Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:51:04 (2481787): wrapper (7.7.26015): starting
14:51:04 (2481787): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 14:51:04] Arguments: --nthreads 12
[2025-06-06 14:51:04] Threads: 12
[2025-06-06 14:51:04] Checking for CVMFS
[2025-06-06 14:51:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 14:51:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 14:51:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 14:51:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 14:51:06] 2.12.7.0 3695 2492 53612 146865 2 187 2207939 4096000 2692 130560 0 6835187 99.997 564729 130 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 14:51:06] CVMFS is ok
[2025-06-06 14:51:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 14:51:06] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 14:51:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 14:51:06] Further information can be found at the LHC@home message board.
[2025-06-06 14:51:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 14:51:06] Checking for apptainer binary...
[2025-06-06 14:51:06] apptainer is not installed, using version from CVMFS
[2025-06-06 14:51:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 14:51:06] dualxeon2
[2025-06-06 14:51:06] apptainer works
[2025-06-06 14:51:06] Set ATHENA_PROC_NUMBER=12
[2025-06-06 14:51:06] Set ATHENA_CORE_NUMBER=12
[2025-06-06 14:51:06] Starting ATLAS job with PandaID=6678313912
[2025-06-06 14:51:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 16:35:21]  *** The last 200 lines of the pilot log: ***
[2025-06-06 16:35:21] 2025-06-06 16:35:02,477 | INFO     | extracted standard info from prmon json
[2025-06-06 16:35:21] 2025-06-06 16:35:02,477 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 16:35:21] 2025-06-06 16:35:02,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 16:35:21] 2025-06-06 16:35:02,477 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 16:35:21] 2025-06-06 16:35:02,477 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 16:35:21] 2025-06-06 16:35:02,480 | INFO     | fitting pss+swap vs Time
[2025-06-06 16:35:21] 2025-06-06 16:35:02,480 | INFO     | sum of square deviations: 327366024.23999923
[2025-06-06 16:35:21] 2025-06-06 16:35:02,481 | INFO     | sum of deviations: 7103923319.360012
[2025-06-06 16:35:21] 2025-06-06 16:35:02,481 | INFO     | mean x: 1749224624.76
[2025-06-06 16:35:21] 2025-06-06 16:35:02,481 | INFO     | mean y: 2597679.39
[2025-06-06 16:35:21] 2025-06-06 16:35:02,481 | INFO     | -- intersect: -37956007314.75959
[2025-06-06 16:35:21] 2025-06-06 16:35:02,481 | INFO     | intersect: -37956007314.75959
[2025-06-06 16:35:21] 2025-06-06 16:35:02,481 | INFO     | chi2: 2.490176826913039
[2025-06-06 16:35:21] 2025-06-06 16:35:02,482 | INFO     | sum of square deviations: 281983372.8842101
[2025-06-06 16:35:21] 2025-06-06 16:35:02,482 | INFO     | sum of deviations: 13744071509.284214
[2025-06-06 16:35:21] 2025-06-06 16:35:02,482 | INFO     | mean x: 1749224470.2736843
[2025-06-06 16:35:21] 2025-06-06 16:35:02,483 | INFO     | mean y: 2619304.8736842107
[2025-06-06 16:35:21] 2025-06-06 16:35:02,483 | INFO     | -- intersect: -85255833912.87466
[2025-06-06 16:35:21] 2025-06-06 16:35:02,483 | INFO     | intersect: -85255833912.87466
[2025-06-06 16:35:21] 2025-06-06 16:35:02,483 | INFO     | chi2: 1.70752901402968
[2025-06-06 16:35:21] 2025-06-06 16:35:02,483 | INFO     | current chi2=1.70752901402968 (change=31.429407117789804 %)
[2025-06-06 16:35:21] 2025-06-06 16:35:02,484 | INFO     | sum of square deviations: 241018576.10000032
[2025-06-06 16:35:21] 2025-06-06 16:35:02,484 | INFO     | sum of deviations: 13069027376.399998
[2025-06-06 16:35:21] 2025-06-06 16:35:02,484 | INFO     | mean x: 1749224315.5666666
[2025-06-06 16:35:21] 2025-06-06 16:35:02,484 | INFO     | mean y: 2616755.2666666666
[2025-06-06 16:35:21] 2025-06-06 16:35:02,484 | INFO     | -- intersect: -94847584575.7721
[2025-06-06 16:35:21] 2025-06-06 16:35:02,485 | INFO     | intersect: -94847584575.7721
[2025-06-06 16:35:21] 2025-06-06 16:35:02,485 | INFO     | chi2: 1.7120949059519819
[2025-06-06 16:35:21] 2025-06-06 16:35:02,485 | INFO     | current chi2=1.7120949059519819 (change=-0.2673976187102483 %)
[2025-06-06 16:35:21] 2025-06-06 16:35:02,485 | INFO     | right removable region: 89
[2025-06-06 16:35:21] 2025-06-06 16:35:02,485 | INFO     | sum of square deviations: 279904797.9368414
[2025-06-06 16:35:21] 2025-06-06 16:35:02,486 | INFO     | sum of deviations: -11407577466.989473
[2025-06-06 16:35:21] 2025-06-06 16:35:02,486 | INFO     | mean x: 1749224782.7473683
[2025-06-06 16:35:21] 2025-06-06 16:35:02,486 | INFO     | mean y: 2658228.042105263
[2025-06-06 16:35:21] 2025-06-06 16:35:02,486 | INFO     | -- intersect: 71292673131.14859
[2025-06-06 16:35:21] 2025-06-06 16:35:02,486 | INFO     | intersect: 71292673131.14859
[2025-06-06 16:35:21] 2025-06-06 16:35:02,487 | INFO     | chi2: 0.8864866584793701
[2025-06-06 16:35:21] 2025-06-06 16:35:02,487 | INFO     | current chi2=0.8864866584793701 (change=64.4006542467786 %)
[2025-06-06 16:35:21] 2025-06-06 16:35:02,487 | INFO     | sum of square deviations: 236855902.32222214
[2025-06-06 16:35:21] 2025-06-06 16:35:02,488 | INFO     | sum of deviations: -10986692766.011108
[2025-06-06 16:35:21] 2025-06-06 16:35:02,488 | INFO     | mean x: 1749224941.3444445
[2025-06-06 16:35:21] 2025-06-06 16:35:02,488 | INFO     | mean y: 2656451.677777778
[2025-06-06 16:35:21] 2025-06-06 16:35:02,488 | INFO     | -- intersect: 81141428256.69914
[2025-06-06 16:35:21] 2025-06-06 16:35:02,488 | INFO     | intersect: 81141428256.69914
[2025-06-06 16:35:21] 2025-06-06 16:35:02,488 | INFO     | chi2: 0.8649341903577109
[2025-06-06 16:35:21] 2025-06-06 16:35:02,488 | INFO     | current chi2=0.8649341903577109 (change=2.4312230664169423 %)
[2025-06-06 16:35:21] 2025-06-06 16:35:02,489 | INFO     | left removable region: 20
[2025-06-06 16:35:21] 2025-06-06 16:35:02,489 | INFO     | sum of square deviations: 105537543.15942025
[2025-06-06 16:35:21] 2025-06-06 16:35:02,489 | INFO     | sum of deviations: -185925751.71014503
[2025-06-06 16:35:21] 2025-06-06 16:35:02,489 | INFO     | mean x: 1749224923.463768
[2025-06-06 16:35:21] 2025-06-06 16:35:02,489 | INFO     | mean y: 2664312.115942029
[2025-06-06 16:35:21] 2025-06-06 16:35:02,490 | INFO     | -- intersect: 3084278201.0601854
[2025-06-06 16:35:21] 2025-06-06 16:35:02,490 | INFO     | intersect: 3084278201.0601854
[2025-06-06 16:35:21] 2025-06-06 16:35:02,490 | INFO     | chi2: 0.010749237733711201
[2025-06-06 16:35:21] 2025-06-06 16:35:02,490 | INFO     | -- intersect: 3084278201.0601854
[2025-06-06 16:35:21] 2025-06-06 16:35:02,490 | INFO     | current memory leak: -1.76 B/s (using 69 data points, chi2=0.01)
[2025-06-06 16:35:21] 2025-06-06 16:35:02,491 | INFO     | ..............................
[2025-06-06 16:35:21] 2025-06-06 16:35:02,491 | INFO     | . Timing measurements:
[2025-06-06 16:35:21] 2025-06-06 16:35:02,491 | INFO     | . get job = 0 s
[2025-06-06 16:35:21] 2025-06-06 16:35:02,491 | INFO     | . initial setup = 2 s
[2025-06-06 16:35:21] 2025-06-06 16:35:02,491 | INFO     | . payload setup = 6 s
[2025-06-06 16:35:21] 2025-06-06 16:35:02,491 | INFO     | . stage-in = 0 s
[2025-06-06 16:35:21] 2025-06-06 16:35:02,491 | INFO     | . payload execution = 6193 s
[2025-06-06 16:35:21] 2025-06-06 16:35:02,491 | INFO     | . stage-out = 0 s
[2025-06-06 16:35:21] 2025-06-06 16:35:02,492 | INFO     | . log creation = 0 s
[2025-06-06 16:35:21] 2025-06-06 16:35:02,492 | INFO     | ..............................
[2025-06-06 16:35:21] 2025-06-06 16:35:02,602 | INFO     | 
[2025-06-06 16:35:21] 2025-06-06 16:35:02,603 | INFO     | job summary report
[2025-06-06 16:35:21] 2025-06-06 16:35:02,603 | INFO     | --------------------------------------------------
[2025-06-06 16:35:21] 2025-06-06 16:35:02,603 | INFO     | PanDA job id: 6678313912
[2025-06-06 16:35:21] 2025-06-06 16:35:02,603 | INFO     | task id: 45006595
[2025-06-06 16:35:21] 2025-06-06 16:35:02,603 | INFO     | errors: (none)
[2025-06-06 16:35:21] 2025-06-06 16:35:02,603 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 16:35:21] 2025-06-06 16:35:02,603 | INFO     | pilot state: finished 
[2025-06-06 16:35:21] 2025-06-06 16:35:02,603 | INFO     | transexitcode: 0
[2025-06-06 16:35:21] 2025-06-06 16:35:02,604 | INFO     | exeerrorcode: 0
[2025-06-06 16:35:21] 2025-06-06 16:35:02,604 | INFO     | exeerrordiag: 
[2025-06-06 16:35:21] 2025-06-06 16:35:02,604 | INFO     | exitcode: 0
[2025-06-06 16:35:21] 2025-06-06 16:35:02,604 | INFO     | exitmsg: OK
[2025-06-06 16:35:21] 2025-06-06 16:35:02,604 | INFO     | cpuconsumptiontime: 48746 s
[2025-06-06 16:35:21] 2025-06-06 16:35:02,604 | INFO     | nevents: 400
[2025-06-06 16:35:21] 2025-06-06 16:35:02,604 | INFO     | neventsw: 0
[2025-06-06 16:35:21] 2025-06-06 16:35:02,604 | INFO     | pid: 2492236
[2025-06-06 16:35:21] 2025-06-06 16:35:02,604 | INFO     | pgrp: 2492236
[2025-06-06 16:35:21] 2025-06-06 16:35:02,605 | INFO     | corecount: 12
[2025-06-06 16:35:21] 2025-06-06 16:35:02,605 | INFO     | event service: False
[2025-06-06 16:35:21] 2025-06-06 16:35:02,605 | INFO     | sizes: {0: 2397178, 1: 2397377, 4: 2397583, 11: 2397611, 6202: 2424110, 6203: 2433065, 6206: 2433277, 6212: 2433447}
[2025-06-06 16:35:21] 2025-06-06 16:35:02,605 | INFO     | --------------------------------------------------
[2025-06-06 16:35:21] 2025-06-06 16:35:02,605 | INFO     | 
[2025-06-06 16:35:21] 2025-06-06 16:35:02,605 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 16:35:21] 2025-06-06 16:35:02,624 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,626 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,626 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,626 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 16:35:21] 2025-06-06 16:35:02,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,626 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 16:35:21] 2025-06-06 16:35:02,626 | INFO     | job 6678313912 has completed (purged errors)
[2025-06-06 16:35:21] 2025-06-06 16:35:02,627 | INFO     | overall cleanup function is called
[2025-06-06 16:35:21] 2025-06-06 16:35:03,636 | INFO     | --- collectZombieJob: --- 10, [2492236]
[2025-06-06 16:35:21] 2025-06-06 16:35:03,636 | INFO     | zombie collector waiting for pid 2492236
[2025-06-06 16:35:21] 2025-06-06 16:35:03,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 16:35:21] 2025-06-06 16:35:03,636 | INFO     | collected zombie processes
[2025-06-06 16:35:21] 2025-06-06 16:35:03,636 | INFO     | will attempt to kill all subprocesses of pid=2492236
[2025-06-06 16:35:21] 2025-06-06 16:35:03,808 | INFO     | process IDs to be killed: [2492236] (in reverse order)
[2025-06-06 16:35:21] 2025-06-06 16:35:03,859 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 16:35:21] 2025-06-06 16:35:03,860 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 16:35:21] 2025-06-06 16:35:03,864 | INFO     | did not find any defunct processes belonging to 2492236
[2025-06-06 16:35:21] 2025-06-06 16:35:03,868 | INFO     | did not find any defunct processes belonging to 2492236
[2025-06-06 16:35:21] 2025-06-06 16:35:03,868 | INFO     | ready for new job
[2025-06-06 16:35:21] 2025-06-06 16:35:03,868 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 16:35:21] 2025-06-06 16:35:03,870 | INFO     | **************************************
[2025-06-06 16:35:21] 2025-06-06 16:35:03,870 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 16:35:21] 2025-06-06 16:35:03,870 | INFO     | **************************************
[2025-06-06 16:35:21] 2025-06-06 16:35:03,870 | INFO     | 
[2025-06-06 16:35:21] 2025-06-06 16:35:03,872 | INFO     | architecture information:
[2025-06-06 16:35:21] 2025-06-06 16:35:03,872 | INFO     | executing command: cat /etc/os-release
[2025-06-06 16:35:21] 2025-06-06 16:35:03,884 | INFO     | cat /etc/os-release:
[2025-06-06 16:35:21] NAME="CentOS Linux"
[2025-06-06 16:35:21] VERSION="7 (Core)"
[2025-06-06 16:35:21] ID="centos"
[2025-06-06 16:35:21] ID_LIKE="rhel fedora"
[2025-06-06 16:35:21] VERSION_ID="7"
[2025-06-06 16:35:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 16:35:21] ANSI_COLOR="0;31"
[2025-06-06 16:35:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 16:35:21] HOME_URL="https://www.centos.org/"
[2025-06-06 16:35:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 16:35:21] 
[2025-06-06 16:35:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 16:35:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 16:35:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 16:35:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 16:35:21] 
[2025-06-06 16:35:21] 2025-06-06 16:35:03,884 | INFO     | **************************************
[2025-06-06 16:35:21] 2025-06-06 16:35:04,385 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 16:35:21] 2025-06-06 16:35:04,400 | INFO     | sufficient remaining disk space (100476649472 B)
[2025-06-06 16:35:21] 2025-06-06 16:35:04,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 16:35:21] 2025-06-06 16:35:04,401 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 16:35:21] 2025-06-06 16:35:04,401 | INFO     | update_server=False
[2025-06-06 16:35:21] 2025-06-06 16:35:04,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 16:35:21] 2025-06-06 16:35:04,401 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 16:35:21] 2025-06-06 16:35:04,401 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 16:35:21] 2025-06-06 16:35:04,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 16:35:21] 2025-06-06 16:35:04,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 16:35:21] 2025-06-06 16:35:04,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:35:21] 2025-06-06 16:35:04,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:35:21] 2025-06-06 16:35:04,450 | INFO     | aborting loop
[2025-06-06 16:35:21] 2025-06-06 16:35:04,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 16:35:21] 2025-06-06 16:35:05,303 | INFO     | all data control threads have been joined
[2025-06-06 16:35:21] 2025-06-06 16:35:05,406 | INFO     | [job] retrieve thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:05,407 | INFO     | [job] queue monitor thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:05,453 | INFO     | [job] job monitor thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:05,538 | INFO     | [payload] validate_post thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:05,671 | INFO     | [payload] failed_post thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:05,699 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:05,798 | INFO     | all job control threads have been joined
[2025-06-06 16:35:21] 2025-06-06 16:35:05,897 | INFO     | all payload control threads have been joined
[2025-06-06 16:35:21] 2025-06-06 16:35:05,969 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:06,027 | INFO     | [data] copytool_in thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:06,273 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:06,309 | INFO     | [data] control thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:06,804 | INFO     | [job] control thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:06,813 | INFO     | [data] copytool_out thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:06,872 | INFO     | [job] validate thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:06,900 | INFO     | [payload] control thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:07,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 16:35:21] 2025-06-06 16:35:11,877 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:14,825 | INFO     | job.realtimelogging is not enabled
[2025-06-06 16:35:21] 2025-06-06 16:35:15,830 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 16:35:21] 2025-06-06 16:35:16,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123256215009088)>', '<ExcThread(monitor, started 123255671211776)>']
[2025-06-06 16:35:21] 2025-06-06 16:35:16,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 16:35:21] 2025-06-06 16:35:16,447 | INFO     | [monitor] control thread has ended
[2025-06-06 16:35:21] 2025-06-06 16:35:21,330 | INFO     | all workflow threads have been joined
[2025-06-06 16:35:21] 2025-06-06 16:35:21,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 16:35:21] 2025-06-06 16:35:21,330 | INFO     | traces error code: 0
[2025-06-06 16:35:21] 2025-06-06 16:35:21,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 16:35:21] 2025-06-06 16:35:21,448 [wrapper] ==== pilot stdout END ====
[2025-06-06 16:35:21] 2025-06-06 16:35:21,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 16:35:21] 2025-06-06 16:35:21,453 [wrapper] pilotpid: 2485538
[2025-06-06 16:35:21] 2025-06-06 16:35:21,455 [wrapper] Pilot exit status: 0
[2025-06-06 16:35:21] 2025-06-06 16:35:21,464 [wrapper] pandaids: 6678313912
[2025-06-06 16:35:21] 2025-06-06 16:35:21,497 [wrapper] cleanup supervisor_pilot 2559466 2485539
[2025-06-06 16:35:21] 2025-06-06 16:35:21,500 [wrapper] Test setup, not cleaning
[2025-06-06 16:35:21] 2025-06-06 16:35:21,503 [wrapper] apfmon messages muted
[2025-06-06 16:35:21] 2025-06-06 16:35:21,505 [wrapper] ==== wrapper stdout END ====
[2025-06-06 16:35:21] 2025-06-06 16:35:21,507 [wrapper] ==== wrapper stderr END ====
[2025-06-06 16:35:21]  *** Error codes and diagnostics ***
[2025-06-06 16:35:21]     "exeErrorCode": 0,
[2025-06-06 16:35:21]     "exeErrorDiag": "",
[2025-06-06 16:35:21]     "pilotErrorCode": 0,
[2025-06-06 16:35:21]     "pilotErrorDiag": "",
[2025-06-06 16:35:21]  *** Listing of results directory ***
[2025-06-06 16:35:21] total 392396
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-06 16:35:21] -rwx------ 1 boinc boinc     37140 Jun  4 05:01 runpilot2-wrapper.sh
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:01 queuedata.json
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc       100 Jun  6 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 16:35:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 14:51 run_atlas
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc       105 Jun  6 14:51 job.xml
[2025-06-06 16:35:21] -rw-r--r-- 2 boinc boinc 216354491 Jun  6 14:51 EVNT.45006593._002114.pool.root.1
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc      6557 Jun  6 14:51 init_data.xml
[2025-06-06 16:35:21] drwxrwx--x 2 boinc boinc      4096 Jun  6 14:51 shared
[2025-06-06 16:35:21] -rw-r--r-- 2 boinc boinc    508884 Jun  6 14:51 input.tar.gz
[2025-06-06 16:35:21] -rw-r--r-- 2 boinc boinc     15093 Jun  6 14:51 start_atlas.sh
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc         0 Jun  6 14:51 boinc_lockfile
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc      2525 Jun  6 14:51 pandaJob.out
[2025-06-06 16:35:21] -rw------- 1 boinc boinc    985728 Jun  6 14:51 agis_schedconf.cvmfs.json
[2025-06-06 16:35:21] -rw------- 1 boinc boinc   1598969 Jun  6 14:51 agis_ddmendpoints.agis.ALL.json
[2025-06-06 16:35:21] drwx------ 4 boinc boinc      4096 Jun  6 14:51 pilot3
[2025-06-06 16:35:21] -rw------- 1 boinc boinc 179746923 Jun  6 16:34 HITS.45006595._052797.pool.root.1
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc       529 Jun  6 16:34 boinc_task_state.xml
[2025-06-06 16:35:21] -rw------- 1 boinc boinc        96 Jun  6 16:34 pilot_heartbeat.json
[2025-06-06 16:35:21] -rw------- 1 boinc boinc      1036 Jun  6 16:34 memory_monitor_summary.json
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc        27 Jun  6 16:34 wrapper_checkpoint.txt
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc      8192 Jun  6 16:34 boinc_mmap_file
[2025-06-06 16:35:21] -rw------- 1 boinc boinc    383432 Jun  6 16:34 log.45006595._052797.job.log.tgz.1
[2025-06-06 16:35:21] -rw------- 1 boinc boinc      7670 Jun  6 16:35 heartbeat.json
[2025-06-06 16:35:21] -rw------- 1 boinc boinc      4556 Jun  6 16:35 pilotlog.txt
[2025-06-06 16:35:21] -rw------- 1 boinc boinc    560331 Jun  6 16:35 log.45006595._052797.job.log.1
[2025-06-06 16:35:21] -rw------- 1 boinc boinc       357 Jun  6 16:35 output.list
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc       620 Jun  6 16:35 runtime_log
[2025-06-06 16:35:21] -rw------- 1 boinc boinc    962560 Jun  6 16:35 result.tar.gz
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc      8726 Jun  6 16:35 runtime_log.err
[2025-06-06 16:35:21] -rw------- 1 boinc boinc       648 Jun  6 16:35 mV0MDmcQvg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkiaKDmC2sJUm.diag
[2025-06-06 16:35:21] -rw-r--r-- 1 boinc boinc     20953 Jun  6 16:35 stderr.txt
[2025-06-06 16:35:21] HITS file was successfully produced:
[2025-06-06 16:35:21] -rw------- 1 boinc boinc 179746923 Jun  6 16:34 shared/HITS.pool.root.1
[2025-06-06 16:35:21]  *** Contents of shared directory: ***
[2025-06-06 16:35:21] total 388280
[2025-06-06 16:35:21] -rw-r--r-- 2 boinc boinc 216354491 Jun  6 14:51 ATLAS.root_0
[2025-06-06 16:35:21] -rw-r--r-- 2 boinc boinc    508884 Jun  6 14:51 input.tar.gz
[2025-06-06 16:35:21] -rw-r--r-- 2 boinc boinc     15093 Jun  6 14:51 start_atlas.sh
[2025-06-06 16:35:21] -rw------- 1 boinc boinc 179746923 Jun  6 16:34 HITS.pool.root.1
[2025-06-06 16:35:21] -rw------- 1 boinc boinc    962560 Jun  6 16:35 result.tar.gz
16:35:23 (2481787): run_atlas exited; CPU time 48828.797756
16:35:23 (2481787): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN