Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:01:29 (10991): wrapper (7.7.26015): starting
21:01:29 (10991): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:01:29] Arguments: --nthreads 8
[2025-06-04 21:01:29] Threads: 8
[2025-06-04 21:01:29] Checking for CVMFS
[2025-06-04 21:01:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:01:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:01:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:01:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:01:31] 2.11.2.0 28532 33697 88384 146791 1 201 24840091 25165825 3974 130560 0 18085578 99.768 20579746 2511 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 21:01:31] CVMFS is ok
[2025-06-04 21:01:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:01:31] Checking for apptainer binary...
[2025-06-04 21:01:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:01:31] Running /usr/bin/apptainer --version
[2025-06-04 21:01:31] apptainer version 1.3.2-1.el7
[2025-06-04 21:01:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:01:33] cg-vwn472.simple-grid.lan
[2025-06-04 21:01:33] apptainer works
[2025-06-04 21:01:34] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:01:34] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:01:34] Starting ATLAS job with PandaID=6678363402
[2025-06-04 21:01:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:39:04]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:39:04] 2025-06-04 22:38:45,862 | INFO     | mean y: 2466339.854368932
[2025-06-05 00:39:04] 2025-06-04 22:38:45,862 | INFO     | -- intersect: -23308667836.984383
[2025-06-05 00:39:04] 2025-06-04 22:38:45,862 | INFO     | intersect: -23308667836.984383
[2025-06-05 00:39:04] 2025-06-04 22:38:45,863 | INFO     | chi2: 1.4414117035888228
[2025-06-05 00:39:04] 2025-06-04 22:38:45,863 | INFO     | current chi2=1.4414117035888228 (change=-0.04559251156225223 %)
[2025-06-05 00:39:04] 2025-06-04 22:38:45,863 | INFO     | right removable region: 205
[2025-06-05 00:39:04] 2025-06-04 22:38:45,863 | INFO     | sum of square deviations: 2710627567.5
[2025-06-05 00:39:04] 2025-06-04 22:38:45,865 | INFO     | sum of deviations: 6502943247.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,865 | INFO     | mean x: 1749070327.5
[2025-06-05 00:39:04] 2025-06-04 22:38:45,865 | INFO     | mean y: 2490127.9223300973
[2025-06-05 00:39:04] 2025-06-04 22:38:45,865 | INFO     | -- intersect: -4193624901.349098
[2025-06-05 00:39:04] 2025-06-04 22:38:45,865 | INFO     | intersect: -4193624901.349098
[2025-06-05 00:39:04] 2025-06-04 22:38:45,866 | INFO     | chi2: 0.029053518332866287
[2025-06-05 00:39:04] 2025-06-04 22:38:45,866 | INFO     | current chi2=0.029053518332866287 (change=97.9834516058666 %)
[2025-06-05 00:39:04] 2025-06-04 22:38:45,866 | INFO     | sum of square deviations: 2518000700.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,868 | INFO     | sum of deviations: 6084908478.000001
[2025-06-05 00:39:04] 2025-06-04 22:38:45,868 | INFO     | mean x: 1749070480.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,868 | INFO     | mean y: 2490432.890547264
[2025-06-05 00:39:04] 2025-06-04 22:38:45,869 | INFO     | -- intersect: -4224249373.961584
[2025-06-05 00:39:04] 2025-06-04 22:38:45,869 | INFO     | intersect: -4224249373.961584
[2025-06-05 00:39:04] 2025-06-04 22:38:45,869 | INFO     | chi2: 0.020135948552670264
[2025-06-05 00:39:04] 2025-06-04 22:38:45,869 | INFO     | current chi2=0.020135948552670264 (change=30.69359682372161 %)
[2025-06-05 00:39:04] 2025-06-04 22:38:45,870 | INFO     | sum of square deviations: 2334722845.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,871 | INFO     | sum of deviations: 7704286885.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,871 | INFO     | mean x: 1749070632.5
[2025-06-05 00:39:04] 2025-06-04 22:38:45,871 | INFO     | mean y: 2489126.1530612246
[2025-06-05 00:39:04] 2025-06-04 22:38:45,871 | INFO     | -- intersect: -5769220335.536129
[2025-06-05 00:39:04] 2025-06-04 22:38:45,871 | INFO     | intersect: -5769220335.536129
[2025-06-05 00:39:04] 2025-06-04 22:38:45,872 | INFO     | chi2: 0.0011806067526949394
[2025-06-05 00:39:04] 2025-06-04 22:38:45,872 | INFO     | current chi2=0.0011806067526949394 (change=94.136820773023 %)
[2025-06-05 00:39:04] 2025-06-04 22:38:45,872 | INFO     | sum of square deviations: 2160561440.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,874 | INFO     | sum of deviations: 6466793976.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,874 | INFO     | mean x: 1749070785.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,874 | INFO     | mean y: 2490208.926701571
[2025-06-05 00:39:04] 2025-06-04 22:38:45,874 | INFO     | -- intersect: -5232667748.921325
[2025-06-05 00:39:04] 2025-06-04 22:38:45,874 | INFO     | intersect: -5232667748.921325
[2025-06-05 00:39:04] 2025-06-04 22:38:45,874 | INFO     | chi2: 0.0007300030427368963
[2025-06-05 00:39:04] 2025-06-04 22:38:45,874 | INFO     | current chi2=0.0007300030427368963 (change=38.16712965002632 %)
[2025-06-05 00:39:04] 2025-06-04 22:38:45,875 | INFO     | sum of square deviations: 1995283922.5
[2025-06-05 00:39:04] 2025-06-04 22:38:45,876 | INFO     | sum of deviations: 5600873783.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,876 | INFO     | mean x: 1749070937.5
[2025-06-05 00:39:04] 2025-06-04 22:38:45,876 | INFO     | mean y: 2491007.806451613
[2025-06-05 00:39:04] 2025-06-04 22:38:45,876 | INFO     | -- intersect: -4907249128.913856
[2025-06-05 00:39:04] 2025-06-04 22:38:45,876 | INFO     | intersect: -4907249128.913856
[2025-06-05 00:39:04] 2025-06-04 22:38:45,877 | INFO     | chi2: 0.0005823674379004228
[2025-06-05 00:39:04] 2025-06-04 22:38:45,877 | INFO     | current chi2=0.0005823674379004228 (change=20.22397116085494 %)
[2025-06-05 00:39:04] 2025-06-04 22:38:45,877 | INFO     | left removable region: 50
[2025-06-05 00:39:04] 2025-06-04 22:38:45,877 | INFO     | sum of square deviations: 1154663510.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,898 | INFO     | sum of deviations: 2687563437.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,899 | INFO     | mean x: 1749071517.0
[2025-06-05 00:39:04] 2025-06-04 22:38:45,899 | INFO     | mean y: 2493486.4838709678
[2025-06-05 00:39:04] 2025-06-04 22:38:45,899 | INFO     | -- intersect: -4068597889.554611
[2025-06-05 00:39:04] 2025-06-04 22:38:45,899 | INFO     | intersect: -4068597889.554611
[2025-06-05 00:39:04] 2025-06-04 22:38:45,900 | INFO     | chi2: 0.00021580410734471493
[2025-06-05 00:39:04] 2025-06-04 22:38:45,900 | INFO     | -- intersect: -4068597889.554611
[2025-06-05 00:39:04] 2025-06-04 22:38:45,900 | INFO     | current memory leak: 2.33 B/s (using 155 data points, chi2=0.00)
[2025-06-05 00:39:04] 2025-06-04 22:38:45,901 | INFO     | ..............................
[2025-06-05 00:39:04] 2025-06-04 22:38:45,901 | INFO     | . Timing measurements:
[2025-06-05 00:39:04] 2025-06-04 22:38:45,901 | INFO     | . get job = 0 s
[2025-06-05 00:39:04] 2025-06-04 22:38:45,901 | INFO     | . initial setup = 2 s
[2025-06-05 00:39:04] 2025-06-04 22:38:45,901 | INFO     | . payload setup = 13 s
[2025-06-05 00:39:04] 2025-06-04 22:38:45,901 | INFO     | . stage-in = 0 s
[2025-06-05 00:39:04] 2025-06-04 22:38:45,901 | INFO     | . payload execution = 12887 s
[2025-06-05 00:39:04] 2025-06-04 22:38:45,902 | INFO     | . stage-out = 1 s
[2025-06-05 00:39:04] 2025-06-04 22:38:45,902 | INFO     | . log creation = 0 s
[2025-06-05 00:39:04] 2025-06-04 22:38:45,902 | INFO     | ..............................
[2025-06-05 00:39:04] 2025-06-04 22:38:46,029 | INFO     | 
[2025-06-05 00:39:04] 2025-06-04 22:38:46,030 | INFO     | job summary report
[2025-06-05 00:39:04] 2025-06-04 22:38:46,030 | INFO     | --------------------------------------------------
[2025-06-05 00:39:04] 2025-06-04 22:38:46,030 | INFO     | PanDA job id: 6678363402
[2025-06-05 00:39:04] 2025-06-04 22:38:46,030 | INFO     | task id: 45006595
[2025-06-05 00:39:04] 2025-06-04 22:38:46,030 | INFO     | errors: (none)
[2025-06-05 00:39:04] 2025-06-04 22:38:46,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | pilot state: finished 
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | transexitcode: 0
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | exeerrorcode: 0
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | exeerrordiag: 
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | exitcode: 0
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | exitmsg: OK
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | cpuconsumptiontime: 47464 s
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | nevents: 400
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | neventsw: 0
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | pid: 24947
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | pgrp: 24947
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | corecount: 8
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | event service: False
[2025-06-05 00:39:04] 2025-06-04 22:38:46,031 | INFO     | sizes: {0: 2396515, 1: 2397371, 2: 2397371, 9: 2397605, 12: 2397633, 12905: 2426992, 12908: 2435933, 12909: 2435989, 12988: 2436159}
[2025-06-05 00:39:04] 2025-06-04 22:38:46,032 | INFO     | --------------------------------------------------
[2025-06-05 00:39:04] 2025-06-04 22:38:46,032 | INFO     | 
[2025-06-05 00:39:04] 2025-06-04 22:38:46,032 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 00:39:04] 2025-06-04 22:38:46,313 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,315 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:39:04] 2025-06-04 22:38:46,315 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,315 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:39:04] 2025-06-04 22:38:46,315 | INFO     | job 6678363402 has completed (purged errors)
[2025-06-05 00:39:04] 2025-06-04 22:38:46,315 | INFO     | overall cleanup function is called
[2025-06-05 00:39:04] 2025-06-04 22:38:47,325 | INFO     | --- collectZombieJob: --- 10, [24947]
[2025-06-05 00:39:04] 2025-06-04 22:38:47,325 | INFO     | zombie collector waiting for pid 24947
[2025-06-05 00:39:04] 2025-06-04 22:38:47,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:39:04] 2025-06-04 22:38:47,326 | INFO     | collected zombie processes
[2025-06-05 00:39:04] 2025-06-04 22:38:47,326 | INFO     | will attempt to kill all subprocesses of pid=24947
[2025-06-05 00:39:04] 2025-06-04 22:38:47,437 | INFO     | process IDs to be killed: [24947] (in reverse order)
[2025-06-05 00:39:04] 2025-06-04 22:38:48,323 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:39:04] 2025-06-04 22:38:48,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:39:04] 2025-06-04 22:38:48,326 | INFO     | did not find any defunct processes belonging to 24947
[2025-06-05 00:39:04] 2025-06-04 22:38:48,329 | INFO     | did not find any defunct processes belonging to 24947
[2025-06-05 00:39:04] 2025-06-04 22:38:48,330 | INFO     | ready for new job
[2025-06-05 00:39:04] 2025-06-04 22:38:48,330 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:39:04] 2025-06-04 22:38:48,331 | INFO     | **************************************
[2025-06-05 00:39:04] 2025-06-04 22:38:48,332 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:39:04] 2025-06-04 22:38:48,332 | INFO     | **************************************
[2025-06-05 00:39:04] 2025-06-04 22:38:48,332 | INFO     | 
[2025-06-05 00:39:04] 2025-06-04 22:38:48,332 | INFO     | pilot is running in a VM
[2025-06-05 00:39:04] 2025-06-04 22:38:48,333 | INFO     | architecture information:
[2025-06-05 00:39:04] 2025-06-04 22:38:48,351 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:39:04] 2025-06-04 22:38:48,634 | INFO     | cat /etc/os-release:
[2025-06-05 00:39:04] NAME="CentOS Linux"
[2025-06-05 00:39:04] VERSION="7 (Core)"
[2025-06-05 00:39:04] ID="centos"
[2025-06-05 00:39:04] ID_LIKE="rhel fedora"
[2025-06-05 00:39:04] VERSION_ID="7"
[2025-06-05 00:39:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:39:04] ANSI_COLOR="0;31"
[2025-06-05 00:39:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:39:04] HOME_URL="https://www.centos.org/"
[2025-06-05 00:39:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:39:04] 
[2025-06-05 00:39:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:39:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:39:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:39:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:39:04] 
[2025-06-05 00:39:04] 2025-06-04 22:38:48,634 | INFO     | **************************************
[2025-06-05 00:39:04] 2025-06-04 22:38:49,137 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 00:39:04] 2025-06-04 22:38:49,393 | INFO     | sufficient remaining disk space (497182310400 B)
[2025-06-05 00:39:04] 2025-06-04 22:38:49,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:39:04] 2025-06-04 22:38:49,394 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:39:04] 2025-06-04 22:38:49,394 | INFO     | update_server=False
[2025-06-05 00:39:04] 2025-06-04 22:38:49,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:39:04] 2025-06-04 22:38:49,394 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 00:39:04] 2025-06-04 22:38:49,395 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:39:04] 2025-06-04 22:38:49,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:39:04] 2025-06-04 22:38:49,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:39:04] 2025-06-04 22:38:49,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:39:04] 2025-06-04 22:38:49,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:39:04] 2025-06-04 22:38:49,405 | INFO     | aborting loop
[2025-06-05 00:39:04] 2025-06-04 22:38:49,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:39:04] 2025-06-04 22:38:49,617 | INFO     | all job control threads have been joined
[2025-06-05 00:39:04] 2025-06-04 22:38:50,294 | INFO     | all data control threads have been joined
[2025-06-05 00:39:04] 2025-06-04 22:38:50,402 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:50,410 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:50,477 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:50,606 | INFO     | [job] validate thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:50,622 | INFO     | [job] control thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:50,669 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:50,788 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:50,862 | INFO     | all payload control threads have been joined
[2025-06-05 00:39:04] 2025-06-04 22:38:51,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:39:04] 2025-06-04 22:38:51,212 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:51,300 | INFO     | [data] control thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:51,351 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:51,405 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:51,497 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:51,692 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:51,868 | INFO     | [payload] control thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:52,054 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:53,420 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:39:04] 2025-06-04 22:38:55,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980077901632)>', '<ExcThread(monitor, started 139979393054464)>']
[2025-06-05 00:39:04] 2025-06-04 22:38:55,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:39:04] 2025-06-04 22:38:55,436 | INFO     | [monitor] control thread has ended
[2025-06-05 00:39:04] 2025-06-04 22:39:00,339 | INFO     | all workflow threads have been joined
[2025-06-05 00:39:04] 2025-06-04 22:39:00,340 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:39:04] 2025-06-04 22:39:00,340 | INFO     | traces error code: 0
[2025-06-05 00:39:04] 2025-06-04 22:39:00,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:39:04] 2025-06-04 22:39:00,562 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:39:04] 2025-06-04 22:39:00,599 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:39:04] 2025-06-04 22:39:00,613 [wrapper] pilotpid: 16399
[2025-06-05 00:39:04] 2025-06-04 22:39:00,625 [wrapper] Pilot exit status: 0
[2025-06-05 00:39:04] 2025-06-04 22:39:00,814 [wrapper] pandaids: 6678363402
[2025-06-05 00:39:04] 2025-06-04 22:39:01,699 [wrapper] cleanup supervisor_pilot 29144 16400
[2025-06-05 00:39:04] 2025-06-04 22:39:01,794 [wrapper] Test setup, not cleaning
[2025-06-05 00:39:04] 2025-06-04 22:39:01,910 [wrapper] apfmon messages muted
[2025-06-05 00:39:04] 2025-06-04 22:39:01,913 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:39:04] 2025-06-04 22:39:01,917 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:39:04]  *** Error codes and diagnostics ***
[2025-06-05 00:39:04]     "exeErrorCode": 0,
[2025-06-05 00:39:04]     "exeErrorDiag": "",
[2025-06-05 00:39:04]     "pilotErrorCode": 0,
[2025-06-05 00:39:04]     "pilotErrorDiag": "",
[2025-06-05 00:39:04]  *** Listing of results directory ***
[2025-06-05 00:39:04] total 396012
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:58 pilot3.tar.gz
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc      5111 Jun  4 07:22 queuedata.json
[2025-06-05 00:39:04] -rwx------. 1 boinc boinc     37140 Jun  4 07:24 runpilot2-wrapper.sh
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc       100 Jun  4 21:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:39:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 21:01 run_atlas
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc       105 Jun  4 21:01 job.xml
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc      6392 Jun  4 21:01 init_data.xml
[2025-06-05 00:39:04] -rw-r--r--. 2 boinc boinc 215787374 Jun  4 21:01 EVNT.45006593._002139.pool.root.1
[2025-06-05 00:39:04] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:01 start_atlas.sh
[2025-06-05 00:39:04] drwxrwx--x. 2 boinc boinc        68 Jun  4 21:01 shared
[2025-06-05 00:39:04] -rw-r--r--. 2 boinc boinc    508885 Jun  4 21:01 input.tar.gz
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc         0 Jun  4 21:01 boinc_lockfile
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc      2526 Jun  4 21:01 pandaJob.out
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc    990984 Jun  4 21:01 agis_schedconf.cvmfs.json
[2025-06-05 00:39:04] drwx------. 4 boinc boinc      4096 Jun  4 21:01 pilot3
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc 182878492 Jun  5 00:36 HITS.45006595._053442.pool.root.1
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc       531 Jun  5 00:36 boinc_task_state.xml
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc      1030 Jun  5 00:37 memory_monitor_summary.json
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc   1598969 Jun  5 00:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc    371733 Jun  5 00:37 log.45006595._053442.job.log.tgz.1
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc        95 Jun  5 00:38 pilot_heartbeat.json
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc      7687 Jun  5 00:38 heartbeat.json
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc      4539 Jun  5 00:39 pilotlog.txt
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc   1140726 Jun  5 00:39 log.45006595._053442.job.log.1
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc      8192 Jun  5 00:39 boinc_mmap_file
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc       357 Jun  5 00:39 output.list
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc       620 Jun  5 00:39 runtime_log
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc   1536000 Jun  5 00:39 result.tar.gz
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc        28 Jun  5 00:39 wrapper_checkpoint.txt
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc      8659 Jun  5 00:39 runtime_log.err
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc       656 Jun  5 00:39 NacMDmmmvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLmaKDm4BOlhn.diag
[2025-06-05 00:39:04] -rw-r--r--. 1 boinc boinc     20492 Jun  5 00:39 stderr.txt
[2025-06-05 00:39:04] HITS file was successfully produced:
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc 182878492 Jun  5 00:36 shared/HITS.pool.root.1
[2025-06-05 00:39:04]  *** Contents of shared directory: ***
[2025-06-05 00:39:04] total 391344
[2025-06-05 00:39:04] -rw-r--r--. 2 boinc boinc 215787374 Jun  4 21:01 ATLAS.root_0
[2025-06-05 00:39:04] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:01 start_atlas.sh
[2025-06-05 00:39:04] -rw-r--r--. 2 boinc boinc    508885 Jun  4 21:01 input.tar.gz
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc 182878492 Jun  5 00:36 HITS.pool.root.1
[2025-06-05 00:39:04] -rw-------. 1 boinc boinc   1536000 Jun  5 00:39 result.tar.gz
00:39:05 (10991): run_atlas exited; CPU time 47617.188695
00:39:05 (10991): called boinc_finish(0)

</stderr_txt>
]]>

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