Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
00:35:34 (1914020): wrapper (7.7.26015): starting
00:35:34 (1914020): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 00:35:34] Arguments: --nthreads 12
[2025-06-06 00:35:34] Threads: 12
[2025-06-06 00:35:34] Checking for CVMFS
[2025-06-06 00:35:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 00:35:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 00:35:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 00:35:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 00:35:34] 2.12.7.0 600724 4649 59940 146835 1 56 2204007 4096000 0 130560 0 3652190 99.991 1081215 226 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-06 00:35:34] CVMFS is ok
[2025-06-06 00:35:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:35:34] Checking for apptainer binary...
[2025-06-06 00:35:34] apptainer is not installed, using version from CVMFS
[2025-06-06 00:35:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:35:35] lithium
[2025-06-06 00:35:35] apptainer works
[2025-06-06 00:35:35] Set ATHENA_PROC_NUMBER=12
[2025-06-06 00:35:35] Set ATHENA_CORE_NUMBER=12
[2025-06-06 00:35:35] Starting ATLAS job with PandaID=6678362745
[2025-06-06 00:35:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 02:04:15]  *** The last 200 lines of the pilot log: ***
[2025-06-06 02:04:15] 2025-06-06 00:03:09,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:11,701 | INFO     | monitor loop #397: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:11,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:14,205 | INFO     | monitor loop #398: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:14,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:16,708 | INFO     | monitor loop #399: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:16,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:19,209 | INFO     | monitor loop #400: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:19,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:21,713 | INFO     | monitor loop #401: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:21,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:24,216 | INFO     | monitor loop #402: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:24,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:24,837 | INFO     | PID=1917742 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 02:04:15] 2025-06-06 00:03:26,720 | INFO     | monitor loop #403: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:26,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:29,221 | INFO     | monitor loop #404: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:29,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:31,725 | INFO     | monitor loop #405: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:31,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:34,228 | INFO     | monitor loop #406: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:34,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:36,732 | INFO     | monitor loop #407: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:36,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:39,233 | INFO     | monitor loop #408: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:39,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:41,737 | INFO     | monitor loop #409: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:41,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:44,240 | INFO     | monitor loop #410: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:44,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:46,744 | INFO     | monitor loop #411: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:46,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:47,005 | INFO     | PID=1917742 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 02:04:15] 2025-06-06 00:03:49,245 | INFO     | monitor loop #412: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:49,245 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:51,749 | INFO     | monitor loop #413: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:51,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:54,253 | INFO     | monitor loop #414: job 0:6678362745 is in state 'finished'
[2025-06-06 02:04:15] 2025-06-06 00:03:54,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:04:15] 2025-06-06 00:03:55,269 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 02:04:15] 2025-06-06 00:03:55,270 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678362745/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 02:04:15] 2025-06-06 00:03:55,271 | INFO     | extracted standard info from prmon json
[2025-06-06 02:04:15] 2025-06-06 00:03:55,271 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 02:04:15] 2025-06-06 00:03:55,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 02:04:15] 2025-06-06 00:03:55,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 02:04:15] 2025-06-06 00:03:55,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 02:04:15] 2025-06-06 00:03:55,274 | INFO     | fitting pss+swap vs Time
[2025-06-06 02:04:15] 2025-06-06 00:03:55,274 | INFO     | sum of square deviations: 147126479.5
[2025-06-06 02:04:15] 2025-06-06 00:03:55,275 | INFO     | sum of deviations: -17143138141.500004
[2025-06-06 02:04:15] 2025-06-06 00:03:55,275 | INFO     | mean x: 1749165623.5
[2025-06-06 02:04:15] 2025-06-06 00:03:55,275 | INFO     | mean y: 2861481.5256410255
[2025-06-06 02:04:15] 2025-06-06 00:03:55,275 | INFO     | -- intersect: 203815173296.02457
[2025-06-06 02:04:15] 2025-06-06 00:03:55,275 | INFO     | intersect: 203815173296.02457
[2025-06-06 02:04:15] 2025-06-06 00:03:55,275 | INFO     | chi2: 0.12206747130640863
[2025-06-06 02:04:15] 2025-06-06 00:03:55,275 | INFO     | -- intersect: 203815173296.02457
[2025-06-06 02:04:15] 2025-06-06 00:03:55,276 | INFO     | current memory leak: -116.52 B/s (using 78 data points, chi2=0.12)
[2025-06-06 02:04:15] 2025-06-06 00:03:55,276 | INFO     | ..............................
[2025-06-06 02:04:15] 2025-06-06 00:03:55,276 | INFO     | . Timing measurements:
[2025-06-06 02:04:15] 2025-06-06 00:03:55,276 | INFO     | . get job = 0 s
[2025-06-06 02:04:15] 2025-06-06 00:03:55,276 | INFO     | . initial setup = 1 s
[2025-06-06 02:04:15] 2025-06-06 00:03:55,276 | INFO     | . payload setup = 6 s
[2025-06-06 02:04:15] 2025-06-06 00:03:55,277 | INFO     | . stage-in = 0 s
[2025-06-06 02:04:15] 2025-06-06 00:03:55,277 | INFO     | . payload execution = 5185 s
[2025-06-06 02:04:15] 2025-06-06 00:03:55,277 | INFO     | . stage-out = 0 s
[2025-06-06 02:04:15] 2025-06-06 00:03:55,277 | INFO     | . log creation = 0 s
[2025-06-06 02:04:15] 2025-06-06 00:03:55,277 | INFO     | ..............................
[2025-06-06 02:04:15] 2025-06-06 00:03:55,380 | INFO     | 
[2025-06-06 02:04:15] 2025-06-06 00:03:55,380 | INFO     | job summary report
[2025-06-06 02:04:15] 2025-06-06 00:03:55,380 | INFO     | --------------------------------------------------
[2025-06-06 02:04:15] 2025-06-06 00:03:55,380 | INFO     | PanDA job id: 6678362745
[2025-06-06 02:04:15] 2025-06-06 00:03:55,380 | INFO     | task id: 45006595
[2025-06-06 02:04:15] 2025-06-06 00:03:55,380 | INFO     | errors: (none)
[2025-06-06 02:04:15] 2025-06-06 00:03:55,380 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 02:04:15] 2025-06-06 00:03:55,381 | INFO     | pilot state: finished 
[2025-06-06 02:04:15] 2025-06-06 00:03:55,381 | INFO     | transexitcode: 0
[2025-06-06 02:04:15] 2025-06-06 00:03:55,381 | INFO     | exeerrorcode: 0
[2025-06-06 02:04:15] 2025-06-06 00:03:55,381 | INFO     | exeerrordiag: 
[2025-06-06 02:04:15] 2025-06-06 00:03:55,381 | INFO     | exitcode: 0
[2025-06-06 02:04:15] 2025-06-06 00:03:55,381 | INFO     | exitmsg: OK
[2025-06-06 02:04:15] 2025-06-06 00:03:55,381 | INFO     | cpuconsumptiontime: 57121 s
[2025-06-06 02:04:15] 2025-06-06 00:03:55,381 | INFO     | nevents: 400
[2025-06-06 02:04:15] 2025-06-06 00:03:55,381 | INFO     | neventsw: 0
[2025-06-06 02:04:15] 2025-06-06 00:03:55,382 | INFO     | pid: 1924379
[2025-06-06 02:04:15] 2025-06-06 00:03:55,382 | INFO     | pgrp: 1924379
[2025-06-06 02:04:15] 2025-06-06 00:03:55,382 | INFO     | corecount: 12
[2025-06-06 02:04:15] 2025-06-06 00:03:55,382 | INFO     | event service: False
[2025-06-06 02:04:15] 2025-06-06 00:03:55,382 | INFO     | sizes: {0: 2397349, 3: 2397555, 11: 2397583, 5195: 2423750, 5197: 2432761, 5275: 2432875}
[2025-06-06 02:04:15] 2025-06-06 00:03:55,382 | INFO     | --------------------------------------------------
[2025-06-06 02:04:15] 2025-06-06 00:03:55,382 | INFO     | 
[2025-06-06 02:04:15] 2025-06-06 00:03:55,382 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 02:04:15] 2025-06-06 00:03:55,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,399 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 02:04:15] 2025-06-06 00:03:55,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,399 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 02:04:15] 2025-06-06 00:03:55,400 | INFO     | job 6678362745 has completed (purged errors)
[2025-06-06 02:04:15] 2025-06-06 00:03:55,400 | INFO     | overall cleanup function is called
[2025-06-06 02:04:15] 2025-06-06 00:03:56,405 | INFO     | --- collectZombieJob: --- 10, [1924379]
[2025-06-06 02:04:15] 2025-06-06 00:03:56,406 | INFO     | zombie collector waiting for pid 1924379
[2025-06-06 02:04:15] 2025-06-06 00:03:56,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 02:04:15] 2025-06-06 00:03:56,406 | INFO     | collected zombie processes
[2025-06-06 02:04:15] 2025-06-06 00:03:56,406 | INFO     | will attempt to kill all subprocesses of pid=1924379
[2025-06-06 02:04:15] 2025-06-06 00:03:56,492 | INFO     | process IDs to be killed: [1924379] (in reverse order)
[2025-06-06 02:04:15] 2025-06-06 00:03:56,531 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 02:04:15] 2025-06-06 00:03:56,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 02:04:15] 2025-06-06 00:03:56,534 | INFO     | did not find any defunct processes belonging to 1924379
[2025-06-06 02:04:15] 2025-06-06 00:03:56,537 | INFO     | did not find any defunct processes belonging to 1924379
[2025-06-06 02:04:15] 2025-06-06 00:03:56,537 | INFO     | ready for new job
[2025-06-06 02:04:15] 2025-06-06 00:03:56,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 02:04:15] 2025-06-06 00:03:56,538 | INFO     | **************************************
[2025-06-06 02:04:15] 2025-06-06 00:03:56,539 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 02:04:15] 2025-06-06 00:03:56,539 | INFO     | **************************************
[2025-06-06 02:04:15] 2025-06-06 00:03:56,539 | INFO     | 
[2025-06-06 02:04:15] 2025-06-06 00:03:56,558 | INFO     | architecture information:
[2025-06-06 02:04:15] 2025-06-06 00:03:56,559 | INFO     | executing command: cat /etc/os-release
[2025-06-06 02:04:15] 2025-06-06 00:03:56,569 | INFO     | cat /etc/os-release:
[2025-06-06 02:04:15] NAME="CentOS Linux"
[2025-06-06 02:04:15] VERSION="7 (Core)"
[2025-06-06 02:04:15] ID="centos"
[2025-06-06 02:04:15] ID_LIKE="rhel fedora"
[2025-06-06 02:04:15] VERSION_ID="7"
[2025-06-06 02:04:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 02:04:15] ANSI_COLOR="0;31"
[2025-06-06 02:04:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 02:04:15] HOME_URL="https://www.centos.org/"
[2025-06-06 02:04:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 02:04:15] 
[2025-06-06 02:04:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 02:04:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 02:04:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 02:04:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 02:04:15] 
[2025-06-06 02:04:15] 2025-06-06 00:03:56,569 | INFO     | **************************************
[2025-06-06 02:04:15] 2025-06-06 00:03:57,070 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 02:04:15] 2025-06-06 00:03:57,083 | INFO     | sufficient remaining disk space (36500930560 B)
[2025-06-06 02:04:15] 2025-06-06 00:03:57,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 02:04:15] 2025-06-06 00:03:57,083 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 02:04:15] 2025-06-06 00:03:57,083 | INFO     | update_server=False
[2025-06-06 02:04:15] 2025-06-06 00:03:57,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 02:04:15] 2025-06-06 00:03:57,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:04:15] 2025-06-06 00:03:57,084 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 02:04:15] 2025-06-06 00:03:57,085 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 02:04:15] 2025-06-06 00:03:57,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 02:04:15] 2025-06-06 00:03:57,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 02:04:15] 2025-06-06 00:03:57,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:04:15] 2025-06-06 00:03:57,761 | INFO     | aborting loop
[2025-06-06 02:04:15] 2025-06-06 00:03:57,885 | INFO     | all data control threads have been joined
[2025-06-06 02:04:15] 2025-06-06 00:03:57,973 | INFO     | all job control threads have been joined
[2025-06-06 02:04:15] 2025-06-06 00:03:58,045 | INFO     | all payload control threads have been joined
[2025-06-06 02:04:15] 2025-06-06 00:03:58,085 | INFO     | [job] retrieve thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:58,089 | INFO     | [job] queue monitor thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:58,361 | INFO     | [data] copytool_in thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:58,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 02:04:15] 2025-06-06 00:03:58,545 | INFO     | [job] validate thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:58,613 | INFO     | [payload] validate_post thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:58,685 | INFO     | [payload] failed_post thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:58,762 | INFO     | [job] job monitor thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:58,843 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:58,889 | INFO     | [data] control thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:58,961 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:58,977 | INFO     | [job] control thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:59,049 | INFO     | [payload] control thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:03:59,381 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:04:00,477 | INFO     | [data] copytool_out thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:04:00,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 02:04:15] 2025-06-06 00:04:04,525 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:04:08,097 | INFO     | job.realtimelogging is not enabled
[2025-06-06 02:04:15] 2025-06-06 00:04:09,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 02:04:15] 2025-06-06 00:04:09,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096840656704)>', '<ExcThread(monitor, started 140096128939776)>']
[2025-06-06 02:04:15] 2025-06-06 00:04:10,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 02:04:15] 2025-06-06 00:04:10,137 | INFO     | [monitor] control thread has ended
[2025-06-06 02:04:15] 2025-06-06 00:04:14,925 | INFO     | all workflow threads have been joined
[2025-06-06 02:04:15] 2025-06-06 00:04:14,925 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 02:04:15] 2025-06-06 00:04:14,926 | INFO     | traces error code: 0
[2025-06-06 02:04:15] 2025-06-06 00:04:14,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 02:04:15] 2025-06-06 00:04:15,016 [wrapper] ==== pilot stdout END ====
[2025-06-06 02:04:15] 2025-06-06 00:04:15,018 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 02:04:15] 2025-06-06 00:04:15,020 [wrapper] pilotpid: 1917742
[2025-06-06 02:04:15] 2025-06-06 00:04:15,022 [wrapper] Pilot exit status: 0
[2025-06-06 02:04:15] 2025-06-06 00:04:15,030 [wrapper] pandaids: 6678362745
[2025-06-06 02:04:15] 2025-06-06 00:04:15,052 [wrapper] cleanup supervisor_pilot 1936857 1917743
[2025-06-06 02:04:15] 2025-06-06 00:04:15,054 [wrapper] Test setup, not cleaning
[2025-06-06 02:04:15] 2025-06-06 00:04:15,056 [wrapper] apfmon messages muted
[2025-06-06 02:04:15] 2025-06-06 00:04:15,058 [wrapper] ==== wrapper stdout END ====
[2025-06-06 02:04:15] 2025-06-06 00:04:15,061 [wrapper] ==== wrapper stderr END ====
[2025-06-06 02:04:15]  *** Error codes and diagnostics ***
[2025-06-06 02:04:15]     "exeErrorCode": 0,
[2025-06-06 02:04:15]     "exeErrorDiag": "",
[2025-06-06 02:04:15]     "pilotErrorCode": 0,
[2025-06-06 02:04:15]     "pilotErrorDiag": "",
[2025-06-06 02:04:15]  *** Listing of results directory ***
[2025-06-06 02:04:15] total 392412
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc    495897 Jun  4 06:58 pilot3.tar.gz
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc      5111 Jun  4 07:17 queuedata.json
[2025-06-06 02:04:15] -rwx------ 1 boinc boinc     37140 Jun  4 07:18 runpilot2-wrapper.sh
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc       100 Jun  6 00:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 02:04:15] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 00:35 run_atlas
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc       105 Jun  6 00:35 job.xml
[2025-06-06 02:04:15] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:35 start_atlas.sh
[2025-06-06 02:04:15] drwxrwx--x 2 boinc boinc      4096 Jun  6 00:35 shared
[2025-06-06 02:04:15] -rw-r--r-- 2 boinc boinc    508885 Jun  6 00:35 input.tar.gz
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc      6048 Jun  6 00:35 init_data.xml
[2025-06-06 02:04:15] -rw-r--r-- 2 boinc boinc 215486151 Jun  6 00:35 EVNT.45006593._002131.pool.root.1
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc         0 Jun  6 00:35 boinc_lockfile
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc      2525 Jun  6 00:35 pandaJob.out
[2025-06-06 02:04:15] -rw------- 1 boinc boinc    987721 Jun  6 00:35 agis_schedconf.cvmfs.json
[2025-06-06 02:04:15] -rw------- 1 boinc boinc   1598969 Jun  6 00:35 agis_ddmendpoints.agis.ALL.json
[2025-06-06 02:04:15] drwx------ 4 boinc boinc      4096 Jun  6 00:35 pilot3
[2025-06-06 02:04:15] -rw------- 1 boinc boinc 180787967 Jun  6 02:02 HITS.45006595._053240.pool.root.1
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc       529 Jun  6 02:02 boinc_task_state.xml
[2025-06-06 02:04:15] -rw------- 1 boinc boinc      1064 Jun  6 02:02 memory_monitor_summary.json
[2025-06-06 02:04:15] -rw------- 1 boinc boinc    362226 Jun  6 02:02 log.45006595._053240.job.log.tgz.1
[2025-06-06 02:04:15] -rw------- 1 boinc boinc        95 Jun  6 02:03 pilot_heartbeat.json
[2025-06-06 02:04:15] -rw------- 1 boinc boinc      7741 Jun  6 02:03 heartbeat.json
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc      8192 Jun  6 02:04 boinc_mmap_file
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc        27 Jun  6 02:04 wrapper_checkpoint.txt
[2025-06-06 02:04:15] -rw------- 1 boinc boinc      4555 Jun  6 02:04 pilotlog.txt
[2025-06-06 02:04:15] -rw------- 1 boinc boinc    498067 Jun  6 02:04 log.45006595._053240.job.log.1
[2025-06-06 02:04:15] -rw------- 1 boinc boinc       357 Jun  6 02:04 output.list
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc       620 Jun  6 02:04 runtime_log
[2025-06-06 02:04:15] -rw------- 1 boinc boinc    880640 Jun  6 02:04 result.tar.gz
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc      8716 Jun  6 02:04 runtime_log.err
[2025-06-06 02:04:15] -rw------- 1 boinc boinc       654 Jun  6 02:04 CT6LDmvgvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmblaKDmUPb9Jo.diag
[2025-06-06 02:04:15] -rw-r--r-- 1 boinc boinc     22201 Jun  6 02:04 stderr.txt
[2025-06-06 02:04:15] HITS file was successfully produced:
[2025-06-06 02:04:15] -rw------- 1 boinc boinc 180787967 Jun  6 02:02 shared/HITS.pool.root.1
[2025-06-06 02:04:15]  *** Contents of shared directory: ***
[2025-06-06 02:04:15] total 388372
[2025-06-06 02:04:15] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:35 start_atlas.sh
[2025-06-06 02:04:15] -rw-r--r-- 2 boinc boinc    508885 Jun  6 00:35 input.tar.gz
[2025-06-06 02:04:15] -rw-r--r-- 2 boinc boinc 215486151 Jun  6 00:35 ATLAS.root_0
[2025-06-06 02:04:15] -rw------- 1 boinc boinc 180787967 Jun  6 02:02 HITS.pool.root.1
[2025-06-06 02:04:15] -rw------- 1 boinc boinc    880640 Jun  6 02:04 result.tar.gz
02:04:16 (1914020): run_atlas exited; CPU time 56976.722795
02:04:16 (1914020): called boinc_finish(0)

</stderr_txt>
]]>

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