Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:16:26 (2155626): wrapper (7.7.26015): starting
06:16:26 (2155626): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:16:26] Arguments: --nthreads 8
[2025-06-04 06:16:26] Threads: 8
[2025-06-04 06:16:26] Checking for CVMFS
[2025-06-04 06:16:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:16:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:16:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:16:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:16:26] 2.12.6.0 863165 32667 471776 146777 3 232 40201988 40960001 18344 16776704 1 150265762 99.684 133693143 27656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:16:26] CVMFS is ok
[2025-06-04 06:16:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:16:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:16:26] Further information can be found at the LHC@home message board.
[2025-06-04 06:16:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:16:26] Checking for apptainer binary...
[2025-06-04 06:16:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:16:26] Running /usr/bin/apptainer --version
[2025-06-04 06:16:26] apptainer version 1.4.1-1.el9
[2025-06-04 06:16:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:16:26] c7-11-14.aglt2.org
[2025-06-04 06:16:26] apptainer works
[2025-06-04 06:16:26] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:16:26] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:16:26] Starting ATLAS job with PandaID=6678362710
[2025-06-04 06:16:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:28:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:28:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 07:28:19]  is_altstaged=None
[2025-06-04 07:28:19]  is_tar=False
[2025-06-04 07:28:19]  lfn=log.45006595._053205.job.log.tgz.1
[2025-06-04 07:28:19]  mtime=0
[2025-06-04 07:28:19]  protocol_id=None
[2025-06-04 07:28:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:28:19]  replicas=None
[2025-06-04 07:28:19]  scope=mc23_13p6TeV
[2025-06-04 07:28:19]  status=None
[2025-06-04 07:28:19]  status_code=0
[2025-06-04 07:28:19]  storage_token=
[2025-06-04 07:28:19]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678362710/log.45006595._053205.job.log.tgz.1
[2025-06-04 07:28:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/54/log.45006595._053205.job.log.tgz.1
[2025-06-04 07:28:19]  workdir=None
[2025-06-04 07:28:19] ]
[2025-06-04 07:28:19] 2025-06-04 11:27:51,292 | INFO     | transferring file log.45006595._053205.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678362710/log.45006595._053205.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:28:19] 2025-06-04 11:27:51,293 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678362710/log.45006595._053205.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._053205.job
[2025-06-04 07:28:19] 2025-06-04 11:27:51,320 | INFO     | adding to output.list: log.45006595._053205.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/54/log.45006595._053205.job.log.tg
[2025-06-04 07:28:19] 2025-06-04 11:27:51,321 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:28:19] 2025-06-04 11:27:51,322 | INFO     | summary of transferred files:
[2025-06-04 07:28:19] 2025-06-04 11:27:51,322 | INFO     |  -- lfn=log.45006595._053205.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:28:19] 2025-06-04 11:27:51,322 | INFO     | stage-out finished correctly
[2025-06-04 07:28:19] 2025-06-04 11:27:53,412 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:28:19] 2025-06-04 11:27:54,211 | INFO     | job 6678362710 has state=finished
[2025-06-04 07:28:19] 2025-06-04 11:27:54,212 | INFO     | preparing for final server update for job 6678362710 in state='finished'
[2025-06-04 07:28:19] 2025-06-04 11:27:54,212 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:28:19] 2025-06-04 11:27:54,212 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:28:19] 2025-06-04 11:27:54,212 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:28:19] 2025-06-04 11:27:54,212 | INFO     | job 6678362710 has finished - writing final server update
[2025-06-04 07:28:19] 2025-06-04 11:27:54,213 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:28:19] 2025-06-04 11:27:54,217 | INFO     | executing command: lscpu
[2025-06-04 07:28:19] 2025-06-04 11:27:54,288 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:28:19] 2025-06-04 11:27:55,244 | WARNING  | process 2173611 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:28:19] 2025-06-04 11:27:55,244 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678362710/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:28:19] 2025-06-04 11:27:55,571 | INFO     | number of running child processes to parent process 2173611: 1
[2025-06-04 07:28:19] 2025-06-04 11:27:55,572 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:28:19] 2025-06-04 11:27:58,075 | INFO     | monitor loop #314: job 0:6678362710 is in state 'finished'
[2025-06-04 07:28:19] 2025-06-04 11:27:58,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:28:19] 2025-06-04 11:27:58,690 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:28:19] 2025-06-04 11:27:58,690 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678362710/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:28:19] 2025-06-04 11:27:58,691 | INFO     | extracted standard info from prmon json
[2025-06-04 07:28:19] 2025-06-04 11:27:58,691 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:28:19] 2025-06-04 11:27:58,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:28:19] 2025-06-04 11:27:58,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:28:19] 2025-06-04 11:27:58,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:28:19] 2025-06-04 11:27:58,693 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:28:19] 2025-06-04 11:27:58,693 | INFO     | sum of square deviations: 77515872.0
[2025-06-04 07:28:19] 2025-06-04 11:27:58,693 | INFO     | sum of deviations: 5750514164.0
[2025-06-04 07:28:19] 2025-06-04 11:27:58,693 | INFO     | mean x: 1749034421.0
[2025-06-04 07:28:19] 2025-06-04 11:27:58,693 | INFO     | mean y: 2237473.746031746
[2025-06-04 07:28:19] 2025-06-04 11:27:58,693 | INFO     | -- intersect: -129749862990.06657
[2025-06-04 07:28:19] 2025-06-04 11:27:58,693 | INFO     | intersect: -129749862990.06657
[2025-06-04 07:28:19] 2025-06-04 11:27:58,693 | INFO     | chi2: 0.8694432686924315
[2025-06-04 07:28:19] 2025-06-04 11:27:58,694 | INFO     | -- intersect: -129749862990.06657
[2025-06-04 07:28:19] 2025-06-04 11:27:58,694 | INFO     | current memory leak: 74.18 B/s (using 63 data points, chi2=0.87)
[2025-06-04 07:28:19] 2025-06-04 11:27:58,694 | INFO     | ..............................
[2025-06-04 07:28:19] 2025-06-04 11:27:58,694 | INFO     | . Timing measurements:
[2025-06-04 07:28:19] 2025-06-04 11:27:58,694 | INFO     | . get job = 0 s
[2025-06-04 07:28:19] 2025-06-04 11:27:58,694 | INFO     | . initial setup = 2 s
[2025-06-04 07:28:19] 2025-06-04 11:27:58,694 | INFO     | . payload setup = 6 s
[2025-06-04 07:28:19] 2025-06-04 11:27:58,694 | INFO     | . stage-in = 0 s
[2025-06-04 07:28:19] 2025-06-04 11:27:58,694 | INFO     | . payload execution = 4248 s
[2025-06-04 07:28:19] 2025-06-04 11:27:58,694 | INFO     | . stage-out = 0 s
[2025-06-04 07:28:19] 2025-06-04 11:27:58,695 | INFO     | . log creation = 0 s
[2025-06-04 07:28:19] 2025-06-04 11:27:58,695 | INFO     | ..............................
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | 
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | job summary report
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | --------------------------------------------------
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | PanDA job id: 6678362710
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | task id: 45006595
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | errors: (none)
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | pilot state: finished 
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | transexitcode: 0
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | exeerrorcode: 0
[2025-06-04 07:28:19] 2025-06-04 11:27:58,775 | INFO     | exeerrordiag: 
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | exitcode: 0
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | exitmsg: OK
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | cpuconsumptiontime: 27512 s
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | nevents: 400
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | neventsw: 0
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | pid: 2173611
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | pgrp: 2173611
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | corecount: 8
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | event service: False
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 4255: 2431384, 4257: 2440325, 4259: 2440509, 4265: 2440679}
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | --------------------------------------------------
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | 
[2025-06-04 07:28:19] 2025-06-04 11:27:58,776 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 07:28:19] 2025-06-04 11:27:58,799 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,799 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,801 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,801 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:28:19] 2025-06-04 11:27:58,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,801 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:28:19] 2025-06-04 11:27:58,801 | INFO     | job 6678362710 has completed (purged errors)
[2025-06-04 07:28:19] 2025-06-04 11:27:58,801 | INFO     | overall cleanup function is called
[2025-06-04 07:28:19] 2025-06-04 11:27:59,810 | INFO     | --- collectZombieJob: --- 10, [2173611]
[2025-06-04 07:28:19] 2025-06-04 11:27:59,810 | INFO     | zombie collector waiting for pid 2173611
[2025-06-04 07:28:19] 2025-06-04 11:27:59,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:28:19] 2025-06-04 11:27:59,810 | INFO     | collected zombie processes
[2025-06-04 07:28:19] 2025-06-04 11:27:59,811 | INFO     | will attempt to kill all subprocesses of pid=2173611
[2025-06-04 07:28:19] 2025-06-04 11:28:00,147 | INFO     | process IDs to be killed: [2173611] (in reverse order)
[2025-06-04 07:28:19] 2025-06-04 11:28:00,280 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:28:19] 2025-06-04 11:28:00,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:28:19] 2025-06-04 11:28:00,295 | INFO     | did not find any defunct processes belonging to 2173611
[2025-06-04 07:28:19] 2025-06-04 11:28:00,307 | INFO     | did not find any defunct processes belonging to 2173611
[2025-06-04 07:28:19] 2025-06-04 11:28:00,308 | INFO     | ready for new job
[2025-06-04 07:28:19] 2025-06-04 11:28:00,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:28:19] 2025-06-04 11:28:00,310 | INFO     | **************************************
[2025-06-04 07:28:19] 2025-06-04 11:28:00,310 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:28:19] 2025-06-04 11:28:00,310 | INFO     | **************************************
[2025-06-04 07:28:19] 2025-06-04 11:28:00,310 | INFO     | 
[2025-06-04 07:28:19] 2025-06-04 11:28:00,324 | INFO     | architecture information:
[2025-06-04 07:28:19] 2025-06-04 11:28:00,325 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:28:19] 2025-06-04 11:28:00,337 | INFO     | cat /etc/os-release:
[2025-06-04 07:28:19] NAME="CentOS Linux"
[2025-06-04 07:28:19] VERSION="7 (Core)"
[2025-06-04 07:28:19] ID="centos"
[2025-06-04 07:28:19] ID_LIKE="rhel fedora"
[2025-06-04 07:28:19] VERSION_ID="7"
[2025-06-04 07:28:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:28:19] ANSI_COLOR="0;31"
[2025-06-04 07:28:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:28:19] HOME_URL="https://www.centos.org/"
[2025-06-04 07:28:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:28:19] 
[2025-06-04 07:28:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:28:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:28:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:28:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:28:19] 
[2025-06-04 07:28:19] 2025-06-04 11:28:00,337 | INFO     | **************************************
[2025-06-04 07:28:19] 2025-06-04 11:28:00,840 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 07:28:19] 2025-06-04 11:28:00,861 | INFO     | sufficient remaining disk space (85901443072 B)
[2025-06-04 07:28:19] 2025-06-04 11:28:00,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:28:19] 2025-06-04 11:28:00,862 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:28:19] 2025-06-04 11:28:00,862 | INFO     | update_server=False
[2025-06-04 07:28:19] 2025-06-04 11:28:00,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:28:19] 2025-06-04 11:28:00,862 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:28:19] 2025-06-04 11:28:00,863 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:28:19] 2025-06-04 11:28:00,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:28:19] 2025-06-04 11:28:00,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:28:19] 2025-06-04 11:28:01,003 | INFO     | all data control threads have been joined
[2025-06-04 07:28:19] 2025-06-04 11:28:01,466 | INFO     | all payload control threads have been joined
[2025-06-04 07:28:19] 2025-06-04 11:28:01,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:28:19] 2025-06-04 11:28:01,583 | INFO     | aborting loop
[2025-06-04 07:28:19] 2025-06-04 11:28:01,867 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:01,869 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:01,897 | INFO     | all job control threads have been joined
[2025-06-04 07:28:19] 2025-06-04 11:28:01,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:28:19] 2025-06-04 11:28:02,008 | INFO     | [data] control thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:02,342 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:02,471 | INFO     | [payload] control thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:02,588 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:02,884 | INFO     | [job] validate thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:02,902 | INFO     | [job] control thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:03,143 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:03,145 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:03,249 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:03,358 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:03,791 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:28:19] 2025-06-04 11:28:03,934 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:04,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:28:19] 2025-06-04 11:28:04,791 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:08,019 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:11,300 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:28:19] 2025-06-04 11:28:12,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:28:19] 2025-06-04 11:28:13,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341346707264)>', '<ExcThread(monitor, started 140340254201600)>']
[2025-06-04 07:28:19] 2025-06-04 11:28:13,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:28:19] 2025-06-04 11:28:13,918 | INFO     | [monitor] control thread has ended
[2025-06-04 07:28:19] 2025-06-04 11:28:18,907 | INFO     | all workflow threads have been joined
[2025-06-04 07:28:19] 2025-06-04 11:28:18,908 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:28:19] 2025-06-04 11:28:18,909 | INFO     | traces error code: 0
[2025-06-04 07:28:19] 2025-06-04 11:28:18,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:28:19] 2025-06-04 11:28:19,079 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:28:19] 2025-06-04 11:28:19,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:28:19] 2025-06-04 11:28:19,086 [wrapper] pilotpid: 2161877
[2025-06-04 07:28:19] 2025-06-04 11:28:19,090 [wrapper] Pilot exit status: 0
[2025-06-04 07:28:19] 2025-06-04 11:28:19,103 [wrapper] pandaids: 6678362710
[2025-06-04 07:28:19] 2025-06-04 11:28:19,198 [wrapper] cleanup supervisor_pilot 2606343 2161878
[2025-06-04 07:28:19] 2025-06-04 11:28:19,202 [wrapper] Test setup, not cleaning
[2025-06-04 07:28:19] 2025-06-04 11:28:19,204 [wrapper] apfmon messages muted
[2025-06-04 07:28:19] 2025-06-04 11:28:19,208 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:28:19] 2025-06-04 11:28:19,211 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:28:19]  *** Error codes and diagnostics ***
[2025-06-04 07:28:19]     "exeErrorCode": 0,
[2025-06-04 07:28:19]     "exeErrorDiag": "",
[2025-06-04 07:28:19]     "pilotErrorCode": 0,
[2025-06-04 07:28:19]     "pilotErrorDiag": "",
[2025-06-04 07:28:19]  *** Listing of results directory ***
[2025-06-04 07:28:19] total 390008
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:17 queuedata.json
[2025-06-04 07:28:19] -rwx------. 1 boincer umatlas     37140 Jun  4 01:18 runpilot2-wrapper.sh
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:28:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:16 run_atlas
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:16 job.xml
[2025-06-04 07:28:19] -rw-r--r--. 2 boincer umatlas 218725922 Jun  4 06:16 EVNT.45006593._002129.pool.root.1
[2025-06-04 07:28:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:16 start_atlas.sh
[2025-06-04 07:28:19] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:16 shared
[2025-06-04 07:28:19] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 06:16 input.tar.gz
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:16 boinc_lockfile
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 06:16 pandaJob.out
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas    986812 Jun  4 06:16 agis_schedconf.cvmfs.json
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:16 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:28:19] drwx------. 4 boincer umatlas      4096 Jun  4 06:16 pilot3
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas      6896 Jun  4 07:18 init_data.xml
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas        95 Jun  4 07:27 pilot_heartbeat.json
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:27 boinc_task_state.xml
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas 175333036 Jun  4 07:27 HITS.45006595._053205.pool.root.1
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas      1032 Jun  4 07:27 memory_monitor_summary.json
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas    315446 Jun  4 07:27 log.45006595._053205.job.log.tgz.1
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas      7690 Jun  4 07:27 heartbeat.json
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:28 boinc_mmap_file
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:28 wrapper_checkpoint.txt
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas      4548 Jun  4 07:28 pilotlog.txt
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas    424903 Jun  4 07:28 log.45006595._053205.job.log.1
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas       357 Jun  4 07:28 output.list
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:28 runtime_log
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas    757760 Jun  4 07:28 result.tar.gz
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 07:28 runtime_log.err
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas       653 Jun  4 07:28 OquLDmvgvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUlaKDmI1z4Bn.diag
[2025-06-04 07:28:19] -rw-r--r--. 1 boincer umatlas     21381 Jun  4 07:28 stderr.txt
[2025-06-04 07:28:19] HITS file was successfully produced:
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas 175333036 Jun  4 07:27 shared/HITS.pool.root.1
[2025-06-04 07:28:19]  *** Contents of shared directory: ***
[2025-06-04 07:28:19] total 386084
[2025-06-04 07:28:19] -rw-r--r--. 2 boincer umatlas 218725922 Jun  4 06:16 ATLAS.root_0
[2025-06-04 07:28:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:16 start_atlas.sh
[2025-06-04 07:28:19] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 06:16 input.tar.gz
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas 175333036 Jun  4 07:27 HITS.pool.root.1
[2025-06-04 07:28:19] -rw-------. 1 boincer umatlas    757760 Jun  4 07:28 result.tar.gz
07:28:20 (2155626): run_atlas exited; CPU time 27563.607781
07:28:20 (2155626): called boinc_finish(0)

</stderr_txt>
]]>

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