Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:56:01 (25891): wrapper (7.7.26015): starting
19:56:01 (25891): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:56:01] Arguments: --nthreads 8
[2025-06-04 19:56:01] Threads: 8
[2025-06-04 19:56:01] Checking for CVMFS
[2025-06-04 19:56:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:56:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:56:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:56:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:56:02] 2.11.2.0 7198 33554 94832 146789 2 260 24964605 25165825 3028 130560 0 17743062 99.802 19402139 2164 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 19:56:02] CVMFS is ok
[2025-06-04 19:56:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:56:02] Checking for apptainer binary...
[2025-06-04 19:56:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:56:02] Running /usr/bin/apptainer --version
[2025-06-04 19:56:02] apptainer version 1.3.2-1.el7
[2025-06-04 19:56:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:56:04] cg-vwn468.simple-grid.lan
[2025-06-04 19:56:04] apptainer works
[2025-06-04 19:56:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:56:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:56:04] Starting ATLAS job with PandaID=6678593021
[2025-06-04 19:56:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:04:16]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:04:16] 2025-06-04 21:21:34,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:04:16] 2025-06-04 21:21:34,721 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:04:16] 2025-06-04 21:21:34,721 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:04:16] 2025-06-04 21:21:34,725 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:04:16] 2025-06-04 21:21:34,726 | INFO     | sum of square deviations: 2480604650.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,733 | INFO     | sum of deviations: 23771971632.999996
[2025-06-05 00:04:16] 2025-06-04 21:21:34,734 | INFO     | mean x: 1749065906.5
[2025-06-05 00:04:16] 2025-06-04 21:21:34,734 | INFO     | mean y: 2448732.58
[2025-06-05 00:04:16] 2025-06-04 21:21:34,734 | INFO     | -- intersect: -16759087658.785479
[2025-06-05 00:04:16] 2025-06-04 21:21:34,734 | INFO     | intersect: -16759087658.785479
[2025-06-05 00:04:16] 2025-06-04 21:21:34,734 | INFO     | chi2: 2.3411519222660164
[2025-06-05 00:04:16] 2025-06-04 21:21:34,735 | INFO     | sum of square deviations: 2299168690.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,736 | INFO     | sum of deviations: 36091930817.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,737 | INFO     | mean x: 1749065754.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,737 | INFO     | mean y: 2458864.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,737 | INFO     | -- intersect: -27454056380.97402
[2025-06-05 00:04:16] 2025-06-04 21:21:34,737 | INFO     | intersect: -27454056380.97402
[2025-06-05 00:04:16] 2025-06-04 21:21:34,737 | INFO     | chi2: 1.570657461313517
[2025-06-05 00:04:16] 2025-06-04 21:21:34,737 | INFO     | current chi2=1.570657461313517 (change=32.9109125138164 %)
[2025-06-05 00:04:16] 2025-06-04 21:21:34,738 | INFO     | sum of square deviations: 2126802667.5
[2025-06-05 00:04:16] 2025-06-04 21:21:34,739 | INFO     | sum of deviations: 34981193712.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,739 | INFO     | mean x: 1749065601.5
[2025-06-05 00:04:16] 2025-06-04 21:21:34,739 | INFO     | mean y: 2457881.136842105
[2025-06-05 00:04:16] 2025-06-04 21:21:34,739 | INFO     | -- intersect: -28765797658.521637
[2025-06-05 00:04:16] 2025-06-04 21:21:34,739 | INFO     | intersect: -28765797658.521637
[2025-06-05 00:04:16] 2025-06-04 21:21:34,740 | INFO     | chi2: 1.5715076230864007
[2025-06-05 00:04:16] 2025-06-04 21:21:34,740 | INFO     | current chi2=1.5715076230864007 (change=-0.05412776457145504 %)
[2025-06-05 00:04:16] 2025-06-04 21:21:34,740 | INFO     | right removable region: 189
[2025-06-05 00:04:16] 2025-06-04 21:21:34,740 | INFO     | sum of square deviations: 2299168690.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,742 | INFO     | sum of deviations: -8203831318.000001
[2025-06-05 00:04:16] 2025-06-04 21:21:34,742 | INFO     | mean x: 1749066059.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,742 | INFO     | mean y: 2475320.097435897
[2025-06-05 00:04:16] 2025-06-04 21:21:34,742 | INFO     | -- intersect: 6243445360.479744
[2025-06-05 00:04:16] 2025-06-04 21:21:34,742 | INFO     | intersect: 6243445360.479744
[2025-06-05 00:04:16] 2025-06-04 21:21:34,742 | INFO     | chi2: 0.8198531919107931
[2025-06-05 00:04:16] 2025-06-04 21:21:34,742 | INFO     | current chi2=0.8198531919107931 (change=64.98077787633483 %)
[2025-06-05 00:04:16] 2025-06-04 21:21:34,743 | INFO     | sum of square deviations: 2126802667.5
[2025-06-05 00:04:16] 2025-06-04 21:21:34,744 | INFO     | sum of deviations: -4985913568.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,744 | INFO     | mean x: 1749066211.5
[2025-06-05 00:04:16] 2025-06-04 21:21:34,744 | INFO     | mean y: 2472470.789473684
[2025-06-05 00:04:16] 2025-06-04 21:21:34,744 | INFO     | -- intersect: 4102849571.3594813
[2025-06-05 00:04:16] 2025-06-04 21:21:34,744 | INFO     | intersect: 4102849571.3594813
[2025-06-05 00:04:16] 2025-06-04 21:21:34,745 | INFO     | chi2: 0.7949102321941468
[2025-06-05 00:04:16] 2025-06-04 21:21:34,745 | INFO     | current chi2=0.7949102321941468 (change=3.042369043964189 %)
[2025-06-05 00:04:16] 2025-06-04 21:21:34,745 | INFO     | left removable region: 20
[2025-06-05 00:04:16] 2025-06-04 21:21:34,745 | INFO     | sum of square deviations: 1496660620.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,746 | INFO     | sum of deviations: 4819015860.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,746 | INFO     | mean x: 1749066181.0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,747 | INFO     | mean y: 2485716.1360946745
[2025-06-05 00:04:16] 2025-06-04 21:21:34,756 | INFO     | -- intersect: -5629237036.366494
[2025-06-05 00:04:16] 2025-06-04 21:21:34,756 | INFO     | intersect: -5629237036.366494
[2025-06-05 00:04:16] 2025-06-04 21:21:34,757 | INFO     | chi2: 0.0005329385956973614
[2025-06-05 00:04:16] 2025-06-04 21:21:34,757 | INFO     | -- intersect: -5629237036.366494
[2025-06-05 00:04:16] 2025-06-04 21:21:34,757 | INFO     | current memory leak: 3.22 B/s (using 169 data points, chi2=0.00)
[2025-06-05 00:04:16] 2025-06-04 21:21:34,758 | INFO     | ..............................
[2025-06-05 00:04:16] 2025-06-04 21:21:34,758 | INFO     | . Timing measurements:
[2025-06-05 00:04:16] 2025-06-04 21:21:34,758 | INFO     | . get job = 0 s
[2025-06-05 00:04:16] 2025-06-04 21:21:34,758 | INFO     | . initial setup = 2 s
[2025-06-05 00:04:16] 2025-06-04 21:21:34,758 | INFO     | . payload setup = 13 s
[2025-06-05 00:04:16] 2025-06-04 21:21:34,758 | INFO     | . stage-in = 0 s
[2025-06-05 00:04:16] 2025-06-04 21:21:34,758 | INFO     | . payload execution = 12184 s
[2025-06-05 00:04:16] 2025-06-04 21:21:34,758 | INFO     | . stage-out = 2 s
[2025-06-05 00:04:16] 2025-06-04 21:21:34,759 | INFO     | . log creation = 1 s
[2025-06-05 00:04:16] 2025-06-04 21:21:34,767 | INFO     | ..............................
[2025-06-05 00:04:16] 2025-06-04 21:21:34,886 | INFO     | 
[2025-06-05 00:04:16] 2025-06-04 21:21:34,886 | INFO     | job summary report
[2025-06-05 00:04:16] 2025-06-04 21:21:34,886 | INFO     | --------------------------------------------------
[2025-06-05 00:04:16] 2025-06-04 21:21:34,886 | INFO     | PanDA job id: 6678593021
[2025-06-05 00:04:16] 2025-06-04 21:21:34,886 | INFO     | task id: 45006595
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | errors: (none)
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | pilot state: finished 
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | transexitcode: 0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | exeerrorcode: 0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | exeerrordiag: 
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | exitcode: 0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | exitmsg: OK
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | cpuconsumptiontime: 46806 s
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | nevents: 400
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | neventsw: 0
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | pid: 3892
[2025-06-05 00:04:16] 2025-06-04 21:21:34,887 | INFO     | pgrp: 3892
[2025-06-05 00:04:16] 2025-06-04 21:21:34,888 | INFO     | corecount: 8
[2025-06-05 00:04:16] 2025-06-04 21:21:34,888 | INFO     | event service: False
[2025-06-05 00:04:16] 2025-06-04 21:21:34,888 | INFO     | sizes: {0: 2397115, 1: 2397314, 8: 2397520, 12: 2397548, 12201: 2426531, 12205: 2435472, 12208: 2435656, 12296: 2435826}
[2025-06-05 00:04:16] 2025-06-04 21:21:34,888 | INFO     | --------------------------------------------------
[2025-06-05 00:04:16] 2025-06-04 21:21:34,888 | INFO     | 
[2025-06-05 00:04:16] 2025-06-04 21:21:34,888 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 00:04:16] 2025-06-04 21:21:35,391 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,391 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,391 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,391 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:04:16] 2025-06-04 21:21:35,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,393 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:04:16] 2025-06-04 21:21:35,393 | INFO     | job 6678593021 has completed (purged errors)
[2025-06-05 00:04:16] 2025-06-04 21:21:35,393 | INFO     | overall cleanup function is called
[2025-06-05 00:04:16] 2025-06-04 21:21:35,661 | INFO     | PID=29536 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 00:04:16] 2025-06-04 21:21:35,661 | INFO     | .. there are 9 such processes running
[2025-06-05 00:04:16] 2025-06-04 21:21:36,402 | INFO     | --- collectZombieJob: --- 10, [3892]
[2025-06-05 00:04:16] 2025-06-04 21:21:36,402 | INFO     | zombie collector waiting for pid 3892
[2025-06-05 00:04:16] 2025-06-04 21:21:36,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:04:16] 2025-06-04 21:21:36,402 | INFO     | collected zombie processes
[2025-06-05 00:04:16] 2025-06-04 21:21:36,402 | INFO     | will attempt to kill all subprocesses of pid=3892
[2025-06-05 00:04:16] 2025-06-04 21:21:36,517 | INFO     | process IDs to be killed: [3892] (in reverse order)
[2025-06-05 00:04:16] 2025-06-04 21:21:37,374 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:04:16] 2025-06-04 21:21:37,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:04:16] 2025-06-04 21:21:37,378 | INFO     | did not find any defunct processes belonging to 3892
[2025-06-05 00:04:16] 2025-06-04 21:21:37,381 | INFO     | did not find any defunct processes belonging to 3892
[2025-06-05 00:04:16] 2025-06-04 21:21:37,381 | INFO     | ready for new job
[2025-06-05 00:04:16] 2025-06-04 21:21:37,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:04:16] 2025-06-04 21:21:37,383 | INFO     | **************************************
[2025-06-05 00:04:16] 2025-06-04 21:21:37,383 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:04:16] 2025-06-04 21:21:37,384 | INFO     | **************************************
[2025-06-05 00:04:16] 2025-06-04 21:21:37,384 | INFO     | 
[2025-06-05 00:04:16] 2025-06-04 21:21:37,384 | INFO     | pilot is running in a VM
[2025-06-05 00:04:16] 2025-06-04 21:21:37,384 | INFO     | architecture information:
[2025-06-05 00:04:16] 2025-06-04 21:21:37,386 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:04:16] 2025-06-04 21:21:37,604 | INFO     | cat /etc/os-release:
[2025-06-05 00:04:16] NAME="CentOS Linux"
[2025-06-05 00:04:16] VERSION="7 (Core)"
[2025-06-05 00:04:16] ID="centos"
[2025-06-05 00:04:16] ID_LIKE="rhel fedora"
[2025-06-05 00:04:16] VERSION_ID="7"
[2025-06-05 00:04:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:04:16] ANSI_COLOR="0;31"
[2025-06-05 00:04:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:04:16] HOME_URL="https://www.centos.org/"
[2025-06-05 00:04:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:04:16] 
[2025-06-05 00:04:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:04:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:04:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:04:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:04:16] 
[2025-06-05 00:04:16] 2025-06-04 21:21:37,605 | INFO     | **************************************
[2025-06-05 00:04:16] 2025-06-04 21:21:38,107 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 00:04:16] 2025-06-04 21:21:38,355 | INFO     | sufficient remaining disk space (497155047424 B)
[2025-06-05 00:04:16] 2025-06-04 21:21:38,355 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:04:16] 2025-06-04 21:21:38,355 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:04:16] 2025-06-04 21:21:38,356 | INFO     | update_server=False
[2025-06-05 00:04:16] 2025-06-04 21:21:38,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:04:16] 2025-06-04 21:21:38,357 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 00:04:16] 2025-06-04 21:21:38,357 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:04:16] 2025-06-04 21:21:38,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:04:16] 2025-06-04 21:21:38,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:04:16] 2025-06-04 21:21:38,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:04:16] 2025-06-04 21:21:38,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:04:16] 2025-06-04 21:21:38,937 | INFO     | all data control threads have been joined
[2025-06-05 00:04:16] 2025-06-04 21:21:39,048 | INFO     | all payload control threads have been joined
[2025-06-05 00:04:16] 2025-06-04 21:21:39,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:04:16] 2025-06-04 21:21:39,063 | INFO     | aborting loop
[2025-06-05 00:04:16] 2025-06-04 21:21:39,362 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:39,453 | INFO     | all job control threads have been joined
[2025-06-05 00:04:16] 2025-06-04 21:21:39,602 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:39,802 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:39,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:04:16] 2025-06-04 21:21:39,943 | INFO     | [data] control thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,054 | INFO     | [payload] control thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,069 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,075 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,370 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,459 | INFO     | [job] control thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,493 | INFO     | [job] validate thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,673 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,732 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,793 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,825 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:40,909 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:42,663 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:04:16] 2025-06-04 21:21:42,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440010360640)>', '<ExcThread(monitor, started 140439566927616)>']
[2025-06-05 00:04:16] 2025-06-04 21:21:43,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:04:16] 2025-06-04 21:21:43,389 | INFO     | [monitor] control thread has ended
[2025-06-05 00:04:16] 2025-06-04 21:21:47,947 | INFO     | all workflow threads have been joined
[2025-06-05 00:04:16] 2025-06-04 21:21:47,947 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:04:16] 2025-06-04 21:21:47,947 | INFO     | traces error code: 0
[2025-06-05 00:04:16] 2025-06-04 21:21:47,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:04:16] 2025-06-04 21:21:48,395 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:04:16] 2025-06-04 21:21:48,489 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:04:16] 2025-06-04 21:21:48,558 [wrapper] pilotpid: 29536
[2025-06-05 00:04:16] 2025-06-04 21:21:48,652 [wrapper] Pilot exit status: 0
[2025-06-05 00:04:16] 2025-06-04 21:21:48,977 [wrapper] pandaids: 6678593021
[2025-06-05 00:04:16] 2025-06-04 21:21:49,713 [wrapper] cleanup supervisor_pilot 15664 29537
[2025-06-05 00:04:16] 2025-06-04 21:21:49,808 [wrapper] Test setup, not cleaning
[2025-06-05 00:04:16] 2025-06-04 21:21:49,916 [wrapper] apfmon messages muted
[2025-06-05 00:04:16] 2025-06-04 21:21:50,013 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:04:16] 2025-06-04 21:21:50,104 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:04:16]  *** Error codes and diagnostics ***
[2025-06-05 00:04:16]     "exeErrorCode": 0,
[2025-06-05 00:04:16]     "exeErrorDiag": "",
[2025-06-05 00:04:16]     "pilotErrorCode": 0,
[2025-06-05 00:04:16]     "pilotErrorDiag": "",
[2025-06-05 00:04:16]  *** Listing of results directory ***
[2025-06-05 00:04:16] total 390460
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc    495897 Jun  4 09:34 pilot3.tar.gz
[2025-06-05 00:04:16] -rwx------. 1 boinc boinc     37140 Jun  4 09:46 runpilot2-wrapper.sh
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc      5111 Jun  4 09:46 queuedata.json
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc       100 Jun  4 19:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:04:16] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 19:56 run_atlas
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc       105 Jun  4 19:56 job.xml
[2025-06-05 00:04:16] -rw-r--r--. 2 boinc boinc 214682708 Jun  4 19:56 EVNT.45006593._000381.pool.root.1
[2025-06-05 00:04:16] -rw-r--r--. 2 boinc boinc     15093 Jun  4 19:56 start_atlas.sh
[2025-06-05 00:04:16] drwxrwx--x. 2 boinc boinc        68 Jun  4 19:56 shared
[2025-06-05 00:04:16] -rw-r--r--. 2 boinc boinc    508884 Jun  4 19:56 input.tar.gz
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc      6392 Jun  4 19:56 init_data.xml
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc         0 Jun  4 19:56 boinc_lockfile
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc      2522 Jun  4 19:56 pandaJob.out
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc    990984 Jun  4 19:56 agis_schedconf.cvmfs.json
[2025-06-05 00:04:16] drwx------. 4 boinc boinc      4096 Jun  4 19:56 pilot3
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc 178418211 Jun  4 23:18 HITS.45006595._055420.pool.root.1
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc       531 Jun  4 23:18 boinc_task_state.xml
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc      1018 Jun  4 23:19 memory_monitor_summary.json
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc   1598969 Jun  4 23:20 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc    381068 Jun  4 23:20 log.45006595._055420.job.log.tgz.1
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc        95 Jun  4 23:21 pilot_heartbeat.json
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc      7684 Jun  4 23:21 heartbeat.json
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc      4539 Jun  4 23:21 pilotlog.txt
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc   1072704 Jun  4 23:21 log.45006595._055420.job.log.1
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc       357 Jun  4 23:21 output.list
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc       620 Jun  4 23:21 runtime_log
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc   1474560 Jun  4 23:21 result.tar.gz
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc      8659 Jun  4 23:21 runtime_log.err
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc       656 Jun  4 23:21 LYVKDmH0xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQjnKDm6DFRGm.diag
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc        28 Jun  5 00:04 wrapper_checkpoint.txt
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc      8192 Jun  5 00:04 boinc_mmap_file
[2025-06-05 00:04:16] -rw-r--r--. 1 boinc boinc     20552 Jun  5 00:04 stderr.txt
[2025-06-05 00:04:16] HITS file was successfully produced:
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc 178418211 Jun  4 23:18 shared/HITS.pool.root.1
[2025-06-05 00:04:16]  *** Contents of shared directory: ***
[2025-06-05 00:04:16] total 385848
[2025-06-05 00:04:16] -rw-r--r--. 2 boinc boinc 214682708 Jun  4 19:56 ATLAS.root_0
[2025-06-05 00:04:16] -rw-r--r--. 2 boinc boinc     15093 Jun  4 19:56 start_atlas.sh
[2025-06-05 00:04:16] -rw-r--r--. 2 boinc boinc    508884 Jun  4 19:56 input.tar.gz
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc 178418211 Jun  4 23:18 HITS.pool.root.1
[2025-06-05 00:04:16] -rw-------. 1 boinc boinc   1474560 Jun  4 23:21 result.tar.gz
00:04:18 (25891): run_atlas exited; CPU time 46952.721040
00:04:18 (25891): called boinc_finish(0)

</stderr_txt>
]]>

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