Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:10:01 (1989818): wrapper (7.7.26015): starting
07:10:01 (1989818): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 07:10:01] Arguments: --nthreads 12
[2025-06-04 07:10:01] Threads: 12
[2025-06-04 07:10:01] Checking for CVMFS
[2025-06-04 07:10:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:10:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:10:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:10:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:10:02] 2.12.6.0 5181 688 111604 146778 0 104 27756748 32935936 8638 16776704 0 4679754 99.617 3791190 29199 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 07:10:02] CVMFS is ok
[2025-06-04 07:10:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:10:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:10:02] Further information can be found at the LHC@home message board.
[2025-06-04 07:10:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:10:02] Checking for apptainer binary...
[2025-06-04 07:10:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:10:02] Running /usr/bin/apptainer --version
[2025-06-04 07:10:02] apptainer version 1.4.1-1.el9
[2025-06-04 07:10:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:10:02] c6-1-24-3.aglt2.org
[2025-06-04 07:10:02] apptainer works
[2025-06-04 07:10:02] Set ATHENA_PROC_NUMBER=12
[2025-06-04 07:10:02] Set ATHENA_CORE_NUMBER=12
[2025-06-04 07:10:02] Starting ATLAS job with PandaID=6678313865
[2025-06-04 07:10:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:01:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:01:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:01:56]  is_altstaged=None
[2025-06-04 08:01:56]  is_tar=False
[2025-06-04 08:01:56]  lfn=log.45006595._052750.job.log.tgz.1
[2025-06-04 08:01:56]  mtime=0
[2025-06-04 08:01:56]  protocol_id=None
[2025-06-04 08:01:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:01:56]  replicas=None
[2025-06-04 08:01:56]  scope=mc23_13p6TeV
[2025-06-04 08:01:56]  status=None
[2025-06-04 08:01:56]  status_code=0
[2025-06-04 08:01:56]  storage_token=
[2025-06-04 08:01:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678313865/log.45006595._052750.job.log.tgz.1
[2025-06-04 08:01:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/19/log.45006595._052750.job.log.tgz.1
[2025-06-04 08:01:56]  workdir=None
[2025-06-04 08:01:56] ]
[2025-06-04 08:01:56] 2025-06-04 12:01:29,696 | INFO     | transferring file log.45006595._052750.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678313865/log.45006595._052750.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 08:01:56] 2025-06-04 12:01:29,696 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678313865/log.45006595._052750.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052750.job
[2025-06-04 08:01:56] 2025-06-04 12:01:29,709 | INFO     | adding to output.list: log.45006595._052750.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/19/log.45006595._052750.job.log.tg
[2025-06-04 08:01:56] 2025-06-04 12:01:29,711 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:01:56] 2025-06-04 12:01:29,711 | INFO     | summary of transferred files:
[2025-06-04 08:01:56] 2025-06-04 12:01:29,711 | INFO     |  -- lfn=log.45006595._052750.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:01:56] 2025-06-04 12:01:29,712 | INFO     | stage-out finished correctly
[2025-06-04 08:01:56] 2025-06-04 12:01:29,779 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:01:56] 2025-06-04 12:01:30,501 | INFO     | monitor loop #234: job 0:6678313865 is in state 'finished'
[2025-06-04 08:01:56] 2025-06-04 12:01:30,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:01:56] 2025-06-04 12:01:30,607 | INFO     | job 6678313865 has state=finished
[2025-06-04 08:01:56] 2025-06-04 12:01:30,607 | INFO     | preparing for final server update for job 6678313865 in state='finished'
[2025-06-04 08:01:56] 2025-06-04 12:01:30,608 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:01:56] 2025-06-04 12:01:30,608 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:01:56] 2025-06-04 12:01:30,608 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:01:56] 2025-06-04 12:01:30,608 | INFO     | job 6678313865 has finished - writing final server update
[2025-06-04 08:01:56] 2025-06-04 12:01:30,609 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:01:56] 2025-06-04 12:01:30,625 | INFO     | executing command: lscpu
[2025-06-04 08:01:56] 2025-06-04 12:01:30,701 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:01:56] 2025-06-04 12:01:33,005 | INFO     | monitor loop #235: job 0:6678313865 is in state 'finished'
[2025-06-04 08:01:56] 2025-06-04 12:01:33,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:01:56] 2025-06-04 12:01:34,729 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:01:56] 2025-06-04 12:01:34,730 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678313865/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:01:56] 2025-06-04 12:01:34,731 | INFO     | extracted standard info from prmon json
[2025-06-04 08:01:56] 2025-06-04 12:01:34,731 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:01:56] 2025-06-04 12:01:34,731 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:01:56] 2025-06-04 12:01:34,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:01:56] 2025-06-04 12:01:34,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:01:56] 2025-06-04 12:01:34,732 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:01:56] 2025-06-04 12:01:34,733 | INFO     | sum of square deviations: 24640462.0
[2025-06-04 08:01:56] 2025-06-04 12:01:34,733 | INFO     | sum of deviations: 6715423876.000002
[2025-06-04 08:01:56] 2025-06-04 12:01:34,733 | INFO     | mean x: 1749037023.0
[2025-06-04 08:01:56] 2025-06-04 12:01:34,733 | INFO     | mean y: 2397556.976744186
[2025-06-04 08:01:56] 2025-06-04 12:01:34,733 | INFO     | -- intersect: -476673931980.2764
[2025-06-04 08:01:56] 2025-06-04 12:01:34,733 | INFO     | intersect: -476673931980.2764
[2025-06-04 08:01:56] 2025-06-04 12:01:34,733 | INFO     | chi2: 0.7672694312196379
[2025-06-04 08:01:56] 2025-06-04 12:01:34,733 | INFO     | -- intersect: -476673931980.2764
[2025-06-04 08:01:56] 2025-06-04 12:01:34,733 | INFO     | current memory leak: 272.54 B/s (using 43 data points, chi2=0.77)
[2025-06-04 08:01:56] 2025-06-04 12:01:34,734 | INFO     | ..............................
[2025-06-04 08:01:56] 2025-06-04 12:01:34,734 | INFO     | . Timing measurements:
[2025-06-04 08:01:56] 2025-06-04 12:01:34,734 | INFO     | . get job = 0 s
[2025-06-04 08:01:56] 2025-06-04 12:01:34,734 | INFO     | . initial setup = 2 s
[2025-06-04 08:01:56] 2025-06-04 12:01:34,734 | INFO     | . payload setup = 6 s
[2025-06-04 08:01:56] 2025-06-04 12:01:34,734 | INFO     | . stage-in = 0 s
[2025-06-04 08:01:56] 2025-06-04 12:01:34,734 | INFO     | . payload execution = 3052 s
[2025-06-04 08:01:56] 2025-06-04 12:01:34,734 | INFO     | . stage-out = 0 s
[2025-06-04 08:01:56] 2025-06-04 12:01:34,734 | INFO     | . log creation = 0 s
[2025-06-04 08:01:56] 2025-06-04 12:01:34,734 | INFO     | ..............................
[2025-06-04 08:01:56] 2025-06-04 12:01:34,796 | INFO     | 
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | job summary report
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | --------------------------------------------------
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | PanDA job id: 6678313865
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | task id: 45006595
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | errors: (none)
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | pilot state: finished 
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | transexitcode: 0
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | exeerrorcode: 0
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | exeerrordiag: 
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | exitcode: 0
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | exitmsg: OK
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | cpuconsumptiontime: 28872 s
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | nevents: 400
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | neventsw: 0
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | pid: 2000974
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | pgrp: 2000974
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | corecount: 12
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | event service: False
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | sizes: {0: 2404957, 1: 2405212, 5: 2405418, 12: 2405474, 3062: 2430862, 3063: 2439987, 3068: 2440101}
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | --------------------------------------------------
[2025-06-04 08:01:56] 2025-06-04 12:01:34,797 | INFO     | 
[2025-06-04 08:01:56] 2025-06-04 12:01:34,798 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:01:56] 2025-06-04 12:01:34,819 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,820 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,821 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:01:56] 2025-06-04 12:01:34,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,821 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:01:56] 2025-06-04 12:01:34,821 | INFO     | job 6678313865 has completed (purged errors)
[2025-06-04 08:01:56] 2025-06-04 12:01:34,821 | INFO     | overall cleanup function is called
[2025-06-04 08:01:56] 2025-06-04 12:01:35,829 | INFO     | --- collectZombieJob: --- 10, [2000974]
[2025-06-04 08:01:56] 2025-06-04 12:01:35,829 | INFO     | zombie collector waiting for pid 2000974
[2025-06-04 08:01:56] 2025-06-04 12:01:35,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:01:56] 2025-06-04 12:01:35,829 | INFO     | collected zombie processes
[2025-06-04 08:01:56] 2025-06-04 12:01:35,829 | INFO     | will attempt to kill all subprocesses of pid=2000974
[2025-06-04 08:01:56] 2025-06-04 12:01:36,461 | INFO     | process IDs to be killed: [2000974] (in reverse order)
[2025-06-04 08:01:56] 2025-06-04 12:01:36,526 | INFO     | PID=1994121 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 08:01:56] 2025-06-04 12:01:36,526 | INFO     | .. there are 8 such processes running
[2025-06-04 08:01:56] 2025-06-04 12:01:36,534 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:01:56] 2025-06-04 12:01:36,534 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:01:56] 2025-06-04 12:01:36,543 | INFO     | did not find any defunct processes belonging to 2000974
[2025-06-04 08:01:56] 2025-06-04 12:01:36,553 | INFO     | did not find any defunct processes belonging to 2000974
[2025-06-04 08:01:56] 2025-06-04 12:01:36,553 | INFO     | ready for new job
[2025-06-04 08:01:56] 2025-06-04 12:01:36,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:01:56] 2025-06-04 12:01:36,555 | INFO     | **************************************
[2025-06-04 08:01:56] 2025-06-04 12:01:36,556 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:01:56] 2025-06-04 12:01:36,556 | INFO     | **************************************
[2025-06-04 08:01:56] 2025-06-04 12:01:36,556 | INFO     | 
[2025-06-04 08:01:56] 2025-06-04 12:01:36,572 | INFO     | architecture information:
[2025-06-04 08:01:56] 2025-06-04 12:01:36,573 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:01:56] 2025-06-04 12:01:36,591 | INFO     | cat /etc/os-release:
[2025-06-04 08:01:56] NAME="CentOS Linux"
[2025-06-04 08:01:56] VERSION="7 (Core)"
[2025-06-04 08:01:56] ID="centos"
[2025-06-04 08:01:56] ID_LIKE="rhel fedora"
[2025-06-04 08:01:56] VERSION_ID="7"
[2025-06-04 08:01:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:01:56] ANSI_COLOR="0;31"
[2025-06-04 08:01:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:01:56] HOME_URL="https://www.centos.org/"
[2025-06-04 08:01:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:01:56] 
[2025-06-04 08:01:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:01:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:01:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:01:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:01:56] 
[2025-06-04 08:01:56] 2025-06-04 12:01:36,591 | INFO     | **************************************
[2025-06-04 08:01:56] 2025-06-04 12:01:37,094 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:01:56] 2025-06-04 12:01:37,108 | INFO     | sufficient remaining disk space (76385615872 B)
[2025-06-04 08:01:56] 2025-06-04 12:01:37,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:01:56] 2025-06-04 12:01:37,108 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:01:56] 2025-06-04 12:01:37,108 | INFO     | update_server=False
[2025-06-04 08:01:56] 2025-06-04 12:01:37,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:01:56] 2025-06-04 12:01:37,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:01:56] 2025-06-04 12:01:37,109 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:01:56] 2025-06-04 12:01:37,109 | INFO     | aborting loop
[2025-06-04 08:01:56] 2025-06-04 12:01:37,110 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:01:56] 2025-06-04 12:01:37,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:01:56] 2025-06-04 12:01:37,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:01:56] 2025-06-04 12:01:37,320 | INFO     | all data control threads have been joined
[2025-06-04 08:01:56] 2025-06-04 12:01:37,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:01:56] 2025-06-04 12:01:37,926 | INFO     | all job control threads have been joined
[2025-06-04 08:01:56] 2025-06-04 12:01:38,113 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:38,115 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:38,158 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:38,304 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:38,325 | INFO     | [data] control thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:38,382 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:38,434 | INFO     | all payload control threads have been joined
[2025-06-04 08:01:56] 2025-06-04 12:01:38,894 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:38,931 | INFO     | [job] control thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:39,268 | INFO     | [job] validate thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:39,414 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:39,440 | INFO     | [payload] control thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:39,592 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:39,796 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:39,807 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:01:56] 2025-06-04 12:01:40,373 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:01:56] 2025-06-04 12:01:40,812 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:44,378 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:47,946 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:01:56] 2025-06-04 12:01:48,950 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:01:56] 2025-06-04 12:01:50,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309037455168)>', '<ExcThread(monitor, started 140308687857408)>']
[2025-06-04 08:01:56] 2025-06-04 12:01:51,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:01:56] 2025-06-04 12:01:51,176 | INFO     | [monitor] control thread has ended
[2025-06-04 08:01:56] 2025-06-04 12:01:55,921 | INFO     | all workflow threads have been joined
[2025-06-04 08:01:56] 2025-06-04 12:01:55,922 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:01:56] 2025-06-04 12:01:55,923 | INFO     | traces error code: 0
[2025-06-04 08:01:56] 2025-06-04 12:01:55,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:01:56] 2025-06-04 12:01:56,063 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:01:56] 2025-06-04 12:01:56,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:01:56] 2025-06-04 12:01:56,068 [wrapper] pilotpid: 1994121
[2025-06-04 08:01:56] 2025-06-04 12:01:56,070 [wrapper] Pilot exit status: 0
[2025-06-04 08:01:56] 2025-06-04 12:01:56,077 [wrapper] pandaids: 6678313865
[2025-06-04 08:01:56] 2025-06-04 12:01:56,125 [wrapper] cleanup supervisor_pilot 2106228 1994122
[2025-06-04 08:01:56] 2025-06-04 12:01:56,129 [wrapper] Test setup, not cleaning
[2025-06-04 08:01:56] 2025-06-04 12:01:56,132 [wrapper] apfmon messages muted
[2025-06-04 08:01:56] 2025-06-04 12:01:56,136 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:01:56] 2025-06-04 12:01:56,139 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:01:56]  *** Error codes and diagnostics ***
[2025-06-04 08:01:56]     "exeErrorCode": 0,
[2025-06-04 08:01:56]     "exeErrorDiag": "",
[2025-06-04 08:01:56]     "pilotErrorCode": 0,
[2025-06-04 08:01:56]     "pilotErrorDiag": "",
[2025-06-04 08:01:56]  *** Listing of results directory ***
[2025-06-04 08:01:56] total 388348
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:01 queuedata.json
[2025-06-04 08:01:56] -rwx------. 1 boincer umatlas     37140 Jun  4 01:01 runpilot2-wrapper.sh
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas       100 Jun  4 07:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:01:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 07:10 run_atlas
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas       105 Jun  4 07:10 job.xml
[2025-06-04 08:01:56] -rw-r--r--. 2 boincer umatlas 214150438 Jun  4 07:10 EVNT.45006593._002112.pool.root.1
[2025-06-04 08:01:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:10 start_atlas.sh
[2025-06-04 08:01:56] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 07:10 shared
[2025-06-04 08:01:56] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 07:10 input.tar.gz
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas         0 Jun  4 07:10 boinc_lockfile
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 07:10 pandaJob.out
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas    986812 Jun  4 07:10 agis_schedconf.cvmfs.json
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas   1603667 Jun  4 07:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:01:56] drwx------. 4 boincer umatlas      4096 Jun  4 07:10 pilot3
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 07:58 init_data.xml
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas        95 Jun  4 08:00 pilot_heartbeat.json
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas 178308596 Jun  4 08:01 HITS.45006595._052750.pool.root.1
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas       529 Jun  4 08:01 boinc_task_state.xml
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas      1048 Jun  4 08:01 memory_monitor_summary.json
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas    361301 Jun  4 08:01 log.45006595._052750.job.log.tgz.1
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas      7716 Jun  4 08:01 heartbeat.json
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:01 boinc_mmap_file
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas        27 Jun  4 08:01 wrapper_checkpoint.txt
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas      4548 Jun  4 08:01 pilotlog.txt
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas    325028 Jun  4 08:01 log.45006595._052750.job.log.1
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas       357 Jun  4 08:01 output.list
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:01 runtime_log
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas    706560 Jun  4 08:01 result.tar.gz
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 08:01 runtime_log.err
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas       652 Jun  4 08:01 oCLLDmwQvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmRjaKDmDLbVOm.diag
[2025-06-04 08:01:56] -rw-r--r--. 1 boincer umatlas     21424 Jun  4 08:01 stderr.txt
[2025-06-04 08:01:56] HITS file was successfully produced:
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas 178308596 Jun  4 08:01 shared/HITS.pool.root.1
[2025-06-04 08:01:56]  *** Contents of shared directory: ***
[2025-06-04 08:01:56] total 384476
[2025-06-04 08:01:56] -rw-r--r--. 2 boincer umatlas 214150438 Jun  4 07:10 ATLAS.root_0
[2025-06-04 08:01:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 07:10 start_atlas.sh
[2025-06-04 08:01:56] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 07:10 input.tar.gz
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas 178308596 Jun  4 08:01 HITS.pool.root.1
[2025-06-04 08:01:56] -rw-------. 1 boincer umatlas    706560 Jun  4 08:01 result.tar.gz
08:01:57 (1989818): run_atlas exited; CPU time 28914.241412
08:01:57 (1989818): called boinc_finish(0)

</stderr_txt>
]]>

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