Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:37:23 (21204): wrapper (7.7.26015): starting
08:37:23 (21204): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:37:23] Arguments: --nthreads 12
[2025-06-04 08:37:23] Threads: 12
[2025-06-04 08:37:23] Checking for CVMFS
[2025-06-04 08:37:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:37:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:37:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:37:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:37:23] 2.10.0.0 29567 2578 110488 146781 1 56 15033315 16777216 922 130560 0 10487536 99.998 627581 6963 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 08:37:23] CVMFS is ok
[2025-06-04 08:37:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:37:23] Checking for apptainer binary...
[2025-06-04 08:37:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:37:23] Running /usr/bin/apptainer --version
[2025-06-04 08:37:23] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 08:37:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:37:23] boinc-runner
[2025-06-04 08:37:23] apptainer works
[2025-06-04 08:37:23] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:37:23] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:37:23] Starting ATLAS job with PandaID=6678392135
[2025-06-04 08:37:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:05:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:05:51]  is_altstaged=None
[2025-06-04 09:05:51]  is_tar=False
[2025-06-04 09:05:51]  lfn=log.45006595._055164.job.log.tgz.1
[2025-06-04 09:05:51]  mtime=0
[2025-06-04 09:05:51]  protocol_id=None
[2025-06-04 09:05:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:05:51]  replicas=None
[2025-06-04 09:05:51]  scope=mc23_13p6TeV
[2025-06-04 09:05:51]  status=None
[2025-06-04 09:05:51]  status_code=0
[2025-06-04 09:05:51]  storage_token=
[2025-06-04 09:05:51]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6678392135/log.45006595._055164.job.log.tgz.1
[2025-06-04 09:05:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/77/log.45006595._055164.job.log.tgz.1
[2025-06-04 09:05:51]  workdir=None
[2025-06-04 09:05:51] ]
[2025-06-04 09:05:51] 2025-06-04 14:05:28,322 | INFO     | transferring file log.45006595._055164.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6678392135/log.45006595._055164.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 09:05:51] 2025-06-04 14:05:28,322 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6678392135/log.45006595._055164.job.log.tgz.1 /var/lib/boinc/slots/1/log.45006595._055164.job
[2025-06-04 09:05:51] 2025-06-04 14:05:28,334 | INFO     | adding to output.list: log.45006595._055164.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/77/log.45006595._055164.job.log.tg
[2025-06-04 09:05:51] 2025-06-04 14:05:28,334 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:05:51] 2025-06-04 14:05:28,335 | INFO     | summary of transferred files:
[2025-06-04 09:05:51] 2025-06-04 14:05:28,335 | INFO     |  -- lfn=log.45006595._055164.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:05:51] 2025-06-04 14:05:28,335 | INFO     | stage-out finished correctly
[2025-06-04 09:05:51] 2025-06-04 14:05:28,506 | INFO     | monitor loop #131: job 0:6678392135 is in state 'finished'
[2025-06-04 09:05:51] 2025-06-04 14:05:28,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:05:51] 2025-06-04 14:05:30,136 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:05:51] 2025-06-04 14:05:30,181 | INFO     | job 6678392135 has state=finished
[2025-06-04 09:05:51] 2025-06-04 14:05:30,182 | INFO     | preparing for final server update for job 6678392135 in state='finished'
[2025-06-04 09:05:51] 2025-06-04 14:05:30,182 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:05:51] 2025-06-04 14:05:30,182 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:05:51] 2025-06-04 14:05:30,182 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:05:51] 2025-06-04 14:05:30,182 | INFO     | job 6678392135 has finished - writing final server update
[2025-06-04 09:05:51] 2025-06-04 14:05:30,182 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:05:51] 2025-06-04 14:05:30,184 | INFO     | executing command: lscpu
[2025-06-04 09:05:51] 2025-06-04 14:05:30,207 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:05:51] 2025-06-04 14:05:31,009 | INFO     | monitor loop #132: job 0:6678392135 is in state 'finished'
[2025-06-04 09:05:51] 2025-06-04 14:05:31,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:05:51] 2025-06-04 14:05:33,510 | INFO     | monitor loop #133: job 0:6678392135 is in state 'finished'
[2025-06-04 09:05:51] 2025-06-04 14:05:33,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:05:51] 2025-06-04 14:05:34,804 | INFO     | PID=25030 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 09:05:51] 2025-06-04 14:05:34,804 | INFO     | .. there are 2 such processes running
[2025-06-04 09:05:51] 2025-06-04 14:05:35,996 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 09:05:51] 2025-06-04 14:05:35,997 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6678392135/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:05:51] 2025-06-04 14:05:35,997 | INFO     | extracted standard info from prmon json
[2025-06-04 09:05:51] 2025-06-04 14:05:35,997 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:05:51] 2025-06-04 14:05:35,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:05:51] 2025-06-04 14:05:35,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:05:51] 2025-06-04 14:05:35,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:05:51] 2025-06-04 14:05:35,998 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:05:51] 2025-06-04 14:05:35,998 | INFO     | sum of square deviations: 2865170.0
[2025-06-04 09:05:51] 2025-06-04 14:05:35,999 | INFO     | sum of deviations: 72578898.0
[2025-06-04 09:05:51] 2025-06-04 14:05:35,999 | INFO     | mean x: 1749045184.0
[2025-06-04 09:05:51] 2025-06-04 14:05:35,999 | INFO     | mean y: 2910923.761904762
[2025-06-04 09:05:51] 2025-06-04 14:05:35,999 | INFO     | -- intersect: -44302932012.931984
[2025-06-04 09:05:51] 2025-06-04 14:05:35,999 | INFO     | intersect: -44302932012.931984
[2025-06-04 09:05:51] 2025-06-04 14:05:35,999 | INFO     | chi2: 2.2131610434875176e-05
[2025-06-04 09:05:51] 2025-06-04 14:05:35,999 | INFO     | -- intersect: -44302932012.931984
[2025-06-04 09:05:51] 2025-06-04 14:05:35,999 | INFO     | current memory leak: 25.33 B/s (using 21 data points, chi2=0.00)
[2025-06-04 09:05:51] 2025-06-04 14:05:36,000 | INFO     | ..............................
[2025-06-04 09:05:51] 2025-06-04 14:05:36,000 | INFO     | . Timing measurements:
[2025-06-04 09:05:51] 2025-06-04 14:05:36,000 | INFO     | . get job = 0 s
[2025-06-04 09:05:51] 2025-06-04 14:05:36,000 | INFO     | . initial setup = 3 s
[2025-06-04 09:05:51] 2025-06-04 14:05:36,000 | INFO     | . payload setup = 3 s
[2025-06-04 09:05:51] 2025-06-04 14:05:36,000 | INFO     | . stage-in = 0 s
[2025-06-04 09:05:51] 2025-06-04 14:05:36,000 | INFO     | . payload execution = 1657 s
[2025-06-04 09:05:51] 2025-06-04 14:05:36,000 | INFO     | . stage-out = 0 s
[2025-06-04 09:05:51] 2025-06-04 14:05:36,000 | INFO     | . log creation = 0 s
[2025-06-04 09:05:51] 2025-06-04 14:05:36,000 | INFO     | ..............................
[2025-06-04 09:05:51] 2025-06-04 14:05:36,032 | INFO     | 
[2025-06-04 09:05:51] 2025-06-04 14:05:36,032 | INFO     | job summary report
[2025-06-04 09:05:51] 2025-06-04 14:05:36,032 | INFO     | --------------------------------------------------
[2025-06-04 09:05:51] 2025-06-04 14:05:36,032 | INFO     | PanDA job id: 6678392135
[2025-06-04 09:05:51] 2025-06-04 14:05:36,032 | INFO     | task id: 45006595
[2025-06-04 09:05:51] 2025-06-04 14:05:36,032 | INFO     | errors: (none)
[2025-06-04 09:05:51] 2025-06-04 14:05:36,032 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:05:51] 2025-06-04 14:05:36,032 | INFO     | pilot state: finished 
[2025-06-04 09:05:51] 2025-06-04 14:05:36,032 | INFO     | transexitcode: 0
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | exeerrorcode: 0
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | exeerrordiag: 
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | exitcode: 0
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | exitmsg: OK
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | cpuconsumptiontime: 18116 s
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | nevents: 400
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | neventsw: 0
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | pid: 31998
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | pgrp: 31998
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | corecount: 12
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | event service: False
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | sizes: {0: 2396514, 1: 2397370, 3: 2397576, 11: 2397604, 1664: 2422419, 1665: 2431360, 1667: 2431544, 1673: 2431714}
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | --------------------------------------------------
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | 
[2025-06-04 09:05:51] 2025-06-04 14:05:36,033 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-04 09:05:51] 2025-06-04 14:05:36,047 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | job 6678392135 has completed (purged errors)
[2025-06-04 09:05:51] 2025-06-04 14:05:36,048 | INFO     | overall cleanup function is called
[2025-06-04 09:05:51] 2025-06-04 14:05:37,054 | INFO     | --- collectZombieJob: --- 10, [31998]
[2025-06-04 09:05:51] 2025-06-04 14:05:37,054 | INFO     | zombie collector waiting for pid 31998
[2025-06-04 09:05:51] 2025-06-04 14:05:37,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:05:51] 2025-06-04 14:05:37,054 | INFO     | collected zombie processes
[2025-06-04 09:05:51] 2025-06-04 14:05:37,054 | INFO     | will attempt to kill all subprocesses of pid=31998
[2025-06-04 09:05:51] 2025-06-04 14:05:37,115 | INFO     | process IDs to be killed: [31998] (in reverse order)
[2025-06-04 09:05:51] 2025-06-04 14:05:37,142 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:05:51] 2025-06-04 14:05:37,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:05:51] 2025-06-04 14:05:37,144 | INFO     | did not find any defunct processes belonging to 31998
[2025-06-04 09:05:51] 2025-06-04 14:05:37,146 | INFO     | did not find any defunct processes belonging to 31998
[2025-06-04 09:05:51] 2025-06-04 14:05:37,146 | INFO     | ready for new job
[2025-06-04 09:05:51] 2025-06-04 14:05:37,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:05:51] 2025-06-04 14:05:37,147 | INFO     | **************************************
[2025-06-04 09:05:51] 2025-06-04 14:05:37,147 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:05:51] 2025-06-04 14:05:37,147 | INFO     | **************************************
[2025-06-04 09:05:51] 2025-06-04 14:05:37,147 | INFO     | 
[2025-06-04 09:05:51] 2025-06-04 14:05:37,148 | INFO     | architecture information:
[2025-06-04 09:05:51] 2025-06-04 14:05:37,148 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:05:51] 2025-06-04 14:05:37,160 | INFO     | cat /etc/os-release:
[2025-06-04 09:05:51] NAME="CentOS Linux"
[2025-06-04 09:05:51] VERSION="7 (Core)"
[2025-06-04 09:05:51] ID="centos"
[2025-06-04 09:05:51] ID_LIKE="rhel fedora"
[2025-06-04 09:05:51] VERSION_ID="7"
[2025-06-04 09:05:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:05:51] ANSI_COLOR="0;31"
[2025-06-04 09:05:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:05:51] HOME_URL="https://www.centos.org/"
[2025-06-04 09:05:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:05:51] 
[2025-06-04 09:05:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:05:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:05:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:05:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:05:51] 
[2025-06-04 09:05:51] 2025-06-04 14:05:37,160 | INFO     | **************************************
[2025-06-04 09:05:51] 2025-06-04 14:05:37,662 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-04 09:05:51] 2025-06-04 14:05:37,672 | INFO     | sufficient remaining disk space (3887989784576 B)
[2025-06-04 09:05:51] 2025-06-04 14:05:37,672 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:05:51] 2025-06-04 14:05:37,672 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:05:51] 2025-06-04 14:05:37,672 | INFO     | update_server=False
[2025-06-04 09:05:51] 2025-06-04 14:05:37,672 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:05:51] 2025-06-04 14:05:37,672 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:05:51] 2025-06-04 14:05:37,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:05:51] 2025-06-04 14:05:37,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:05:51] 2025-06-04 14:05:37,673 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:05:51] 2025-06-04 14:05:37,673 | INFO     | aborting loop
[2025-06-04 09:05:51] 2025-06-04 14:05:37,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:05:51] 2025-06-04 14:05:37,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:05:51] 2025-06-04 14:05:37,882 | INFO     | all data control threads have been joined
[2025-06-04 09:05:51] 2025-06-04 14:05:38,082 | INFO     | all job control threads have been joined
[2025-06-04 09:05:51] 2025-06-04 14:05:38,674 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:38,674 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:38,678 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:38,785 | INFO     | all payload control threads have been joined
[2025-06-04 09:05:51] 2025-06-04 14:05:38,886 | INFO     | [data] control thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:38,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:05:51] 2025-06-04 14:05:39,087 | INFO     | [job] control thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:39,166 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:39,727 | INFO     | [job] validate thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:39,742 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:39,790 | INFO     | [payload] control thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:39,894 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:39,926 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:39,943 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:39,990 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:40,150 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:40,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:05:51] 2025-06-04 14:05:40,892 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:44,690 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:05:51] 2025-06-04 14:05:46,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139712781530944)>', '<ExcThread(monitor, started 139712425600768)>']
[2025-06-04 09:05:51] 2025-06-04 14:05:46,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:05:51] 2025-06-04 14:05:46,710 | INFO     | [monitor] control thread has ended
[2025-06-04 09:05:51] 2025-06-04 14:05:51,430 | INFO     | all workflow threads have been joined
[2025-06-04 09:05:51] 2025-06-04 14:05:51,430 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:05:51] 2025-06-04 14:05:51,430 | INFO     | traces error code: 0
[2025-06-04 09:05:51] 2025-06-04 14:05:51,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:05:51] 2025-06-04 14:05:51,490 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:05:51] 2025-06-04 14:05:51,491 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:05:51] 2025-06-04 14:05:51,492 [wrapper] pilotpid: 25030
[2025-06-04 09:05:51] 2025-06-04 14:05:51,493 [wrapper] Pilot exit status: 0
[2025-06-04 09:05:51] 2025-06-04 14:05:51,497 [wrapper] pandaids: 6678392135
[2025-06-04 09:05:51] 2025-06-04 14:05:51,516 [wrapper] cleanup supervisor_pilot  2941 25031
[2025-06-04 09:05:51] 2025-06-04 14:05:51,518 [wrapper] Test setup, not cleaning
[2025-06-04 09:05:51] 2025-06-04 14:05:51,520 [wrapper] apfmon messages muted
[2025-06-04 09:05:51] 2025-06-04 14:05:51,522 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:05:51] 2025-06-04 14:05:51,523 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:05:51]  *** Error codes and diagnostics ***
[2025-06-04 09:05:51]     "exeErrorCode": 0,
[2025-06-04 09:05:51]     "exeErrorDiag": "",
[2025-06-04 09:05:51]     "pilotErrorCode": 0,
[2025-06-04 09:05:51]     "pilotErrorDiag": "",
[2025-06-04 09:05:51]  *** Listing of results directory ***
[2025-06-04 09:05:51] total 387096
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:34 queuedata.json
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc    495897 Jun  4 02:34 pilot3.tar.gz
[2025-06-04 09:05:51] -rwx------ 1 boinc boinc     37140 Jun  4 02:36 runpilot2-wrapper.sh
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc       100 Jun  4 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:05:51] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 08:37 run_atlas
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc       105 Jun  4 08:37 job.xml
[2025-06-04 09:05:51] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:37 start_atlas.sh
[2025-06-04 09:05:51] drwxrwx--x 1 boinc boinc        76 Jun  4 08:37 shared
[2025-06-04 09:05:51] -rw-r--r-- 2 boinc boinc    508886 Jun  4 08:37 input.tar.gz
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc     10044 Jun  4 08:37 init_data.xml
[2025-06-04 09:05:51] -rw-r--r-- 2 boinc boinc 213379142 Jun  4 08:37 EVNT.45006593._002207.pool.root.1
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc         0 Jun  4 08:37 boinc_lockfile
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc      2525 Jun  4 08:37 pandaJob.out
[2025-06-04 09:05:51] -rw------- 1 boinc boinc    986819 Jun  4 08:37 agis_schedconf.cvmfs.json
[2025-06-04 09:05:51] -rw------- 1 boinc boinc   1598969 Jun  4 08:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:05:51] drwx------ 1 boinc boinc       368 Jun  4 08:37 pilot3
[2025-06-04 09:05:51] -rw------- 1 boinc boinc        95 Jun  4 09:04 pilot_heartbeat.json
[2025-06-04 09:05:51] -rw------- 1 boinc boinc 178122719 Jun  4 09:05 HITS.45006595._055164.pool.root.1
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc       529 Jun  4 09:05 boinc_task_state.xml
[2025-06-04 09:05:51] -rw------- 1 boinc boinc      1024 Jun  4 09:05 memory_monitor_summary.json
[2025-06-04 09:05:51] -rw------- 1 boinc boinc    333929 Jun  4 09:05 log.45006595._055164.job.log.tgz.1
[2025-06-04 09:05:51] -rw------- 1 boinc boinc      7685 Jun  4 09:05 heartbeat.json
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc      8192 Jun  4 09:05 boinc_mmap_file
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc        27 Jun  4 09:05 wrapper_checkpoint.txt
[2025-06-04 09:05:51] -rw------- 1 boinc boinc      4478 Jun  4 09:05 pilotlog.txt
[2025-06-04 09:05:51] -rw------- 1 boinc boinc    202012 Jun  4 09:05 log.45006595._055164.job.log.1
[2025-06-04 09:05:51] -rw------- 1 boinc boinc       357 Jun  4 09:05 output.list
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc       620 Jun  4 09:05 runtime_log
[2025-06-04 09:05:51] -rw------- 1 boinc boinc    552960 Jun  4 09:05 result.tar.gz
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc      8683 Jun  4 09:05 runtime_log.err
[2025-06-04 09:05:51] -rw------- 1 boinc boinc       652 Jun  4 09:05 C7IODmIrxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPenKDm8BLqQo.diag
[2025-06-04 09:05:51] -rw-r--r-- 1 boinc boinc     21195 Jun  4 09:05 stderr.txt
[2025-06-04 09:05:51] HITS file was successfully produced:
[2025-06-04 09:05:51] -rw------- 1 boinc boinc 178122719 Jun  4 09:05 shared/HITS.pool.root.1
[2025-06-04 09:05:51]  *** Contents of shared directory: ***
[2025-06-04 09:05:51] total 383384
[2025-06-04 09:05:51] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:37 start_atlas.sh
[2025-06-04 09:05:51] -rw-r--r-- 2 boinc boinc    508886 Jun  4 08:37 input.tar.gz
[2025-06-04 09:05:51] -rw-r--r-- 2 boinc boinc 213379142 Jun  4 08:37 ATLAS.root_0
[2025-06-04 09:05:51] -rw------- 1 boinc boinc 178122719 Jun  4 09:05 HITS.pool.root.1
[2025-06-04 09:05:51] -rw------- 1 boinc boinc    552960 Jun  4 09:05 result.tar.gz
09:05:53 (21204): run_atlas exited; CPU time 18123.102266
09:05:53 (21204): called boinc_finish(0)

</stderr_txt>
]]>

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