Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:29:51 (27859): wrapper (7.7.26015): starting
06:29:51 (27859): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:29:51] Arguments: --nthreads 8
[2025-06-04 06:29:51] Threads: 8
[2025-06-04 06:29:51] Checking for CVMFS
[2025-06-04 06:29:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:29:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:29:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:29:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:29:52] 2.11.2.0 2936 8415 72080 146777 0 58 12745887 20275200 1 130560 0 2688314 99.984 1417306 46960 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:29:52] CVMFS is ok
[2025-06-04 06:29:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:29:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:29:52] Further information can be found at the LHC@home message board.
[2025-06-04 06:29:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:29:52] Checking for apptainer binary...
[2025-06-04 06:29:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:29:52] Running /usr/bin/apptainer --version
[2025-06-04 06:29:52] apptainer version 1.3.2-1.el7
[2025-06-04 06:29:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:29:54] c-204-13.aglt2.org
[2025-06-04 06:29:54] apptainer works
[2025-06-04 06:29:54] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:29:54] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:29:54] Starting ATLAS job with PandaID=6678362629
[2025-06-04 06:29:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:28:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:28:07] 2025-06-04 12:27:53,737 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 08:28:07] 2025-06-04 12:27:53,737 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678362629/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:28:07] 2025-06-04 12:27:53,738 | INFO     | extracted standard info from prmon json
[2025-06-04 08:28:07] 2025-06-04 12:27:53,738 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:28:07] 2025-06-04 12:27:53,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:28:07] 2025-06-04 12:27:53,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:28:07] 2025-06-04 12:27:53,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:28:07] 2025-06-04 12:27:53,742 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:28:07] 2025-06-04 12:27:53,742 | INFO     | sum of square deviations: 483971865.0
[2025-06-04 08:28:07] 2025-06-04 12:27:53,743 | INFO     | sum of deviations: -5759873028.0
[2025-06-04 08:28:07] 2025-06-04 12:27:53,743 | INFO     | mean x: 1749036551.5
[2025-06-04 08:28:07] 2025-06-04 12:27:53,743 | INFO     | mean y: 2498551.1896551726
[2025-06-04 08:28:07] 2025-06-04 12:27:53,744 | INFO     | -- intersect: 20818230180.48795
[2025-06-04 08:28:07] 2025-06-04 12:27:53,744 | INFO     | intersect: 20818230180.48795
[2025-06-04 08:28:07] 2025-06-04 12:27:53,744 | INFO     | chi2: 2.406060559125617
[2025-06-04 08:28:07] 2025-06-04 12:27:53,744 | INFO     | sum of square deviations: 424045160.0
[2025-06-04 08:28:07] 2025-06-04 12:27:53,745 | INFO     | sum of deviations: 2224693118.9999995
[2025-06-04 08:28:07] 2025-06-04 12:27:53,745 | INFO     | mean x: 1749036399.0
[2025-06-04 08:28:07] 2025-06-04 12:27:53,745 | INFO     | mean y: 2518195.4504504506
[2025-06-04 08:28:07] 2025-06-04 12:27:53,745 | INFO     | -- intersect: -9173554564.667452
[2025-06-04 08:28:07] 2025-06-04 12:27:53,745 | INFO     | intersect: -9173554564.667452
[2025-06-04 08:28:07] 2025-06-04 12:27:53,745 | INFO     | chi2: 1.649365742116605
[2025-06-04 08:28:07] 2025-06-04 12:27:53,746 | INFO     | current chi2=1.649365742116605 (change=31.449533310333695 %)
[2025-06-04 08:28:07] 2025-06-04 12:27:53,746 | INFO     | sum of square deviations: 369281342.5
[2025-06-04 08:28:07] 2025-06-04 12:27:53,746 | INFO     | sum of deviations: 2493732337.999999
[2025-06-04 08:28:07] 2025-06-04 12:27:53,747 | INFO     | mean x: 1749036246.5
[2025-06-04 08:28:07] 2025-06-04 12:27:53,747 | INFO     | mean y: 2518948.566037736
[2025-06-04 08:28:07] 2025-06-04 12:27:53,747 | INFO     | -- intersect: -11808606462.491488
[2025-06-04 08:28:07] 2025-06-04 12:27:53,747 | INFO     | intersect: -11808606462.491488
[2025-06-04 08:28:07] 2025-06-04 12:27:53,747 | INFO     | chi2: 1.6520651896292657
[2025-06-04 08:28:07] 2025-06-04 12:27:53,747 | INFO     | current chi2=1.6520651896292657 (change=-0.16366579247587348 %)
[2025-06-04 08:28:07] 2025-06-04 12:27:53,747 | INFO     | right removable region: 105
[2025-06-04 08:28:07] 2025-06-04 12:27:53,748 | INFO     | sum of square deviations: 424045160.0
[2025-06-04 08:28:07] 2025-06-04 12:27:53,748 | INFO     | sum of deviations: -22885975059.0
[2025-06-04 08:28:07] 2025-06-04 12:27:53,748 | INFO     | mean x: 1749036704.0
[2025-06-04 08:28:07] 2025-06-04 12:27:53,748 | INFO     | mean y: 2541239.6756756757
[2025-06-04 08:28:07] 2025-06-04 12:27:53,749 | INFO     | -- intersect: 94399115380.55153
[2025-06-04 08:28:07] 2025-06-04 12:27:53,749 | INFO     | intersect: 94399115380.55153
[2025-06-04 08:28:07] 2025-06-04 12:27:53,749 | INFO     | chi2: 0.931052972797278
[2025-06-04 08:28:07] 2025-06-04 12:27:53,749 | INFO     | current chi2=0.931052972797278 (change=61.30384294501587 %)
[2025-06-04 08:28:07] 2025-06-04 12:27:53,749 | INFO     | sum of square deviations: 369281342.5
[2025-06-04 08:28:07] 2025-06-04 12:27:53,750 | INFO     | sum of deviations: -23030634911.999996
[2025-06-04 08:28:07] 2025-06-04 12:27:53,750 | INFO     | mean x: 1749036856.5
[2025-06-04 08:28:07] 2025-06-04 12:27:53,750 | INFO     | mean y: 2541498.396226415
[2025-06-04 08:28:07] 2025-06-04 12:27:53,750 | INFO     | -- intersect: 109083138468.12704
[2025-06-04 08:28:07] 2025-06-04 12:27:53,750 | INFO     | intersect: 109083138468.12704
[2025-06-04 08:28:07] 2025-06-04 12:27:53,751 | INFO     | chi2: 0.9026308771336784
[2025-06-04 08:28:07] 2025-06-04 12:27:53,751 | INFO     | current chi2=0.9026308771336784 (change=3.052682983032374 %)
[2025-06-04 08:28:07] 2025-06-04 12:27:53,751 | INFO     | left removable region: 20
[2025-06-04 08:28:07] 2025-06-04 12:27:53,751 | INFO     | sum of square deviations: 190403570.0
[2025-06-04 08:28:07] 2025-06-04 12:27:53,751 | INFO     | sum of deviations: -8379383279.000002
[2025-06-04 08:28:07] 2025-06-04 12:27:53,752 | INFO     | mean x: 1749036826.0
[2025-06-04 08:28:07] 2025-06-04 12:27:53,752 | INFO     | mean y: 2546814.3647058825
[2025-06-04 08:28:07] 2025-06-04 12:27:53,752 | INFO     | -- intersect: 76975105333.82753
[2025-06-04 08:28:07] 2025-06-04 12:27:53,752 | INFO     | intersect: 76975105333.82753
[2025-06-04 08:28:07] 2025-06-04 12:27:53,752 | INFO     | chi2: 0.08652962051930232
[2025-06-04 08:28:07] 2025-06-04 12:27:53,752 | INFO     | -- intersect: 76975105333.82753
[2025-06-04 08:28:07] 2025-06-04 12:27:53,752 | INFO     | current memory leak: -44.01 B/s (using 85 data points, chi2=0.09)
[2025-06-04 08:28:07] 2025-06-04 12:27:53,753 | INFO     | ..............................
[2025-06-04 08:28:07] 2025-06-04 12:27:53,753 | INFO     | . Timing measurements:
[2025-06-04 08:28:07] 2025-06-04 12:27:53,753 | INFO     | . get job = 0 s
[2025-06-04 08:28:07] 2025-06-04 12:27:53,753 | INFO     | . initial setup = 2 s
[2025-06-04 08:28:07] 2025-06-04 12:27:53,753 | INFO     | . payload setup = 11 s
[2025-06-04 08:28:07] 2025-06-04 12:27:53,753 | INFO     | . stage-in = 0 s
[2025-06-04 08:28:07] 2025-06-04 12:27:53,754 | INFO     | . payload execution = 7021 s
[2025-06-04 08:28:07] 2025-06-04 12:27:53,754 | INFO     | . stage-out = 0 s
[2025-06-04 08:28:07] 2025-06-04 12:27:53,754 | INFO     | . log creation = 0 s
[2025-06-04 08:28:07] 2025-06-04 12:27:53,754 | INFO     | ..............................
[2025-06-04 08:28:07] 2025-06-04 12:27:54,170 | INFO     | 
[2025-06-04 08:28:07] 2025-06-04 12:27:54,170 | INFO     | job summary report
[2025-06-04 08:28:07] 2025-06-04 12:27:54,171 | INFO     | --------------------------------------------------
[2025-06-04 08:28:07] 2025-06-04 12:27:54,171 | INFO     | PanDA job id: 6678362629
[2025-06-04 08:28:07] 2025-06-04 12:27:54,171 | INFO     | task id: 45006595
[2025-06-04 08:28:07] 2025-06-04 12:27:54,171 | INFO     | errors: (none)
[2025-06-04 08:28:07] 2025-06-04 12:27:54,171 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:28:07] 2025-06-04 12:27:54,171 | INFO     | pilot state: finished 
[2025-06-04 08:28:07] 2025-06-04 12:27:54,171 | INFO     | transexitcode: 0
[2025-06-04 08:28:07] 2025-06-04 12:27:54,171 | INFO     | exeerrorcode: 0
[2025-06-04 08:28:07] 2025-06-04 12:27:54,171 | INFO     | exeerrordiag: 
[2025-06-04 08:28:07] 2025-06-04 12:27:54,172 | INFO     | exitcode: 0
[2025-06-04 08:28:07] 2025-06-04 12:27:54,172 | INFO     | exitmsg: OK
[2025-06-04 08:28:07] 2025-06-04 12:27:54,172 | INFO     | cpuconsumptiontime: 51435 s
[2025-06-04 08:28:07] 2025-06-04 12:27:54,172 | INFO     | nevents: 400
[2025-06-04 08:28:07] 2025-06-04 12:27:54,172 | INFO     | neventsw: 0
[2025-06-04 08:28:07] 2025-06-04 12:27:54,172 | INFO     | pid: 5802
[2025-06-04 08:28:07] 2025-06-04 12:27:54,172 | INFO     | pgrp: 5802
[2025-06-04 08:28:07] 2025-06-04 12:27:54,172 | INFO     | corecount: 8
[2025-06-04 08:28:07] 2025-06-04 12:27:54,172 | INFO     | event service: False
[2025-06-04 08:28:07] 2025-06-04 12:27:54,173 | INFO     | sizes: {0: 2405184, 1: 2405184, 6: 2405418, 11: 2405446, 7037: 2432510, 7038: 2441451, 7039: 2441635, 7047: 2441805}
[2025-06-04 08:28:07] 2025-06-04 12:27:54,173 | INFO     | --------------------------------------------------
[2025-06-04 08:28:07] 2025-06-04 12:27:54,173 | INFO     | 
[2025-06-04 08:28:07] 2025-06-04 12:27:54,173 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:28:07] 2025-06-04 12:27:54,199 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,203 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:28:07] 2025-06-04 12:27:54,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:28:07] 2025-06-04 12:27:54,204 | INFO     | job 6678362629 has completed (purged errors)
[2025-06-04 08:28:07] 2025-06-04 12:27:54,204 | INFO     | overall cleanup function is called
[2025-06-04 08:28:07] 2025-06-04 12:27:55,212 | INFO     | --- collectZombieJob: --- 10, [5802]
[2025-06-04 08:28:07] 2025-06-04 12:27:55,212 | INFO     | zombie collector waiting for pid 5802
[2025-06-04 08:28:07] 2025-06-04 12:27:55,213 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:28:07] 2025-06-04 12:27:55,213 | INFO     | collected zombie processes
[2025-06-04 08:28:07] 2025-06-04 12:27:55,213 | INFO     | will attempt to kill all subprocesses of pid=5802
[2025-06-04 08:28:07] 2025-06-04 12:27:55,308 | INFO     | process IDs to be killed: [5802] (in reverse order)
[2025-06-04 08:28:07] 2025-06-04 12:27:55,366 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:28:07] 2025-06-04 12:27:55,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:28:07] 2025-06-04 12:27:55,371 | INFO     | did not find any defunct processes belonging to 5802
[2025-06-04 08:28:07] 2025-06-04 12:27:55,375 | INFO     | did not find any defunct processes belonging to 5802
[2025-06-04 08:28:07] 2025-06-04 12:27:55,375 | INFO     | ready for new job
[2025-06-04 08:28:07] 2025-06-04 12:27:55,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:28:07] 2025-06-04 12:27:55,377 | INFO     | **************************************
[2025-06-04 08:28:07] 2025-06-04 12:27:55,377 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:28:07] 2025-06-04 12:27:55,377 | INFO     | **************************************
[2025-06-04 08:28:07] 2025-06-04 12:27:55,377 | INFO     | 
[2025-06-04 08:28:07] 2025-06-04 12:27:55,378 | INFO     | architecture information:
[2025-06-04 08:28:07] 2025-06-04 12:27:55,378 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:28:07] 2025-06-04 12:27:55,396 | INFO     | cat /etc/os-release:
[2025-06-04 08:28:07] NAME="CentOS Linux"
[2025-06-04 08:28:07] VERSION="7 (Core)"
[2025-06-04 08:28:07] ID="centos"
[2025-06-04 08:28:07] ID_LIKE="rhel fedora"
[2025-06-04 08:28:07] VERSION_ID="7"
[2025-06-04 08:28:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:28:07] ANSI_COLOR="0;31"
[2025-06-04 08:28:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:28:07] HOME_URL="https://www.centos.org/"
[2025-06-04 08:28:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:28:07] 
[2025-06-04 08:28:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:28:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:28:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:28:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:28:07] 
[2025-06-04 08:28:07] 2025-06-04 12:27:55,396 | INFO     | **************************************
[2025-06-04 08:28:07] 2025-06-04 12:27:55,899 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:28:07] 2025-06-04 12:27:55,918 | INFO     | sufficient remaining disk space (18643681280 B)
[2025-06-04 08:28:07] 2025-06-04 12:27:55,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:28:07] 2025-06-04 12:27:55,919 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:28:07] 2025-06-04 12:27:55,919 | INFO     | update_server=False
[2025-06-04 08:28:07] 2025-06-04 12:27:55,919 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:28:07] 2025-06-04 12:27:55,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:28:07] 2025-06-04 12:27:56,287 | INFO     | all data control threads have been joined
[2025-06-04 08:28:07] 2025-06-04 12:27:56,419 | INFO     | all payload control threads have been joined
[2025-06-04 08:28:07] 2025-06-04 12:27:56,580 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:28:07] 2025-06-04 12:27:56,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:28:07] 2025-06-04 12:27:56,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:28:07] 2025-06-04 12:27:56,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:28:07] 2025-06-04 12:27:56,804 | INFO     | aborting loop
[2025-06-04 08:28:07] 2025-06-04 12:27:56,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:28:07] 2025-06-04 12:27:56,925 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:57,014 | INFO     | all job control threads have been joined
[2025-06-04 08:28:07] 2025-06-04 12:27:57,113 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:57,113 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:57,114 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:57,293 | INFO     | [data] control thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:57,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:57,393 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:57,425 | INFO     | [payload] control thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:57,810 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:57,849 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:57,924 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:58,019 | INFO     | [job] control thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:58,048 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:58,269 | INFO     | [job] validate thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:27:58,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:28:07] 2025-06-04 12:27:59,864 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:28:00,857 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:28:07] 2025-06-04 12:28:02,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393797166912)>', '<ExcThread(monitor, started 140393035306752)>']
[2025-06-04 08:28:07] 2025-06-04 12:28:02,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:28:07] 2025-06-04 12:28:02,612 | INFO     | [monitor] control thread has ended
[2025-06-04 08:28:07] 2025-06-04 12:28:07,521 | INFO     | all workflow threads have been joined
[2025-06-04 08:28:07] 2025-06-04 12:28:07,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:28:07] 2025-06-04 12:28:07,532 | INFO     | traces error code: 0
[2025-06-04 08:28:07] 2025-06-04 12:28:07,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:28:07] 2025-06-04 12:28:07,652 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:28:07] 2025-06-04 12:28:07,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:28:07] 2025-06-04 12:28:07,661 [wrapper] pilotpid: 31642
[2025-06-04 08:28:07] 2025-06-04 12:28:07,666 [wrapper] Pilot exit status: 0
[2025-06-04 08:28:07] 2025-06-04 12:28:07,685 [wrapper] pandaids: 6678362629
[2025-06-04 08:28:07] 2025-06-04 12:28:07,732 [wrapper] cleanup supervisor_pilot 22613 31643
[2025-06-04 08:28:07] 2025-06-04 12:28:07,737 [wrapper] Test setup, not cleaning
[2025-06-04 08:28:07] 2025-06-04 12:28:07,742 [wrapper] apfmon messages muted
[2025-06-04 08:28:07] 2025-06-04 12:28:07,746 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:28:07] 2025-06-04 12:28:07,751 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:28:07]  *** Error codes and diagnostics ***
[2025-06-04 08:28:07]     "exeErrorCode": 0,
[2025-06-04 08:28:07]     "exeErrorDiag": "",
[2025-06-04 08:28:07]     "pilotErrorCode": 0,
[2025-06-04 08:28:07]     "pilotErrorDiag": "",
[2025-06-04 08:28:07]  *** Listing of results directory ***
[2025-06-04 08:28:07] total 393744
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 01:13 queuedata.json
[2025-06-04 08:28:07] -rwx------ 1 boincer umatlas     37140 Jun  4 01:16 runpilot2-wrapper.sh
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:28:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:29 run_atlas
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:29 job.xml
[2025-06-04 08:28:07] -rw-r--r-- 2 boincer umatlas 215833839 Jun  4 06:29 EVNT.45006593._002126.pool.root.1
[2025-06-04 08:28:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:29 start_atlas.sh
[2025-06-04 08:28:07] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:29 shared
[2025-06-04 08:28:07] -rw-r--r-- 2 boincer umatlas    508886 Jun  4 06:29 input.tar.gz
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:29 boinc_lockfile
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 06:29 pandaJob.out
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas    986812 Jun  4 06:30 agis_schedconf.cvmfs.json
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas   1603667 Jun  4 06:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:28:07] drwx------ 4 boincer umatlas      4096 Jun  4 06:30 pilot3
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 08:20 init_data.xml
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas 181571812 Jun  4 08:27 HITS.45006595._053124.pool.root.1
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas      1051 Jun  4 08:27 memory_monitor_summary.json
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:27 boinc_mmap_file
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:27 wrapper_checkpoint.txt
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:27 boinc_task_state.xml
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas    330752 Jun  4 08:27 log.45006595._053124.job.log.tgz.1
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas        95 Jun  4 08:27 pilot_heartbeat.json
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas      7753 Jun  4 08:27 heartbeat.json
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas      4353 Jun  4 08:28 pilotlog.txt
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas    646721 Jun  4 08:28 log.45006595._053124.job.log.1
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas       357 Jun  4 08:28 output.list
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:28 runtime_log
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas    993280 Jun  4 08:28 result.tar.gz
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 08:28 runtime_log.err
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas       659 Jun  4 08:28 8byMDmbfvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4LnKDm2cCMqm.diag
[2025-06-04 08:28:07] -rw-r--r-- 1 boincer umatlas     20765 Jun  4 08:28 stderr.txt
[2025-06-04 08:28:07] HITS file was successfully produced:
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas 181571812 Jun  4 08:27 shared/HITS.pool.root.1
[2025-06-04 08:28:07]  *** Contents of shared directory: ***
[2025-06-04 08:28:07] total 389592
[2025-06-04 08:28:07] -rw-r--r-- 2 boincer umatlas 215833839 Jun  4 06:29 ATLAS.root_0
[2025-06-04 08:28:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:29 start_atlas.sh
[2025-06-04 08:28:07] -rw-r--r-- 2 boincer umatlas    508886 Jun  4 06:29 input.tar.gz
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas 181571812 Jun  4 08:27 HITS.pool.root.1
[2025-06-04 08:28:07] -rw------- 1 boincer umatlas    993280 Jun  4 08:28 result.tar.gz
08:28:09 (27859): run_atlas exited; CPU time 51385.102590
08:28:09 (27859): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN