Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:07:52 (539): wrapper (7.7.26015): starting
06:07:52 (539): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 06:07:52] Arguments: --nthreads 12
[2025-06-04 06:07:52] Threads: 12
[2025-06-04 06:07:52] Checking for CVMFS
[2025-06-04 06:07:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:07:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:07:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:07:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:07:52] 2.11.2.0 4366 35494 117732 146775 1 63 17989738 18432000 1093 130560 0 17887962 99.223 35266159 21155 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:07:52] CVMFS is ok
[2025-06-04 06:07:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:07:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:07:52] Further information can be found at the LHC@home message board.
[2025-06-04 06:07:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:07:52] Checking for apptainer binary...
[2025-06-04 06:07:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:07:52] Running /usr/bin/apptainer --version
[2025-06-04 06:07:52] apptainer version 1.3.2-1.el7
[2025-06-04 06:07:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:07:53] c-206-29.aglt2.org
[2025-06-04 06:07:53] apptainer works
[2025-06-04 06:07:53] Set ATHENA_PROC_NUMBER=12
[2025-06-04 06:07:53] Set ATHENA_CORE_NUMBER=12
[2025-06-04 06:07:53] Starting ATLAS job with PandaID=6678362622
[2025-06-04 06:07:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:50:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:50:12] 2025-06-04 11:49:56,501 | INFO     | mean x: 1749034727.5
[2025-06-04 07:50:12] 2025-06-04 11:49:56,501 | INFO     | mean y: 2624910.37
[2025-06-04 07:50:12] 2025-06-04 11:49:56,501 | INFO     | -- intersect: -89467932646.02861
[2025-06-04 07:50:12] 2025-06-04 11:49:56,501 | INFO     | intersect: -89467932646.02861
[2025-06-04 07:50:12] 2025-06-04 11:49:56,501 | INFO     | chi2: 1.3087194698525901
[2025-06-04 07:50:12] 2025-06-04 11:49:56,501 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,502 | INFO     | sum of deviations: 15146475741.0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,502 | INFO     | mean x: 1749034575.0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,502 | INFO     | mean y: 2622446.042105263
[2025-06-04 07:50:12] 2025-06-04 11:49:56,502 | INFO     | -- intersect: -99654621496.16565
[2025-06-04 07:50:12] 2025-06-04 11:49:56,502 | INFO     | intersect: -99654621496.16565
[2025-06-04 07:50:12] 2025-06-04 11:49:56,502 | INFO     | chi2: 1.3087106980264505
[2025-06-04 07:50:12] 2025-06-04 11:49:56,503 | INFO     | current chi2=1.3087106980264505 (change=0.0006702602308394807 %)
[2025-06-04 07:50:12] 2025-06-04 11:49:56,503 | INFO     | right removable region: 94
[2025-06-04 07:50:12] 2025-06-04 11:49:56,503 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,503 | INFO     | sum of deviations: 1377612288.0000002
[2025-06-04 07:50:12] 2025-06-04 11:49:56,503 | INFO     | mean x: 1749034880.0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,504 | INFO     | mean y: 2673729.2736842106
[2025-06-04 07:50:12] 2025-06-04 11:49:56,504 | INFO     | -- intersect: -9061419471.766981
[2025-06-04 07:50:12] 2025-06-04 11:49:56,504 | INFO     | intersect: -9061419471.766981
[2025-06-04 07:50:12] 2025-06-04 11:49:56,504 | INFO     | chi2: 0.05713575205365298
[2025-06-04 07:50:12] 2025-06-04 11:49:56,504 | INFO     | current chi2=0.05713575205365298 (change=95.6342246470828 %)
[2025-06-04 07:50:12] 2025-06-04 11:49:56,505 | INFO     | sum of square deviations: 226022842.5
[2025-06-04 07:50:12] 2025-06-04 11:49:56,505 | INFO     | sum of deviations: -1310028374.9999995
[2025-06-04 07:50:12] 2025-06-04 11:49:56,505 | INFO     | mean x: 1749035032.5
[2025-06-04 07:50:12] 2025-06-04 11:49:56,505 | INFO     | mean y: 2683758.6666666665
[2025-06-04 07:50:12] 2025-06-04 11:49:56,505 | INFO     | -- intersect: 10140090651.264463
[2025-06-04 07:50:12] 2025-06-04 11:49:56,505 | INFO     | intersect: 10140090651.264463
[2025-06-04 07:50:12] 2025-06-04 11:49:56,506 | INFO     | chi2: 0.005387553755129425
[2025-06-04 07:50:12] 2025-06-04 11:49:56,506 | INFO     | current chi2=0.005387553755129425 (change=90.57060848683626 %)
[2025-06-04 07:50:12] 2025-06-04 11:49:56,506 | INFO     | sum of square deviations: 190403570.0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,506 | INFO     | sum of deviations: -1682377681.9999998
[2025-06-04 07:50:12] 2025-06-04 11:49:56,506 | INFO     | mean x: 1749035185.0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,506 | INFO     | mean y: 2685345.1647058823
[2025-06-04 07:50:12] 2025-06-04 11:49:56,507 | INFO     | -- intersect: 15456900622.098541
[2025-06-04 07:50:12] 2025-06-04 11:49:56,507 | INFO     | intersect: 15456900622.098541
[2025-06-04 07:50:12] 2025-06-04 11:49:56,507 | INFO     | chi2: 0.0038230973387163676
[2025-06-04 07:50:12] 2025-06-04 11:49:56,507 | INFO     | current chi2=0.0038230973387163676 (change=29.03834444201243 %)
[2025-06-04 07:50:12] 2025-06-04 11:49:56,507 | INFO     | sum of square deviations: 158737860.0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,507 | INFO     | sum of deviations: -1815576855.0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,508 | INFO     | mean x: 1749035337.5
[2025-06-04 07:50:12] 2025-06-04 11:49:56,508 | INFO     | mean y: 2685978.625
[2025-06-04 07:50:12] 2025-06-04 11:49:56,508 | INFO     | -- intersect: 20007416276.37573
[2025-06-04 07:50:12] 2025-06-04 11:49:56,508 | INFO     | intersect: 20007416276.37573
[2025-06-04 07:50:12] 2025-06-04 11:49:56,508 | INFO     | chi2: 0.0029201514775045825
[2025-06-04 07:50:12] 2025-06-04 11:49:56,508 | INFO     | current chi2=0.0029201514775045825 (change=23.618176081149837 %)
[2025-06-04 07:50:12] 2025-06-04 11:49:56,508 | INFO     | left removable region: 40
[2025-06-04 07:50:12] 2025-06-04 11:49:56,508 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 07:50:12] 2025-06-04 11:49:56,509 | INFO     | sum of deviations: -903715305.0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,509 | INFO     | mean x: 1749035764.5
[2025-06-04 07:50:12] 2025-06-04 11:49:56,509 | INFO     | mean y: 2680734.1481481483
[2025-06-04 07:50:12] 2025-06-04 11:49:56,509 | INFO     | -- intersect: 32385867499.72701
[2025-06-04 07:50:12] 2025-06-04 11:49:56,509 | INFO     | intersect: 32385867499.72701
[2025-06-04 07:50:12] 2025-06-04 11:49:56,509 | INFO     | chi2: 0.0017453827299968637
[2025-06-04 07:50:12] 2025-06-04 11:49:56,509 | INFO     | -- intersect: 32385867499.72701
[2025-06-04 07:50:12] 2025-06-04 11:49:56,510 | INFO     | current memory leak: -18.51 B/s (using 54 data points, chi2=0.00)
[2025-06-04 07:50:12] 2025-06-04 11:49:56,510 | INFO     | ..............................
[2025-06-04 07:50:12] 2025-06-04 11:49:56,510 | INFO     | . Timing measurements:
[2025-06-04 07:50:12] 2025-06-04 11:49:56,510 | INFO     | . get job = 0 s
[2025-06-04 07:50:12] 2025-06-04 11:49:56,510 | INFO     | . initial setup = 2 s
[2025-06-04 07:50:12] 2025-06-04 11:49:56,510 | INFO     | . payload setup = 6 s
[2025-06-04 07:50:12] 2025-06-04 11:49:56,510 | INFO     | . stage-in = 0 s
[2025-06-04 07:50:12] 2025-06-04 11:49:56,510 | INFO     | . payload execution = 6081 s
[2025-06-04 07:50:12] 2025-06-04 11:49:56,511 | INFO     | . stage-out = 0 s
[2025-06-04 07:50:12] 2025-06-04 11:49:56,511 | INFO     | . log creation = 0 s
[2025-06-04 07:50:12] 2025-06-04 11:49:56,511 | INFO     | ..............................
[2025-06-04 07:50:12] 2025-06-04 11:49:56,592 | INFO     | 
[2025-06-04 07:50:12] 2025-06-04 11:49:56,592 | INFO     | job summary report
[2025-06-04 07:50:12] 2025-06-04 11:49:56,592 | INFO     | --------------------------------------------------
[2025-06-04 07:50:12] 2025-06-04 11:49:56,592 | INFO     | PanDA job id: 6678362622
[2025-06-04 07:50:12] 2025-06-04 11:49:56,592 | INFO     | task id: 45006595
[2025-06-04 07:50:12] 2025-06-04 11:49:56,592 | INFO     | errors: (none)
[2025-06-04 07:50:12] 2025-06-04 11:49:56,592 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:50:12] 2025-06-04 11:49:56,593 | INFO     | pilot state: finished 
[2025-06-04 07:50:12] 2025-06-04 11:49:56,593 | INFO     | transexitcode: 0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,593 | INFO     | exeerrorcode: 0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,593 | INFO     | exeerrordiag: 
[2025-06-04 07:50:12] 2025-06-04 11:49:56,593 | INFO     | exitcode: 0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,593 | INFO     | exitmsg: OK
[2025-06-04 07:50:12] 2025-06-04 11:49:56,593 | INFO     | cpuconsumptiontime: 65347 s
[2025-06-04 07:50:12] 2025-06-04 11:49:56,593 | INFO     | nevents: 400
[2025-06-04 07:50:12] 2025-06-04 11:49:56,593 | INFO     | neventsw: 0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,593 | INFO     | pid: 10999
[2025-06-04 07:50:12] 2025-06-04 11:49:56,594 | INFO     | pgrp: 10999
[2025-06-04 07:50:12] 2025-06-04 11:49:56,594 | INFO     | corecount: 12
[2025-06-04 07:50:12] 2025-06-04 11:49:56,594 | INFO     | event service: False
[2025-06-04 07:50:12] 2025-06-04 11:49:56,594 | INFO     | sizes: {0: 2404356, 1: 2405212, 4: 2405418, 12: 2405446, 6091: 2432222, 6093: 2441347, 6099: 2441461}
[2025-06-04 07:50:12] 2025-06-04 11:49:56,594 | INFO     | --------------------------------------------------
[2025-06-04 07:50:12] 2025-06-04 11:49:56,594 | INFO     | 
[2025-06-04 07:50:12] 2025-06-04 11:49:56,594 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:50:12] 2025-06-04 11:49:56,614 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,614 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,614 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,614 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,615 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,615 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,615 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,616 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:50:12] 2025-06-04 11:49:56,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,616 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:50:12] 2025-06-04 11:49:56,616 | INFO     | job 6678362622 has completed (purged errors)
[2025-06-04 07:50:12] 2025-06-04 11:49:56,616 | INFO     | overall cleanup function is called
[2025-06-04 07:50:12] 2025-06-04 11:49:57,624 | INFO     | --- collectZombieJob: --- 10, [10999]
[2025-06-04 07:50:12] 2025-06-04 11:49:57,624 | INFO     | zombie collector waiting for pid 10999
[2025-06-04 07:50:12] 2025-06-04 11:49:57,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:50:12] 2025-06-04 11:49:57,624 | INFO     | collected zombie processes
[2025-06-04 07:50:12] 2025-06-04 11:49:57,624 | INFO     | will attempt to kill all subprocesses of pid=10999
[2025-06-04 07:50:12] 2025-06-04 11:49:57,727 | INFO     | process IDs to be killed: [10999] (in reverse order)
[2025-06-04 07:50:12] 2025-06-04 11:49:57,776 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:50:12] 2025-06-04 11:49:57,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:50:12] 2025-06-04 11:49:57,779 | INFO     | did not find any defunct processes belonging to 10999
[2025-06-04 07:50:12] 2025-06-04 11:49:57,782 | INFO     | did not find any defunct processes belonging to 10999
[2025-06-04 07:50:12] 2025-06-04 11:49:57,782 | INFO     | ready for new job
[2025-06-04 07:50:12] 2025-06-04 11:49:57,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:50:12] 2025-06-04 11:49:57,783 | INFO     | **************************************
[2025-06-04 07:50:12] 2025-06-04 11:49:57,783 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:50:12] 2025-06-04 11:49:57,783 | INFO     | **************************************
[2025-06-04 07:50:12] 2025-06-04 11:49:57,783 | INFO     | 
[2025-06-04 07:50:12] 2025-06-04 11:49:57,784 | INFO     | architecture information:
[2025-06-04 07:50:12] 2025-06-04 11:49:57,785 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:50:12] 2025-06-04 11:49:57,799 | INFO     | cat /etc/os-release:
[2025-06-04 07:50:12] NAME="CentOS Linux"
[2025-06-04 07:50:12] VERSION="7 (Core)"
[2025-06-04 07:50:12] ID="centos"
[2025-06-04 07:50:12] ID_LIKE="rhel fedora"
[2025-06-04 07:50:12] VERSION_ID="7"
[2025-06-04 07:50:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:50:12] ANSI_COLOR="0;31"
[2025-06-04 07:50:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:50:12] HOME_URL="https://www.centos.org/"
[2025-06-04 07:50:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:50:12] 
[2025-06-04 07:50:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:50:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:50:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:50:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:50:12] 
[2025-06-04 07:50:12] 2025-06-04 11:49:57,799 | INFO     | **************************************
[2025-06-04 07:50:12] 2025-06-04 11:49:58,302 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:50:12] 2025-06-04 11:49:58,314 | INFO     | sufficient remaining disk space (29222764544 B)
[2025-06-04 07:50:12] 2025-06-04 11:49:58,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:50:12] 2025-06-04 11:49:58,315 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:50:12] 2025-06-04 11:49:58,315 | INFO     | update_server=False
[2025-06-04 07:50:12] 2025-06-04 11:49:58,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:50:12] 2025-06-04 11:49:58,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:50:12] 2025-06-04 11:49:58,321 | INFO     | all job control threads have been joined
[2025-06-04 07:50:12] 2025-06-04 11:49:58,400 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:50:12] 2025-06-04 11:49:58,400 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:50:12] 2025-06-04 11:49:58,400 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:50:12] 2025-06-04 11:49:58,400 | INFO     | will abort loop
[2025-06-04 07:50:12] 2025-06-04 11:49:58,497 | INFO     | all payload control threads have been joined
[2025-06-04 07:50:12] 2025-06-04 11:49:58,938 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:50:12] 2025-06-04 11:49:58,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:50:12] 2025-06-04 11:49:58,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:50:12] 2025-06-04 11:49:59,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:50:12] 2025-06-04 11:49:59,148 | INFO     | all data control threads have been joined
[2025-06-04 07:50:12] 2025-06-04 11:49:59,320 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:49:59,320 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:49:59,326 | INFO     | [job] control thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:49:59,406 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:49:59,406 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:49:59,502 | INFO     | [payload] control thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:49:59,649 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:49:59,677 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:50:00,066 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:50:00,150 | INFO     | [data] control thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:50:00,472 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:50:00,541 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:50:00,675 | INFO     | [job] validate thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:50:00,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:50:01,094 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:50:01,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:50:12] 2025-06-04 11:50:05,664 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:50:12] 2025-06-04 11:50:07,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054006331200)>', '<ExcThread(monitor, started 140053405738752)>']
[2025-06-04 07:50:12] 2025-06-04 11:50:07,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:50:12] 2025-06-04 11:50:07,976 | INFO     | [monitor] control thread has ended
[2025-06-04 07:50:12] 2025-06-04 11:50:12,480 | INFO     | all workflow threads have been joined
[2025-06-04 07:50:12] 2025-06-04 11:50:12,480 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:50:12] 2025-06-04 11:50:12,480 | INFO     | traces error code: 0
[2025-06-04 07:50:12] 2025-06-04 11:50:12,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:50:12] 2025-06-04 11:50:12,567 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:50:12] 2025-06-04 11:50:12,570 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:50:12] 2025-06-04 11:50:12,573 [wrapper] pilotpid: 4325
[2025-06-04 07:50:12] 2025-06-04 11:50:12,576 [wrapper] Pilot exit status: 0
[2025-06-04 07:50:12] 2025-06-04 11:50:12,587 [wrapper] pandaids: 6678362622
[2025-06-04 07:50:12] 2025-06-04 11:50:12,620 [wrapper] cleanup supervisor_pilot 27334 4326
[2025-06-04 07:50:12] 2025-06-04 11:50:12,623 [wrapper] Test setup, not cleaning
[2025-06-04 07:50:12] 2025-06-04 11:50:12,625 [wrapper] apfmon messages muted
[2025-06-04 07:50:12] 2025-06-04 11:50:12,628 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:50:12] 2025-06-04 11:50:12,630 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:50:12]  *** Error codes and diagnostics ***
[2025-06-04 07:50:12]     "exeErrorCode": 0,
[2025-06-04 07:50:12]     "exeErrorDiag": "",
[2025-06-04 07:50:12]     "pilotErrorCode": 0,
[2025-06-04 07:50:12]     "pilotErrorDiag": "",
[2025-06-04 07:50:12]  *** Listing of results directory ***
[2025-06-04 07:50:12] total 387132
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 01:13 queuedata.json
[2025-06-04 07:50:12] -rwx------ 1 boincer umatlas     37140 Jun  4 01:16 runpilot2-wrapper.sh
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:50:12] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:07 run_atlas
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:07 job.xml
[2025-06-04 07:50:12] -rw-r--r-- 2 boincer umatlas 215833839 Jun  4 06:07 EVNT.45006593._002126.pool.root.1
[2025-06-04 07:50:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:07 start_atlas.sh
[2025-06-04 07:50:12] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:07 shared
[2025-06-04 07:50:12] -rw-r--r-- 2 boincer umatlas    508886 Jun  4 06:07 input.tar.gz
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:07 boinc_lockfile
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 06:07 pandaJob.out
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas    986766 Jun  4 06:08 agis_schedconf.cvmfs.json
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas   1603667 Jun  4 06:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:50:12] drwx------ 4 boincer umatlas      4096 Jun  4 06:08 pilot3
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas      5949 Jun  4 07:46 init_data.xml
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas 174811975 Jun  4 07:49 HITS.45006595._053117.pool.root.1
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas       529 Jun  4 07:49 boinc_task_state.xml
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas      1048 Jun  4 07:49 memory_monitor_summary.json
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas    372815 Jun  4 07:49 log.45006595._053117.job.log.tgz.1
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas        95 Jun  4 07:49 pilot_heartbeat.json
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas      7752 Jun  4 07:49 heartbeat.json
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:50 boinc_mmap_file
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:50 wrapper_checkpoint.txt
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas      4539 Jun  4 07:50 pilotlog.txt
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas    596341 Jun  4 07:50 log.45006595._053117.job.log.1
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas       357 Jun  4 07:50 output.list
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:50 runtime_log
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas    993280 Jun  4 07:50 result.tar.gz
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 07:50 runtime_log.err
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas       659 Jun  4 07:50 AKnMDmbfvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxLnKDmIIRrbm.diag
[2025-06-04 07:50:12] -rw-r--r-- 1 boincer umatlas     20700 Jun  4 07:50 stderr.txt
[2025-06-04 07:50:12] HITS file was successfully produced:
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas 174811975 Jun  4 07:49 shared/HITS.pool.root.1
[2025-06-04 07:50:12]  *** Contents of shared directory: ***
[2025-06-04 07:50:12] total 382984
[2025-06-04 07:50:12] -rw-r--r-- 2 boincer umatlas 215833839 Jun  4 06:07 ATLAS.root_0
[2025-06-04 07:50:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:07 start_atlas.sh
[2025-06-04 07:50:12] -rw-r--r-- 2 boincer umatlas    508886 Jun  4 06:07 input.tar.gz
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas 174811975 Jun  4 07:49 HITS.pool.root.1
[2025-06-04 07:50:12] -rw------- 1 boincer umatlas    993280 Jun  4 07:50 result.tar.gz
07:50:14 (539): run_atlas exited; CPU time 65343.523140
07:50:14 (539): called boinc_finish(0)

</stderr_txt>
]]>

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