Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:12:32 (43313): wrapper (7.7.26015): starting
06:12:32 (43313): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:12:32] Arguments: --nthreads 8
[2025-06-04 06:12:32] Threads: 8
[2025-06-04 06:12:32] Checking for CVMFS
[2025-06-04 06:12:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:12:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:12:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:12:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:12:32] 2.11.2.0 20329 92588 327224 146775 0 675 14914725 18432000 6413 130560 0 214171146 98.871 540494232 37813 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:12:32] CVMFS is ok
[2025-06-04 06:12:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:12:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:12:32] Further information can be found at the LHC@home message board.
[2025-06-04 06:12:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:12:32] Checking for apptainer binary...
[2025-06-04 06:12:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:12:32] Running /usr/bin/apptainer --version
[2025-06-04 06:12:32] apptainer version 1.3.2-1.el7
[2025-06-04 06:12:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:12:35] c-211-9.aglt2.org
[2025-06-04 06:12:35] apptainer works
[2025-06-04 06:12:35] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:12:35] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:12:35] Starting ATLAS job with PandaID=6666763208
[2025-06-04 06:12:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:03:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:03:07] 2025-06-04 13:02:43,532 | INFO     | monitor loop #753: job 0:6666763208 is in state 'finished'
[2025-06-04 09:03:07] 2025-06-04 13:02:43,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:03:07] 2025-06-04 13:02:46,060 | INFO     | monitor loop #754: job 0:6666763208 is in state 'finished'
[2025-06-04 09:03:07] 2025-06-04 13:02:46,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:03:07] 2025-06-04 13:02:48,013 | INFO     | PID=47018 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 09:03:07] 2025-06-04 13:02:48,013 | INFO     | .. there are 9 such processes running
[2025-06-04 09:03:07] 2025-06-04 13:02:48,119 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:03:07] 2025-06-04 13:02:48,120 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6666763208/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:03:07] 2025-06-04 13:02:48,120 | INFO     | extracted standard info from prmon json
[2025-06-04 09:03:07] 2025-06-04 13:02:48,120 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:03:07] 2025-06-04 13:02:48,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:03:07] 2025-06-04 13:02:48,121 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:03:07] 2025-06-04 13:02:48,121 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:03:07] 2025-06-04 13:02:48,123 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:03:07] 2025-06-04 13:02:48,123 | INFO     | sum of square deviations: 1418361477.5
[2025-06-04 09:03:07] 2025-06-04 13:02:48,124 | INFO     | sum of deviations: -9197772302.499998
[2025-06-04 09:03:07] 2025-06-04 13:02:48,124 | INFO     | mean x: 1749037064.5
[2025-06-04 09:03:07] 2025-06-04 13:02:48,124 | INFO     | mean y: 2537542.3433734938
[2025-06-04 09:03:07] 2025-06-04 13:02:48,125 | INFO     | -- intersect: 11344670646.70499
[2025-06-04 09:03:07] 2025-06-04 13:02:48,125 | INFO     | intersect: 11344670646.70499
[2025-06-04 09:03:07] 2025-06-04 13:02:48,125 | INFO     | chi2: 1.771259126750395
[2025-06-04 09:03:07] 2025-06-04 13:02:48,125 | INFO     | sum of square deviations: 1294014960.0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,126 | INFO     | sum of deviations: -8435587702.999985
[2025-06-04 09:03:07] 2025-06-04 13:02:48,126 | INFO     | mean x: 1749036912.0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,126 | INFO     | mean y: 2538477.3788819876
[2025-06-04 09:03:07] 2025-06-04 13:02:48,126 | INFO     | -- intersect: 11404380591.29097
[2025-06-04 09:03:07] 2025-06-04 13:02:48,126 | INFO     | intersect: 11404380591.29097
[2025-06-04 09:03:07] 2025-06-04 13:02:48,126 | INFO     | chi2: 1.771115958659659
[2025-06-04 09:03:07] 2025-06-04 13:02:48,127 | INFO     | current chi2=1.771115958659659 (change=0.008082842796619012 %)
[2025-06-04 09:03:07] 2025-06-04 13:02:48,127 | INFO     | right removable region: 160
[2025-06-04 09:03:07] 2025-06-04 13:02:48,127 | INFO     | sum of square deviations: 1294014960.0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,127 | INFO     | sum of deviations: -36700849470.0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,127 | INFO     | mean x: 1749037217.0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,127 | INFO     | mean y: 2570872.1242236025
[2025-06-04 09:03:07] 2025-06-04 13:02:48,128 | INFO     | -- intersect: 49608760601.603645
[2025-06-04 09:03:07] 2025-06-04 13:02:48,128 | INFO     | intersect: 49608760601.603645
[2025-06-04 09:03:07] 2025-06-04 13:02:48,128 | INFO     | chi2: 0.17786569610164887
[2025-06-04 09:03:07] 2025-06-04 13:02:48,128 | INFO     | current chi2=0.17786569610164887 (change=89.95823403727682 %)
[2025-06-04 09:03:07] 2025-06-04 13:02:48,128 | INFO     | sum of square deviations: 1177156955.0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,129 | INFO     | sum of deviations: -36808849725.99999
[2025-06-04 09:03:07] 2025-06-04 13:02:48,129 | INFO     | mean x: 1749037369.5
[2025-06-04 09:03:07] 2025-06-04 13:02:48,129 | INFO     | mean y: 2570941.2564102565
[2025-06-04 09:03:07] 2025-06-04 13:02:48,129 | INFO     | -- intersect: 54693709132.835815
[2025-06-04 09:03:07] 2025-06-04 13:02:48,129 | INFO     | intersect: 54693709132.835815
[2025-06-04 09:03:07] 2025-06-04 13:02:48,129 | INFO     | chi2: 0.15033673386597857
[2025-06-04 09:03:07] 2025-06-04 13:02:48,129 | INFO     | current chi2=0.15033673386597857 (change=15.477387061717465 %)
[2025-06-04 09:03:07] 2025-06-04 13:02:48,129 | INFO     | left removable region: 20
[2025-06-04 09:03:07] 2025-06-04 13:02:48,129 | INFO     | sum of square deviations: 850825255.0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,130 | INFO     | sum of deviations: -27290248624.999996
[2025-06-04 09:03:07] 2025-06-04 13:02:48,130 | INFO     | mean x: 1749037491.5
[2025-06-04 09:03:07] 2025-06-04 13:02:48,130 | INFO     | mean y: 2561425.942857143
[2025-06-04 09:03:07] 2025-06-04 13:02:48,130 | INFO     | -- intersect: 56102997698.81927
[2025-06-04 09:03:07] 2025-06-04 13:02:48,130 | INFO     | intersect: 56102997698.81927
[2025-06-04 09:03:07] 2025-06-04 13:02:48,130 | INFO     | chi2: 0.1421694646509069
[2025-06-04 09:03:07] 2025-06-04 13:02:48,130 | INFO     | -- intersect: 56102997698.81927
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | current memory leak: -32.08 B/s (using 140 data points, chi2=0.14)
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | ..............................
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | . Timing measurements:
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | . get job = 0 s
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | . initial setup = 3 s
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | . payload setup = 15 s
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | . stage-in = 0 s
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | . payload execution = 10123 s
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | . stage-out = 1 s
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | . log creation = 0 s
[2025-06-04 09:03:07] 2025-06-04 13:02:48,131 | INFO     | ..............................
[2025-06-04 09:03:07] 2025-06-04 13:02:48,232 | INFO     | 
[2025-06-04 09:03:07] 2025-06-04 13:02:48,232 | INFO     | job summary report
[2025-06-04 09:03:07] 2025-06-04 13:02:48,233 | INFO     | --------------------------------------------------
[2025-06-04 09:03:07] 2025-06-04 13:02:48,233 | INFO     | PanDA job id: 6666763208
[2025-06-04 09:03:07] 2025-06-04 13:02:48,233 | INFO     | task id: 44871837
[2025-06-04 09:03:07] 2025-06-04 13:02:48,233 | INFO     | errors: (none)
[2025-06-04 09:03:07] 2025-06-04 13:02:48,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:03:07] 2025-06-04 13:02:48,233 | INFO     | pilot state: finished 
[2025-06-04 09:03:07] 2025-06-04 13:02:48,233 | INFO     | transexitcode: 0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,233 | INFO     | exeerrorcode: 0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,234 | INFO     | exeerrordiag: 
[2025-06-04 09:03:07] 2025-06-04 13:02:48,234 | INFO     | exitcode: 0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,234 | INFO     | exitmsg: OK
[2025-06-04 09:03:07] 2025-06-04 13:02:48,234 | INFO     | cpuconsumptiontime: 66631 s
[2025-06-04 09:03:07] 2025-06-04 13:02:48,234 | INFO     | nevents: 400
[2025-06-04 09:03:07] 2025-06-04 13:02:48,234 | INFO     | neventsw: 0
[2025-06-04 09:03:07] 2025-06-04 13:02:48,234 | INFO     | pid: 6372
[2025-06-04 09:03:07] 2025-06-04 13:02:48,234 | INFO     | pgrp: 6372
[2025-06-04 09:03:07] 2025-06-04 13:02:48,234 | INFO     | corecount: 8
[2025-06-04 09:03:07] 2025-06-04 13:02:48,235 | INFO     | event service: False
[2025-06-04 09:03:07] 2025-06-04 13:02:48,235 | INFO     | sizes: {0: 2405063, 1: 2405262, 9: 2405468, 12: 2405496, 10143: 2433887, 10144: 2443012, 10162: 2443126}
[2025-06-04 09:03:07] 2025-06-04 13:02:48,235 | INFO     | --------------------------------------------------
[2025-06-04 09:03:07] 2025-06-04 13:02:48,235 | INFO     | 
[2025-06-04 09:03:07] 2025-06-04 13:02:48,235 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 09:03:07] 2025-06-04 13:02:48,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,277 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,277 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,277 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,278 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:03:07] 2025-06-04 13:02:48,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:03:07] 2025-06-04 13:02:48,279 | INFO     | job 6666763208 has completed (purged errors)
[2025-06-04 09:03:07] 2025-06-04 13:02:48,279 | INFO     | overall cleanup function is called
[2025-06-04 09:03:07] 2025-06-04 13:02:49,287 | INFO     | --- collectZombieJob: --- 10, [6372]
[2025-06-04 09:03:07] 2025-06-04 13:02:49,288 | INFO     | zombie collector waiting for pid 6372
[2025-06-04 09:03:07] 2025-06-04 13:02:49,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:03:07] 2025-06-04 13:02:49,288 | INFO     | collected zombie processes
[2025-06-04 09:03:07] 2025-06-04 13:02:49,288 | INFO     | will attempt to kill all subprocesses of pid=6372
[2025-06-04 09:03:07] 2025-06-04 13:02:49,520 | INFO     | process IDs to be killed: [6372] (in reverse order)
[2025-06-04 09:03:07] 2025-06-04 13:02:49,731 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:03:07] 2025-06-04 13:02:49,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:03:07] 2025-06-04 13:02:49,738 | INFO     | did not find any defunct processes belonging to 6372
[2025-06-04 09:03:07] 2025-06-04 13:02:49,744 | INFO     | did not find any defunct processes belonging to 6372
[2025-06-04 09:03:07] 2025-06-04 13:02:49,744 | INFO     | ready for new job
[2025-06-04 09:03:07] 2025-06-04 13:02:49,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:03:07] 2025-06-04 13:02:49,746 | INFO     | **************************************
[2025-06-04 09:03:07] 2025-06-04 13:02:49,746 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:03:07] 2025-06-04 13:02:49,747 | INFO     | **************************************
[2025-06-04 09:03:07] 2025-06-04 13:02:49,747 | INFO     | 
[2025-06-04 09:03:07] 2025-06-04 13:02:49,749 | INFO     | architecture information:
[2025-06-04 09:03:07] 2025-06-04 13:02:49,749 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:03:07] 2025-06-04 13:02:49,766 | INFO     | cat /etc/os-release:
[2025-06-04 09:03:07] NAME="CentOS Linux"
[2025-06-04 09:03:07] VERSION="7 (Core)"
[2025-06-04 09:03:07] ID="centos"
[2025-06-04 09:03:07] ID_LIKE="rhel fedora"
[2025-06-04 09:03:07] VERSION_ID="7"
[2025-06-04 09:03:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:03:07] ANSI_COLOR="0;31"
[2025-06-04 09:03:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:03:07] HOME_URL="https://www.centos.org/"
[2025-06-04 09:03:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:03:07] 
[2025-06-04 09:03:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:03:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:03:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:03:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:03:07] 
[2025-06-04 09:03:07] 2025-06-04 13:02:49,767 | INFO     | **************************************
[2025-06-04 09:03:07] 2025-06-04 13:02:50,270 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 09:03:07] 2025-06-04 13:02:50,408 | INFO     | sufficient remaining disk space (56489934848 B)
[2025-06-04 09:03:07] 2025-06-04 13:02:50,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:03:07] 2025-06-04 13:02:50,409 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:03:07] 2025-06-04 13:02:50,409 | INFO     | update_server=False
[2025-06-04 09:03:07] 2025-06-04 13:02:50,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:03:07] 2025-06-04 13:02:50,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:03:07] 2025-06-04 13:02:50,409 | INFO     | aborting loop
[2025-06-04 09:03:07] 2025-06-04 13:02:50,410 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:03:07] 2025-06-04 13:02:50,410 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:03:07] 2025-06-04 13:02:50,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:03:07] 2025-06-04 13:02:50,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:03:07] 2025-06-04 13:02:50,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:03:07] 2025-06-04 13:02:50,730 | INFO     | all job control threads have been joined
[2025-06-04 09:03:07] 2025-06-04 13:02:51,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:03:07] 2025-06-04 13:02:51,209 | INFO     | all payload control threads have been joined
[2025-06-04 09:03:07] 2025-06-04 13:02:51,285 | INFO     | all data control threads have been joined
[2025-06-04 09:03:07] 2025-06-04 13:02:51,415 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:51,415 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:51,731 | INFO     | [job] control thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:52,038 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:52,216 | INFO     | [payload] control thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:52,258 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:52,291 | INFO     | [data] control thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:52,380 | INFO     | [job] validate thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:52,847 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:52,879 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:52,879 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:52,903 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:53,090 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:53,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:03:07] 2025-06-04 13:02:54,247 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:02:54,418 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:03:00,685 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:03:07] 2025-06-04 13:03:01,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:03:07] 2025-06-04 13:03:02,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140640638654272)>', '<ExcThread(monitor, started 140640331470592)>']
[2025-06-04 09:03:07] 2025-06-04 13:03:02,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:03:07] 2025-06-04 13:03:02,467 | INFO     | [monitor] control thread has ended
[2025-06-04 09:03:07] 2025-06-04 13:03:07,173 | INFO     | all workflow threads have been joined
[2025-06-04 09:03:07] 2025-06-04 13:03:07,174 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:03:07] 2025-06-04 13:03:07,174 | INFO     | traces error code: 0
[2025-06-04 09:03:07] 2025-06-04 13:03:07,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:03:07] 2025-06-04 13:03:07,512 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:03:07] 2025-06-04 13:03:07,515 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:03:07] 2025-06-04 13:03:07,517 [wrapper] pilotpid: 47018
[2025-06-04 09:03:07] 2025-06-04 13:03:07,520 [wrapper] Pilot exit status: 0
[2025-06-04 09:03:07] 2025-06-04 13:03:07,538 [wrapper] pandaids: 6666763208
[2025-06-04 09:03:07] 2025-06-04 13:03:07,597 [wrapper] cleanup supervisor_pilot 11898 47019
[2025-06-04 09:03:07] 2025-06-04 13:03:07,600 [wrapper] Test setup, not cleaning
[2025-06-04 09:03:07] 2025-06-04 13:03:07,603 [wrapper] apfmon messages muted
[2025-06-04 09:03:07] 2025-06-04 13:03:07,606 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:03:07] 2025-06-04 13:03:07,608 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:03:07]  *** Error codes and diagnostics ***
[2025-06-04 09:03:07]     "exeErrorCode": 0,
[2025-06-04 09:03:07]     "exeErrorDiag": "",
[2025-06-04 09:03:07]     "pilotErrorCode": 0,
[2025-06-04 09:03:07]     "pilotErrorDiag": "",
[2025-06-04 09:03:07]  *** Listing of results directory ***
[2025-06-04 09:03:07] total 412920
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas    495897 May 27 00:09 pilot3.tar.gz
[2025-06-04 09:03:07] -rwx------ 1 boincer umatlas     37140 May 27 00:37 runpilot2-wrapper.sh
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas      5111 May 27 00:37 queuedata.json
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:03:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:12 run_atlas
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:12 job.xml
[2025-06-04 09:03:07] -rw-r--r-- 2 boincer umatlas 221325124 Jun  4 06:12 EVNT.44871834._002454.pool.root.1
[2025-06-04 09:03:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:12 start_atlas.sh
[2025-06-04 09:03:07] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:12 shared
[2025-06-04 09:03:07] -rw-r--r-- 2 boincer umatlas    508871 Jun  4 06:12 input.tar.gz
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:12 boinc_lockfile
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 06:12 pandaJob.out
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas    986766 Jun  4 06:13 agis_schedconf.cvmfs.json
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas   1603667 Jun  4 06:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:03:07] drwx------ 4 boincer umatlas      4096 Jun  4 06:13 pilot3
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas 195069069 Jun  4 09:01 HITS.44871837._062199.pool.root.1
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas        95 Jun  4 09:01 pilot_heartbeat.json
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas       530 Jun  4 09:01 boinc_task_state.xml
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas      6131 Jun  4 09:02 init_data.xml
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas      1058 Jun  4 09:02 memory_monitor_summary.json
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas    355535 Jun  4 09:02 log.44871837._062199.job.log.tgz.1
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas      7753 Jun  4 09:02 heartbeat.json
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 09:03 boinc_mmap_file
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas        28 Jun  4 09:03 wrapper_checkpoint.txt
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas      4548 Jun  4 09:03 pilotlog.txt
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas    942532 Jun  4 09:03 log.44871837._062199.job.log.1
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas       357 Jun  4 09:03 output.list
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas       620 Jun  4 09:03 runtime_log
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas   1320960 Jun  4 09:03 result.tar.gz
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas      8655 Jun  4 09:03 runtime_log.err
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas       660 Jun  4 09:03 4tVMDmgF1d7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0JRKDmfed6zn.diag
[2025-06-04 09:03:07] -rw-r--r-- 1 boincer umatlas     21107 Jun  4 09:03 stderr.txt
[2025-06-04 09:03:07] HITS file was successfully produced:
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas 195069069 Jun  4 09:01 shared/HITS.pool.root.1
[2025-06-04 09:03:07]  *** Contents of shared directory: ***
[2025-06-04 09:03:07] total 408452
[2025-06-04 09:03:07] -rw-r--r-- 2 boincer umatlas 221325124 Jun  4 06:12 ATLAS.root_0
[2025-06-04 09:03:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:12 start_atlas.sh
[2025-06-04 09:03:07] -rw-r--r-- 2 boincer umatlas    508871 Jun  4 06:12 input.tar.gz
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas 195069069 Jun  4 09:01 HITS.pool.root.1
[2025-06-04 09:03:07] -rw------- 1 boincer umatlas   1320960 Jun  4 09:03 result.tar.gz
09:03:08 (43313): run_atlas exited; CPU time 66850.073921
09:03:08 (43313): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN