504 [wrapper] Pilot exit status: 0
[2025-06-06 13:07:27] 2025-06-06 13:07:27,515 [wrapper] pandaids: 6678363245
[2025-06-06 13:07:27] 2025-06-06 13:07:27,549 [wrapper] cleanup supervisor_pilot 2347395 2254150
[2025-06-06 13:07:27] 2025-06-06 13:07:27,551 [wrapper] Test setup, not cleaning
[2025-06-06 13:07:27] 2025-06-06 13:07:27,554 [wrapper] apfmon messages muted
[2025-06-06 13:07:27] 2025-06-06 13:07:27,557 [wrapper] ==== wrapper stdout END ====
[2025-06-06 13:07:27] 2025-06-06 13:07:27,559 [wrapper] ==== wrapper stderr END ====
[2025-06-06 13:07:27]  *** Error codes and diagnostics ***
[2025-06-06 13:07:27]     "exeErrorCode": 0,
[2025-06-06 13:07:27]     "exeErrorDiag": "",
[2025-06-06 13:07:27]     "pilotErrorCode": 0,
[2025-06-06 13:07:27]     "pilotErrorDiag": "",
[2025-06-06 13:07:27]  *** Listing of results directory ***
[2025-06-06 13:07:27] total 389180
[2025-06-06 13:07:27] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-06 13:07:27] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:19 queuedata.json
[2025-06-06 13:07:27] -rwx------ 1 boinc boinc     37140 Jun  4 05:20 runpilot2-wrapper.sh
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc       100 Jun  6 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 13:07:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 11:22 run_atlas
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc       105 Jun  6 11:22 job.xml
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc      6596 Jun  6 11:22 init_data.xml
[2025-06-06 13:07:27] -rw-r--r-- 2 boinc boinc 215345923 Jun  6 11:22 EVNT.45006593._002133.pool.root.1
[2025-06-06 13:07:27] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:22 start_atlas.sh
[2025-06-06 13:07:27] drwxrwx--x 2 boinc boinc      4096 Jun  6 11:22 shared
[2025-06-06 13:07:27] -rw-r--r-- 2 boinc boinc    508880 Jun  6 11:22 input.tar.gz
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc         0 Jun  6 11:22 boinc_lockfile
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc      2524 Jun  6 11:22 pandaJob.out
[2025-06-06 13:07:27] -rw------- 1 boinc boinc    985732 Jun  6 11:23 agis_schedconf.cvmfs.json
[2025-06-06 13:07:27] -rw------- 1 boinc boinc   1598969 Jun  6 11:23 agis_ddmendpoints.agis.ALL.json
[2025-06-06 13:07:27] drwx------ 4 boinc boinc      4096 Jun  6 11:23 pilot3
[2025-06-06 13:07:27] -rw------- 1 boinc boinc 177386604 Jun  6 13:06 HITS.45006595._053285.pool.root.1
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc       529 Jun  6 13:06 boinc_task_state.xml
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 13:07 boinc_mmap_file
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc        27 Jun  6 13:07 wrapper_checkpoint.txt
[2025-06-06 13:07:27] -rw------- 1 boinc boinc      1020 Jun  6 13:07 memory_monitor_summary.json
[2025-06-06 13:07:27] -rw------- 1 boinc boinc    362649 Jun  6 13:07 log.45006595._053285.job.log.tgz.1
[2025-06-06 13:07:27] -rw------- 1 boinc boinc        95 Jun  6 13:07 pilot_heartbeat.json
[2025-06-06 13:07:27] -rw------- 1 boinc boinc      7666 Jun  6 13:07 heartbeat.json
[2025-06-06 13:07:27] -rw------- 1 boinc boinc      4376 Jun  6 13:07 pilotlog.txt
[2025-06-06 13:07:27] -rw------- 1 boinc boinc    616243 Jun  6 13:07 log.45006595._053285.job.log.1
[2025-06-06 13:07:27] -rw------- 1 boinc boinc       357 Jun  6 13:07 output.list
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc       620 Jun  6 13:07 runtime_log
[2025-06-06 13:07:27] -rw------- 1 boinc boinc    993280 Jun  6 13:07 result.tar.gz
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc      8968 Jun  6 13:07 runtime_log.err
[2025-06-06 13:07:27] -rw------- 1 boinc boinc       653 Jun  6 13:07 d40NDmfjvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeMnKDm1Z0iLo.diag
[2025-06-06 13:07:27] -rw-rw-r-- 1 boinc boinc     20890 Jun  6 13:07 stderr.txt
[2025-06-06 13:07:27] HITS file was successfully produced:
[2025-06-06 13:07:27] -rw------- 1 boinc boinc 177386604 Jun  6 13:06 shared/HITS.pool.root.1
[2025-06-06 13:07:27]  *** Contents of shared directory: ***
[2025-06-06 13:07:27] total 385028
[2025-06-06 13:07:27] -rw-r--r-- 2 boinc boinc 215345923 Jun  6 11:22 ATLAS.root_0
[2025-06-06 13:07:27] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:22 start_atlas.sh
[2025-06-06 13:07:27] -rw-r--r-- 2 boinc boinc    508880 Jun  6 11:22 input.tar.gz
[2025-06-06 13:07:27] -rw------- 1 boinc boinc 177386604 Jun  6 13:06 HITS.pool.root.1
[2025-06-06 13:07:27] -rw------- 1 boinc boinc    993280 Jun  6 13:07 result.tar.gz
13:07:28 (2250394): run_atlas exited; CPU time 49420.448888
13:07:28 (2250394): called boinc_finish(0)

</stderr_txt>
]]>

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