Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:44:58 (1579702): wrapper (7.7.26015): starting
23:44:58 (1579702): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 23:44:58] Arguments: --nthreads 12
[2025-06-05 23:44:58] Threads: 12
[2025-06-05 23:44:58] Checking for CVMFS
[2025-06-05 23:44:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 23:44:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 23:44:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 23:44:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 23:44:59] 2.12.7.0 3695 1586 51800 146836 0 60 3872484 4096001 2736 130560 0 4359989 99.997 396696 119 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 23:44:59] CVMFS is ok
[2025-06-05 23:44:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 23:44:59] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 23:44:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 23:44:59] Further information can be found at the LHC@home message board.
[2025-06-05 23:44:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 23:44:59] Checking for apptainer binary...
[2025-06-05 23:44:59] apptainer is not installed, using version from CVMFS
[2025-06-05 23:44:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 23:45:00] dualxeon2
[2025-06-05 23:45:00] apptainer works
[2025-06-05 23:45:00] Set ATHENA_PROC_NUMBER=12
[2025-06-05 23:45:00] Set ATHENA_CORE_NUMBER=12
[2025-06-05 23:45:00] Starting ATLAS job with PandaID=6678362739
[2025-06-05 23:45:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 01:27:22]  *** The last 200 lines of the pilot log: ***
[2025-06-06 01:27:22] 2025-06-06 01:27:07,558 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6678362739/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 01:27:22] 2025-06-06 01:27:07,559 | INFO     | extracted standard info from prmon json
[2025-06-06 01:27:22] 2025-06-06 01:27:07,559 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 01:27:22] 2025-06-06 01:27:07,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 01:27:22] 2025-06-06 01:27:07,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 01:27:22] 2025-06-06 01:27:07,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 01:27:22] 2025-06-06 01:27:07,564 | INFO     | fitting pss+swap vs Time
[2025-06-06 01:27:22] 2025-06-06 01:27:07,564 | INFO     | sum of square deviations: 310052325.0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,564 | INFO     | sum of deviations: -2715587447.0000014
[2025-06-06 01:27:22] 2025-06-06 01:27:07,568 | INFO     | mean x: 1749170173.5
[2025-06-06 01:27:22] 2025-06-06 01:27:07,568 | INFO     | mean y: 2658509.76
[2025-06-06 01:27:22] 2025-06-06 01:27:07,568 | INFO     | -- intersect: 15322732519.278923
[2025-06-06 01:27:22] 2025-06-06 01:27:07,568 | INFO     | intersect: 15322732519.278923
[2025-06-06 01:27:22] 2025-06-06 01:27:07,568 | INFO     | chi2: 2.498277682522083
[2025-06-06 01:27:22] 2025-06-06 01:27:07,569 | INFO     | sum of square deviations: 265828240.0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,569 | INFO     | sum of deviations: 4361553984.999999
[2025-06-06 01:27:22] 2025-06-06 01:27:07,569 | INFO     | mean x: 1749170021.0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,570 | INFO     | mean y: 2681985.2210526317
[2025-06-06 01:27:22] 2025-06-06 01:27:07,570 | INFO     | -- intersect: -28696674695.37496
[2025-06-06 01:27:22] 2025-06-06 01:27:07,570 | INFO     | intersect: -28696674695.37496
[2025-06-06 01:27:22] 2025-06-06 01:27:07,570 | INFO     | chi2: 1.8116110739992877
[2025-06-06 01:27:22] 2025-06-06 01:27:07,570 | INFO     | current chi2=1.8116110739992877 (change=27.485599912559994 %)
[2025-06-06 01:27:22] 2025-06-06 01:27:07,570 | INFO     | sum of square deviations: 226022842.5
[2025-06-06 01:27:22] 2025-06-06 01:27:07,571 | INFO     | sum of deviations: 4618644676.499999
[2025-06-06 01:27:22] 2025-06-06 01:27:07,571 | INFO     | mean x: 1749169868.5
[2025-06-06 01:27:22] 2025-06-06 01:27:07,571 | INFO     | mean y: 2682969.5888888887
[2025-06-06 01:27:22] 2025-06-06 01:27:07,571 | INFO     | -- intersect: -35740580906.23697
[2025-06-06 01:27:22] 2025-06-06 01:27:07,571 | INFO     | intersect: -35740580906.23697
[2025-06-06 01:27:22] 2025-06-06 01:27:07,572 | INFO     | chi2: 1.8165062279179252
[2025-06-06 01:27:22] 2025-06-06 01:27:07,572 | INFO     | current chi2=1.8165062279179252 (change=-0.2702099798844247 %)
[2025-06-06 01:27:22] 2025-06-06 01:27:07,572 | INFO     | right removable region: 89
[2025-06-06 01:27:22] 2025-06-06 01:27:07,572 | INFO     | sum of square deviations: 265828240.0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,573 | INFO     | sum of deviations: -20385206005.0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,573 | INFO     | mean x: 1749170326.0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,573 | INFO     | mean y: 2718308.852631579
[2025-06-06 01:27:22] 2025-06-06 01:27:07,573 | INFO     | -- intersect: 134138946398.62596
[2025-06-06 01:27:22] 2025-06-06 01:27:07,573 | INFO     | intersect: 134138946398.62596
[2025-06-06 01:27:22] 2025-06-06 01:27:07,574 | INFO     | chi2: 0.87383464010431
[2025-06-06 01:27:22] 2025-06-06 01:27:07,574 | INFO     | current chi2=0.87383464010431 (change=65.02251746402551 %)
[2025-06-06 01:27:22] 2025-06-06 01:27:07,574 | INFO     | sum of square deviations: 226022842.5
[2025-06-06 01:27:22] 2025-06-06 01:27:07,574 | INFO     | sum of deviations: -20377978877.5
[2025-06-06 01:27:22] 2025-06-06 01:27:07,575 | INFO     | mean x: 1749170478.5
[2025-06-06 01:27:22] 2025-06-06 01:27:07,575 | INFO     | mean y: 2717969.322222222
[2025-06-06 01:27:22] 2025-06-06 01:27:07,575 | INFO     | -- intersect: 157706066311.29153
[2025-06-06 01:27:22] 2025-06-06 01:27:07,575 | INFO     | intersect: 157706066311.29153
[2025-06-06 01:27:22] 2025-06-06 01:27:07,575 | INFO     | chi2: 0.829421732580498
[2025-06-06 01:27:22] 2025-06-06 01:27:07,575 | INFO     | current chi2=0.829421732580498 (change=5.082529975981544 %)
[2025-06-06 01:27:22] 2025-06-06 01:27:07,575 | INFO     | left removable region: 20
[2025-06-06 01:27:22] 2025-06-06 01:27:07,576 | INFO     | sum of square deviations: 101843770.0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,576 | INFO     | sum of deviations: -6727300149.0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,576 | INFO     | mean x: 1749170448.0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,576 | INFO     | mean y: 2722931.637681159
[2025-06-06 01:27:22] 2025-06-06 01:27:07,576 | INFO     | -- intersect: 115544347278.97672
[2025-06-06 01:27:22] 2025-06-06 01:27:07,577 | INFO     | intersect: 115544347278.97672
[2025-06-06 01:27:22] 2025-06-06 01:27:07,577 | INFO     | chi2: 0.07896514887669567
[2025-06-06 01:27:22] 2025-06-06 01:27:07,577 | INFO     | -- intersect: 115544347278.97672
[2025-06-06 01:27:22] 2025-06-06 01:27:07,577 | INFO     | current memory leak: -66.06 B/s (using 69 data points, chi2=0.08)
[2025-06-06 01:27:22] 2025-06-06 01:27:07,578 | INFO     | ..............................
[2025-06-06 01:27:22] 2025-06-06 01:27:07,578 | INFO     | . Timing measurements:
[2025-06-06 01:27:22] 2025-06-06 01:27:07,578 | INFO     | . get job = 0 s
[2025-06-06 01:27:22] 2025-06-06 01:27:07,578 | INFO     | . initial setup = 2 s
[2025-06-06 01:27:22] 2025-06-06 01:27:07,578 | INFO     | . payload setup = 11 s
[2025-06-06 01:27:22] 2025-06-06 01:27:07,578 | INFO     | . stage-in = 0 s
[2025-06-06 01:27:22] 2025-06-06 01:27:07,578 | INFO     | . payload execution = 6067 s
[2025-06-06 01:27:22] 2025-06-06 01:27:07,578 | INFO     | . stage-out = 1 s
[2025-06-06 01:27:22] 2025-06-06 01:27:07,579 | INFO     | . log creation = 0 s
[2025-06-06 01:27:22] 2025-06-06 01:27:07,579 | INFO     | ..............................
[2025-06-06 01:27:22] 2025-06-06 01:27:07,740 | INFO     | 
[2025-06-06 01:27:22] 2025-06-06 01:27:07,741 | INFO     | job summary report
[2025-06-06 01:27:22] 2025-06-06 01:27:07,741 | INFO     | --------------------------------------------------
[2025-06-06 01:27:22] 2025-06-06 01:27:07,741 | INFO     | PanDA job id: 6678362739
[2025-06-06 01:27:22] 2025-06-06 01:27:07,741 | INFO     | task id: 45006595
[2025-06-06 01:27:22] 2025-06-06 01:27:07,741 | INFO     | errors: (none)
[2025-06-06 01:27:22] 2025-06-06 01:27:07,741 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 01:27:22] 2025-06-06 01:27:07,741 | INFO     | pilot state: finished 
[2025-06-06 01:27:22] 2025-06-06 01:27:07,741 | INFO     | transexitcode: 0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,742 | INFO     | exeerrorcode: 0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,742 | INFO     | exeerrordiag: 
[2025-06-06 01:27:22] 2025-06-06 01:27:07,742 | INFO     | exitcode: 0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,742 | INFO     | exitmsg: OK
[2025-06-06 01:27:22] 2025-06-06 01:27:07,742 | INFO     | cpuconsumptiontime: 48338 s
[2025-06-06 01:27:22] 2025-06-06 01:27:07,742 | INFO     | nevents: 400
[2025-06-06 01:27:22] 2025-06-06 01:27:07,742 | INFO     | neventsw: 0
[2025-06-06 01:27:22] 2025-06-06 01:27:07,742 | INFO     | pid: 1590154
[2025-06-06 01:27:22] 2025-06-06 01:27:07,742 | INFO     | pgrp: 1590154
[2025-06-06 01:27:22] 2025-06-06 01:27:07,742 | INFO     | corecount: 12
[2025-06-06 01:27:22] 2025-06-06 01:27:07,743 | INFO     | event service: False
[2025-06-06 01:27:22] 2025-06-06 01:27:07,743 | INFO     | sizes: {0: 2396508, 1: 2397371, 2: 2397371, 8: 2397605, 12: 2397633, 6082: 2424453, 6083: 2433408, 6086: 2433464, 6093: 2433634}
[2025-06-06 01:27:22] 2025-06-06 01:27:07,743 | INFO     | --------------------------------------------------
[2025-06-06 01:27:22] 2025-06-06 01:27:07,743 | INFO     | 
[2025-06-06 01:27:22] 2025-06-06 01:27:07,743 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-06-06 01:27:22] 2025-06-06 01:27:07,767 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,767 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,767 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,767 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,769 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 01:27:22] 2025-06-06 01:27:07,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,769 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 01:27:22] 2025-06-06 01:27:07,769 | INFO     | job 6678362739 has completed (purged errors)
[2025-06-06 01:27:22] 2025-06-06 01:27:07,774 | INFO     | overall cleanup function is called
[2025-06-06 01:27:22] 2025-06-06 01:27:08,788 | INFO     | --- collectZombieJob: --- 10, [1590154]
[2025-06-06 01:27:22] 2025-06-06 01:27:08,788 | INFO     | zombie collector waiting for pid 1590154
[2025-06-06 01:27:22] 2025-06-06 01:27:08,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 01:27:22] 2025-06-06 01:27:08,788 | INFO     | collected zombie processes
[2025-06-06 01:27:22] 2025-06-06 01:27:08,788 | INFO     | will attempt to kill all subprocesses of pid=1590154
[2025-06-06 01:27:22] 2025-06-06 01:27:09,024 | INFO     | process IDs to be killed: [1590154] (in reverse order)
[2025-06-06 01:27:22] 2025-06-06 01:27:09,099 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 01:27:22] 2025-06-06 01:27:09,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 01:27:22] 2025-06-06 01:27:09,107 | INFO     | did not find any defunct processes belonging to 1590154
[2025-06-06 01:27:22] 2025-06-06 01:27:09,112 | INFO     | did not find any defunct processes belonging to 1590154
[2025-06-06 01:27:22] 2025-06-06 01:27:09,112 | INFO     | ready for new job
[2025-06-06 01:27:22] 2025-06-06 01:27:09,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 01:27:22] 2025-06-06 01:27:09,123 | INFO     | **************************************
[2025-06-06 01:27:22] 2025-06-06 01:27:09,123 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 01:27:22] 2025-06-06 01:27:09,124 | INFO     | **************************************
[2025-06-06 01:27:22] 2025-06-06 01:27:09,124 | INFO     | 
[2025-06-06 01:27:22] 2025-06-06 01:27:09,129 | INFO     | architecture information:
[2025-06-06 01:27:22] 2025-06-06 01:27:09,129 | INFO     | executing command: cat /etc/os-release
[2025-06-06 01:27:22] 2025-06-06 01:27:09,153 | INFO     | cat /etc/os-release:
[2025-06-06 01:27:22] NAME="CentOS Linux"
[2025-06-06 01:27:22] VERSION="7 (Core)"
[2025-06-06 01:27:22] ID="centos"
[2025-06-06 01:27:22] ID_LIKE="rhel fedora"
[2025-06-06 01:27:22] VERSION_ID="7"
[2025-06-06 01:27:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 01:27:22] ANSI_COLOR="0;31"
[2025-06-06 01:27:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 01:27:22] HOME_URL="https://www.centos.org/"
[2025-06-06 01:27:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 01:27:22] 
[2025-06-06 01:27:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 01:27:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 01:27:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 01:27:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 01:27:22] 
[2025-06-06 01:27:22] 2025-06-06 01:27:09,154 | INFO     | **************************************
[2025-06-06 01:27:22] 2025-06-06 01:27:09,656 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-06-06 01:27:22] 2025-06-06 01:27:09,677 | INFO     | sufficient remaining disk space (91627716608 B)
[2025-06-06 01:27:22] 2025-06-06 01:27:09,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 01:27:22] 2025-06-06 01:27:09,678 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 01:27:22] 2025-06-06 01:27:09,678 | INFO     | update_server=False
[2025-06-06 01:27:22] 2025-06-06 01:27:09,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 01:27:22] 2025-06-06 01:27:09,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:27:22] 2025-06-06 01:27:09,682 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 01:27:22] 2025-06-06 01:27:09,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 01:27:22] 2025-06-06 01:27:09,683 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 01:27:22] 2025-06-06 01:27:09,685 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 01:27:22] 2025-06-06 01:27:09,685 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 01:27:22] 2025-06-06 01:27:09,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 01:27:22] 2025-06-06 01:27:09,692 | INFO     | aborting loop
[2025-06-06 01:27:22] 2025-06-06 01:27:09,871 | INFO     | all data control threads have been joined
[2025-06-06 01:27:22] 2025-06-06 01:27:10,150 | INFO     | all payload control threads have been joined
[2025-06-06 01:27:22] 2025-06-06 01:27:10,249 | INFO     | all job control threads have been joined
[2025-06-06 01:27:22] 2025-06-06 01:27:10,687 | INFO     | [job] queue monitor thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:10,687 | INFO     | [job] retrieve thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:10,697 | INFO     | [job] job monitor thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:10,876 | INFO     | [data] control thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:10,888 | INFO     | [payload] validate_post thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:11,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 01:27:22] 2025-06-06 01:27:11,155 | INFO     | [payload] control thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:11,254 | INFO     | [job] control thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:11,321 | INFO     | [payload] failed_post thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:11,368 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:11,368 | INFO     | [job] validate thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:11,486 | INFO     | [data] copytool_in thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:11,595 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:11,693 | INFO     | [data] copytool_out thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:11,902 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:12,150 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:15,149 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 01:27:22] 2025-06-06 01:27:16,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129233401935680)>', '<ExcThread(monitor, started 129232252421888)>']
[2025-06-06 01:27:22] 2025-06-06 01:27:17,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 01:27:22] 2025-06-06 01:27:17,725 | INFO     | [monitor] control thread has ended
[2025-06-06 01:27:22] 2025-06-06 01:27:21,979 | INFO     | all workflow threads have been joined
[2025-06-06 01:27:22] 2025-06-06 01:27:21,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 01:27:22] 2025-06-06 01:27:21,979 | INFO     | traces error code: 0
[2025-06-06 01:27:22] 2025-06-06 01:27:21,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 01:27:22] 2025-06-06 01:27:22,122 [wrapper] ==== pilot stdout END ====
[2025-06-06 01:27:22] 2025-06-06 01:27:22,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 01:27:22] 2025-06-06 01:27:22,131 [wrapper] pilotpid: 1583455
[2025-06-06 01:27:22] 2025-06-06 01:27:22,137 [wrapper] Pilot exit status: 0
[2025-06-06 01:27:22] 2025-06-06 01:27:22,157 [wrapper] pandaids: 6678362739
[2025-06-06 01:27:22] 2025-06-06 01:27:22,220 [wrapper] cleanup supervisor_pilot 1672907 1583456
[2025-06-06 01:27:22] 2025-06-06 01:27:22,224 [wrapper] Test setup, not cleaning
[2025-06-06 01:27:22] 2025-06-06 01:27:22,226 [wrapper] apfmon messages muted
[2025-06-06 01:27:22] 2025-06-06 01:27:22,233 [wrapper] ==== wrapper stdout END ====
[2025-06-06 01:27:22] 2025-06-06 01:27:22,235 [wrapper] ==== wrapper stderr END ====
[2025-06-06 01:27:22]  *** Error codes and diagnostics ***
[2025-06-06 01:27:22]     "exeErrorCode": 0,
[2025-06-06 01:27:22]     "exeErrorDiag": "",
[2025-06-06 01:27:22]     "pilotErrorCode": 0,
[2025-06-06 01:27:22]     "pilotErrorDiag": "",
[2025-06-06 01:27:22]  *** Listing of results directory ***
[2025-06-06 01:27:22] total 392628
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:13 queuedata.json
[2025-06-06 01:27:22] -rwx------ 1 boinc boinc     37140 Jun  4 05:14 runpilot2-wrapper.sh
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc       100 Jun  5 23:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 01:27:22] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 23:44 run_atlas
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc       105 Jun  5 23:44 job.xml
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc      6555 Jun  5 23:44 init_data.xml
[2025-06-06 01:27:22] -rw-r--r-- 2 boinc boinc 215486151 Jun  5 23:44 EVNT.45006593._002131.pool.root.1
[2025-06-06 01:27:22] -rw-r--r-- 2 boinc boinc     15093 Jun  5 23:44 start_atlas.sh
[2025-06-06 01:27:22] drwxrwx--x 2 boinc boinc      4096 Jun  5 23:44 shared
[2025-06-06 01:27:22] -rw-r--r-- 2 boinc boinc    508882 Jun  5 23:44 input.tar.gz
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc         0 Jun  5 23:44 boinc_lockfile
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc      2522 Jun  5 23:45 pandaJob.out
[2025-06-06 01:27:22] -rw------- 1 boinc boinc    987721 Jun  5 23:45 agis_schedconf.cvmfs.json
[2025-06-06 01:27:22] -rw------- 1 boinc boinc   1598969 Jun  5 23:45 agis_ddmendpoints.agis.ALL.json
[2025-06-06 01:27:22] drwx------ 4 boinc boinc      4096 Jun  5 23:45 pilot3
[2025-06-06 01:27:22] -rw------- 1 boinc boinc 180818438 Jun  6 01:26 HITS.45006595._053234.pool.root.1
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc       530 Jun  6 01:26 boinc_task_state.xml
[2025-06-06 01:27:22] -rw------- 1 boinc boinc      1020 Jun  6 01:26 memory_monitor_summary.json
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc      8192 Jun  6 01:26 boinc_mmap_file
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc        27 Jun  6 01:26 wrapper_checkpoint.txt
[2025-06-06 01:27:22] -rw------- 1 boinc boinc    360518 Jun  6 01:26 log.45006595._053234.job.log.tgz.1
[2025-06-06 01:27:22] -rw------- 1 boinc boinc        95 Jun  6 01:27 pilot_heartbeat.json
[2025-06-06 01:27:22] -rw------- 1 boinc boinc      7670 Jun  6 01:27 heartbeat.json
[2025-06-06 01:27:22] -rw------- 1 boinc boinc      4483 Jun  6 01:27 pilotlog.txt
[2025-06-06 01:27:22] -rw------- 1 boinc boinc    592209 Jun  6 01:27 log.45006595._053234.job.log.1
[2025-06-06 01:27:22] -rw------- 1 boinc boinc       357 Jun  6 01:27 output.list
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc       620 Jun  6 01:27 runtime_log
[2025-06-06 01:27:22] -rw------- 1 boinc boinc    972800 Jun  6 01:27 result.tar.gz
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc      8726 Jun  6 01:27 runtime_log.err
[2025-06-06 01:27:22] -rw------- 1 boinc boinc       647 Jun  6 01:27 d3XMDmxdvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjLnKDmSCzIPo.diag
[2025-06-06 01:27:22] -rw-r--r-- 1 boinc boinc     20957 Jun  6 01:27 stderr.txt
[2025-06-06 01:27:22] HITS file was successfully produced:
[2025-06-06 01:27:22] -rw------- 1 boinc boinc 180818438 Jun  6 01:26 shared/HITS.pool.root.1
[2025-06-06 01:27:22]  *** Contents of shared directory: ***
[2025-06-06 01:27:22] total 388496
[2025-06-06 01:27:22] -rw-r--r-- 2 boinc boinc 215486151 Jun  5 23:44 ATLAS.root_0
[2025-06-06 01:27:22] -rw-r--r-- 2 boinc boinc     15093 Jun  5 23:44 start_atlas.sh
[2025-06-06 01:27:22] -rw-r--r-- 2 boinc boinc    508882 Jun  5 23:44 input.tar.gz
[2025-06-06 01:27:22] -rw------- 1 boinc boinc 180818438 Jun  6 01:26 HITS.pool.root.1
[2025-06-06 01:27:22] -rw------- 1 boinc boinc    972800 Jun  6 01:27 result.tar.gz
01:27:24 (1579702): run_atlas exited; CPU time 48403.474108
01:27:24 (1579702): called boinc_finish(0)

</stderr_txt>
]]>

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