Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:52:12 (2091170): wrapper (7.7.26015): starting
06:52:12 (2091170): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 06:52:12] Arguments: --nthreads 12
[2025-06-04 06:52:12] Threads: 12
[2025-06-04 06:52:12] Checking for CVMFS
[2025-06-04 06:52:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:52:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:52:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:52:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:52:12] 2.12.6.0 5554 725 127188 146777 3 211 25239964 32935936 8328 16776704 0 4993027 99.553 4568621 34909 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 06:52:12] CVMFS is ok
[2025-06-04 06:52:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:52:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:52:12] Further information can be found at the LHC@home message board.
[2025-06-04 06:52:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:52:12] Checking for apptainer binary...
[2025-06-04 06:52:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:52:12] Running /usr/bin/apptainer --version
[2025-06-04 06:52:12] apptainer version 1.4.1-1.el9
[2025-06-04 06:52:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:52:12] c6-1-26-2.aglt2.org
[2025-06-04 06:52:12] apptainer works
[2025-06-04 06:52:12] Set ATHENA_PROC_NUMBER=12
[2025-06-04 06:52:12] Set ATHENA_CORE_NUMBER=12
[2025-06-04 06:52:12] Starting ATLAS job with PandaID=6678313895
[2025-06-04 06:52:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:42:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:42:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 07:42:55]  is_altstaged=None
[2025-06-04 07:42:55]  is_tar=False
[2025-06-04 07:42:55]  lfn=log.45006595._052780.job.log.tgz.1
[2025-06-04 07:42:55]  mtime=0
[2025-06-04 07:42:55]  protocol_id=None
[2025-06-04 07:42:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:42:55]  replicas=None
[2025-06-04 07:42:55]  scope=mc23_13p6TeV
[2025-06-04 07:42:55]  status=None
[2025-06-04 07:42:55]  status_code=0
[2025-06-04 07:42:55]  storage_token=
[2025-06-04 07:42:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678313895/log.45006595._052780.job.log.tgz.1
[2025-06-04 07:42:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/83/log.45006595._052780.job.log.tgz.1
[2025-06-04 07:42:55]  workdir=None
[2025-06-04 07:42:55] ]
[2025-06-04 07:42:55] 2025-06-04 11:42:31,587 | INFO     | transferring file log.45006595._052780.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678313895/log.45006595._052780.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:42:55] 2025-06-04 11:42:31,587 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678313895/log.45006595._052780.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052780.job
[2025-06-04 07:42:55] 2025-06-04 11:42:31,604 | INFO     | adding to output.list: log.45006595._052780.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/83/log.45006595._052780.job.log.tg
[2025-06-04 07:42:55] 2025-06-04 11:42:31,605 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:42:55] 2025-06-04 11:42:31,605 | INFO     | summary of transferred files:
[2025-06-04 07:42:55] 2025-06-04 11:42:31,605 | INFO     |  -- lfn=log.45006595._052780.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:42:55] 2025-06-04 11:42:31,605 | INFO     | stage-out finished correctly
[2025-06-04 07:42:55] 2025-06-04 11:42:31,685 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:42:55] 2025-06-04 11:42:31,846 | INFO     | job 6678313895 has state=finished
[2025-06-04 07:42:55] 2025-06-04 11:42:31,846 | INFO     | preparing for final server update for job 6678313895 in state='finished'
[2025-06-04 07:42:55] 2025-06-04 11:42:31,847 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:42:55] 2025-06-04 11:42:31,847 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:42:55] 2025-06-04 11:42:31,847 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:42:55] 2025-06-04 11:42:31,847 | INFO     | job 6678313895 has finished - writing final server update
[2025-06-04 07:42:55] 2025-06-04 11:42:31,847 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:42:55] 2025-06-04 11:42:31,863 | INFO     | executing command: lscpu
[2025-06-04 07:42:55] 2025-06-04 11:42:31,931 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:42:55] 2025-06-04 11:42:33,702 | WARNING  | process 2101798 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:42:55] 2025-06-04 11:42:33,703 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678313895/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:42:55] 2025-06-04 11:42:33,891 | INFO     | number of running child processes to parent process 2101798: 1
[2025-06-04 07:42:55] 2025-06-04 11:42:33,891 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:42:55] 2025-06-04 11:42:35,382 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 07:42:55] 2025-06-04 11:42:35,382 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678313895/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:42:55] 2025-06-04 11:42:35,383 | INFO     | extracted standard info from prmon json
[2025-06-04 07:42:55] 2025-06-04 11:42:35,383 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:42:55] 2025-06-04 11:42:35,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:42:55] 2025-06-04 11:42:35,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:42:55] 2025-06-04 11:42:35,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:42:55] 2025-06-04 11:42:35,386 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:42:55] 2025-06-04 11:42:35,387 | INFO     | sum of square deviations: 22960430.5
[2025-06-04 07:42:55] 2025-06-04 11:42:35,388 | INFO     | sum of deviations: 3760416095.5
[2025-06-04 07:42:55] 2025-06-04 11:42:35,388 | INFO     | mean x: 1749035920.5
[2025-06-04 07:42:55] 2025-06-04 11:42:35,388 | INFO     | mean y: 2330899.880952381
[2025-06-04 07:42:55] 2025-06-04 11:42:35,388 | INFO     | -- intersect: -286451480454.2162
[2025-06-04 07:42:55] 2025-06-04 11:42:35,388 | INFO     | intersect: -286451480454.2162
[2025-06-04 07:42:55] 2025-06-04 11:42:35,388 | INFO     | chi2: 0.6996759076749418
[2025-06-04 07:42:55] 2025-06-04 11:42:35,389 | INFO     | -- intersect: -286451480454.2162
[2025-06-04 07:42:55] 2025-06-04 11:42:35,389 | INFO     | current memory leak: 163.78 B/s (using 42 data points, chi2=0.70)
[2025-06-04 07:42:55] 2025-06-04 11:42:35,389 | INFO     | ..............................
[2025-06-04 07:42:55] 2025-06-04 11:42:35,390 | INFO     | . Timing measurements:
[2025-06-04 07:42:55] 2025-06-04 11:42:35,390 | INFO     | . get job = 0 s
[2025-06-04 07:42:55] 2025-06-04 11:42:35,390 | INFO     | . initial setup = 2 s
[2025-06-04 07:42:55] 2025-06-04 11:42:35,390 | INFO     | . payload setup = 5 s
[2025-06-04 07:42:55] 2025-06-04 11:42:35,390 | INFO     | . stage-in = 0 s
[2025-06-04 07:42:55] 2025-06-04 11:42:35,390 | INFO     | . payload execution = 2985 s
[2025-06-04 07:42:55] 2025-06-04 11:42:35,391 | INFO     | . stage-out = 0 s
[2025-06-04 07:42:55] 2025-06-04 11:42:35,391 | INFO     | . log creation = 0 s
[2025-06-04 07:42:55] 2025-06-04 11:42:35,391 | INFO     | ..............................
[2025-06-04 07:42:55] 2025-06-04 11:42:35,442 | INFO     | 
[2025-06-04 07:42:55] 2025-06-04 11:42:35,442 | INFO     | job summary report
[2025-06-04 07:42:55] 2025-06-04 11:42:35,442 | INFO     | --------------------------------------------------
[2025-06-04 07:42:55] 2025-06-04 11:42:35,442 | INFO     | PanDA job id: 6678313895
[2025-06-04 07:42:55] 2025-06-04 11:42:35,442 | INFO     | task id: 45006595
[2025-06-04 07:42:55] 2025-06-04 11:42:35,442 | INFO     | errors: (none)
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | pilot state: finished 
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | transexitcode: 0
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | exeerrorcode: 0
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | exeerrordiag: 
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | exitcode: 0
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | exitmsg: OK
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | cpuconsumptiontime: 28282 s
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | nevents: 400
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | neventsw: 0
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | pid: 2101798
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | pgrp: 2101798
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | corecount: 12
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | event service: False
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | sizes: {0: 2405182, 4: 2405388, 11: 2405416, 2995: 2430795, 2996: 2439792, 3000: 2439906}
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | --------------------------------------------------
[2025-06-04 07:42:55] 2025-06-04 11:42:35,443 | INFO     | 
[2025-06-04 07:42:55] 2025-06-04 11:42:35,444 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:42:55] 2025-06-04 11:42:35,459 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,459 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,459 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,459 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,459 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,459 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,459 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | job 6678313895 has completed (purged errors)
[2025-06-04 07:42:55] 2025-06-04 11:42:35,460 | INFO     | overall cleanup function is called
[2025-06-04 07:42:55] 2025-06-04 11:42:36,468 | INFO     | --- collectZombieJob: --- 10, [2101798]
[2025-06-04 07:42:55] 2025-06-04 11:42:36,469 | INFO     | zombie collector waiting for pid 2101798
[2025-06-04 07:42:55] 2025-06-04 11:42:36,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:42:55] 2025-06-04 11:42:36,469 | INFO     | collected zombie processes
[2025-06-04 07:42:55] 2025-06-04 11:42:36,470 | INFO     | will attempt to kill all subprocesses of pid=2101798
[2025-06-04 07:42:55] 2025-06-04 11:42:36,813 | INFO     | PID=2094793 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 07:42:55] 2025-06-04 11:42:36,813 | INFO     | .. there are 8 such processes running
[2025-06-04 07:42:55] 2025-06-04 11:42:36,908 | INFO     | process IDs to be killed: [2101798] (in reverse order)
[2025-06-04 07:42:55] 2025-06-04 11:42:36,987 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:42:55] 2025-06-04 11:42:36,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:42:55] 2025-06-04 11:42:36,996 | INFO     | did not find any defunct processes belonging to 2101798
[2025-06-04 07:42:55] 2025-06-04 11:42:37,004 | INFO     | did not find any defunct processes belonging to 2101798
[2025-06-04 07:42:55] 2025-06-04 11:42:37,004 | INFO     | ready for new job
[2025-06-04 07:42:55] 2025-06-04 11:42:37,005 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:42:55] 2025-06-04 11:42:37,007 | INFO     | **************************************
[2025-06-04 07:42:55] 2025-06-04 11:42:37,007 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:42:55] 2025-06-04 11:42:37,007 | INFO     | **************************************
[2025-06-04 07:42:55] 2025-06-04 11:42:37,007 | INFO     | 
[2025-06-04 07:42:55] 2025-06-04 11:42:37,022 | INFO     | architecture information:
[2025-06-04 07:42:55] 2025-06-04 11:42:37,022 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:42:55] 2025-06-04 11:42:37,036 | INFO     | cat /etc/os-release:
[2025-06-04 07:42:55] NAME="CentOS Linux"
[2025-06-04 07:42:55] VERSION="7 (Core)"
[2025-06-04 07:42:55] ID="centos"
[2025-06-04 07:42:55] ID_LIKE="rhel fedora"
[2025-06-04 07:42:55] VERSION_ID="7"
[2025-06-04 07:42:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:42:55] ANSI_COLOR="0;31"
[2025-06-04 07:42:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:42:55] HOME_URL="https://www.centos.org/"
[2025-06-04 07:42:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:42:55] 
[2025-06-04 07:42:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:42:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:42:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:42:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:42:55] 
[2025-06-04 07:42:55] 2025-06-04 11:42:37,036 | INFO     | **************************************
[2025-06-04 07:42:55] 2025-06-04 11:42:37,540 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:42:55] 2025-06-04 11:42:37,554 | INFO     | sufficient remaining disk space (76298584064 B)
[2025-06-04 07:42:55] 2025-06-04 11:42:37,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:42:55] 2025-06-04 11:42:37,555 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:42:55] 2025-06-04 11:42:37,555 | INFO     | update_server=False
[2025-06-04 07:42:55] 2025-06-04 11:42:37,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:42:55] 2025-06-04 11:42:37,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:42:55] 2025-06-04 11:42:37,556 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:42:55] 2025-06-04 11:42:37,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:42:55] 2025-06-04 11:42:37,556 | INFO     | aborting loop
[2025-06-04 07:42:55] 2025-06-04 11:42:37,556 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:42:55] 2025-06-04 11:42:37,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:42:55] 2025-06-04 11:42:37,557 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:42:55] 2025-06-04 11:42:37,692 | INFO     | all data control threads have been joined
[2025-06-04 07:42:55] 2025-06-04 11:42:37,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:42:55] 2025-06-04 11:42:37,990 | INFO     | all payload control threads have been joined
[2025-06-04 07:42:55] 2025-06-04 11:42:38,421 | INFO     | all job control threads have been joined
[2025-06-04 07:42:55] 2025-06-04 11:42:38,561 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:38,562 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:38,590 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:38,697 | INFO     | [data] control thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:38,834 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:38,995 | INFO     | [payload] control thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:39,339 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:39,396 | INFO     | [job] validate thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:39,426 | INFO     | [job] control thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:39,562 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:39,686 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:39,786 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:39,886 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:40,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:42:55] 2025-06-04 11:42:41,457 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:41,775 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:48,320 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:42:55] 2025-06-04 11:42:49,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:42:55] 2025-06-04 11:42:50,353 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140254032328512)>', '<ExcThread(monitor, started 140253088179968)>']
[2025-06-04 07:42:55] 2025-06-04 11:42:50,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:42:55] 2025-06-04 11:42:50,622 | INFO     | [monitor] control thread has ended
[2025-06-04 07:42:55] 2025-06-04 11:42:55,378 | INFO     | all workflow threads have been joined
[2025-06-04 07:42:55] 2025-06-04 11:42:55,378 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:42:55] 2025-06-04 11:42:55,378 | INFO     | traces error code: 0
[2025-06-04 07:42:55] 2025-06-04 11:42:55,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:42:55] 2025-06-04 11:42:55,547 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:42:55] 2025-06-04 11:42:55,550 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:42:55] 2025-06-04 11:42:55,552 [wrapper] pilotpid: 2094793
[2025-06-04 07:42:55] 2025-06-04 11:42:55,554 [wrapper] Pilot exit status: 0
[2025-06-04 07:42:55] 2025-06-04 11:42:55,563 [wrapper] pandaids: 6678313895
[2025-06-04 07:42:55] 2025-06-04 11:42:55,610 [wrapper] cleanup supervisor_pilot 2183803 2094794
[2025-06-04 07:42:55] 2025-06-04 11:42:55,613 [wrapper] Test setup, not cleaning
[2025-06-04 07:42:55] 2025-06-04 11:42:55,615 [wrapper] apfmon messages muted
[2025-06-04 07:42:55] 2025-06-04 11:42:55,618 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:42:55] 2025-06-04 11:42:55,621 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:42:55]  *** Error codes and diagnostics ***
[2025-06-04 07:42:55]     "exeErrorCode": 0,
[2025-06-04 07:42:55]     "exeErrorDiag": "",
[2025-06-04 07:42:55]     "pilotErrorCode": 0,
[2025-06-04 07:42:55]     "pilotErrorDiag": "",
[2025-06-04 07:42:55]  *** Listing of results directory ***
[2025-06-04 07:42:55] total 390532
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:58 pilot3.tar.gz
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 01:03 queuedata.json
[2025-06-04 07:42:55] -rwx------. 1 boincer umatlas     37140 Jun  4 01:04 runpilot2-wrapper.sh
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas       100 Jun  4 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:42:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 06:52 run_atlas
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas       105 Jun  4 06:52 job.xml
[2025-06-04 07:42:55] -rw-r--r--. 2 boincer umatlas 216354491 Jun  4 06:52 EVNT.45006593._002114.pool.root.1
[2025-06-04 07:42:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:52 start_atlas.sh
[2025-06-04 07:42:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 06:52 shared
[2025-06-04 07:42:55] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 06:52 input.tar.gz
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas         0 Jun  4 06:52 boinc_lockfile
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 06:52 pandaJob.out
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas    986812 Jun  4 06:52 agis_schedconf.cvmfs.json
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas   1603667 Jun  4 06:52 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:42:55] drwx------. 4 boincer umatlas      4096 Jun  4 06:52 pilot3
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 07:39 init_data.xml
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas        95 Jun  4 07:42 pilot_heartbeat.json
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas 178409117 Jun  4 07:42 HITS.45006595._052780.pool.root.1
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:42 boinc_task_state.xml
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas      1028 Jun  4 07:42 memory_monitor_summary.json
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas    336662 Jun  4 07:42 log.45006595._052780.job.log.tgz.1
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:42 boinc_mmap_file
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:42 wrapper_checkpoint.txt
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas      7706 Jun  4 07:42 heartbeat.json
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas      4548 Jun  4 07:42 pilotlog.txt
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas    319028 Jun  4 07:42 log.45006595._052780.job.log.1
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas       357 Jun  4 07:42 output.list
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:42 runtime_log
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas    675840 Jun  4 07:42 result.tar.gz
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 07:42 runtime_log.err
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas       652 Jun  4 07:42 hgVKDmuTvg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3HnKDmMYLMun.diag
[2025-06-04 07:42:55] -rw-r--r--. 1 boincer umatlas     21413 Jun  4 07:42 stderr.txt
[2025-06-04 07:42:55] HITS file was successfully produced:
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas 178409117 Jun  4 07:42 shared/HITS.pool.root.1
[2025-06-04 07:42:55]  *** Contents of shared directory: ***
[2025-06-04 07:42:55] total 386692
[2025-06-04 07:42:55] -rw-r--r--. 2 boincer umatlas 216354491 Jun  4 06:52 ATLAS.root_0
[2025-06-04 07:42:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 06:52 start_atlas.sh
[2025-06-04 07:42:55] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 06:52 input.tar.gz
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas 178409117 Jun  4 07:42 HITS.pool.root.1
[2025-06-04 07:42:55] -rw-------. 1 boincer umatlas    675840 Jun  4 07:42 result.tar.gz
07:42:57 (2091170): run_atlas exited; CPU time 28330.403373
07:42:57 (2091170): called boinc_finish(0)

</stderr_txt>
]]>

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