Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:03:20 (897228): wrapper (7.7.26015): starting
06:03:20 (897228): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:03:20] Arguments: --nthreads 8
[2025-06-04 06:03:20] Threads: 8
[2025-06-04 06:03:20] Checking for CVMFS
[2025-06-04 06:03:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:03:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:03:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:03:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:03:20] 2.12.6.0 2340755 23373 458064 146775 3 401 22011834 32935936 13791 16776704 0 196258817 99.684 159712140 22165 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:03:20] CVMFS is ok
[2025-06-04 06:03:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:03:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:03:20] Further information can be found at the LHC@home message board.
[2025-06-04 06:03:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:03:20] Checking for apptainer binary...
[2025-06-04 06:03:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:03:20] Running /usr/bin/apptainer --version
[2025-06-04 06:03:20] apptainer version 1.4.1-1.el9
[2025-06-04 06:03:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:03:20] c7-7-35.aglt2.org
[2025-06-04 06:03:20] apptainer works
[2025-06-04 06:03:20] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:03:20] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:03:20] Starting ATLAS job with PandaID=6678313924
[2025-06-04 06:03:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:47:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:47:37]  protocol_id=None
[2025-06-04 06:47:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 06:47:37]  replicas=None
[2025-06-04 06:47:37]  scope=mc23_13p6TeV
[2025-06-04 06:47:37]  status=None
[2025-06-04 06:47:37]  status_code=0
[2025-06-04 06:47:37]  storage_token=
[2025-06-04 06:47:37]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678313924/log.45006595._052809.job.log.tgz.1
[2025-06-04 06:47:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/97/log.45006595._052809.job.log.tgz.1
[2025-06-04 06:47:37]  workdir=None
[2025-06-04 06:47:37] ]
[2025-06-04 06:47:37] 2025-06-04 10:47:12,945 | INFO     | transferring file log.45006595._052809.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678313924/log.45006595._052809.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 06:47:37] 2025-06-04 10:47:12,945 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678313924/log.45006595._052809.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._052809.job
[2025-06-04 06:47:37] 2025-06-04 10:47:12,961 | INFO     | adding to output.list: log.45006595._052809.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/97/log.45006595._052809.job.log.tg
[2025-06-04 06:47:37] 2025-06-04 10:47:12,961 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 06:47:37] 2025-06-04 10:47:12,961 | INFO     | summary of transferred files:
[2025-06-04 06:47:37] 2025-06-04 10:47:12,962 | INFO     |  -- lfn=log.45006595._052809.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 06:47:37] 2025-06-04 10:47:12,962 | INFO     | stage-out finished correctly
[2025-06-04 06:47:37] 2025-06-04 10:47:13,057 | WARNING  | process 909886 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 06:47:37] 2025-06-04 10:47:13,057 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678313924/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:47:37] 2025-06-04 10:47:13,346 | INFO     | number of running child processes to parent process 909886: 1
[2025-06-04 06:47:37] 2025-06-04 10:47:13,346 | INFO     | maximum number of monitored processes: 6
[2025-06-04 06:47:37] 2025-06-04 10:47:15,795 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 06:47:37] 2025-06-04 10:47:15,854 | INFO     | monitor loop #196: job 0:6678313924 is in state 'finished'
[2025-06-04 06:47:37] 2025-06-04 10:47:15,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:47:37] 2025-06-04 10:47:17,983 | INFO     | job 6678313924 has state=finished
[2025-06-04 06:47:37] 2025-06-04 10:47:17,984 | INFO     | preparing for final server update for job 6678313924 in state='finished'
[2025-06-04 06:47:37] 2025-06-04 10:47:17,984 | INFO     | this job has now completed (state=finished)
[2025-06-04 06:47:37] 2025-06-04 10:47:17,984 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 06:47:37] 2025-06-04 10:47:17,984 | INFO     | log transfer has been attempted: DONE
[2025-06-04 06:47:37] 2025-06-04 10:47:17,984 | INFO     | job 6678313924 has finished - writing final server update
[2025-06-04 06:47:37] 2025-06-04 10:47:17,985 | INFO     | total number of processed events: 400 (read)
[2025-06-04 06:47:37] 2025-06-04 10:47:18,002 | INFO     | executing command: lscpu
[2025-06-04 06:47:37] 2025-06-04 10:47:18,076 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 06:47:37] 2025-06-04 10:47:18,363 | INFO     | monitor loop #197: job 0:6678313924 is in state 'finished'
[2025-06-04 06:47:37] 2025-06-04 10:47:18,363 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:47:37] 2025-06-04 10:47:20,538 | INFO     | PID=900905 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 06:47:37] 2025-06-04 10:47:20,538 | INFO     | .. there are 29 such processes running
[2025-06-04 06:47:37] 2025-06-04 10:47:20,772 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 06:47:37] 2025-06-04 10:47:20,772 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678313924/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:47:37] 2025-06-04 10:47:20,773 | INFO     | extracted standard info from prmon json
[2025-06-04 06:47:37] 2025-06-04 10:47:20,773 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:47:37] 2025-06-04 10:47:20,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:47:37] 2025-06-04 10:47:20,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:47:37] 2025-06-04 10:47:20,773 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:47:37] 2025-06-04 10:47:20,774 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:47:37] 2025-06-04 10:47:20,774 | INFO     | sum of square deviations: 14456085.0
[2025-06-04 06:47:37] 2025-06-04 10:47:20,775 | INFO     | sum of deviations: 3246865879.5
[2025-06-04 06:47:37] 2025-06-04 10:47:20,775 | INFO     | mean x: 1749032803.5
[2025-06-04 06:47:37] 2025-06-04 10:47:20,775 | INFO     | mean y: 2121175.527777778
[2025-06-04 06:47:37] 2025-06-04 10:47:20,775 | INFO     | -- intersect: -392834177989.1754
[2025-06-04 06:47:37] 2025-06-04 10:47:20,775 | INFO     | intersect: -392834177989.1754
[2025-06-04 06:47:37] 2025-06-04 10:47:20,775 | INFO     | chi2: 0.5772840093453835
[2025-06-04 06:47:37] 2025-06-04 10:47:20,775 | INFO     | -- intersect: -392834177989.1754
[2025-06-04 06:47:37] 2025-06-04 10:47:20,775 | INFO     | current memory leak: 224.60 B/s (using 36 data points, chi2=0.58)
[2025-06-04 06:47:37] 2025-06-04 10:47:20,775 | INFO     | ..............................
[2025-06-04 06:47:37] 2025-06-04 10:47:20,776 | INFO     | . Timing measurements:
[2025-06-04 06:47:37] 2025-06-04 10:47:20,776 | INFO     | . get job = 0 s
[2025-06-04 06:47:37] 2025-06-04 10:47:20,776 | INFO     | . initial setup = 2 s
[2025-06-04 06:47:37] 2025-06-04 10:47:20,776 | INFO     | . payload setup = 4 s
[2025-06-04 06:47:37] 2025-06-04 10:47:20,776 | INFO     | . stage-in = 0 s
[2025-06-04 06:47:37] 2025-06-04 10:47:20,776 | INFO     | . payload execution = 2600 s
[2025-06-04 06:47:37] 2025-06-04 10:47:20,776 | INFO     | . stage-out = 0 s
[2025-06-04 06:47:37] 2025-06-04 10:47:20,776 | INFO     | . log creation = 0 s
[2025-06-04 06:47:37] 2025-06-04 10:47:20,776 | INFO     | ..............................
[2025-06-04 06:47:37] 2025-06-04 10:47:21,152 | INFO     | 
[2025-06-04 06:47:37] 2025-06-04 10:47:21,152 | INFO     | job summary report
[2025-06-04 06:47:37] 2025-06-04 10:47:21,152 | INFO     | --------------------------------------------------
[2025-06-04 06:47:37] 2025-06-04 10:47:21,152 | INFO     | PanDA job id: 6678313924
[2025-06-04 06:47:37] 2025-06-04 10:47:21,152 | INFO     | task id: 45006595
[2025-06-04 06:47:37] 2025-06-04 10:47:21,152 | INFO     | errors: (none)
[2025-06-04 06:47:37] 2025-06-04 10:47:21,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | pilot state: finished 
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | transexitcode: 0
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | exeerrorcode: 0
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | exeerrordiag: 
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | exitcode: 0
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | exitmsg: OK
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | cpuconsumptiontime: 16401 s
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | nevents: 400
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | neventsw: 0
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | pid: 909886
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | pgrp: 909886
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | corecount: 8
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | event service: False
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | sizes: {0: 2405184, 3: 2405390, 10: 2405418, 2609: 2430551, 2611: 2439492, 2614: 2439548, 2619: 2439846}
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | --------------------------------------------------
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | 
[2025-06-04 06:47:37] 2025-06-04 10:47:21,153 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 06:47:37] 2025-06-04 10:47:21,172 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,172 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,172 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,172 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | job 6678313924 has completed (purged errors)
[2025-06-04 06:47:37] 2025-06-04 10:47:21,173 | INFO     | overall cleanup function is called
[2025-06-04 06:47:37] 2025-06-04 10:47:22,181 | INFO     | --- collectZombieJob: --- 10, [909886]
[2025-06-04 06:47:37] 2025-06-04 10:47:22,181 | INFO     | zombie collector waiting for pid 909886
[2025-06-04 06:47:37] 2025-06-04 10:47:22,182 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:47:37] 2025-06-04 10:47:22,182 | INFO     | collected zombie processes
[2025-06-04 06:47:37] 2025-06-04 10:47:22,182 | INFO     | will attempt to kill all subprocesses of pid=909886
[2025-06-04 06:47:37] 2025-06-04 10:47:22,477 | INFO     | process IDs to be killed: [909886] (in reverse order)
[2025-06-04 06:47:37] 2025-06-04 10:47:22,579 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:47:37] 2025-06-04 10:47:22,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:47:37] 2025-06-04 10:47:22,594 | INFO     | did not find any defunct processes belonging to 909886
[2025-06-04 06:47:37] 2025-06-04 10:47:22,608 | INFO     | did not find any defunct processes belonging to 909886
[2025-06-04 06:47:37] 2025-06-04 10:47:22,608 | INFO     | ready for new job
[2025-06-04 06:47:37] 2025-06-04 10:47:22,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:47:37] 2025-06-04 10:47:22,610 | INFO     | **************************************
[2025-06-04 06:47:37] 2025-06-04 10:47:22,610 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:47:37] 2025-06-04 10:47:22,610 | INFO     | **************************************
[2025-06-04 06:47:37] 2025-06-04 10:47:22,610 | INFO     | 
[2025-06-04 06:47:37] 2025-06-04 10:47:22,626 | INFO     | architecture information:
[2025-06-04 06:47:37] 2025-06-04 10:47:22,626 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:47:37] 2025-06-04 10:47:22,640 | INFO     | cat /etc/os-release:
[2025-06-04 06:47:37] NAME="CentOS Linux"
[2025-06-04 06:47:37] VERSION="7 (Core)"
[2025-06-04 06:47:37] ID="centos"
[2025-06-04 06:47:37] ID_LIKE="rhel fedora"
[2025-06-04 06:47:37] VERSION_ID="7"
[2025-06-04 06:47:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:47:37] ANSI_COLOR="0;31"
[2025-06-04 06:47:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:47:37] HOME_URL="https://www.centos.org/"
[2025-06-04 06:47:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:47:37] 
[2025-06-04 06:47:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:47:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:47:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:47:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:47:37] 
[2025-06-04 06:47:37] 2025-06-04 10:47:22,640 | INFO     | **************************************
[2025-06-04 06:47:37] 2025-06-04 10:47:23,143 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 06:47:37] 2025-06-04 10:47:23,156 | INFO     | sufficient remaining disk space (75539415040 B)
[2025-06-04 06:47:37] 2025-06-04 10:47:23,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:47:37] 2025-06-04 10:47:23,156 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:47:37] 2025-06-04 10:47:23,156 | INFO     | update_server=False
[2025-06-04 06:47:37] 2025-06-04 10:47:23,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:47:37] 2025-06-04 10:47:23,157 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:47:37] 2025-06-04 10:47:23,158 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:47:37] 2025-06-04 10:47:23,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:47:37] 2025-06-04 10:47:23,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:47:37] 2025-06-04 10:47:23,251 | INFO     | all data control threads have been joined
[2025-06-04 06:47:37] 2025-06-04 10:47:23,369 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 06:47:37] 2025-06-04 10:47:23,370 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 06:47:37] 2025-06-04 10:47:23,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:47:37] 2025-06-04 10:47:23,370 | INFO     | will abort loop
[2025-06-04 06:47:37] 2025-06-04 10:47:23,396 | INFO     | all payload control threads have been joined
[2025-06-04 06:47:37] 2025-06-04 10:47:23,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:47:37] 2025-06-04 10:47:23,711 | INFO     | all job control threads have been joined
[2025-06-04 06:47:37] 2025-06-04 10:47:24,162 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:24,256 | INFO     | [data] control thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:24,375 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:24,402 | INFO     | [payload] control thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:24,414 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:24,717 | INFO     | [job] control thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:24,985 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:25,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:25,112 | INFO     | [job] validate thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:25,208 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:25,224 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:25,520 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:25,543 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:25,560 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:25,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:47:37] 2025-06-04 10:47:26,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:47:37] 2025-06-04 10:47:26,866 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:30,374 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:47:37] 2025-06-04 10:47:32,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395583096640)>', '<ExcThread(monitor, started 140394947925760)>']
[2025-06-04 06:47:37] 2025-06-04 10:47:33,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:47:37] 2025-06-04 10:47:33,202 | INFO     | [monitor] control thread has ended
[2025-06-04 06:47:37] 2025-06-04 10:47:37,383 | INFO     | all workflow threads have been joined
[2025-06-04 06:47:37] 2025-06-04 10:47:37,383 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:47:37] 2025-06-04 10:47:37,384 | INFO     | traces error code: 0
[2025-06-04 06:47:37] 2025-06-04 10:47:37,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:47:37] 2025-06-04 10:47:37,559 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:47:37] 2025-06-04 10:47:37,562 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:47:37] 2025-06-04 10:47:37,564 [wrapper] pilotpid: 900905
[2025-06-04 06:47:37] 2025-06-04 10:47:37,565 [wrapper] Pilot exit status: 0
[2025-06-04 06:47:37] 2025-06-04 10:47:37,572 [wrapper] pandaids: 6678313924
[2025-06-04 06:47:37] 2025-06-04 10:47:37,640 [wrapper] cleanup supervisor_pilot 1037393 900906
[2025-06-04 06:47:37] 2025-06-04 10:47:37,643 [wrapper] Test setup, not cleaning
[2025-06-04 06:47:37] 2025-06-04 10:47:37,645 [wrapper] apfmon messages muted
[2025-06-04 06:47:37] 2025-06-04 10:47:37,647 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:47:37] 2025-06-04 10:47:37,649 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:47:37]  *** Error codes and diagnostics ***
[2025-06-04 06:47:37]     "exeErrorCode": 0,
[2025-06-04 06:47:37]     "exeErrorDiag": "",
[2025-06-04 06:47:37]     "pilotErrorCode": 0,
[2025-06-04 06:47:37]     "pilotErrorDiag": "",
[2025-06-04 06:47:37]  *** Listing of results directory ***
[2025-06-04 06:47:37] total 387356
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:03 queuedata.json
[2025-06-04 06:47:37] -rwx------. 1 boincer umatlas     37140 Jun  4 01:04 runpilot2-wrapper.sh
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:47:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:03 run_atlas
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:03 job.xml
[2025-06-04 06:47:37] -rw-r--r--. 2 boincer umatlas 214319530 Jun  4 06:03 EVNT.45006593._002115.pool.root.1
[2025-06-04 06:47:37] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:03 start_atlas.sh
[2025-06-04 06:47:37] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:03 shared
[2025-06-04 06:47:37] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 06:03 input.tar.gz
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:03 boinc_lockfile
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 06:03 pandaJob.out
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas    986766 Jun  4 06:03 agis_schedconf.cvmfs.json
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:47:37] drwx------. 4 boincer umatlas      4096 Jun  4 06:03 pilot3
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 06:46 init_data.xml
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas 177380240 Jun  4 06:46 HITS.45006595._052809.pool.root.1
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas       529 Jun  4 06:46 boinc_task_state.xml
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas      1023 Jun  4 06:47 memory_monitor_summary.json
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas    275867 Jun  4 06:47 log.45006595._052809.job.log.tgz.1
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas      7675 Jun  4 06:47 heartbeat.json
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas        95 Jun  4 06:47 pilot_heartbeat.json
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas        27 Jun  4 06:47 wrapper_checkpoint.txt
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 06:47 boinc_mmap_file
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas      4662 Jun  4 06:47 pilotlog.txt
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas    283832 Jun  4 06:47 log.45006595._052809.job.log.1
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas       357 Jun  4 06:47 output.list
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas       620 Jun  4 06:47 runtime_log
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas    573440 Jun  4 06:47 result.tar.gz
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 06:47 runtime_log.err
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas       649 Jun  4 06:47 NwEMDmiTvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjHnKDmJh3Ztn.diag
[2025-06-04 06:47:37] -rw-r--r--. 1 boincer umatlas     21821 Jun  4 06:47 stderr.txt
[2025-06-04 06:47:37] HITS file was successfully produced:
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas 177380240 Jun  4 06:46 shared/HITS.pool.root.1
[2025-06-04 06:47:37]  *** Contents of shared directory: ***
[2025-06-04 06:47:37] total 383608
[2025-06-04 06:47:37] -rw-r--r--. 2 boincer umatlas 214319530 Jun  4 06:03 ATLAS.root_0
[2025-06-04 06:47:37] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:03 start_atlas.sh
[2025-06-04 06:47:37] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 06:03 input.tar.gz
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas 177380240 Jun  4 06:46 HITS.pool.root.1
[2025-06-04 06:47:37] -rw-------. 1 boincer umatlas    573440 Jun  4 06:47 result.tar.gz
06:47:39 (897228): run_atlas exited; CPU time 16471.831055
06:47:39 (897228): called boinc_finish(0)

</stderr_txt>
]]>

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