Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:56:48 (829926): wrapper (7.7.26015): starting
06:56:48 (829926): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 06:56:48] Arguments: --nthreads 12
[2025-06-04 06:56:48] Threads: 12
[2025-06-04 06:56:48] Checking for CVMFS
[2025-06-04 06:56:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:56:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:56:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:56:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:56:49] 2.12.6.0 1448327 23179 394088 146777 0 200 38490417 40960000 5016 16776704 0 111853130 99.742 82060622 34438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:56:49] CVMFS is ok
[2025-06-04 06:56:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:56:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:56:49] Further information can be found at the LHC@home message board.
[2025-06-04 06:56:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:56:49] Checking for apptainer binary...
[2025-06-04 06:56:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:56:49] Running /usr/bin/apptainer --version
[2025-06-04 06:56:49] apptainer version 1.4.1-1.el9
[2025-06-04 06:56:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:56:49] c6-5-37-3.aglt2.org
[2025-06-04 06:56:49] apptainer works
[2025-06-04 06:56:49] Set ATHENA_PROC_NUMBER=12
[2025-06-04 06:56:49] Set ATHENA_CORE_NUMBER=12
[2025-06-04 06:56:49] Starting ATLAS job with PandaID=6678362568
[2025-06-04 06:56:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:38:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:38:28]  is_altstaged=None
[2025-06-04 07:38:28]  is_tar=False
[2025-06-04 07:38:28]  lfn=log.45006595._053063.job.log.tgz.1
[2025-06-04 07:38:28]  mtime=0
[2025-06-04 07:38:28]  protocol_id=None
[2025-06-04 07:38:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:38:28]  replicas=None
[2025-06-04 07:38:28]  scope=mc23_13p6TeV
[2025-06-04 07:38:28]  status=None
[2025-06-04 07:38:28]  status_code=0
[2025-06-04 07:38:28]  storage_token=
[2025-06-04 07:38:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678362568/log.45006595._053063.job.log.tgz.1
[2025-06-04 07:38:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/94/log.45006595._053063.job.log.tgz.1
[2025-06-04 07:38:28]  workdir=None
[2025-06-04 07:38:28] ]
[2025-06-04 07:38:28] 2025-06-04 11:38:03,441 | INFO     | transferring file log.45006595._053063.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678362568/log.45006595._053063.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:38:28] 2025-06-04 11:38:03,441 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678362568/log.45006595._053063.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._053063.job
[2025-06-04 07:38:28] 2025-06-04 11:38:03,454 | INFO     | adding to output.list: log.45006595._053063.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/94/log.45006595._053063.job.log.tg
[2025-06-04 07:38:28] 2025-06-04 11:38:03,455 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:38:28] 2025-06-04 11:38:03,455 | INFO     | summary of transferred files:
[2025-06-04 07:38:28] 2025-06-04 11:38:03,455 | INFO     |  -- lfn=log.45006595._053063.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:38:28] 2025-06-04 11:38:03,455 | INFO     | stage-out finished correctly
[2025-06-04 07:38:28] 2025-06-04 11:38:03,566 | INFO     | monitor loop #189: job 0:6678362568 is in state 'finished'
[2025-06-04 07:38:28] 2025-06-04 11:38:03,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:38:28] 2025-06-04 11:38:06,070 | INFO     | monitor loop #190: job 0:6678362568 is in state 'finished'
[2025-06-04 07:38:28] 2025-06-04 11:38:06,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:38:28] 2025-06-04 11:38:06,446 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:38:28] 2025-06-04 11:38:06,536 | INFO     | job 6678362568 has state=finished
[2025-06-04 07:38:28] 2025-06-04 11:38:06,536 | INFO     | preparing for final server update for job 6678362568 in state='finished'
[2025-06-04 07:38:28] 2025-06-04 11:38:06,536 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:38:28] 2025-06-04 11:38:06,536 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:38:28] 2025-06-04 11:38:06,536 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:38:28] 2025-06-04 11:38:06,537 | INFO     | job 6678362568 has finished - writing final server update
[2025-06-04 07:38:28] 2025-06-04 11:38:06,537 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:38:28] 2025-06-04 11:38:06,550 | INFO     | executing command: lscpu
[2025-06-04 07:38:28] 2025-06-04 11:38:06,596 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:38:28] 2025-06-04 11:38:08,573 | INFO     | monitor loop #191: job 0:6678362568 is in state 'finished'
[2025-06-04 07:38:28] 2025-06-04 11:38:08,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:38:28] 2025-06-04 11:38:09,042 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 07:38:28] 2025-06-04 11:38:09,043 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678362568/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:38:28] 2025-06-04 11:38:09,043 | INFO     | extracted standard info from prmon json
[2025-06-04 07:38:28] 2025-06-04 11:38:09,043 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:38:28] 2025-06-04 11:38:09,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:38:28] 2025-06-04 11:38:09,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:38:28] 2025-06-04 11:38:09,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | sum of square deviations: 12176972.5
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | sum of deviations: 2423354198.0000005
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | mean x: 1749035949.5
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | mean y: 2338482.1764705884
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | -- intersect: -348075446096.35834
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | intersect: -348075446096.35834
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | chi2: 0.3995829595640975
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | -- intersect: -348075446096.35834
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | current memory leak: 199.01 B/s (using 34 data points, chi2=0.40)
[2025-06-04 07:38:28] 2025-06-04 11:38:09,045 | INFO     | ..............................
[2025-06-04 07:38:28] 2025-06-04 11:38:09,046 | INFO     | . Timing measurements:
[2025-06-04 07:38:28] 2025-06-04 11:38:09,046 | INFO     | . get job = 0 s
[2025-06-04 07:38:28] 2025-06-04 11:38:09,046 | INFO     | . initial setup = 2 s
[2025-06-04 07:38:28] 2025-06-04 11:38:09,046 | INFO     | . payload setup = 4 s
[2025-06-04 07:38:28] 2025-06-04 11:38:09,046 | INFO     | . stage-in = 0 s
[2025-06-04 07:38:28] 2025-06-04 11:38:09,046 | INFO     | . payload execution = 2444 s
[2025-06-04 07:38:28] 2025-06-04 11:38:09,046 | INFO     | . stage-out = 0 s
[2025-06-04 07:38:28] 2025-06-04 11:38:09,046 | INFO     | . log creation = 0 s
[2025-06-04 07:38:28] 2025-06-04 11:38:09,046 | INFO     | ..............................
[2025-06-04 07:38:28] 2025-06-04 11:38:09,092 | INFO     | 
[2025-06-04 07:38:28] 2025-06-04 11:38:09,092 | INFO     | job summary report
[2025-06-04 07:38:28] 2025-06-04 11:38:09,092 | INFO     | --------------------------------------------------
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | PanDA job id: 6678362568
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | task id: 45006595
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | errors: (none)
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | pilot state: finished 
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | transexitcode: 0
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | exeerrorcode: 0
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | exeerrordiag: 
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | exitcode: 0
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | exitmsg: OK
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | cpuconsumptiontime: 22126 s
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | nevents: 400
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | neventsw: 0
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | pid: 840653
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | pgrp: 840653
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | corecount: 12
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | event service: False
[2025-06-04 07:38:28] 2025-06-04 11:38:09,093 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 2452: 2430509, 2453: 2439450, 2456: 2439506, 2459: 2439804}
[2025-06-04 07:38:28] 2025-06-04 11:38:09,094 | INFO     | --------------------------------------------------
[2025-06-04 07:38:28] 2025-06-04 11:38:09,094 | INFO     | 
[2025-06-04 07:38:28] 2025-06-04 11:38:09,094 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:38:28] 2025-06-04 11:38:09,108 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,109 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:38:28] 2025-06-04 11:38:09,110 | INFO     | job 6678362568 has completed (purged errors)
[2025-06-04 07:38:28] 2025-06-04 11:38:09,110 | INFO     | overall cleanup function is called
[2025-06-04 07:38:28] 2025-06-04 11:38:10,116 | INFO     | --- collectZombieJob: --- 10, [840653]
[2025-06-04 07:38:28] 2025-06-04 11:38:10,117 | INFO     | zombie collector waiting for pid 840653
[2025-06-04 07:38:28] 2025-06-04 11:38:10,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:38:28] 2025-06-04 11:38:10,117 | INFO     | collected zombie processes
[2025-06-04 07:38:28] 2025-06-04 11:38:10,117 | INFO     | will attempt to kill all subprocesses of pid=840653
[2025-06-04 07:38:28] 2025-06-04 11:38:10,247 | INFO     | process IDs to be killed: [840653] (in reverse order)
[2025-06-04 07:38:28] 2025-06-04 11:38:10,297 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:38:28] 2025-06-04 11:38:10,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:38:28] 2025-06-04 11:38:10,303 | INFO     | did not find any defunct processes belonging to 840653
[2025-06-04 07:38:28] 2025-06-04 11:38:10,308 | INFO     | did not find any defunct processes belonging to 840653
[2025-06-04 07:38:28] 2025-06-04 11:38:10,309 | INFO     | ready for new job
[2025-06-04 07:38:28] 2025-06-04 11:38:10,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:38:28] 2025-06-04 11:38:10,310 | INFO     | **************************************
[2025-06-04 07:38:28] 2025-06-04 11:38:10,310 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:38:28] 2025-06-04 11:38:10,310 | INFO     | **************************************
[2025-06-04 07:38:28] 2025-06-04 11:38:10,310 | INFO     | 
[2025-06-04 07:38:28] 2025-06-04 11:38:10,324 | INFO     | architecture information:
[2025-06-04 07:38:28] 2025-06-04 11:38:10,324 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:38:28] 2025-06-04 11:38:10,334 | INFO     | cat /etc/os-release:
[2025-06-04 07:38:28] NAME="CentOS Linux"
[2025-06-04 07:38:28] VERSION="7 (Core)"
[2025-06-04 07:38:28] ID="centos"
[2025-06-04 07:38:28] ID_LIKE="rhel fedora"
[2025-06-04 07:38:28] VERSION_ID="7"
[2025-06-04 07:38:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:38:28] ANSI_COLOR="0;31"
[2025-06-04 07:38:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:38:28] HOME_URL="https://www.centos.org/"
[2025-06-04 07:38:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:38:28] 
[2025-06-04 07:38:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:38:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:38:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:38:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:38:28] 
[2025-06-04 07:38:28] 2025-06-04 11:38:10,334 | INFO     | **************************************
[2025-06-04 07:38:28] 2025-06-04 11:38:10,837 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:38:28] 2025-06-04 11:38:10,848 | INFO     | sufficient remaining disk space (75339137024 B)
[2025-06-04 07:38:28] 2025-06-04 11:38:10,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:38:28] 2025-06-04 11:38:10,849 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:38:28] 2025-06-04 11:38:10,849 | INFO     | update_server=False
[2025-06-04 07:38:28] 2025-06-04 11:38:10,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:38:28] 2025-06-04 11:38:10,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:38:28] 2025-06-04 11:38:11,077 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:38:28] 2025-06-04 11:38:11,078 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:38:28] 2025-06-04 11:38:11,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:38:28] 2025-06-04 11:38:11,078 | INFO     | will abort loop
[2025-06-04 07:38:28] 2025-06-04 11:38:11,201 | INFO     | all job control threads have been joined
[2025-06-04 07:38:28] 2025-06-04 11:38:11,256 | INFO     | all data control threads have been joined
[2025-06-04 07:38:28] 2025-06-04 11:38:11,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:38:28] 2025-06-04 11:38:11,803 | INFO     | all payload control threads have been joined
[2025-06-04 07:38:28] 2025-06-04 11:38:11,814 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:38:28] 2025-06-04 11:38:11,815 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:38:28] 2025-06-04 11:38:11,815 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:38:28] 2025-06-04 11:38:11,853 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:11,854 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:12,083 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:12,118 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:12,207 | INFO     | [job] control thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:12,260 | INFO     | [data] control thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:12,480 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:12,487 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:12,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:38:28] 2025-06-04 11:38:12,726 | INFO     | [job] validate thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:12,809 | INFO     | [payload] control thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:12,880 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:12,972 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:13,123 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:13,522 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:16,548 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:21,506 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:38:28] 2025-06-04 11:38:22,511 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:38:28] 2025-06-04 11:38:23,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732662159168)>', '<ExcThread(monitor, started 139732172392192)>']
[2025-06-04 07:38:28] 2025-06-04 11:38:23,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:38:28] 2025-06-04 11:38:23,868 | INFO     | [monitor] control thread has ended
[2025-06-04 07:38:28] 2025-06-04 11:38:28,466 | INFO     | all workflow threads have been joined
[2025-06-04 07:38:28] 2025-06-04 11:38:28,466 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:38:28] 2025-06-04 11:38:28,466 | INFO     | traces error code: 0
[2025-06-04 07:38:28] 2025-06-04 11:38:28,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:38:28] 2025-06-04 11:38:28,601 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:38:28] 2025-06-04 11:38:28,603 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:38:28] 2025-06-04 11:38:28,605 [wrapper] pilotpid: 833934
[2025-06-04 07:38:28] 2025-06-04 11:38:28,607 [wrapper] Pilot exit status: 0
[2025-06-04 07:38:28] 2025-06-04 11:38:28,614 [wrapper] pandaids: 6678362568
[2025-06-04 07:38:28] 2025-06-04 11:38:28,649 [wrapper] cleanup supervisor_pilot  891287 833935
[2025-06-04 07:38:28] 2025-06-04 11:38:28,651 [wrapper] Test setup, not cleaning
[2025-06-04 07:38:28] 2025-06-04 11:38:28,653 [wrapper] apfmon messages muted
[2025-06-04 07:38:28] 2025-06-04 11:38:28,655 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:38:28] 2025-06-04 11:38:28,656 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:38:28]  *** Error codes and diagnostics ***
[2025-06-04 07:38:28]     "exeErrorCode": 0,
[2025-06-04 07:38:28]     "exeErrorDiag": "",
[2025-06-04 07:38:28]     "pilotErrorCode": 0,
[2025-06-04 07:38:28]     "pilotErrorDiag": "",
[2025-06-04 07:38:28]  *** Listing of results directory ***
[2025-06-04 07:38:28] total 390308
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:13 queuedata.json
[2025-06-04 07:38:28] -rwx------. 1 boincer umatlas     37140 Jun  4 01:14 runpilot2-wrapper.sh
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:38:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:56 run_atlas
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:56 job.xml
[2025-06-04 07:38:28] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 06:56 input.tar.gz
[2025-06-04 07:38:28] -rw-r--r--. 2 boincer umatlas 214408981 Jun  4 06:56 EVNT.45006593._002124.pool.root.1
[2025-06-04 07:38:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:56 start_atlas.sh
[2025-06-04 07:38:28] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:56 shared
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:56 boinc_lockfile
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 06:56 pandaJob.out
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas    986812 Jun  4 06:56 agis_schedconf.cvmfs.json
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:38:28] drwx------. 4 boincer umatlas      4096 Jun  4 06:56 pilot3
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 07:29 init_data.xml
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas        95 Jun  4 07:37 pilot_heartbeat.json
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas 180244000 Jun  4 07:37 HITS.45006595._053063.pool.root.1
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:37 boinc_task_state.xml
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas      1026 Jun  4 07:37 memory_monitor_summary.json
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas    330149 Jun  4 07:38 log.45006595._053063.job.log.tgz.1
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:38 boinc_mmap_file
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:38 wrapper_checkpoint.txt
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas      7705 Jun  4 07:38 heartbeat.json
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas      4611 Jun  4 07:38 pilotlog.txt
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas    269810 Jun  4 07:38 log.45006595._053063.job.log.1
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas       357 Jun  4 07:38 output.list
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:38 runtime_log
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas    614400 Jun  4 07:38 result.tar.gz
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 07:38 runtime_log.err
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas       650 Jun  4 07:38 iqpLDmedvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsKnKDm1tAeWn.diag
[2025-06-04 07:38:28] -rw-r--r--. 1 boincer umatlas     21374 Jun  4 07:38 stderr.txt
[2025-06-04 07:38:28] HITS file was successfully produced:
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas 180244000 Jun  4 07:37 shared/HITS.pool.root.1
[2025-06-04 07:38:28]  *** Contents of shared directory: ***
[2025-06-04 07:38:28] total 386524
[2025-06-04 07:38:28] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 06:56 input.tar.gz
[2025-06-04 07:38:28] -rw-r--r--. 2 boincer umatlas 214408981 Jun  4 06:56 ATLAS.root_0
[2025-06-04 07:38:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:56 start_atlas.sh
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas 180244000 Jun  4 07:37 HITS.pool.root.1
[2025-06-04 07:38:28] -rw-------. 1 boincer umatlas    614400 Jun  4 07:38 result.tar.gz
07:38:30 (829926): run_atlas exited; CPU time 22159.956982
07:38:30 (829926): called boinc_finish(0)

</stderr_txt>
]]>

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