Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:36:34 (1721077): wrapper (7.7.26015): starting
02:36:34 (1721077): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 02:36:34] Arguments: --nthreads 12
[2025-06-06 02:36:34] Threads: 12
[2025-06-06 02:36:34] Checking for CVMFS
[2025-06-06 02:36:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 02:36:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 02:36:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 02:36:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 02:36:34] 2.12.7.0 3695 1757 52316 146840 3 56 3886823 4096001 2736 130560 0 4750087 99.997 401886 115 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 02:36:34] CVMFS is ok
[2025-06-06 02:36:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 02:36:34] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 02:36:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 02:36:34] Further information can be found at the LHC@home message board.
[2025-06-06 02:36:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 02:36:34] Checking for apptainer binary...
[2025-06-06 02:36:34] apptainer is not installed, using version from CVMFS
[2025-06-06 02:36:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 02:36:35] dualxeon2
[2025-06-06 02:36:35] apptainer works
[2025-06-06 02:36:35] Set ATHENA_PROC_NUMBER=12
[2025-06-06 02:36:35] Set ATHENA_CORE_NUMBER=12
[2025-06-06 02:36:35] Starting ATLAS job with PandaID=6678314011
[2025-06-06 02:36:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 04:11:29]  *** The last 200 lines of the pilot log: ***
[2025-06-06 04:11:29]  is_tar=False
[2025-06-06 04:11:29]  lfn=log.45006595._052896.job.log.tgz.1
[2025-06-06 04:11:29]  mtime=0
[2025-06-06 04:11:29]  protocol_id=None
[2025-06-06 04:11:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 04:11:29]  replicas=None
[2025-06-06 04:11:29]  scope=mc23_13p6TeV
[2025-06-06 04:11:29]  status=None
[2025-06-06 04:11:29]  status_code=0
[2025-06-06 04:11:29]  storage_token=
[2025-06-06 04:11:29]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6678314011/log.45006595._052896.job.log.tgz.1
[2025-06-06 04:11:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/53/log.45006595._052896.job.log.tgz.1
[2025-06-06 04:11:29]  workdir=None
[2025-06-06 04:11:29] ]
[2025-06-06 04:11:29] 2025-06-06 04:11:05,643 | INFO     | transferring file log.45006595._052896.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6678314011/log.45006595._052896.job.log.tgz.1 to /var/lib/boinc
[2025-06-06 04:11:29] 2025-06-06 04:11:05,643 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6678314011/log.45006595._052896.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-06 04:11:29] 2025-06-06 04:11:05,668 | INFO     | adding to output.list: log.45006595._052896.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/53/log.45006595._052896.job.log.tg
[2025-06-06 04:11:29] 2025-06-06 04:11:05,669 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 04:11:29] 2025-06-06 04:11:05,669 | INFO     | summary of transferred files:
[2025-06-06 04:11:29] 2025-06-06 04:11:05,669 | INFO     |  -- lfn=log.45006595._052896.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 04:11:29] 2025-06-06 04:11:05,670 | INFO     | stage-out finished correctly
[2025-06-06 04:11:29] 2025-06-06 04:11:06,041 | INFO     | monitor loop #420: job 0:6678314011 is in state 'finished'
[2025-06-06 04:11:29] 2025-06-06 04:11:06,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:11:29] 2025-06-06 04:11:07,762 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 04:11:29] 2025-06-06 04:11:07,906 | INFO     | job 6678314011 has state=finished
[2025-06-06 04:11:29] 2025-06-06 04:11:07,906 | INFO     | preparing for final server update for job 6678314011 in state='finished'
[2025-06-06 04:11:29] 2025-06-06 04:11:07,907 | INFO     | this job has now completed (state=finished)
[2025-06-06 04:11:29] 2025-06-06 04:11:07,907 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 04:11:29] 2025-06-06 04:11:07,907 | INFO     | log transfer has been attempted: DONE
[2025-06-06 04:11:29] 2025-06-06 04:11:07,907 | INFO     | job 6678314011 has finished - writing final server update
[2025-06-06 04:11:29] 2025-06-06 04:11:07,908 | INFO     | total number of processed events: 400 (read)
[2025-06-06 04:11:29] 2025-06-06 04:11:07,910 | INFO     | executing command: lscpu
[2025-06-06 04:11:29] 2025-06-06 04:11:07,966 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 04:11:29] 2025-06-06 04:11:08,544 | INFO     | monitor loop #421: job 0:6678314011 is in state 'finished'
[2025-06-06 04:11:29] 2025-06-06 04:11:08,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:11:29] 2025-06-06 04:11:09,607 | INFO     | PID=1724824 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 04:11:29] 2025-06-06 04:11:09,607 | INFO     | .. there are 4 such processes running
[2025-06-06 04:11:29] 2025-06-06 04:11:11,052 | INFO     | monitor loop #422: job 0:6678314011 is in state 'finished'
[2025-06-06 04:11:29] 2025-06-06 04:11:11,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:11:29] 2025-06-06 04:11:13,555 | INFO     | monitor loop #423: job 0:6678314011 is in state 'finished'
[2025-06-06 04:11:29] 2025-06-06 04:11:13,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 04:11:29] 2025-06-06 04:11:14,779 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 04:11:29] 2025-06-06 04:11:14,779 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678314011/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 04:11:29] 2025-06-06 04:11:14,780 | INFO     | extracted standard info from prmon json
[2025-06-06 04:11:29] 2025-06-06 04:11:14,780 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 04:11:29] 2025-06-06 04:11:14,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 04:11:29] 2025-06-06 04:11:14,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 04:11:29] 2025-06-06 04:11:14,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 04:11:29] 2025-06-06 04:11:14,784 | INFO     | fitting pss+swap vs Time
[2025-06-06 04:11:29] 2025-06-06 04:11:14,784 | INFO     | sum of square deviations: 197203697.5
[2025-06-06 04:11:29] 2025-06-06 04:11:14,786 | INFO     | sum of deviations: -5562928580.500002
[2025-06-06 04:11:29] 2025-06-06 04:11:14,786 | INFO     | mean x: 1749180326.5
[2025-06-06 04:11:29] 2025-06-06 04:11:14,786 | INFO     | mean y: 2698172.7790697673
[2025-06-06 04:11:29] 2025-06-06 04:11:14,786 | INFO     | -- intersect: 49345410069.62459
[2025-06-06 04:11:29] 2025-06-06 04:11:14,786 | INFO     | intersect: 49345410069.62459
[2025-06-06 04:11:29] 2025-06-06 04:11:14,787 | INFO     | chi2: 0.014636162507096762
[2025-06-06 04:11:29] 2025-06-06 04:11:14,787 | INFO     | -- intersect: 49345410069.62459
[2025-06-06 04:11:29] 2025-06-06 04:11:14,787 | INFO     | current memory leak: -28.21 B/s (using 86 data points, chi2=0.01)
[2025-06-06 04:11:29] 2025-06-06 04:11:14,787 | INFO     | ..............................
[2025-06-06 04:11:29] 2025-06-06 04:11:14,787 | INFO     | . Timing measurements:
[2025-06-06 04:11:29] 2025-06-06 04:11:14,788 | INFO     | . get job = 0 s
[2025-06-06 04:11:29] 2025-06-06 04:11:14,788 | INFO     | . initial setup = 1 s
[2025-06-06 04:11:29] 2025-06-06 04:11:14,788 | INFO     | . payload setup = 6 s
[2025-06-06 04:11:29] 2025-06-06 04:11:14,788 | INFO     | . stage-in = 0 s
[2025-06-06 04:11:29] 2025-06-06 04:11:14,788 | INFO     | . payload execution = 5635 s
[2025-06-06 04:11:29] 2025-06-06 04:11:14,788 | INFO     | . stage-out = 1 s
[2025-06-06 04:11:29] 2025-06-06 04:11:14,788 | INFO     | . log creation = 0 s
[2025-06-06 04:11:29] 2025-06-06 04:11:14,788 | INFO     | ..............................
[2025-06-06 04:11:29] 2025-06-06 04:11:15,369 | INFO     | 
[2025-06-06 04:11:29] 2025-06-06 04:11:15,369 | INFO     | job summary report
[2025-06-06 04:11:29] 2025-06-06 04:11:15,369 | INFO     | --------------------------------------------------
[2025-06-06 04:11:29] 2025-06-06 04:11:15,369 | INFO     | PanDA job id: 6678314011
[2025-06-06 04:11:29] 2025-06-06 04:11:15,369 | INFO     | task id: 45006595
[2025-06-06 04:11:29] 2025-06-06 04:11:15,370 | INFO     | errors: (none)
[2025-06-06 04:11:29] 2025-06-06 04:11:15,370 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 04:11:29] 2025-06-06 04:11:15,370 | INFO     | pilot state: finished 
[2025-06-06 04:11:29] 2025-06-06 04:11:15,370 | INFO     | transexitcode: 0
[2025-06-06 04:11:29] 2025-06-06 04:11:15,370 | INFO     | exeerrorcode: 0
[2025-06-06 04:11:29] 2025-06-06 04:11:15,370 | INFO     | exeerrordiag: 
[2025-06-06 04:11:29] 2025-06-06 04:11:15,370 | INFO     | exitcode: 0
[2025-06-06 04:11:29] 2025-06-06 04:11:15,370 | INFO     | exitmsg: OK
[2025-06-06 04:11:29] 2025-06-06 04:11:15,370 | INFO     | cpuconsumptiontime: 45976 s
[2025-06-06 04:11:29] 2025-06-06 04:11:15,371 | INFO     | nevents: 400
[2025-06-06 04:11:29] 2025-06-06 04:11:15,371 | INFO     | neventsw: 0
[2025-06-06 04:11:29] 2025-06-06 04:11:15,371 | INFO     | pid: 1731520
[2025-06-06 04:11:29] 2025-06-06 04:11:15,371 | INFO     | pgrp: 1731520
[2025-06-06 04:11:29] 2025-06-06 04:11:15,371 | INFO     | corecount: 12
[2025-06-06 04:11:29] 2025-06-06 04:11:15,371 | INFO     | event service: False
[2025-06-06 04:11:29] 2025-06-06 04:11:15,371 | INFO     | sizes: {0: 2397178, 1: 2397377, 4: 2397583, 11: 2397611, 5645: 2424138, 5647: 2433093, 5649: 2433277, 5656: 2433447}
[2025-06-06 04:11:29] 2025-06-06 04:11:15,371 | INFO     | --------------------------------------------------
[2025-06-06 04:11:29] 2025-06-06 04:11:15,371 | INFO     | 
[2025-06-06 04:11:29] 2025-06-06 04:11:15,372 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 04:11:29] 2025-06-06 04:11:15,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,399 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 04:11:29] 2025-06-06 04:11:15,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,399 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 04:11:29] 2025-06-06 04:11:15,399 | INFO     | job 6678314011 has completed (purged errors)
[2025-06-06 04:11:29] 2025-06-06 04:11:15,400 | INFO     | overall cleanup function is called
[2025-06-06 04:11:29] 2025-06-06 04:11:16,412 | INFO     | --- collectZombieJob: --- 10, [1731520]
[2025-06-06 04:11:29] 2025-06-06 04:11:16,412 | INFO     | zombie collector waiting for pid 1731520
[2025-06-06 04:11:29] 2025-06-06 04:11:16,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 04:11:29] 2025-06-06 04:11:16,412 | INFO     | collected zombie processes
[2025-06-06 04:11:29] 2025-06-06 04:11:16,412 | INFO     | will attempt to kill all subprocesses of pid=1731520
[2025-06-06 04:11:29] 2025-06-06 04:11:16,648 | INFO     | process IDs to be killed: [1731520] (in reverse order)
[2025-06-06 04:11:29] 2025-06-06 04:11:16,724 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 04:11:29] 2025-06-06 04:11:16,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 04:11:29] 2025-06-06 04:11:16,731 | INFO     | did not find any defunct processes belonging to 1731520
[2025-06-06 04:11:29] 2025-06-06 04:11:16,736 | INFO     | did not find any defunct processes belonging to 1731520
[2025-06-06 04:11:29] 2025-06-06 04:11:16,736 | INFO     | ready for new job
[2025-06-06 04:11:29] 2025-06-06 04:11:16,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 04:11:29] 2025-06-06 04:11:16,739 | INFO     | **************************************
[2025-06-06 04:11:29] 2025-06-06 04:11:16,739 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 04:11:29] 2025-06-06 04:11:16,739 | INFO     | **************************************
[2025-06-06 04:11:29] 2025-06-06 04:11:16,739 | INFO     | 
[2025-06-06 04:11:29] 2025-06-06 04:11:16,744 | INFO     | architecture information:
[2025-06-06 04:11:29] 2025-06-06 04:11:16,748 | INFO     | executing command: cat /etc/os-release
[2025-06-06 04:11:29] 2025-06-06 04:11:16,762 | INFO     | cat /etc/os-release:
[2025-06-06 04:11:29] NAME="CentOS Linux"
[2025-06-06 04:11:29] VERSION="7 (Core)"
[2025-06-06 04:11:29] ID="centos"
[2025-06-06 04:11:29] ID_LIKE="rhel fedora"
[2025-06-06 04:11:29] VERSION_ID="7"
[2025-06-06 04:11:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 04:11:29] ANSI_COLOR="0;31"
[2025-06-06 04:11:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 04:11:29] HOME_URL="https://www.centos.org/"
[2025-06-06 04:11:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 04:11:29] 
[2025-06-06 04:11:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 04:11:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 04:11:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 04:11:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 04:11:29] 
[2025-06-06 04:11:29] 2025-06-06 04:11:16,763 | INFO     | **************************************
[2025-06-06 04:11:29] 2025-06-06 04:11:17,265 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 04:11:29] 2025-06-06 04:11:17,288 | INFO     | sufficient remaining disk space (92313485312 B)
[2025-06-06 04:11:29] 2025-06-06 04:11:17,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 04:11:29] 2025-06-06 04:11:17,289 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 04:11:29] 2025-06-06 04:11:17,289 | INFO     | update_server=False
[2025-06-06 04:11:29] 2025-06-06 04:11:17,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 04:11:29] 2025-06-06 04:11:17,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 04:11:29] 2025-06-06 04:11:17,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:11:29] 2025-06-06 04:11:17,290 | INFO     | aborting loop
[2025-06-06 04:11:29] 2025-06-06 04:11:17,602 | INFO     | all job control threads have been joined
[2025-06-06 04:11:29] 2025-06-06 04:11:17,627 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 04:11:29] 2025-06-06 04:11:17,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 04:11:29] 2025-06-06 04:11:17,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 04:11:29] 2025-06-06 04:11:18,203 | INFO     | all data control threads have been joined
[2025-06-06 04:11:29] 2025-06-06 04:11:18,294 | INFO     | [job] retrieve thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:18,295 | INFO     | [job] job monitor thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:18,333 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:18,343 | INFO     | [payload] validate_post thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:18,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 04:11:29] 2025-06-06 04:11:18,453 | INFO     | all payload control threads have been joined
[2025-06-06 04:11:29] 2025-06-06 04:11:18,563 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:18,607 | INFO     | [job] control thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:18,916 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:18,991 | INFO     | [payload] failed_post thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:19,191 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:19,208 | INFO     | [data] control thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:19,295 | INFO     | [data] copytool_out thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:19,361 | INFO     | [data] copytool_in thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:19,458 | INFO     | [payload] control thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:19,734 | INFO     | [job] validate thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:19,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 04:11:29] 2025-06-06 04:11:20,959 | INFO     | [job] queue monitor thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:22,429 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 04:11:29] 2025-06-06 04:11:24,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132779989026624)>', '<ExcThread(monitor, started 132779299821312)>']
[2025-06-06 04:11:29] 2025-06-06 04:11:24,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 04:11:29] 2025-06-06 04:11:24,662 | INFO     | [monitor] control thread has ended
[2025-06-06 04:11:29] 2025-06-06 04:11:29,427 | INFO     | all workflow threads have been joined
[2025-06-06 04:11:29] 2025-06-06 04:11:29,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 04:11:29] 2025-06-06 04:11:29,427 | INFO     | traces error code: 0
[2025-06-06 04:11:29] 2025-06-06 04:11:29,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 04:11:29] 2025-06-06 04:11:29,564 [wrapper] ==== pilot stdout END ====
[2025-06-06 04:11:29] 2025-06-06 04:11:29,570 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 04:11:29] 2025-06-06 04:11:29,574 [wrapper] pilotpid: 1724824
[2025-06-06 04:11:29] 2025-06-06 04:11:29,577 [wrapper] Pilot exit status: 0
[2025-06-06 04:11:29] 2025-06-06 04:11:29,592 [wrapper] pandaids: 6678314011
[2025-06-06 04:11:29] 2025-06-06 04:11:29,662 [wrapper] cleanup supervisor_pilot 1816624 1724825
[2025-06-06 04:11:29] 2025-06-06 04:11:29,665 [wrapper] Test setup, not cleaning
[2025-06-06 04:11:29] 2025-06-06 04:11:29,669 [wrapper] apfmon messages muted
[2025-06-06 04:11:29] 2025-06-06 04:11:29,675 [wrapper] ==== wrapper stdout END ====
[2025-06-06 04:11:29] 2025-06-06 04:11:29,681 [wrapper] ==== wrapper stderr END ====
[2025-06-06 04:11:29]  *** Error codes and diagnostics ***
[2025-06-06 04:11:29]     "exeErrorCode": 0,
[2025-06-06 04:11:29]     "exeErrorDiag": "",
[2025-06-06 04:11:29]     "pilotErrorCode": 0,
[2025-06-06 04:11:29]     "pilotErrorDiag": "",
[2025-06-06 04:11:29]  *** Listing of results directory ***
[2025-06-06 04:11:29] total 388088
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-06 04:11:29] -rwx------ 1 boinc boinc     37140 Jun  4 05:06 runpilot2-wrapper.sh
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:06 queuedata.json
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc       100 Jun  6 02:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 04:11:29] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 02:36 run_atlas
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc       105 Jun  6 02:36 job.xml
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc      6556 Jun  6 02:36 init_data.xml
[2025-06-06 04:11:29] -rw-r--r-- 2 boinc boinc 214506365 Jun  6 02:36 EVNT.45006593._002118.pool.root.1
[2025-06-06 04:11:29] -rw-r--r-- 2 boinc boinc     15093 Jun  6 02:36 start_atlas.sh
[2025-06-06 04:11:29] drwxrwx--x 2 boinc boinc      4096 Jun  6 02:36 shared
[2025-06-06 04:11:29] -rw-r--r-- 2 boinc boinc    508880 Jun  6 02:36 input.tar.gz
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc         0 Jun  6 02:36 boinc_lockfile
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc      2525 Jun  6 02:36 pandaJob.out
[2025-06-06 04:11:29] -rw------- 1 boinc boinc    987721 Jun  6 02:36 agis_schedconf.cvmfs.json
[2025-06-06 04:11:29] -rw------- 1 boinc boinc   1598969 Jun  6 02:36 agis_ddmendpoints.agis.ALL.json
[2025-06-06 04:11:29] drwx------ 4 boinc boinc      4096 Jun  6 02:36 pilot3
[2025-06-06 04:11:29] -rw------- 1 boinc boinc        95 Jun  6 04:10 pilot_heartbeat.json
[2025-06-06 04:11:29] -rw------- 1 boinc boinc 177191751 Jun  6 04:10 HITS.45006595._052896.pool.root.1
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc       529 Jun  6 04:10 boinc_task_state.xml
[2025-06-06 04:11:29] -rw------- 1 boinc boinc      1024 Jun  6 04:11 memory_monitor_summary.json
[2025-06-06 04:11:29] -rw------- 1 boinc boinc    379361 Jun  6 04:11 log.45006595._052896.job.log.tgz.1
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc      8192 Jun  6 04:11 boinc_mmap_file
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc        27 Jun  6 04:11 wrapper_checkpoint.txt
[2025-06-06 04:11:29] -rw------- 1 boinc boinc      7669 Jun  6 04:11 heartbeat.json
[2025-06-06 04:11:29] -rw------- 1 boinc boinc      4360 Jun  6 04:11 pilotlog.txt
[2025-06-06 04:11:29] -rw------- 1 boinc boinc    555148 Jun  6 04:11 log.45006595._052896.job.log.1
[2025-06-06 04:11:29] -rw------- 1 boinc boinc       357 Jun  6 04:11 output.list
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc       620 Jun  6 04:11 runtime_log
[2025-06-06 04:11:29] -rw------- 1 boinc boinc    952320 Jun  6 04:11 result.tar.gz
[2025-06-06 04:11:29] -rw------- 1 boinc boinc       647 Jun  6 04:11 uw9MDmzVvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnjaKDmCJv58m.diag
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc      8726 Jun  6 04:11 runtime_log.err
[2025-06-06 04:11:29] -rw-r--r-- 1 boinc boinc     21456 Jun  6 04:11 stderr.txt
[2025-06-06 04:11:29] HITS file was successfully produced:
[2025-06-06 04:11:29] -rw------- 1 boinc boinc 177191751 Jun  6 04:10 shared/HITS.pool.root.1
[2025-06-06 04:11:29]  *** Contents of shared directory: ***
[2025-06-06 04:11:29] total 383976
[2025-06-06 04:11:29] -rw-r--r-- 2 boinc boinc 214506365 Jun  6 02:36 ATLAS.root_0
[2025-06-06 04:11:29] -rw-r--r-- 2 boinc boinc     15093 Jun  6 02:36 start_atlas.sh
[2025-06-06 04:11:29] -rw-r--r-- 2 boinc boinc    508880 Jun  6 02:36 input.tar.gz
[2025-06-06 04:11:29] -rw------- 1 boinc boinc 177191751 Jun  6 04:10 HITS.pool.root.1
[2025-06-06 04:11:29] -rw------- 1 boinc boinc    952320 Jun  6 04:11 result.tar.gz
04:11:31 (1721077): run_atlas exited; CPU time 46036.645659
04:11:31 (1721077): called boinc_finish(0)

</stderr_txt>
]]>

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