Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:07:05 (2710953): wrapper (7.7.26015): starting
03:07:05 (2710953): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 03:07:05] Arguments: --nthreads 12
[2025-06-04 03:07:05] Threads: 12
[2025-06-04 03:07:05] Checking for CVMFS
[2025-06-04 03:07:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:07:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:07:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:07:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:07:06] 2.11.5.0 2764546 23490 375308 146775 3 805 43464039 45568000 19681 130560 0 185241685 99.802 97382228 21266 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-04 03:07:06] CVMFS is ok
[2025-06-04 03:07:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:07:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:07:06] Further information can be found at the LHC@home message board.
[2025-06-04 03:07:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:07:06] Checking for apptainer binary...
[2025-06-04 03:07:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:07:06] Running /usr/bin/apptainer --version
[2025-06-04 03:07:06] apptainer version 1.4.0-1.el9
[2025-06-04 03:07:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:07:06] wns0159.triumf.lcg
[2025-06-04 03:07:06] apptainer works
[2025-06-04 03:07:06] Set ATHENA_PROC_NUMBER=12
[2025-06-04 03:07:06] Set ATHENA_CORE_NUMBER=12
[2025-06-04 03:07:06] Starting ATLAS job with PandaID=6678392062
[2025-06-04 03:07:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:10:20]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:10:20] 2025-06-04 10:10:06,495 | INFO     | extracted standard info from prmon json
[2025-06-04 03:10:20] 2025-06-04 10:10:06,495 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:10:20] 2025-06-04 10:10:06,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:10:20] 2025-06-04 10:10:06,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:10:20] 2025-06-04 10:10:06,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:10:20] 2025-06-04 10:10:06,497 | WARNING  | found no stored workdir sizes
[2025-06-04 03:10:20] 2025-06-04 10:10:06,497 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 03:10:20] 2025-06-04 10:10:06,499 | WARNING  | wrong length of table data, x=[1749031667.0], y=[1823.0] (must be same and length>=4)
[2025-06-04 03:10:20] 2025-06-04 10:10:06,499 | INFO     | ..............................
[2025-06-04 03:10:20] 2025-06-04 10:10:06,499 | INFO     | . Timing measurements:
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . get job = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . initial setup = 3 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . payload setup = 7 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . stage-in = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . payload execution = 19 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . stage-out = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . log creation = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | ..............................
[2025-06-04 03:10:20] 2025-06-04 10:10:06,501 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 03:10:20] 2025-06-04 10:10:06,501 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678392062/pilotlog.txt
[2025-06-04 03:10:20] 2025-06-04 10:10:06,517 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 03:10:20] - Log from pilotlog.txt -
[2025-06-04 03:10:20] 2025-06-04 10:10:06,495 | INFO     | extracted standard info from prmon json
[2025-06-04 03:10:20] 2025-06-04 10:10:06,495 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:10:20] 2025-06-04 10:10:06,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:10:20] 2025-06-04 10:10:06,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:10:20] 2025-06-04 10:10:06,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:10:20] 2025-06-04 10:10:06,497 | WARNING  | found no stored workdir sizes
[2025-06-04 03:10:20] 2025-06-04 10:10:06,497 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 03:10:20] 2025-06-04 10:10:06,499 | WARNING  | wrong length of table data, x=[1749031667.0], y=[1823.0] (must be same and length>=4)
[2025-06-04 03:10:20] 2025-06-04 10:10:06,499 | INFO     | ..............................
[2025-06-04 03:10:20] 2025-06-04 10:10:06,499 | INFO     | . Timing measurements:
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . get job = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . initial setup = 3 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . payload setup = 7 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . stage-in = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . payload execution = 19 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . stage-out = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . log creation = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | ..............................
[2025-06-04 03:10:20] 2025-06-04 10:10:06,501 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 03:10:20] 2025-06-04 10:10:06,501 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678392062/pilotlog.txt
[2025-06-04 03:10:20] 2025-06-04 10:10:06,517 | WARNING  | 
[2025-06-04 03:10:20] [begin log extracts]
[2025-06-04 03:10:20] - Log from pilotlog.txt -
[2025-06-04 03:10:20] 2025-06-04 10:10:06,495 | INFO     | extracted standard info from prmon json
[2025-06-04 03:10:20] 2025-06-04 10:10:06,495 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:10:20] 2025-06-04 10:10:06,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:10:20] 2025-06-04 10:10:06,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:10:20] 2025-06-04 10:10:06,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:10:20] 2025-06-04 10:10:06,497 | WARNING  | found no stored workdir sizes
[2025-06-04 03:10:20] 2025-06-04 10:10:06,497 | INFO     | will not add max space = 0 B to job metrics
[2025-06-04 03:10:20] 2025-06-04 10:10:06,499 | WARNING  | wrong length of table data, x=[1749031667.0], y=[1823.0] (must be same and length>=4)
[2025-06-04 03:10:20] 2025-06-04 10:10:06,499 | INFO     | ..............................
[2025-06-04 03:10:20] 2025-06-04 10:10:06,499 | INFO     | . Timing measurements:
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . get job = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . initial setup = 3 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . payload setup = 7 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . stage-in = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . payload execution = 19 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . stage-out = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | . log creation = 0 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,500 | INFO     | ..............................
[2025-06-04 03:10:20] 2025-06-04 10:10:06,501 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 03:10:20] 2025-06-04 10:10:06,501 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678392062/pilotlog.txt
[2025-06-04 03:10:20] [end log extracts]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,518 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 03:10:20] 2025-06-04 10:10:06,519 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-04 03:10:20] 2025-06-04 10:10:06,605 | INFO     | 
[2025-06-04 03:10:20] 2025-06-04 10:10:06,605 | INFO     | job summary report
[2025-06-04 03:10:20] 2025-06-04 10:10:06,605 | INFO     | --------------------------------------------------
[2025-06-04 03:10:20] 2025-06-04 10:10:06,605 | INFO     | PanDA job id: 6678392062
[2025-06-04 03:10:20] 2025-06-04 10:10:06,605 | INFO     | task id: 45006595
[2025-06-04 03:10:20] 2025-06-04 10:10:06,605 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-04 03:07:57,624 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 03:10:20] 2025-06-04 10:10:06,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:10:20] 2025-06-04 10:10:06,605 | INFO     | pilot state: failed 
[2025-06-04 03:10:20] 2025-06-04 10:10:06,605 | INFO     | transexitcode: 65
[2025-06-04 03:10:20] 2025-06-04 10:10:06,605 | INFO     | exeerrorcode: 65
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | exitcode: 65
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | cpuconsumptiontime: 21 s
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | nevents: 0
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | neventsw: 0
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | pid: 2721536
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | pgrp: 2721536
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | corecount: 12
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | event service: False
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | sizes: {0: 2404356, 1: 2405209, 6: 2405415, 12: 2405443, 30: 2432999, 151: 2433113}
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | --------------------------------------------------
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | 
[2025-06-04 03:10:20] 2025-06-04 10:10:06,606 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-04 03:10:20] 2025-06-04 10:10:06,629 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:10:20] 2025-06-04 10:10:06,631 | INFO     | job 6678392062 has completed (purged errors)
[2025-06-04 03:10:20] 2025-06-04 10:10:06,631 | INFO     | overall cleanup function is called
[2025-06-04 03:10:20] 2025-06-04 10:10:07,637 | INFO     | --- collectZombieJob: --- 10, [2721536]
[2025-06-04 03:10:20] 2025-06-04 10:10:07,637 | INFO     | zombie collector waiting for pid 2721536
[2025-06-04 03:10:20] 2025-06-04 10:10:07,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:10:20] 2025-06-04 10:10:07,638 | INFO     | collected zombie processes
[2025-06-04 03:10:20] 2025-06-04 10:10:07,638 | INFO     | will attempt to kill all subprocesses of pid=2721536
[2025-06-04 03:10:20] 2025-06-04 10:10:07,890 | INFO     | process IDs to be killed: [2721536] (in reverse order)
[2025-06-04 03:10:20] 2025-06-04 10:10:07,979 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:10:20] 2025-06-04 10:10:07,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:10:20] 2025-06-04 10:10:07,990 | INFO     | did not find any defunct processes belonging to 2721536
[2025-06-04 03:10:20] 2025-06-04 10:10:08,000 | INFO     | did not find any defunct processes belonging to 2721536
[2025-06-04 03:10:20] 2025-06-04 10:10:08,001 | INFO     | ready for new job
[2025-06-04 03:10:20] 2025-06-04 10:10:08,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:10:20] 2025-06-04 10:10:08,003 | INFO     | **************************************
[2025-06-04 03:10:20] 2025-06-04 10:10:08,003 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:10:20] 2025-06-04 10:10:08,003 | INFO     | **************************************
[2025-06-04 03:10:20] 2025-06-04 10:10:08,003 | INFO     | 
[2025-06-04 03:10:20] 2025-06-04 10:10:08,006 | INFO     | architecture information:
[2025-06-04 03:10:20] 2025-06-04 10:10:08,006 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:10:20] 2025-06-04 10:10:08,019 | INFO     | cat /etc/os-release:
[2025-06-04 03:10:20] NAME="CentOS Linux"
[2025-06-04 03:10:20] VERSION="7 (Core)"
[2025-06-04 03:10:20] ID="centos"
[2025-06-04 03:10:20] ID_LIKE="rhel fedora"
[2025-06-04 03:10:20] VERSION_ID="7"
[2025-06-04 03:10:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:10:20] ANSI_COLOR="0;31"
[2025-06-04 03:10:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:10:20] HOME_URL="https://www.centos.org/"
[2025-06-04 03:10:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:10:20] 
[2025-06-04 03:10:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:10:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:10:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:10:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:10:20] 
[2025-06-04 03:10:20] 2025-06-04 10:10:08,019 | INFO     | **************************************
[2025-06-04 03:10:20] 2025-06-04 10:10:08,522 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-04 03:10:20] 2025-06-04 10:10:08,541 | INFO     | sufficient remaining disk space (1759802032128 B)
[2025-06-04 03:10:20] 2025-06-04 10:10:08,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:10:20] 2025-06-04 10:10:08,541 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:10:20] 2025-06-04 10:10:08,541 | INFO     | update_server=False
[2025-06-04 03:10:20] 2025-06-04 10:10:08,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:10:20] 2025-06-04 10:10:08,542 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:10:20] 2025-06-04 10:10:08,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:10:20] 2025-06-04 10:10:08,542 | INFO     | aborting loop
[2025-06-04 03:10:20] 2025-06-04 10:10:08,546 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:10:20] 2025-06-04 10:10:08,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:10:20] 2025-06-04 10:10:08,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:10:20] 2025-06-04 10:10:09,054 | INFO     | all data control threads have been joined
[2025-06-04 03:10:20] 2025-06-04 10:10:09,225 | INFO     | all payload control threads have been joined
[2025-06-04 03:10:20] 2025-06-04 10:10:09,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:10:20] 2025-06-04 10:10:09,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:10:20] 2025-06-04 10:10:09,547 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:09,547 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:09,548 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:09,708 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:09,781 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:09,866 | INFO     | all job control threads have been joined
[2025-06-04 03:10:20] 2025-06-04 10:10:10,060 | INFO     | [data] control thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:10,061 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:10,227 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:10,230 | INFO     | [payload] control thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:10,274 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:10,319 | INFO     | [job] validate thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:10,502 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:10,629 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:10,871 | INFO     | [job] control thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:11,287 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:13,433 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:10:20] 2025-06-04 10:10:15,469 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872009123648)>', '<ExcThread(monitor, started 139871112918784)>']
[2025-06-04 03:10:20] 2025-06-04 10:10:15,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:10:20] 2025-06-04 10:10:15,585 | INFO     | [monitor] control thread has ended
[2025-06-04 03:10:20] 2025-06-04 10:10:20,494 | INFO     | all workflow threads have been joined
[2025-06-04 03:10:20] 2025-06-04 10:10:20,495 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:10:20] 2025-06-04 10:10:20,495 | INFO     | traces error code: 0
[2025-06-04 03:10:20] 2025-06-04 10:10:20,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:10:20] 2025-06-04 10:10:20,634 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:10:20] 2025-06-04 10:10:20,638 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:10:20] 2025-06-04 10:10:20,642 [wrapper] pilotpid: 2714547
[2025-06-04 03:10:20] 2025-06-04 10:10:20,646 [wrapper] Pilot exit status: 0
[2025-06-04 03:10:20] 2025-06-04 10:10:20,660 [wrapper] pandaids: 6678392062
[2025-06-04 03:10:20] 2025-06-04 10:10:20,728 [wrapper] cleanup supervisor_pilot 2714553 2714548
[2025-06-04 03:10:20] 2025-06-04 10:10:20,733 [wrapper] Test setup, not cleaning
[2025-06-04 03:10:20] 2025-06-04 10:10:20,738 [wrapper] apfmon messages muted
[2025-06-04 03:10:20] 2025-06-04 10:10:20,742 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:10:20] 2025-06-04 10:10:20,746 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:10:20]  *** Error codes and diagnostics ***
[2025-06-04 03:10:20]     "exeErrorCode": 65,
[2025-06-04 03:10:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 03:10:20]     "pilotErrorCode": 1305,
[2025-06-04 03:10:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-04 03:10:20]  *** Listing of results directory ***
[2025-06-04 03:10:20] total 213528
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc    495897 Jun  4 00:34 pilot3.tar.gz
[2025-06-04 03:10:20] -rwx------. 1 boinc boinc     37140 Jun  4 00:38 runpilot2-wrapper.sh
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc      5111 Jun  4 00:38 queuedata.json
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc       100 Jun  4 03:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:10:20] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 03:07 run_atlas
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc       105 Jun  4 03:07 job.xml
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc      6597 Jun  4 03:07 init_data.xml
[2025-06-04 03:10:20] -rw-r--r--. 2 boinc boinc 214627801 Jun  4 03:07 EVNT.45006593._002204.pool.root.1
[2025-06-04 03:10:20] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:07 start_atlas.sh
[2025-06-04 03:10:20] drwxrwx--x. 2 boinc boinc      4096 Jun  4 03:07 shared
[2025-06-04 03:10:20] -rw-r--r--. 2 boinc boinc    508880 Jun  4 03:07 input.tar.gz
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc         0 Jun  4 03:07 boinc_lockfile
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc      2525 Jun  4 03:07 pandaJob.out
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc    986766 Jun  4 03:07 agis_schedconf.cvmfs.json
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc   1603667 Jun  4 03:07 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:10:20] drwx------. 4 boinc boinc      4096 Jun  4 03:07 pilot3
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc       522 Jun  4 03:07 boinc_task_state.xml
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc       951 Jun  4 03:08 memory_monitor_summary.json
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc     20463 Jun  4 03:08 log.45006595._055091.job.log.tgz.1
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc        95 Jun  4 03:09 pilot_heartbeat.json
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc      8340 Jun  4 03:10 heartbeat.json
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc        22 Jun  4 03:10 wrapper_checkpoint.txt
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc      8192 Jun  4 03:10 boinc_mmap_file
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc      4352 Jun  4 03:10 pilotlog.txt
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc     73751 Jun  4 03:10 log.45006595._055091.job.log.1
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc       188 Jun  4 03:10 output.list
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc       620 Jun  4 03:10 runtime_log
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc    112640 Jun  4 03:10 result.tar.gz
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc      8484 Jun  4 03:10 runtime_log.err
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc       645 Jun  4 03:10 8WpKDmRsxg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmewaKDmGiNo2m.diag
[2025-06-04 03:10:20] -rw-r--r--. 1 boinc boinc     21424 Jun  4 03:10 stderr.txt
[2025-06-04 03:10:20] No HITS result produced
[2025-06-04 03:10:20]  *** Contents of shared directory: ***
[2025-06-04 03:10:20] total 210232
[2025-06-04 03:10:20] -rw-r--r--. 2 boinc boinc 214627801 Jun  4 03:07 ATLAS.root_0
[2025-06-04 03:10:20] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:07 start_atlas.sh
[2025-06-04 03:10:20] -rw-r--r--. 2 boinc boinc    508880 Jun  4 03:07 input.tar.gz
[2025-06-04 03:10:20] -rw-------. 1 boinc boinc    112640 Jun  4 03:10 result.tar.gz
03:10:22 (2710953): run_atlas exited; CPU time 26.518738
03:10:22 (2710953): called boinc_finish(0)

</stderr_txt>
]]>

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