Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:00:55 (3584180): wrapper (7.7.26015): starting
12:00:55 (3584180): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 12:00:55] Arguments: --nthreads 4
[2025-06-04 12:00:55] Threads: 4
[2025-06-04 12:00:55] Checking for CVMFS
[2025-06-04 12:00:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:00:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:00:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:00:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:00:56] 2.12.7.0 963705 1168 56224 146777 3 187 3459114 4096001 6375 130560 0 7076654 99.998 313637 1551 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-06-04 12:00:56] CVMFS is ok
[2025-06-04 12:00:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:00:56] Checking for apptainer binary...
[2025-06-04 12:00:56] apptainer is not installed, using version from CVMFS
[2025-06-04 12:00:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:00:56] senture-z10pe-l
[2025-06-04 12:00:56] apptainer works
[2025-06-04 12:00:56] Set ATHENA_PROC_NUMBER=4
[2025-06-04 12:00:56] Set ATHENA_CORE_NUMBER=4
[2025-06-04 12:00:56] Starting ATLAS job with PandaID=6678313959
[2025-06-04 12:00:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:28:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:28:39]  is_altstaged=None
[2025-06-04 13:28:39]  is_tar=False
[2025-06-04 13:28:39]  lfn=log.45006595._052844.job.log.tgz.1
[2025-06-04 13:28:39]  mtime=0
[2025-06-04 13:28:39]  protocol_id=None
[2025-06-04 13:28:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:28:39]  replicas=None
[2025-06-04 13:28:39]  scope=mc23_13p6TeV
[2025-06-04 13:28:39]  status=None
[2025-06-04 13:28:39]  status_code=0
[2025-06-04 13:28:39]  storage_token=
[2025-06-04 13:28:39]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6678313959/log.45006595._052844.job.log.tgz.1
[2025-06-04 13:28:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/e5/log.45006595._052844.job.log.tgz.1
[2025-06-04 13:28:39]  workdir=None
[2025-06-04 13:28:39] ]
[2025-06-04 13:28:39] 2025-06-04 12:28:16,999 | INFO     | transferring file log.45006595._052844.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6678313959/log.45006595._052844.job.log.tgz.1 to /var/lib/boinc
[2025-06-04 13:28:39] 2025-06-04 12:28:16,999 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6678313959/log.45006595._052844.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.450065
[2025-06-04 13:28:39] 2025-06-04 12:28:17,019 | INFO     | adding to output.list: log.45006595._052844.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/e5/log.45006595._052844.job.log.tg
[2025-06-04 13:28:39] 2025-06-04 12:28:17,019 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:28:39] 2025-06-04 12:28:17,020 | INFO     | summary of transferred files:
[2025-06-04 13:28:39] 2025-06-04 12:28:17,020 | INFO     |  -- lfn=log.45006595._052844.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:28:39] 2025-06-04 12:28:17,020 | INFO     | stage-out finished correctly
[2025-06-04 13:28:39] 2025-06-04 12:28:18,502 | INFO     | monitor loop #392: job 0:6678313959 is in state 'finished'
[2025-06-04 13:28:39] 2025-06-04 12:28:18,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:28:39] 2025-06-04 12:28:18,999 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:28:39] 2025-06-04 12:28:21,005 | INFO     | monitor loop #393: job 0:6678313959 is in state 'finished'
[2025-06-04 13:28:39] 2025-06-04 12:28:21,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:28:39] 2025-06-04 12:28:21,611 | INFO     | job 6678313959 has state=finished
[2025-06-04 13:28:39] 2025-06-04 12:28:21,612 | INFO     | preparing for final server update for job 6678313959 in state='finished'
[2025-06-04 13:28:39] 2025-06-04 12:28:21,612 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:28:39] 2025-06-04 12:28:21,612 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:28:39] 2025-06-04 12:28:21,612 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:28:39] 2025-06-04 12:28:21,612 | INFO     | job 6678313959 has finished - writing final server update
[2025-06-04 13:28:39] 2025-06-04 12:28:21,613 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:28:39] 2025-06-04 12:28:21,618 | INFO     | executing command: lscpu
[2025-06-04 13:28:39] 2025-06-04 12:28:21,666 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:28:39] 2025-06-04 12:28:23,509 | INFO     | monitor loop #394: job 0:6678313959 is in state 'finished'
[2025-06-04 13:28:39] 2025-06-04 12:28:23,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:28:39] 2025-06-04 12:28:24,382 | INFO     | 5241s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 13:28:39] 2025-06-04 12:28:25,822 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 13:28:39] 2025-06-04 12:28:25,823 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6678313959/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:28:39] 2025-06-04 12:28:25,823 | INFO     | extracted standard info from prmon json
[2025-06-04 13:28:39] 2025-06-04 12:28:25,823 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:28:39] 2025-06-04 12:28:25,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:28:39] 2025-06-04 12:28:25,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:28:39] 2025-06-04 12:28:25,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:28:39] 2025-06-04 12:28:25,826 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:28:39] 2025-06-04 12:28:25,826 | INFO     | sum of square deviations: 152858680.0
[2025-06-04 13:28:39] 2025-06-04 12:28:25,826 | INFO     | sum of deviations: -742921927.9999999
[2025-06-04 13:28:39] 2025-06-04 12:28:25,826 | INFO     | mean x: 1749037573.0
[2025-06-04 13:28:39] 2025-06-04 12:28:25,827 | INFO     | mean y: 2312310.2911392404
[2025-06-04 13:28:39] 2025-06-04 12:28:25,827 | INFO     | -- intersect: 8502963800.135226
[2025-06-04 13:28:39] 2025-06-04 12:28:25,827 | INFO     | intersect: 8502963800.135226
[2025-06-04 13:28:39] 2025-06-04 12:28:25,827 | INFO     | chi2: 0.0045682989056580635
[2025-06-04 13:28:39] 2025-06-04 12:28:25,827 | INFO     | -- intersect: 8502963800.135226
[2025-06-04 13:28:39] 2025-06-04 12:28:25,827 | INFO     | current memory leak: -4.86 B/s (using 79 data points, chi2=0.00)
[2025-06-04 13:28:39] 2025-06-04 12:28:25,827 | INFO     | ..............................
[2025-06-04 13:28:39] 2025-06-04 12:28:25,827 | INFO     | . Timing measurements:
[2025-06-04 13:28:39] 2025-06-04 12:28:25,828 | INFO     | . get job = 0 s
[2025-06-04 13:28:39] 2025-06-04 12:28:25,828 | INFO     | . initial setup = 1 s
[2025-06-04 13:28:39] 2025-06-04 12:28:25,828 | INFO     | . payload setup = 6 s
[2025-06-04 13:28:39] 2025-06-04 12:28:25,828 | INFO     | . stage-in = 0 s
[2025-06-04 13:28:39] 2025-06-04 12:28:25,828 | INFO     | . payload execution = 5207 s
[2025-06-04 13:28:39] 2025-06-04 12:28:25,828 | INFO     | . stage-out = 0 s
[2025-06-04 13:28:39] 2025-06-04 12:28:25,828 | INFO     | . log creation = 0 s
[2025-06-04 13:28:39] 2025-06-04 12:28:25,828 | INFO     | ..............................
[2025-06-04 13:28:39] 2025-06-04 12:28:25,909 | INFO     | 
[2025-06-04 13:28:39] 2025-06-04 12:28:25,909 | INFO     | job summary report
[2025-06-04 13:28:39] 2025-06-04 12:28:25,909 | INFO     | --------------------------------------------------
[2025-06-04 13:28:39] 2025-06-04 12:28:25,909 | INFO     | PanDA job id: 6678313959
[2025-06-04 13:28:39] 2025-06-04 12:28:25,909 | INFO     | task id: 45006595
[2025-06-04 13:28:39] 2025-06-04 12:28:25,909 | INFO     | errors: (none)
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | pilot state: finished 
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | transexitcode: 0
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | exeerrorcode: 0
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | exeerrordiag: 
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | exitcode: 0
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | exitmsg: OK
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | cpuconsumptiontime: 19909 s
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | nevents: 400
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | neventsw: 0
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | pid: 3594955
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | pgrp: 3594955
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | corecount: 4
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | event service: False
[2025-06-04 13:28:39] 2025-06-04 12:28:25,910 | INFO     | sizes: {0: 2405191, 4: 2405397, 11: 2405425, 5216: 2431755, 5218: 2440710, 5220: 2440766, 5227: 2441064}
[2025-06-04 13:28:39] 2025-06-04 12:28:25,911 | INFO     | --------------------------------------------------
[2025-06-04 13:28:39] 2025-06-04 12:28:25,911 | INFO     | 
[2025-06-04 13:28:39] 2025-06-04 12:28:25,911 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-06-04 13:28:39] 2025-06-04 12:28:25,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,937 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:28:39] 2025-06-04 12:28:25,938 | INFO     | job 6678313959 has completed (purged errors)
[2025-06-04 13:28:39] 2025-06-04 12:28:25,938 | INFO     | overall cleanup function is called
[2025-06-04 13:28:39] 2025-06-04 12:28:26,946 | INFO     | --- collectZombieJob: --- 10, [3594955]
[2025-06-04 13:28:39] 2025-06-04 12:28:26,946 | INFO     | zombie collector waiting for pid 3594955
[2025-06-04 13:28:39] 2025-06-04 12:28:26,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:28:39] 2025-06-04 12:28:26,946 | INFO     | collected zombie processes
[2025-06-04 13:28:39] 2025-06-04 12:28:26,946 | INFO     | will attempt to kill all subprocesses of pid=3594955
[2025-06-04 13:28:39] 2025-06-04 12:28:27,233 | INFO     | process IDs to be killed: [3594955] (in reverse order)
[2025-06-04 13:28:39] 2025-06-04 12:28:27,371 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:28:39] 2025-06-04 12:28:27,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:28:39] 2025-06-04 12:28:27,380 | INFO     | did not find any defunct processes belonging to 3594955
[2025-06-04 13:28:39] 2025-06-04 12:28:27,387 | INFO     | did not find any defunct processes belonging to 3594955
[2025-06-04 13:28:39] 2025-06-04 12:28:27,387 | INFO     | ready for new job
[2025-06-04 13:28:39] 2025-06-04 12:28:27,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:28:39] 2025-06-04 12:28:27,389 | INFO     | **************************************
[2025-06-04 13:28:39] 2025-06-04 12:28:27,389 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:28:39] 2025-06-04 12:28:27,389 | INFO     | **************************************
[2025-06-04 13:28:39] 2025-06-04 12:28:27,389 | INFO     | 
[2025-06-04 13:28:39] 2025-06-04 12:28:27,392 | INFO     | pilot is running in a VM
[2025-06-04 13:28:39] 2025-06-04 12:28:27,392 | INFO     | architecture information:
[2025-06-04 13:28:39] 2025-06-04 12:28:27,392 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:28:39] 2025-06-04 12:28:27,408 | INFO     | cat /etc/os-release:
[2025-06-04 13:28:39] NAME="CentOS Linux"
[2025-06-04 13:28:39] VERSION="7 (Core)"
[2025-06-04 13:28:39] ID="centos"
[2025-06-04 13:28:39] ID_LIKE="rhel fedora"
[2025-06-04 13:28:39] VERSION_ID="7"
[2025-06-04 13:28:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:28:39] ANSI_COLOR="0;31"
[2025-06-04 13:28:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:28:39] HOME_URL="https://www.centos.org/"
[2025-06-04 13:28:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:28:39] 
[2025-06-04 13:28:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:28:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:28:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:28:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:28:39] 
[2025-06-04 13:28:39] 2025-06-04 12:28:27,408 | INFO     | **************************************
[2025-06-04 13:28:39] 2025-06-04 12:28:27,911 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-06-04 13:28:39] 2025-06-04 12:28:27,935 | INFO     | sufficient remaining disk space (112462921728 B)
[2025-06-04 13:28:39] 2025-06-04 12:28:27,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:28:39] 2025-06-04 12:28:27,935 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:28:39] 2025-06-04 12:28:27,936 | INFO     | update_server=False
[2025-06-04 13:28:39] 2025-06-04 12:28:27,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:28:39] 2025-06-04 12:28:27,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:28:39] 2025-06-04 12:28:27,936 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:28:39] 2025-06-04 12:28:27,936 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:28:39] 2025-06-04 12:28:27,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:28:39] 2025-06-04 12:28:27,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:28:39] 2025-06-04 12:28:27,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:28:39] 2025-06-04 12:28:27,937 | INFO     | aborting loop
[2025-06-04 13:28:39] 2025-06-04 12:28:28,832 | INFO     | all payload control threads have been joined
[2025-06-04 13:28:39] 2025-06-04 12:28:28,940 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:28,942 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:29,000 | INFO     | all data control threads have been joined
[2025-06-04 13:28:39] 2025-06-04 12:28:29,070 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:29,270 | INFO     | all job control threads have been joined
[2025-06-04 13:28:39] 2025-06-04 12:28:29,455 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:29,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:29,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:28:39] 2025-06-04 12:28:29,593 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:29,837 | INFO     | [payload] control thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:29,874 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:29,875 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:29,941 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:29,956 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:29,978 | INFO     | [job] validate thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:30,005 | INFO     | [data] control thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:30,273 | INFO     | [job] control thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:30,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:28:39] 2025-06-04 12:28:31,928 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:33,595 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:28:39] 2025-06-04 12:28:34,607 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132667562014528)>', '<ExcThread(monitor, started 132666993121024)>']
[2025-06-04 13:28:39] 2025-06-04 12:28:34,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:28:39] 2025-06-04 12:28:34,967 | INFO     | [monitor] control thread has ended
[2025-06-04 13:28:39] 2025-06-04 12:28:39,613 | INFO     | all workflow threads have been joined
[2025-06-04 13:28:39] 2025-06-04 12:28:39,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:28:39] 2025-06-04 12:28:39,614 | INFO     | traces error code: 0
[2025-06-04 13:28:39] 2025-06-04 12:28:39,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:28:39] 2025-06-04 12:28:39,755 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:28:39] 2025-06-04 12:28:39,759 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:28:39] 2025-06-04 12:28:39,762 [wrapper] pilotpid: 3588045
[2025-06-04 13:28:39] 2025-06-04 12:28:39,766 [wrapper] Pilot exit status: 0
[2025-06-04 13:28:39] 2025-06-04 12:28:39,777 [wrapper] pandaids: 6678313959
[2025-06-04 13:28:39] 2025-06-04 12:28:39,842 [wrapper] cleanup supervisor_pilot 3717686 3588046
[2025-06-04 13:28:39] 2025-06-04 12:28:39,845 [wrapper] Test setup, not cleaning
[2025-06-04 13:28:39] 2025-06-04 12:28:39,849 [wrapper] apfmon messages muted
[2025-06-04 13:28:39] 2025-06-04 12:28:39,852 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:28:39] 2025-06-04 12:28:39,855 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:28:39]  *** Error codes and diagnostics ***
[2025-06-04 13:28:39]     "exeErrorCode": 0,
[2025-06-04 13:28:39]     "exeErrorDiag": "",
[2025-06-04 13:28:39]     "pilotErrorCode": 0,
[2025-06-04 13:28:39]     "pilotErrorDiag": "",
[2025-06-04 13:28:39]  *** Listing of results directory ***
[2025-06-04 13:28:39] total 386060
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc    495897 Jun  4 05:58 pilot3.tar.gz
[2025-06-04 13:28:39] -rwx------ 1 boinc boinc     37140 Jun  4 06:01 runpilot2-wrapper.sh
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:01 queuedata.json
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:28:39] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:00 run_atlas
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:00 job.xml
[2025-06-04 13:28:39] -rw-r--r-- 2 boinc boinc 215731164 Jun  4 12:00 EVNT.45006593._002116.pool.root.1
[2025-06-04 13:28:39] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:00 start_atlas.sh
[2025-06-04 13:28:39] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:00 shared
[2025-06-04 13:28:39] -rw-r--r-- 2 boinc boinc    508880 Jun  4 12:00 input.tar.gz
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:00 boinc_lockfile
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc      2525 Jun  4 12:00 pandaJob.out
[2025-06-04 13:28:39] -rw------- 1 boinc boinc    986812 Jun  4 12:01 agis_schedconf.cvmfs.json
[2025-06-04 13:28:39] -rw------- 1 boinc boinc   1603667 Jun  4 12:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:28:39] drwx------ 4 boinc boinc      4096 Jun  4 12:01 pilot3
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc      6669 Jun  4 13:25 init_data.xml
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc       529 Jun  4 13:27 boinc_task_state.xml
[2025-06-04 13:28:39] -rw------- 1 boinc boinc 174218442 Jun  4 13:27 HITS.45006595._052844.pool.root.1
[2025-06-04 13:28:39] -rw------- 1 boinc boinc      1031 Jun  4 13:28 memory_monitor_summary.json
[2025-06-04 13:28:39] -rw------- 1 boinc boinc    254811 Jun  4 13:28 log.45006595._052844.job.log.tgz.1
[2025-06-04 13:28:39] -rw------- 1 boinc boinc        95 Jun  4 13:28 pilot_heartbeat.json
[2025-06-04 13:28:39] -rw------- 1 boinc boinc      7681 Jun  4 13:28 heartbeat.json
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc      8192 Jun  4 13:28 boinc_mmap_file
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc        27 Jun  4 13:28 wrapper_checkpoint.txt
[2025-06-04 13:28:39] -rw------- 1 boinc boinc      4546 Jun  4 13:28 pilotlog.txt
[2025-06-04 13:28:39] -rw------- 1 boinc boinc    514762 Jun  4 13:28 log.45006595._052844.job.log.1
[2025-06-04 13:28:39] -rw------- 1 boinc boinc       357 Jun  4 13:28 output.list
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc       620 Jun  4 13:28 runtime_log
[2025-06-04 13:28:39] -rw------- 1 boinc boinc    788480 Jun  4 13:28 result.tar.gz
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc      8748 Jun  4 13:28 runtime_log.err
[2025-06-04 13:28:39] -rw------- 1 boinc boinc       647 Jun  4 13:28 5k4NDmcQvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGjaKDmNnrzsn.diag
[2025-06-04 13:28:39] -rw-r--r-- 1 boinc boinc     21153 Jun  4 13:28 stderr.txt
[2025-06-04 13:28:39] HITS file was successfully produced:
[2025-06-04 13:28:39] -rw------- 1 boinc boinc 174218442 Jun  4 13:27 shared/HITS.pool.root.1
[2025-06-04 13:28:39]  *** Contents of shared directory: ***
[2025-06-04 13:28:39] total 382108
[2025-06-04 13:28:39] -rw-r--r-- 2 boinc boinc 215731164 Jun  4 12:00 ATLAS.root_0
[2025-06-04 13:28:39] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:00 start_atlas.sh
[2025-06-04 13:28:39] -rw-r--r-- 2 boinc boinc    508880 Jun  4 12:00 input.tar.gz
[2025-06-04 13:28:39] -rw------- 1 boinc boinc 174218442 Jun  4 13:27 HITS.pool.root.1
[2025-06-04 13:28:39] -rw------- 1 boinc boinc    788480 Jun  4 13:28 result.tar.gz
13:28:41 (3584180): run_atlas exited; CPU time 20042.783605
13:28:41 (3584180): called boinc_finish(0)

</stderr_txt>
]]>

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