Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:21:54 (753175): wrapper (7.7.26015): starting
10:21:54 (753175): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 10:21:54] Arguments: --nthreads 12
[2025-06-05 10:21:54] Threads: 12
[2025-06-05 10:21:54] Checking for CVMFS
[2025-06-05 10:21:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:22:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:22:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:22:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:22:10] 2.12.7.0 3695 783 52056 146816 2 10 3469658 4096001 1824 130560 0 2072145 99.997 233905 209 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 10:22:10] CVMFS is ok
[2025-06-05 10:22:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:22:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 10:22:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 10:22:10] Further information can be found at the LHC@home message board.
[2025-06-05 10:22:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:22:10] Checking for apptainer binary...
[2025-06-05 10:22:10] apptainer is not installed, using version from CVMFS
[2025-06-05 10:22:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:22:10] dualxeon2
[2025-06-05 10:22:10] apptainer works
[2025-06-05 10:22:10] Set ATHENA_PROC_NUMBER=12
[2025-06-05 10:22:10] Set ATHENA_CORE_NUMBER=12
[2025-06-05 10:22:10] Starting ATLAS job with PandaID=6678313874
[2025-06-05 10:22:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:06:08]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:06:08] 2025-06-05 12:05:48,147 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/1/PanDA_Pilot-6678313874/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:06:08] 2025-06-05 12:05:48,147 | INFO     | extracted standard info from prmon json
[2025-06-05 12:06:08] 2025-06-05 12:05:48,148 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:06:08] 2025-06-05 12:05:48,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:06:08] 2025-06-05 12:05:48,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:06:08] 2025-06-05 12:05:48,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:06:08] 2025-06-05 12:05:48,151 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:06:08] 2025-06-05 12:05:48,151 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,152 | INFO     | sum of deviations: 15965289599.000004
[2025-06-05 12:06:08] 2025-06-05 12:05:48,152 | INFO     | mean x: 1749122030.0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,152 | INFO     | mean y: 2658591.5544554456
[2025-06-05 12:06:08] 2025-06-05 12:05:48,152 | INFO     | -- intersect: -87414551300.26598
[2025-06-05 12:06:08] 2025-06-05 12:05:48,152 | INFO     | intersect: -87414551300.26598
[2025-06-05 12:06:08] 2025-06-05 12:05:48,152 | INFO     | chi2: 1.6911731281245446
[2025-06-05 12:06:08] 2025-06-05 12:05:48,153 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,153 | INFO     | sum of deviations: 15634476533.999992
[2025-06-05 12:06:08] 2025-06-05 12:05:48,153 | INFO     | mean x: 1749121877.5
[2025-06-05 12:06:08] 2025-06-05 12:05:48,154 | INFO     | mean y: 2657473.8333333335
[2025-06-05 12:06:08] 2025-06-05 12:05:48,154 | INFO     | -- intersect: -99688909012.10889
[2025-06-05 12:06:08] 2025-06-05 12:05:48,154 | INFO     | intersect: -99688909012.10889
[2025-06-05 12:06:08] 2025-06-05 12:05:48,154 | INFO     | chi2: 1.691455461389895
[2025-06-05 12:06:08] 2025-06-05 12:05:48,154 | INFO     | current chi2=1.691455461389895 (change=-0.016694521729046223 %)
[2025-06-05 12:06:08] 2025-06-05 12:05:48,154 | INFO     | right removable region: 95
[2025-06-05 12:06:08] 2025-06-05 12:05:48,155 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,155 | INFO     | sum of deviations: -2909117358.4999995
[2025-06-05 12:06:08] 2025-06-05 12:05:48,155 | INFO     | mean x: 1749122182.5
[2025-06-05 12:06:08] 2025-06-05 12:05:48,155 | INFO     | mean y: 2721238.2604166665
[2025-06-05 12:06:08] 2025-06-05 12:05:48,155 | INFO     | -- intersect: 18552399988.321312
[2025-06-05 12:06:08] 2025-06-05 12:05:48,156 | INFO     | intersect: 18552399988.321312
[2025-06-05 12:06:08] 2025-06-05 12:05:48,156 | INFO     | chi2: 0.0386837279635911
[2025-06-05 12:06:08] 2025-06-05 12:05:48,156 | INFO     | current chi2=0.0386837279635911 (change=97.7126098256723 %)
[2025-06-05 12:06:08] 2025-06-05 12:05:48,156 | INFO     | sum of square deviations: 233641590.0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,157 | INFO     | sum of deviations: -4078488731.0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,157 | INFO     | mean x: 1749122335.0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,157 | INFO     | mean y: 2725445.175824176
[2025-06-05 12:06:08] 2025-06-05 12:05:48,157 | INFO     | -- intersect: 30535712883.062664
[2025-06-05 12:06:08] 2025-06-05 12:05:48,157 | INFO     | intersect: 30535712883.062664
[2025-06-05 12:06:08] 2025-06-05 12:05:48,157 | INFO     | chi2: 0.011377656403337141
[2025-06-05 12:06:08] 2025-06-05 12:05:48,158 | INFO     | current chi2=0.011377656403337141 (change=70.58800430494773 %)
[2025-06-05 12:06:08] 2025-06-05 12:05:48,158 | INFO     | sum of square deviations: 197203697.5
[2025-06-05 12:06:08] 2025-06-05 12:05:48,158 | INFO     | sum of deviations: -4014123635.5
[2025-06-05 12:06:08] 2025-06-05 12:05:48,158 | INFO     | mean x: 1749122487.5
[2025-06-05 12:06:08] 2025-06-05 12:05:48,159 | INFO     | mean y: 2725159.430232558
[2025-06-05 12:06:08] 2025-06-05 12:05:48,159 | INFO     | -- intersect: 35606489224.03811
[2025-06-05 12:06:08] 2025-06-05 12:05:48,159 | INFO     | intersect: 35606489224.03811
[2025-06-05 12:06:08] 2025-06-05 12:05:48,159 | INFO     | chi2: 0.009899580627683677
[2025-06-05 12:06:08] 2025-06-05 12:05:48,159 | INFO     | current chi2=0.009899580627683677 (change=12.991038956141571 %)
[2025-06-05 12:06:08] 2025-06-05 12:05:48,159 | INFO     | left removable region: 30
[2025-06-05 12:06:08] 2025-06-05 12:05:48,159 | INFO     | sum of square deviations: 85136480.0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,160 | INFO     | sum of deviations: -2603495006.0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,160 | INFO     | mean x: 1749122762.0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,160 | INFO     | mean y: 2724102.1692307694
[2025-06-05 12:06:08] 2025-06-05 12:05:48,160 | INFO     | -- intersect: 53491338803.50439
[2025-06-05 12:06:08] 2025-06-05 12:05:48,160 | INFO     | intersect: 53491338803.50439
[2025-06-05 12:06:08] 2025-06-05 12:05:48,160 | INFO     | chi2: 0.007458694706838586
[2025-06-05 12:06:08] 2025-06-05 12:05:48,161 | INFO     | -- intersect: 53491338803.50439
[2025-06-05 12:06:08] 2025-06-05 12:05:48,161 | INFO     | current memory leak: -30.58 B/s (using 65 data points, chi2=0.01)
[2025-06-05 12:06:08] 2025-06-05 12:05:48,161 | INFO     | ..............................
[2025-06-05 12:06:08] 2025-06-05 12:05:48,161 | INFO     | . Timing measurements:
[2025-06-05 12:06:08] 2025-06-05 12:05:48,161 | INFO     | . get job = 0 s
[2025-06-05 12:06:08] 2025-06-05 12:05:48,162 | INFO     | . initial setup = 2 s
[2025-06-05 12:06:08] 2025-06-05 12:05:48,162 | INFO     | . payload setup = 6 s
[2025-06-05 12:06:08] 2025-06-05 12:05:48,162 | INFO     | . stage-in = 0 s
[2025-06-05 12:06:08] 2025-06-05 12:05:48,162 | INFO     | . payload execution = 6163 s
[2025-06-05 12:06:08] 2025-06-05 12:05:48,162 | INFO     | . stage-out = 0 s
[2025-06-05 12:06:08] 2025-06-05 12:05:48,162 | INFO     | . log creation = 0 s
[2025-06-05 12:06:08] 2025-06-05 12:05:48,162 | INFO     | ..............................
[2025-06-05 12:06:08] 2025-06-05 12:05:48,273 | INFO     | 
[2025-06-05 12:06:08] 2025-06-05 12:05:48,273 | INFO     | job summary report
[2025-06-05 12:06:08] 2025-06-05 12:05:48,273 | INFO     | --------------------------------------------------
[2025-06-05 12:06:08] 2025-06-05 12:05:48,273 | INFO     | PanDA job id: 6678313874
[2025-06-05 12:06:08] 2025-06-05 12:05:48,273 | INFO     | task id: 45006595
[2025-06-05 12:06:08] 2025-06-05 12:05:48,274 | INFO     | errors: (none)
[2025-06-05 12:06:08] 2025-06-05 12:05:48,274 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:06:08] 2025-06-05 12:05:48,274 | INFO     | pilot state: finished 
[2025-06-05 12:06:08] 2025-06-05 12:05:48,274 | INFO     | transexitcode: 0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,274 | INFO     | exeerrorcode: 0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,274 | INFO     | exeerrordiag: 
[2025-06-05 12:06:08] 2025-06-05 12:05:48,274 | INFO     | exitcode: 0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,274 | INFO     | exitmsg: OK
[2025-06-05 12:06:08] 2025-06-05 12:05:48,274 | INFO     | cpuconsumptiontime: 46857 s
[2025-06-05 12:06:08] 2025-06-05 12:05:48,275 | INFO     | nevents: 400
[2025-06-05 12:06:08] 2025-06-05 12:05:48,275 | INFO     | neventsw: 0
[2025-06-05 12:06:08] 2025-06-05 12:05:48,275 | INFO     | pid: 774225
[2025-06-05 12:06:08] 2025-06-05 12:05:48,275 | INFO     | pgrp: 774225
[2025-06-05 12:06:08] 2025-06-05 12:05:48,275 | INFO     | corecount: 12
[2025-06-05 12:06:08] 2025-06-05 12:05:48,275 | INFO     | event service: False
[2025-06-05 12:06:08] 2025-06-05 12:05:48,275 | INFO     | sizes: {0: 2397194, 1: 2397393, 5: 2397599, 11: 2397655, 6173: 2424194, 6174: 2424193, 6175: 2433420, 6179: 2433534}
[2025-06-05 12:06:08] 2025-06-05 12:05:48,275 | INFO     | --------------------------------------------------
[2025-06-05 12:06:08] 2025-06-05 12:05:48,275 | INFO     | 
[2025-06-05 12:06:08] 2025-06-05 12:05:48,276 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/1
[2025-06-05 12:06:08] 2025-06-05 12:05:48,295 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,296 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,296 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,297 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,297 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:06:08] 2025-06-05 12:05:48,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,298 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:06:08] 2025-06-05 12:05:48,298 | INFO     | job 6678313874 has completed (purged errors)
[2025-06-05 12:06:08] 2025-06-05 12:05:48,298 | INFO     | overall cleanup function is called
[2025-06-05 12:06:08] 2025-06-05 12:05:49,306 | INFO     | --- collectZombieJob: --- 10, [774225]
[2025-06-05 12:06:08] 2025-06-05 12:05:49,306 | INFO     | zombie collector waiting for pid 774225
[2025-06-05 12:06:08] 2025-06-05 12:05:49,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:06:08] 2025-06-05 12:05:49,306 | INFO     | collected zombie processes
[2025-06-05 12:06:08] 2025-06-05 12:05:49,306 | INFO     | will attempt to kill all subprocesses of pid=774225
[2025-06-05 12:06:08] 2025-06-05 12:05:49,483 | INFO     | process IDs to be killed: [774225] (in reverse order)
[2025-06-05 12:06:08] 2025-06-05 12:05:49,540 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:06:08] 2025-06-05 12:05:49,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:06:08] 2025-06-05 12:05:49,544 | INFO     | did not find any defunct processes belonging to 774225
[2025-06-05 12:06:08] 2025-06-05 12:05:49,548 | INFO     | did not find any defunct processes belonging to 774225
[2025-06-05 12:06:08] 2025-06-05 12:05:49,548 | INFO     | ready for new job
[2025-06-05 12:06:08] 2025-06-05 12:05:49,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:06:08] 2025-06-05 12:05:49,550 | INFO     | **************************************
[2025-06-05 12:06:08] 2025-06-05 12:05:49,550 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:06:08] 2025-06-05 12:05:49,550 | INFO     | **************************************
[2025-06-05 12:06:08] 2025-06-05 12:05:49,550 | INFO     | 
[2025-06-05 12:06:08] 2025-06-05 12:05:49,552 | INFO     | architecture information:
[2025-06-05 12:06:08] 2025-06-05 12:05:49,552 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:06:08] 2025-06-05 12:05:49,565 | INFO     | cat /etc/os-release:
[2025-06-05 12:06:08] NAME="CentOS Linux"
[2025-06-05 12:06:08] VERSION="7 (Core)"
[2025-06-05 12:06:08] ID="centos"
[2025-06-05 12:06:08] ID_LIKE="rhel fedora"
[2025-06-05 12:06:08] VERSION_ID="7"
[2025-06-05 12:06:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:06:08] ANSI_COLOR="0;31"
[2025-06-05 12:06:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:06:08] HOME_URL="https://www.centos.org/"
[2025-06-05 12:06:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:06:08] 
[2025-06-05 12:06:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:06:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:06:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:06:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:06:08] 
[2025-06-05 12:06:08] 2025-06-05 12:05:49,565 | INFO     | **************************************
[2025-06-05 12:06:08] 2025-06-05 12:05:50,068 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/1
[2025-06-05 12:06:08] 2025-06-05 12:05:50,082 | INFO     | sufficient remaining disk space (84699774976 B)
[2025-06-05 12:06:08] 2025-06-05 12:05:50,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:06:08] 2025-06-05 12:05:50,083 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:06:08] 2025-06-05 12:05:50,083 | INFO     | update_server=False
[2025-06-05 12:06:08] 2025-06-05 12:05:50,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:06:08] 2025-06-05 12:05:50,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:06:08] 2025-06-05 12:05:50,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:06:08] 2025-06-05 12:05:50,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:06:08] 2025-06-05 12:05:50,419 | INFO     | all job control threads have been joined
[2025-06-05 12:06:08] 2025-06-05 12:05:50,523 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:06:08] 2025-06-05 12:05:50,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:06:08] 2025-06-05 12:05:50,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:06:08] 2025-06-05 12:05:50,746 | INFO     | all data control threads have been joined
[2025-06-05 12:06:08] 2025-06-05 12:05:51,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:06:08] 2025-06-05 12:05:51,048 | INFO     | aborting loop
[2025-06-05 12:06:08] 2025-06-05 12:05:51,089 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:51,089 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:51,119 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:51,221 | INFO     | all payload control threads have been joined
[2025-06-05 12:06:08] 2025-06-05 12:05:51,424 | INFO     | [job] control thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:51,484 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:51,675 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:51,751 | INFO     | [data] control thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:51,869 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:51,872 | INFO     | [job] validate thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:52,053 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:52,089 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:52,212 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:52,226 | INFO     | [payload] control thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:52,327 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:05:54,086 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:06:00,943 | INFO     | job.realtimelogging is not enabled
[2025-06-05 12:06:08] 2025-06-05 12:06:01,947 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:06:08] 2025-06-05 12:06:03,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133424398018368)>', '<ExcThread(monitor, started 133423687526144)>']
[2025-06-05 12:06:08] 2025-06-05 12:06:03,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:06:08] 2025-06-05 12:06:03,576 | INFO     | [monitor] control thread has ended
[2025-06-05 12:06:08] 2025-06-05 12:06:08,156 | INFO     | all workflow threads have been joined
[2025-06-05 12:06:08] 2025-06-05 12:06:08,157 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:06:08] 2025-06-05 12:06:08,157 | INFO     | traces error code: 0
[2025-06-05 12:06:08] 2025-06-05 12:06:08,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:06:08] 2025-06-05 12:06:08,278 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:06:08] 2025-06-05 12:06:08,281 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:06:08] 2025-06-05 12:06:08,283 [wrapper] pilotpid: 760839
[2025-06-05 12:06:08] 2025-06-05 12:06:08,286 [wrapper] Pilot exit status: 0
[2025-06-05 12:06:08] 2025-06-05 12:06:08,296 [wrapper] pandaids: 6678313874
[2025-06-05 12:06:08] 2025-06-05 12:06:08,329 [wrapper] cleanup supervisor_pilot  844664 760840
[2025-06-05 12:06:08] 2025-06-05 12:06:08,332 [wrapper] Test setup, not cleaning
[2025-06-05 12:06:08] 2025-06-05 12:06:08,335 [wrapper] apfmon messages muted
[2025-06-05 12:06:08] 2025-06-05 12:06:08,337 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:06:08] 2025-06-05 12:06:08,340 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:06:08]  *** Error codes and diagnostics ***
[2025-06-05 12:06:08]     "exeErrorCode": 0,
[2025-06-05 12:06:08]     "exeErrorDiag": "",
[2025-06-05 12:06:08]     "pilotErrorCode": 0,
[2025-06-05 12:06:08]     "pilotErrorDiag": "",
[2025-06-05 12:06:08]  *** Listing of results directory ***
[2025-06-05 12:06:08] total 392388
[2025-06-05 12:06:08] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:58 pilot3.tar.gz
[2025-06-05 12:06:08] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:03 queuedata.json
[2025-06-05 12:06:08] -rwx------ 1 boinc boinc     37140 Jun  4 05:04 runpilot2-wrapper.sh
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc       100 Jun  5 10:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:06:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 10:21 run_atlas
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc       105 Jun  5 10:21 job.xml
[2025-06-05 12:06:08] -rw-r--r-- 2 boinc boinc 216757635 Jun  5 10:21 EVNT.45006593._002113.pool.root.1
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc      6589 Jun  5 10:21 init_data.xml
[2025-06-05 12:06:08] drwxrwx--x 2 boinc boinc      4096 Jun  5 10:21 shared
[2025-06-05 12:06:08] -rw-r--r-- 2 boinc boinc    508882 Jun  5 10:21 input.tar.gz
[2025-06-05 12:06:08] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:21 start_atlas.sh
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc         0 Jun  5 10:21 boinc_lockfile
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 10:22 pandaJob.out
[2025-06-05 12:06:08] -rw------- 1 boinc boinc    982836 Jun  5 10:22 agis_schedconf.cvmfs.json
[2025-06-05 12:06:08] -rw------- 1 boinc boinc   1598969 Jun  5 10:22 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:06:08] drwx------ 4 boinc boinc      4096 Jun  5 10:22 pilot3
[2025-06-05 12:06:08] -rw------- 1 boinc boinc 179269165 Jun  5 12:05 HITS.45006595._052759.pool.root.1
[2025-06-05 12:06:08] -rw------- 1 boinc boinc      1021 Jun  5 12:05 memory_monitor_summary.json
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 12:05 boinc_mmap_file
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc        27 Jun  5 12:05 wrapper_checkpoint.txt
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc       529 Jun  5 12:05 boinc_task_state.xml
[2025-06-05 12:06:08] -rw------- 1 boinc boinc    370959 Jun  5 12:05 log.45006595._052759.job.log.tgz.1
[2025-06-05 12:06:08] -rw------- 1 boinc boinc        95 Jun  5 12:05 pilot_heartbeat.json
[2025-06-05 12:06:08] -rw------- 1 boinc boinc      7670 Jun  5 12:05 heartbeat.json
[2025-06-05 12:06:08] -rw------- 1 boinc boinc      4448 Jun  5 12:06 pilotlog.txt
[2025-06-05 12:06:08] -rw------- 1 boinc boinc    603233 Jun  5 12:06 log.45006595._052759.job.log.1
[2025-06-05 12:06:08] -rw------- 1 boinc boinc       357 Jun  5 12:06 output.list
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc       620 Jun  5 12:06 runtime_log
[2025-06-05 12:06:08] -rw------- 1 boinc boinc    993280 Jun  5 12:06 result.tar.gz
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc      8968 Jun  5 12:06 runtime_log.err
[2025-06-05 12:06:08] -rw------- 1 boinc boinc       653 Jun  5 12:06 PPrLDmiTvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQHnKDmbYDa9m.diag
[2025-06-05 12:06:08] -rw-rw-r-- 1 boinc boinc     20962 Jun  5 12:06 stderr.txt
[2025-06-05 12:06:08] HITS file was successfully produced:
[2025-06-05 12:06:08] -rw------- 1 boinc boinc 179269165 Jun  5 12:05 shared/HITS.pool.root.1
[2025-06-05 12:06:08]  *** Contents of shared directory: ***
[2025-06-05 12:06:08] total 388244
[2025-06-05 12:06:08] -rw-r--r-- 2 boinc boinc 216757635 Jun  5 10:21 ATLAS.root_0
[2025-06-05 12:06:08] -rw-r--r-- 2 boinc boinc    508882 Jun  5 10:21 input.tar.gz
[2025-06-05 12:06:08] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:21 start_atlas.sh
[2025-06-05 12:06:08] -rw------- 1 boinc boinc 179269165 Jun  5 12:05 HITS.pool.root.1
[2025-06-05 12:06:08] -rw------- 1 boinc boinc    993280 Jun  5 12:06 result.tar.gz
12:06:09 (753175): run_atlas exited; CPU time 46916.086332
12:06:09 (753175): called boinc_finish(0)

</stderr_txt>
]]>

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