Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:03:54 (30844): wrapper (7.7.26015): starting
06:03:54 (30844): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 06:03:54] Arguments: --nthreads 12
[2025-06-04 06:03:54] Threads: 12
[2025-06-04 06:03:54] Checking for CVMFS
[2025-06-04 06:03:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:03:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:03:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:03:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:03:55] 2.11.2.0 2984 35491 88608 146775 0 56 17131822 20275201 1 130560 0 15994806 99.983 6447083 7846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 06:03:55] CVMFS is ok
[2025-06-04 06:03:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:03:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:03:55] Further information can be found at the LHC@home message board.
[2025-06-04 06:03:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:03:55] Checking for apptainer binary...
[2025-06-04 06:03:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:03:55] Running /usr/bin/apptainer --version
[2025-06-04 06:03:55] apptainer version 1.3.2-1.el7
[2025-06-04 06:03:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:03:56] c-205-26.aglt2.org
[2025-06-04 06:03:56] apptainer works
[2025-06-04 06:03:56] Set ATHENA_PROC_NUMBER=12
[2025-06-04 06:03:56] Set ATHENA_CORE_NUMBER=12
[2025-06-04 06:03:56] Starting ATLAS job with PandaID=6678535748
[2025-06-04 06:03:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:08:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:08:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 07:08:18]  is_altstaged=None
[2025-06-04 07:08:18]  is_tar=False
[2025-06-04 07:08:18]  lfn=log.45006595._055392.job.log.tgz.1
[2025-06-04 07:08:18]  mtime=0
[2025-06-04 07:08:18]  protocol_id=None
[2025-06-04 07:08:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:08:18]  replicas=None
[2025-06-04 07:08:18]  scope=mc23_13p6TeV
[2025-06-04 07:08:18]  status=None
[2025-06-04 07:08:18]  status_code=0
[2025-06-04 07:08:18]  storage_token=
[2025-06-04 07:08:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678535748/log.45006595._055392.job.log.tgz.1
[2025-06-04 07:08:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/28/log.45006595._055392.job.log.tgz.1
[2025-06-04 07:08:18]  workdir=None
[2025-06-04 07:08:18] ]
[2025-06-04 07:08:18] 2025-06-04 11:07:56,670 | INFO     | transferring file log.45006595._055392.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678535748/log.45006595._055392.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:08:18] 2025-06-04 11:07:56,670 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678535748/log.45006595._055392.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055392.job
[2025-06-04 07:08:18] 2025-06-04 11:07:56,690 | INFO     | adding to output.list: log.45006595._055392.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/28/log.45006595._055392.job.log.tg
[2025-06-04 07:08:18] 2025-06-04 11:07:56,691 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:08:18] 2025-06-04 11:07:56,691 | INFO     | summary of transferred files:
[2025-06-04 07:08:18] 2025-06-04 11:07:56,692 | INFO     |  -- lfn=log.45006595._055392.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:08:18] 2025-06-04 11:07:56,692 | INFO     | stage-out finished correctly
[2025-06-04 07:08:18] 2025-06-04 11:07:56,778 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:08:18] 2025-06-04 11:07:57,176 | INFO     | monitor loop #288: job 0:6678535748 is in state 'finished'
[2025-06-04 07:08:18] 2025-06-04 11:07:57,176 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:08:18] 2025-06-04 11:07:58,325 | INFO     | job 6678535748 has state=finished
[2025-06-04 07:08:18] 2025-06-04 11:07:58,325 | INFO     | preparing for final server update for job 6678535748 in state='finished'
[2025-06-04 07:08:18] 2025-06-04 11:07:58,326 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:08:18] 2025-06-04 11:07:58,326 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:08:18] 2025-06-04 11:07:58,326 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:08:18] 2025-06-04 11:07:58,326 | INFO     | job 6678535748 has finished - writing final server update
[2025-06-04 07:08:18] 2025-06-04 11:07:58,327 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:08:18] 2025-06-04 11:07:58,328 | INFO     | executing command: lscpu
[2025-06-04 07:08:18] 2025-06-04 11:07:58,354 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:08:18] 2025-06-04 11:07:59,680 | INFO     | monitor loop #289: job 0:6678535748 is in state 'finished'
[2025-06-04 07:08:18] 2025-06-04 11:07:59,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:08:18] 2025-06-04 11:08:02,183 | INFO     | monitor loop #290: job 0:6678535748 is in state 'finished'
[2025-06-04 07:08:18] 2025-06-04 11:08:02,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:08:18] 2025-06-04 11:08:02,693 | INFO     | PID=2133 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 07:08:18] 2025-06-04 11:08:03,270 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 07:08:18] 2025-06-04 11:08:03,270 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678535748/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:08:18] 2025-06-04 11:08:03,271 | INFO     | extracted standard info from prmon json
[2025-06-04 07:08:18] 2025-06-04 11:08:03,272 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:08:18] 2025-06-04 11:08:03,272 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:08:18] 2025-06-04 11:08:03,273 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:08:18] 2025-06-04 11:08:03,273 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:08:18] 2025-06-04 11:08:03,275 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:08:18] 2025-06-04 11:08:03,275 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 07:08:18] 2025-06-04 11:08:03,276 | INFO     | sum of deviations: -2226503294.0
[2025-06-04 07:08:18] 2025-06-04 11:08:03,276 | INFO     | mean x: 1749033462.5
[2025-06-04 07:08:18] 2025-06-04 11:08:03,276 | INFO     | mean y: 2695402.214285714
[2025-06-04 07:08:18] 2025-06-04 11:08:03,276 | INFO     | -- intersect: 71537511386.72508
[2025-06-04 07:08:18] 2025-06-04 11:08:03,276 | INFO     | intersect: 71537511386.72508
[2025-06-04 07:08:18] 2025-06-04 11:08:03,276 | INFO     | chi2: 0.03741111692679231
[2025-06-04 07:08:18] 2025-06-04 11:08:03,276 | INFO     | -- intersect: 71537511386.72508
[2025-06-04 07:08:18] 2025-06-04 11:08:03,277 | INFO     | current memory leak: -40.90 B/s (using 56 data points, chi2=0.04)
[2025-06-04 07:08:18] 2025-06-04 11:08:03,277 | INFO     | ..............................
[2025-06-04 07:08:18] 2025-06-04 11:08:03,277 | INFO     | . Timing measurements:
[2025-06-04 07:08:18] 2025-06-04 11:08:03,277 | INFO     | . get job = 0 s
[2025-06-04 07:08:18] 2025-06-04 11:08:03,277 | INFO     | . initial setup = 2 s
[2025-06-04 07:08:18] 2025-06-04 11:08:03,277 | INFO     | . payload setup = 9 s
[2025-06-04 07:08:18] 2025-06-04 11:08:03,277 | INFO     | . stage-in = 0 s
[2025-06-04 07:08:18] 2025-06-04 11:08:03,277 | INFO     | . payload execution = 3797 s
[2025-06-04 07:08:18] 2025-06-04 11:08:03,278 | INFO     | . stage-out = 0 s
[2025-06-04 07:08:18] 2025-06-04 11:08:03,278 | INFO     | . log creation = 0 s
[2025-06-04 07:08:18] 2025-06-04 11:08:03,278 | INFO     | ..............................
[2025-06-04 07:08:18] 2025-06-04 11:08:03,361 | INFO     | 
[2025-06-04 07:08:18] 2025-06-04 11:08:03,361 | INFO     | job summary report
[2025-06-04 07:08:18] 2025-06-04 11:08:03,361 | INFO     | --------------------------------------------------
[2025-06-04 07:08:18] 2025-06-04 11:08:03,361 | INFO     | PanDA job id: 6678535748
[2025-06-04 07:08:18] 2025-06-04 11:08:03,361 | INFO     | task id: 45006595
[2025-06-04 07:08:18] 2025-06-04 11:08:03,362 | INFO     | errors: (none)
[2025-06-04 07:08:18] 2025-06-04 11:08:03,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:08:18] 2025-06-04 11:08:03,362 | INFO     | pilot state: finished 
[2025-06-04 07:08:18] 2025-06-04 11:08:03,362 | INFO     | transexitcode: 0
[2025-06-04 07:08:18] 2025-06-04 11:08:03,362 | INFO     | exeerrorcode: 0
[2025-06-04 07:08:18] 2025-06-04 11:08:03,362 | INFO     | exeerrordiag: 
[2025-06-04 07:08:18] 2025-06-04 11:08:03,362 | INFO     | exitcode: 0
[2025-06-04 07:08:18] 2025-06-04 11:08:03,363 | INFO     | exitmsg: OK
[2025-06-04 07:08:18] 2025-06-04 11:08:03,363 | INFO     | cpuconsumptiontime: 39559 s
[2025-06-04 07:08:18] 2025-06-04 11:08:03,363 | INFO     | nevents: 400
[2025-06-04 07:08:18] 2025-06-04 11:08:03,363 | INFO     | neventsw: 0
[2025-06-04 07:08:18] 2025-06-04 11:08:03,363 | INFO     | pid: 8633
[2025-06-04 07:08:18] 2025-06-04 11:08:03,363 | INFO     | pgrp: 8633
[2025-06-04 07:08:18] 2025-06-04 11:08:03,364 | INFO     | corecount: 12
[2025-06-04 07:08:18] 2025-06-04 11:08:03,364 | INFO     | event service: False
[2025-06-04 07:08:18] 2025-06-04 11:08:03,364 | INFO     | sizes: {0: 2405132, 1: 2405132, 5: 2405366, 11: 2405422, 3810: 2431044, 3811: 2440169, 3817: 2440283}
[2025-06-04 07:08:18] 2025-06-04 11:08:03,364 | INFO     | --------------------------------------------------
[2025-06-04 07:08:18] 2025-06-04 11:08:03,364 | INFO     | 
[2025-06-04 07:08:18] 2025-06-04 11:08:03,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:08:18] 2025-06-04 11:08:03,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,390 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:08:18] 2025-06-04 11:08:03,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,391 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:08:18] 2025-06-04 11:08:03,391 | INFO     | job 6678535748 has completed (purged errors)
[2025-06-04 07:08:18] 2025-06-04 11:08:03,391 | INFO     | overall cleanup function is called
[2025-06-04 07:08:18] 2025-06-04 11:08:04,398 | INFO     | --- collectZombieJob: --- 10, [8633]
[2025-06-04 07:08:18] 2025-06-04 11:08:04,399 | INFO     | zombie collector waiting for pid 8633
[2025-06-04 07:08:18] 2025-06-04 11:08:04,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:08:18] 2025-06-04 11:08:04,399 | INFO     | collected zombie processes
[2025-06-04 07:08:18] 2025-06-04 11:08:04,399 | INFO     | will attempt to kill all subprocesses of pid=8633
[2025-06-04 07:08:18] 2025-06-04 11:08:04,490 | INFO     | process IDs to be killed: [8633] (in reverse order)
[2025-06-04 07:08:18] 2025-06-04 11:08:04,538 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:08:18] 2025-06-04 11:08:04,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:08:18] 2025-06-04 11:08:04,542 | INFO     | did not find any defunct processes belonging to 8633
[2025-06-04 07:08:18] 2025-06-04 11:08:04,545 | INFO     | did not find any defunct processes belonging to 8633
[2025-06-04 07:08:18] 2025-06-04 11:08:04,545 | INFO     | ready for new job
[2025-06-04 07:08:18] 2025-06-04 11:08:04,546 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:08:18] 2025-06-04 11:08:04,546 | INFO     | **************************************
[2025-06-04 07:08:18] 2025-06-04 11:08:04,547 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:08:18] 2025-06-04 11:08:04,547 | INFO     | **************************************
[2025-06-04 07:08:18] 2025-06-04 11:08:04,547 | INFO     | 
[2025-06-04 07:08:18] 2025-06-04 11:08:04,547 | INFO     | architecture information:
[2025-06-04 07:08:18] 2025-06-04 11:08:04,548 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:08:18] 2025-06-04 11:08:04,563 | INFO     | cat /etc/os-release:
[2025-06-04 07:08:18] NAME="CentOS Linux"
[2025-06-04 07:08:18] VERSION="7 (Core)"
[2025-06-04 07:08:18] ID="centos"
[2025-06-04 07:08:18] ID_LIKE="rhel fedora"
[2025-06-04 07:08:18] VERSION_ID="7"
[2025-06-04 07:08:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:08:18] ANSI_COLOR="0;31"
[2025-06-04 07:08:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:08:18] HOME_URL="https://www.centos.org/"
[2025-06-04 07:08:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:08:18] 
[2025-06-04 07:08:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:08:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:08:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:08:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:08:18] 
[2025-06-04 07:08:18] 2025-06-04 11:08:04,563 | INFO     | **************************************
[2025-06-04 07:08:18] 2025-06-04 11:08:05,066 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:08:18] 2025-06-04 11:08:05,083 | INFO     | sufficient remaining disk space (29424091136 B)
[2025-06-04 07:08:18] 2025-06-04 11:08:05,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:08:18] 2025-06-04 11:08:05,083 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:08:18] 2025-06-04 11:08:05,083 | INFO     | update_server=False
[2025-06-04 07:08:18] 2025-06-04 11:08:05,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:08:18] 2025-06-04 11:08:05,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:08:18] 2025-06-04 11:08:05,084 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:08:18] 2025-06-04 11:08:05,085 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:08:18] 2025-06-04 11:08:05,085 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:08:18] 2025-06-04 11:08:05,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:08:18] 2025-06-04 11:08:05,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:08:18] 2025-06-04 11:08:05,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:08:18] 2025-06-04 11:08:05,692 | INFO     | aborting loop
[2025-06-04 07:08:18] 2025-06-04 11:08:05,745 | INFO     | all data control threads have been joined
[2025-06-04 07:08:18] 2025-06-04 11:08:06,086 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:06,089 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:06,109 | INFO     | all job control threads have been joined
[2025-06-04 07:08:18] 2025-06-04 11:08:06,176 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:06,201 | INFO     | all payload control threads have been joined
[2025-06-04 07:08:18] 2025-06-04 11:08:06,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:06,341 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:06,348 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:06,588 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:06,697 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:06,750 | INFO     | [data] control thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:06,974 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:06,997 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:07,091 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:07,115 | INFO     | [job] control thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:07,157 | INFO     | [job] validate thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:07,206 | INFO     | [payload] control thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:07,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:08:18] 2025-06-04 11:08:11,376 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:08:18] 2025-06-04 11:08:13,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194954012480)>', '<ExcThread(monitor, started 140194233706240)>']
[2025-06-04 07:08:18] 2025-06-04 11:08:14,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:08:18] 2025-06-04 11:08:14,122 | INFO     | [monitor] control thread has ended
[2025-06-04 07:08:18] 2025-06-04 11:08:18,175 | INFO     | all workflow threads have been joined
[2025-06-04 07:08:18] 2025-06-04 11:08:18,175 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:08:18] 2025-06-04 11:08:18,176 | INFO     | traces error code: 0
[2025-06-04 07:08:18] 2025-06-04 11:08:18,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:08:18] 2025-06-04 11:08:18,268 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:08:18] 2025-06-04 11:08:18,272 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:08:18] 2025-06-04 11:08:18,275 [wrapper] pilotpid: 2133
[2025-06-04 07:08:18] 2025-06-04 11:08:18,279 [wrapper] Pilot exit status: 0
[2025-06-04 07:08:18] 2025-06-04 11:08:18,295 [wrapper] pandaids: 6678535748
[2025-06-04 07:08:18] 2025-06-04 11:08:18,331 [wrapper] cleanup supervisor_pilot 17420 2134
[2025-06-04 07:08:18] 2025-06-04 11:08:18,335 [wrapper] Test setup, not cleaning
[2025-06-04 07:08:18] 2025-06-04 11:08:18,339 [wrapper] apfmon messages muted
[2025-06-04 07:08:18] 2025-06-04 11:08:18,343 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:08:18] 2025-06-04 11:08:18,347 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:08:18]  *** Error codes and diagnostics ***
[2025-06-04 07:08:18]     "exeErrorCode": 0,
[2025-06-04 07:08:18]     "exeErrorDiag": "",
[2025-06-04 07:08:18]     "pilotErrorCode": 0,
[2025-06-04 07:08:18]     "pilotErrorDiag": "",
[2025-06-04 07:08:18]  *** Listing of results directory ***
[2025-06-04 07:08:18] total 387268
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 07:08:18] -rwx------ 1 boincer umatlas     37140 Jun  4 03:46 runpilot2-wrapper.sh
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:46 queuedata.json
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas       100 Jun  4 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:08:18] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 06:03 run_atlas
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas       105 Jun  4 06:03 job.xml
[2025-06-04 07:08:18] -rw-r--r-- 2 boincer umatlas 215261491 Jun  4 06:03 EVNT.45006593._000762.pool.root.1
[2025-06-04 07:08:18] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:03 start_atlas.sh
[2025-06-04 07:08:18] drwxrwx--x 2 boincer umatlas      4096 Jun  4 06:03 shared
[2025-06-04 07:08:18] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 06:03 input.tar.gz
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas         0 Jun  4 06:03 boinc_lockfile
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 06:03 pandaJob.out
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas    986766 Jun  4 06:04 agis_schedconf.cvmfs.json
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas   1603667 Jun  4 06:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:08:18] drwx------ 4 boincer umatlas      4096 Jun  4 06:04 pilot3
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 07:02 init_data.xml
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas 176010538 Jun  4 07:07 HITS.45006595._055392.pool.root.1
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas       529 Jun  4 07:07 boinc_task_state.xml
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas      1050 Jun  4 07:07 memory_monitor_summary.json
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas    354759 Jun  4 07:07 log.45006595._055392.job.log.tgz.1
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas        95 Jun  4 07:07 pilot_heartbeat.json
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas      7748 Jun  4 07:08 heartbeat.json
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:08 boinc_mmap_file
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:08 wrapper_checkpoint.txt
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas      4476 Jun  4 07:08 pilotlog.txt
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas    376266 Jun  4 07:08 log.45006595._055392.job.log.1
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas       357 Jun  4 07:08 output.list
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:08 runtime_log
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas    747520 Jun  4 07:08 result.tar.gz
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas       659 Jun  4 07:08 sC7NDmG0xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0inKDmNulrGn.diag
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 07:08 runtime_log.err
[2025-06-04 07:08:18] -rw-r--r-- 1 boincer umatlas     21442 Jun  4 07:08 stderr.txt
[2025-06-04 07:08:18] HITS file was successfully produced:
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas 176010538 Jun  4 07:07 shared/HITS.pool.root.1
[2025-06-04 07:08:18]  *** Contents of shared directory: ***
[2025-06-04 07:08:18] total 383356
[2025-06-04 07:08:18] -rw-r--r-- 2 boincer umatlas 215261491 Jun  4 06:03 ATLAS.root_0
[2025-06-04 07:08:18] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 06:03 start_atlas.sh
[2025-06-04 07:08:18] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 06:03 input.tar.gz
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas 176010538 Jun  4 07:07 HITS.pool.root.1
[2025-06-04 07:08:18] -rw------- 1 boincer umatlas    747520 Jun  4 07:08 result.tar.gz
07:08:19 (30844): run_atlas exited; CPU time 39536.860828
07:08:19 (30844): called boinc_finish(0)

</stderr_txt>
]]>

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