Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:08:54 (894258): wrapper (7.7.26015): starting
12:08:54 (894258): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 12:08:54] Arguments: --nthreads 12
[2025-06-05 12:08:54] Threads: 12
[2025-06-05 12:08:54] Checking for CVMFS
[2025-06-05 12:08:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:08:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:08:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:08:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:08:55] 2.12.7.0 3695 889 53404 146818 2 187 3515400 4096001 2621 130560 0 2460412 99.997 236571 190 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 12:08:55] CVMFS is ok
[2025-06-05 12:08:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 12:08:55] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 12:08:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 12:08:55] Further information can be found at the LHC@home message board.
[2025-06-05 12:08:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:08:55] Checking for apptainer binary...
[2025-06-05 12:08:55] apptainer is not installed, using version from CVMFS
[2025-06-05 12:08:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:08:55] dualxeon2
[2025-06-05 12:08:55] apptainer works
[2025-06-05 12:08:55] Set ATHENA_PROC_NUMBER=12
[2025-06-05 12:08:55] Set ATHENA_CORE_NUMBER=12
[2025-06-05 12:08:55] Starting ATLAS job with PandaID=6678286280
[2025-06-05 12:08:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:55:09]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:55:09] 2025-06-05 13:54:48,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:55:09] 2025-06-05 13:54:48,257 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:55:09] 2025-06-05 13:54:48,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:55:09] 2025-06-05 13:54:48,264 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:55:09] 2025-06-05 13:54:48,265 | INFO     | sum of square deviations: 348769330.0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,265 | INFO     | sum of deviations: 8986169524.5
[2025-06-05 13:55:09] 2025-06-05 13:54:48,265 | INFO     | mean x: 1749128506.5
[2025-06-05 13:55:09] 2025-06-05 13:54:48,265 | INFO     | mean y: 2583231.144230769
[2025-06-05 13:55:09] 2025-06-05 13:54:48,266 | INFO     | -- intersect: -45064353358.56249
[2025-06-05 13:55:09] 2025-06-05 13:54:48,266 | INFO     | intersect: -45064353358.56249
[2025-06-05 13:55:09] 2025-06-05 13:54:48,266 | INFO     | chi2: 2.162711340897646
[2025-06-05 13:55:09] 2025-06-05 13:54:48,266 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,270 | INFO     | sum of deviations: 15120561049.999998
[2025-06-05 13:55:09] 2025-06-05 13:54:48,270 | INFO     | mean x: 1749128354.0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,270 | INFO     | mean y: 2601888.1515151514
[2025-06-05 13:55:09] 2025-06-05 13:54:48,270 | INFO     | -- intersect: -87909748566.3898
[2025-06-05 13:55:09] 2025-06-05 13:54:48,271 | INFO     | intersect: -87909748566.3898
[2025-06-05 13:55:09] 2025-06-05 13:54:48,271 | INFO     | chi2: 1.4602875431815454
[2025-06-05 13:55:09] 2025-06-05 13:54:48,271 | INFO     | current chi2=1.4602875431815454 (change=32.47885117320167 %)
[2025-06-05 13:55:09] 2025-06-05 13:54:48,271 | INFO     | sum of square deviations: 257521107.5
[2025-06-05 13:55:09] 2025-06-05 13:54:48,272 | INFO     | sum of deviations: 14262674435.0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,272 | INFO     | mean x: 1749128201.5
[2025-06-05 13:55:09] 2025-06-05 13:54:48,272 | INFO     | mean y: 2598870.1276595746
[2025-06-05 13:55:09] 2025-06-05 13:54:48,272 | INFO     | -- intersect: -96871969297.34413
[2025-06-05 13:55:09] 2025-06-05 13:54:48,272 | INFO     | intersect: -96871969297.34413
[2025-06-05 13:55:09] 2025-06-05 13:54:48,272 | INFO     | chi2: 1.4632288299498266
[2025-06-05 13:55:09] 2025-06-05 13:54:48,273 | INFO     | current chi2=1.4632288299498266 (change=-0.2014183290143658 %)
[2025-06-05 13:55:09] 2025-06-05 13:54:48,273 | INFO     | right removable region: 93
[2025-06-05 13:55:09] 2025-06-05 13:54:48,273 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,278 | INFO     | sum of deviations: -6879649601.0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,278 | INFO     | mean x: 1749128659.0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,278 | INFO     | mean y: 2632525.3131313133
[2025-06-05 13:55:09] 2025-06-05 13:54:48,278 | INFO     | -- intersect: 40001563133.060715
[2025-06-05 13:55:09] 2025-06-05 13:54:48,278 | INFO     | intersect: 40001563133.060715
[2025-06-05 13:55:09] 2025-06-05 13:54:48,278 | INFO     | chi2: 0.7395375914466379
[2025-06-05 13:55:09] 2025-06-05 13:54:48,279 | INFO     | current chi2=0.7395375914466379 (change=65.80507174204357 %)
[2025-06-05 13:55:09] 2025-06-05 13:54:48,279 | INFO     | sum of square deviations: 257521107.5
[2025-06-05 13:55:09] 2025-06-05 13:54:48,279 | INFO     | sum of deviations: -5904567529.0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,279 | INFO     | mean x: 1749128811.5
[2025-06-05 13:55:09] 2025-06-05 13:54:48,280 | INFO     | mean y: 2629071.2978723403
[2025-06-05 13:55:09] 2025-06-05 13:54:48,280 | INFO     | -- intersect: 40107493813.00166
[2025-06-05 13:55:09] 2025-06-05 13:54:48,280 | INFO     | intersect: 40107493813.00166
[2025-06-05 13:55:09] 2025-06-05 13:54:48,280 | INFO     | chi2: 0.7394477596209483
[2025-06-05 13:55:09] 2025-06-05 13:54:48,280 | INFO     | current chi2=0.7394477596209483 (change=0.012147026294340692 %)
[2025-06-05 13:55:09] 2025-06-05 13:54:48,280 | INFO     | left removable region: 20
[2025-06-05 13:55:09] 2025-06-05 13:54:48,284 | INFO     | sum of square deviations: 120605052.0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,284 | INFO     | sum of deviations: 39698494.99999999
[2025-06-05 13:55:09] 2025-06-05 13:54:48,284 | INFO     | mean x: 1749128781.0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,284 | INFO     | mean y: 2653066.657534247
[2025-06-05 13:55:09] 2025-06-05 13:54:48,284 | INFO     | -- intersect: -573092136.5109415
[2025-06-05 13:55:09] 2025-06-05 13:54:48,285 | INFO     | intersect: -573092136.5109415
[2025-06-05 13:55:09] 2025-06-05 13:54:48,285 | INFO     | chi2: 9.595609715234006e-05
[2025-06-05 13:55:09] 2025-06-05 13:54:48,285 | INFO     | -- intersect: -573092136.5109415
[2025-06-05 13:55:09] 2025-06-05 13:54:48,285 | INFO     | current memory leak: 0.33 B/s (using 73 data points, chi2=0.00)
[2025-06-05 13:55:09] 2025-06-05 13:54:48,286 | INFO     | ..............................
[2025-06-05 13:55:09] 2025-06-05 13:54:48,286 | INFO     | . Timing measurements:
[2025-06-05 13:55:09] 2025-06-05 13:54:48,286 | INFO     | . get job = 0 s
[2025-06-05 13:55:09] 2025-06-05 13:54:48,286 | INFO     | . initial setup = 1 s
[2025-06-05 13:55:09] 2025-06-05 13:54:48,286 | INFO     | . payload setup = 5 s
[2025-06-05 13:55:09] 2025-06-05 13:54:48,286 | INFO     | . stage-in = 0 s
[2025-06-05 13:55:09] 2025-06-05 13:54:48,286 | INFO     | . payload execution = 6295 s
[2025-06-05 13:55:09] 2025-06-05 13:54:48,286 | INFO     | . stage-out = 1 s
[2025-06-05 13:55:09] 2025-06-05 13:54:48,286 | INFO     | . log creation = 0 s
[2025-06-05 13:55:09] 2025-06-05 13:54:48,287 | INFO     | ..............................
[2025-06-05 13:55:09] 2025-06-05 13:54:48,432 | INFO     | 
[2025-06-05 13:55:09] 2025-06-05 13:54:48,433 | INFO     | job summary report
[2025-06-05 13:55:09] 2025-06-05 13:54:48,433 | INFO     | --------------------------------------------------
[2025-06-05 13:55:09] 2025-06-05 13:54:48,433 | INFO     | PanDA job id: 6678286280
[2025-06-05 13:55:09] 2025-06-05 13:54:48,433 | INFO     | task id: 45006595
[2025-06-05 13:55:09] 2025-06-05 13:54:48,433 | INFO     | errors: (none)
[2025-06-05 13:55:09] 2025-06-05 13:54:48,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:55:09] 2025-06-05 13:54:48,433 | INFO     | pilot state: finished 
[2025-06-05 13:55:09] 2025-06-05 13:54:48,434 | INFO     | transexitcode: 0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,434 | INFO     | exeerrorcode: 0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,434 | INFO     | exeerrordiag: 
[2025-06-05 13:55:09] 2025-06-05 13:54:48,434 | INFO     | exitcode: 0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,434 | INFO     | exitmsg: OK
[2025-06-05 13:55:09] 2025-06-05 13:54:48,434 | INFO     | cpuconsumptiontime: 48542 s
[2025-06-05 13:55:09] 2025-06-05 13:54:48,434 | INFO     | nevents: 400
[2025-06-05 13:55:09] 2025-06-05 13:54:48,434 | INFO     | neventsw: 0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,434 | INFO     | pid: 904721
[2025-06-05 13:55:09] 2025-06-05 13:54:48,435 | INFO     | pgrp: 904721
[2025-06-05 13:55:09] 2025-06-05 13:54:48,435 | INFO     | corecount: 12
[2025-06-05 13:55:09] 2025-06-05 13:54:48,435 | INFO     | event service: False
[2025-06-05 13:55:09] 2025-06-05 13:54:48,435 | INFO     | sizes: {0: 2397349, 3: 2397555, 11: 2397583, 6304: 2424305, 6306: 2433260, 6307: 2433316, 6331: 2433614}
[2025-06-05 13:55:09] 2025-06-05 13:54:48,435 | INFO     | --------------------------------------------------
[2025-06-05 13:55:09] 2025-06-05 13:54:48,435 | INFO     | 
[2025-06-05 13:55:09] 2025-06-05 13:54:48,435 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 13:55:09] 2025-06-05 13:54:48,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,465 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,465 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:55:09] 2025-06-05 13:54:48,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:55:09] 2025-06-05 13:54:48,468 | INFO     | job 6678286280 has completed (purged errors)
[2025-06-05 13:55:09] 2025-06-05 13:54:48,468 | INFO     | overall cleanup function is called
[2025-06-05 13:55:09] 2025-06-05 13:54:49,479 | INFO     | --- collectZombieJob: --- 10, [904721]
[2025-06-05 13:55:09] 2025-06-05 13:54:49,479 | INFO     | zombie collector waiting for pid 904721
[2025-06-05 13:55:09] 2025-06-05 13:54:49,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:55:09] 2025-06-05 13:54:49,479 | INFO     | collected zombie processes
[2025-06-05 13:55:09] 2025-06-05 13:54:49,479 | INFO     | will attempt to kill all subprocesses of pid=904721
[2025-06-05 13:55:09] 2025-06-05 13:54:49,704 | INFO     | process IDs to be killed: [904721] (in reverse order)
[2025-06-05 13:55:09] 2025-06-05 13:54:49,778 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:55:09] 2025-06-05 13:54:49,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:55:09] 2025-06-05 13:54:49,787 | INFO     | did not find any defunct processes belonging to 904721
[2025-06-05 13:55:09] 2025-06-05 13:54:49,798 | INFO     | did not find any defunct processes belonging to 904721
[2025-06-05 13:55:09] 2025-06-05 13:54:49,798 | INFO     | ready for new job
[2025-06-05 13:55:09] 2025-06-05 13:54:49,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:55:09] 2025-06-05 13:54:49,800 | INFO     | **************************************
[2025-06-05 13:55:09] 2025-06-05 13:54:49,800 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:55:09] 2025-06-05 13:54:49,800 | INFO     | **************************************
[2025-06-05 13:55:09] 2025-06-05 13:54:49,800 | INFO     | 
[2025-06-05 13:55:09] 2025-06-05 13:54:49,806 | INFO     | architecture information:
[2025-06-05 13:55:09] 2025-06-05 13:54:49,806 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:55:09] 2025-06-05 13:54:49,829 | INFO     | cat /etc/os-release:
[2025-06-05 13:55:09] NAME="CentOS Linux"
[2025-06-05 13:55:09] VERSION="7 (Core)"
[2025-06-05 13:55:09] ID="centos"
[2025-06-05 13:55:09] ID_LIKE="rhel fedora"
[2025-06-05 13:55:09] VERSION_ID="7"
[2025-06-05 13:55:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:55:09] ANSI_COLOR="0;31"
[2025-06-05 13:55:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:55:09] HOME_URL="https://www.centos.org/"
[2025-06-05 13:55:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:55:09] 
[2025-06-05 13:55:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:55:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:55:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:55:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:55:09] 
[2025-06-05 13:55:09] 2025-06-05 13:54:49,830 | INFO     | **************************************
[2025-06-05 13:55:09] 2025-06-05 13:54:50,332 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 13:55:09] 2025-06-05 13:54:50,354 | INFO     | sufficient remaining disk space (85585821696 B)
[2025-06-05 13:55:09] 2025-06-05 13:54:50,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:55:09] 2025-06-05 13:54:50,358 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:55:09] 2025-06-05 13:54:50,358 | INFO     | update_server=False
[2025-06-05 13:55:09] 2025-06-05 13:54:50,359 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:55:09] 2025-06-05 13:54:50,359 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:55:09] 2025-06-05 13:54:50,359 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 13:55:09] 2025-06-05 13:54:50,360 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:55:09] 2025-06-05 13:54:50,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:55:09] 2025-06-05 13:54:50,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:55:09] 2025-06-05 13:54:50,556 | INFO     | all payload control threads have been joined
[2025-06-05 13:55:09] 2025-06-05 13:54:50,690 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 13:55:09] 2025-06-05 13:54:50,690 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 13:55:09] 2025-06-05 13:54:50,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:55:09] 2025-06-05 13:54:50,690 | INFO     | will abort loop
[2025-06-05 13:55:09] 2025-06-05 13:54:50,757 | INFO     | all job control threads have been joined
[2025-06-05 13:55:09] 2025-06-05 13:54:50,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:55:09] 2025-06-05 13:54:51,245 | INFO     | all data control threads have been joined
[2025-06-05 13:55:09] 2025-06-05 13:54:51,364 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:51,364 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:51,365 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:51,506 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:51,561 | INFO     | [payload] control thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:51,695 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:51,762 | INFO     | [job] control thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:52,122 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:52,250 | INFO     | [data] control thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:52,567 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:52,579 | INFO     | [job] validate thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:52,668 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:52,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:55:09] 2025-06-05 13:54:52,788 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:52,940 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:54:56,704 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:55:01,030 | INFO     | job.realtimelogging is not enabled
[2025-06-05 13:55:09] 2025-06-05 13:55:02,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:55:09] 2025-06-05 13:55:04,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131706547377984)>', '<ExcThread(monitor, started 131705625106176)>']
[2025-06-05 13:55:09] 2025-06-05 13:55:04,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:55:09] 2025-06-05 13:55:04,430 | INFO     | [monitor] control thread has ended
[2025-06-05 13:55:09] 2025-06-05 13:55:09,149 | INFO     | all workflow threads have been joined
[2025-06-05 13:55:09] 2025-06-05 13:55:09,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:55:09] 2025-06-05 13:55:09,149 | INFO     | traces error code: 0
[2025-06-05 13:55:09] 2025-06-05 13:55:09,150 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:55:09] 2025-06-05 13:55:09,297 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:55:09] 2025-06-05 13:55:09,300 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:55:09] 2025-06-05 13:55:09,302 [wrapper] pilotpid: 898008
[2025-06-05 13:55:09] 2025-06-05 13:55:09,305 [wrapper] Pilot exit status: 0
[2025-06-05 13:55:09] 2025-06-05 13:55:09,320 [wrapper] pandaids: 6678286280
[2025-06-05 13:55:09] 2025-06-05 13:55:09,386 [wrapper] cleanup supervisor_pilot  957600 898009
[2025-06-05 13:55:09] 2025-06-05 13:55:09,389 [wrapper] Test setup, not cleaning
[2025-06-05 13:55:09] 2025-06-05 13:55:09,394 [wrapper] apfmon messages muted
[2025-06-05 13:55:09] 2025-06-05 13:55:09,401 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:55:09] 2025-06-05 13:55:09,407 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:55:09]  *** Error codes and diagnostics ***
[2025-06-05 13:55:09]     "exeErrorCode": 0,
[2025-06-05 13:55:09]     "exeErrorDiag": "",
[2025-06-05 13:55:09]     "pilotErrorCode": 0,
[2025-06-05 13:55:09]     "pilotErrorDiag": "",
[2025-06-05 13:55:09]  *** Listing of results directory ***
[2025-06-05 13:55:09] total 387436
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc    495897 Jun  4 02:52 pilot3.tar.gz
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc      5111 Jun  4 03:07 queuedata.json
[2025-06-05 13:55:09] -rwx------ 1 boinc boinc     37140 Jun  4 03:08 runpilot2-wrapper.sh
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc       100 Jun  5 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:55:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 12:08 run_atlas
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc       105 Jun  5 12:08 job.xml
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc      6555 Jun  5 12:08 init_data.xml
[2025-06-05 13:55:09] -rw-r--r-- 2 boinc boinc 214780696 Jun  5 12:08 EVNT.45006593._002052.pool.root.1
[2025-06-05 13:55:09] -rw-r--r-- 2 boinc boinc     15093 Jun  5 12:08 start_atlas.sh
[2025-06-05 13:55:09] drwxrwx--x 2 boinc boinc      4096 Jun  5 12:08 shared
[2025-06-05 13:55:09] -rw-r--r-- 2 boinc boinc    508881 Jun  5 12:08 input.tar.gz
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc         0 Jun  5 12:08 boinc_lockfile
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc      2525 Jun  5 12:08 pandaJob.out
[2025-06-05 13:55:09] -rw------- 1 boinc boinc    982836 Jun  5 12:09 agis_schedconf.cvmfs.json
[2025-06-05 13:55:09] -rw------- 1 boinc boinc   1598969 Jun  5 12:09 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:55:09] drwx------ 4 boinc boinc      4096 Jun  5 12:09 pilot3
[2025-06-05 13:55:09] -rw------- 1 boinc boinc 176172752 Jun  5 13:53 HITS.45006595._051208.pool.root.1
[2025-06-05 13:55:09] -rw------- 1 boinc boinc        95 Jun  5 13:54 pilot_heartbeat.json
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc       529 Jun  5 13:54 boinc_task_state.xml
[2025-06-05 13:55:09] -rw------- 1 boinc boinc      1021 Jun  5 13:54 memory_monitor_summary.json
[2025-06-05 13:55:09] -rw------- 1 boinc boinc    367942 Jun  5 13:54 log.45006595._051208.job.log.tgz.1
[2025-06-05 13:55:09] -rw------- 1 boinc boinc      7665 Jun  5 13:54 heartbeat.json
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc      8192 Jun  5 13:55 boinc_mmap_file
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc        27 Jun  5 13:55 wrapper_checkpoint.txt
[2025-06-05 13:55:09] -rw------- 1 boinc boinc      4741 Jun  5 13:55 pilotlog.txt
[2025-06-05 13:55:09] -rw------- 1 boinc boinc    611016 Jun  5 13:55 log.45006595._051208.job.log.1
[2025-06-05 13:55:09] -rw------- 1 boinc boinc       357 Jun  5 13:55 output.list
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc       620 Jun  5 13:55 runtime_log
[2025-06-05 13:55:09] -rw------- 1 boinc boinc    993280 Jun  5 13:55 result.tar.gz
[2025-06-05 13:55:09] -rw------- 1 boinc boinc       647 Jun  5 13:55 RXjMDmMftg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyZaKDmw5NCfn.diag
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc      8726 Jun  5 13:55 runtime_log.err
[2025-06-05 13:55:09] -rw-r--r-- 1 boinc boinc     20873 Jun  5 13:55 stderr.txt
[2025-06-05 13:55:09] HITS file was successfully produced:
[2025-06-05 13:55:09] -rw------- 1 boinc boinc 176172752 Jun  5 13:53 shared/HITS.pool.root.1
[2025-06-05 13:55:09]  *** Contents of shared directory: ***
[2025-06-05 13:55:09] total 383288
[2025-06-05 13:55:09] -rw-r--r-- 2 boinc boinc 214780696 Jun  5 12:08 ATLAS.root_0
[2025-06-05 13:55:09] -rw-r--r-- 2 boinc boinc     15093 Jun  5 12:08 start_atlas.sh
[2025-06-05 13:55:09] -rw-r--r-- 2 boinc boinc    508881 Jun  5 12:08 input.tar.gz
[2025-06-05 13:55:09] -rw------- 1 boinc boinc 176172752 Jun  5 13:53 HITS.pool.root.1
[2025-06-05 13:55:09] -rw------- 1 boinc boinc    993280 Jun  5 13:55 result.tar.gz
13:55:10 (894258): run_atlas exited; CPU time 48630.449755
13:55:10 (894258): called boinc_finish(0)

</stderr_txt>
]]>

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