Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:08:26 (28282): wrapper (7.7.26015): starting
08:08:26 (28282): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 08:08:26] Arguments: --nthreads 12
[2025-06-04 08:08:26] Threads: 12
[2025-06-04 08:08:26] Checking for CVMFS
[2025-06-04 08:08:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 08:08:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 08:08:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 08:08:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 08:08:26] 2.10.0.0 29567 2549 113144 146780 2 187 15021470 16777216 922 130560 0 10373737 99.998 626286 7032 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-04 08:08:26] CVMFS is ok
[2025-06-04 08:08:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 08:08:26] Checking for apptainer binary...
[2025-06-04 08:08:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 08:08:26] Running /usr/bin/apptainer --version
[2025-06-04 08:08:26] apptainer version 1.3.6-150600.4.9.1
[2025-06-04 08:08:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 08:08:26] boinc-runner
[2025-06-04 08:08:26] apptainer works
[2025-06-04 08:08:26] Set ATHENA_PROC_NUMBER=12
[2025-06-04 08:08:26] Set ATHENA_CORE_NUMBER=12
[2025-06-04 08:08:26] Starting ATLAS job with PandaID=6678285459
[2025-06-04 08:08:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:37:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:37:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 08:37:18]  is_altstaged=None
[2025-06-04 08:37:18]  is_tar=False
[2025-06-04 08:37:18]  lfn=log.45006595._050668.job.log.tgz.1
[2025-06-04 08:37:18]  mtime=0
[2025-06-04 08:37:18]  protocol_id=None
[2025-06-04 08:37:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 08:37:18]  replicas=None
[2025-06-04 08:37:18]  scope=mc23_13p6TeV
[2025-06-04 08:37:18]  status=None
[2025-06-04 08:37:18]  status_code=0
[2025-06-04 08:37:18]  storage_token=
[2025-06-04 08:37:18]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6678285459/log.45006595._050668.job.log.tgz.1
[2025-06-04 08:37:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/b3/log.45006595._050668.job.log.tgz.1
[2025-06-04 08:37:18]  workdir=None
[2025-06-04 08:37:18] ]
[2025-06-04 08:37:18] 2025-06-04 13:36:52,241 | INFO     | transferring file log.45006595._050668.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6678285459/log.45006595._050668.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 08:37:18] 2025-06-04 13:36:52,241 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6678285459/log.45006595._050668.job.log.tgz.1 /var/lib/boinc/slots/1/log.45006595._050668.job
[2025-06-04 08:37:18] 2025-06-04 13:36:52,252 | INFO     | adding to output.list: log.45006595._050668.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/36/b3/log.45006595._050668.job.log.tg
[2025-06-04 08:37:18] 2025-06-04 13:36:52,253 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 08:37:18] 2025-06-04 13:36:52,253 | INFO     | summary of transferred files:
[2025-06-04 08:37:18] 2025-06-04 13:36:52,253 | INFO     |  -- lfn=log.45006595._050668.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 08:37:18] 2025-06-04 13:36:52,253 | INFO     | stage-out finished correctly
[2025-06-04 08:37:18] 2025-06-04 13:36:52,292 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 08:37:18] 2025-06-04 13:36:52,966 | INFO     | job 6678285459 has state=finished
[2025-06-04 08:37:18] 2025-06-04 13:36:52,966 | INFO     | preparing for final server update for job 6678285459 in state='finished'
[2025-06-04 08:37:18] 2025-06-04 13:36:52,967 | INFO     | this job has now completed (state=finished)
[2025-06-04 08:37:18] 2025-06-04 13:36:52,967 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 08:37:18] 2025-06-04 13:36:52,967 | INFO     | log transfer has been attempted: DONE
[2025-06-04 08:37:18] 2025-06-04 13:36:52,967 | INFO     | job 6678285459 has finished - writing final server update
[2025-06-04 08:37:18] 2025-06-04 13:36:52,967 | INFO     | total number of processed events: 400 (read)
[2025-06-04 08:37:18] 2025-06-04 13:36:52,969 | INFO     | executing command: lscpu
[2025-06-04 08:37:18] 2025-06-04 13:36:52,990 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:37:18] 2025-06-04 13:36:56,009 | WARNING  | process 6778 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:37:18] 2025-06-04 13:36:56,009 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6678285459/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:37:18] 2025-06-04 13:36:56,074 | INFO     | number of running child processes to parent process 6778: 1
[2025-06-04 08:37:18] 2025-06-04 13:36:56,074 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:37:18] 2025-06-04 13:36:58,450 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:37:18] 2025-06-04 13:36:58,451 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6678285459/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:37:18] 2025-06-04 13:36:58,451 | INFO     | extracted standard info from prmon json
[2025-06-04 08:37:18] 2025-06-04 13:36:58,451 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:37:18] 2025-06-04 13:36:58,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:37:18] 2025-06-04 13:36:58,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:37:18] 2025-06-04 13:36:58,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | sum of square deviations: 2865170.0
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | sum of deviations: -37699890.999999985
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | mean x: 1749043447.0
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | mean y: 2710826.3333333335
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | -- intersect: 23016614820.219994
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | intersect: 23016614820.219994
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | chi2: 0.004796580777251495
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | -- intersect: 23016614820.219994
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | current memory leak: -13.16 B/s (using 21 data points, chi2=0.00)
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | ..............................
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | . Timing measurements:
[2025-06-04 08:37:18] 2025-06-04 13:36:58,452 | INFO     | . get job = 0 s
[2025-06-04 08:37:18] 2025-06-04 13:36:58,453 | INFO     | . initial setup = 3 s
[2025-06-04 08:37:18] 2025-06-04 13:36:58,453 | INFO     | . payload setup = 2 s
[2025-06-04 08:37:18] 2025-06-04 13:36:58,453 | INFO     | . stage-in = 0 s
[2025-06-04 08:37:18] 2025-06-04 13:36:58,453 | INFO     | . payload execution = 1679 s
[2025-06-04 08:37:18] 2025-06-04 13:36:58,453 | INFO     | . stage-out = 0 s
[2025-06-04 08:37:18] 2025-06-04 13:36:58,453 | INFO     | . log creation = 0 s
[2025-06-04 08:37:18] 2025-06-04 13:36:58,453 | INFO     | ..............................
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | 
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | job summary report
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | --------------------------------------------------
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | PanDA job id: 6678285459
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | task id: 45006595
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | errors: (none)
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | pilot state: finished 
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | transexitcode: 0
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | exeerrorcode: 0
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | exeerrordiag: 
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | exitcode: 0
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | exitmsg: OK
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | cpuconsumptiontime: 17961 s
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | nevents: 400
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | neventsw: 0
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | pid: 6778
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | pgrp: 6778
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | corecount: 12
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | event service: False
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | sizes: {0: 2397286, 2: 2397492, 11: 2397520, 1686: 2431280, 1692: 2431394}
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | --------------------------------------------------
[2025-06-04 08:37:18] 2025-06-04 13:36:58,565 | INFO     | 
[2025-06-04 08:37:18] 2025-06-04 13:36:58,566 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | job 6678285459 has completed (purged errors)
[2025-06-04 08:37:18] 2025-06-04 13:36:58,579 | INFO     | overall cleanup function is called
[2025-06-04 08:37:18] 2025-06-04 13:36:59,587 | INFO     | --- collectZombieJob: --- 10, [6778]
[2025-06-04 08:37:18] 2025-06-04 13:36:59,587 | INFO     | zombie collector waiting for pid 6778
[2025-06-04 08:37:18] 2025-06-04 13:36:59,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:37:18] 2025-06-04 13:36:59,587 | INFO     | collected zombie processes
[2025-06-04 08:37:18] 2025-06-04 13:36:59,587 | INFO     | will attempt to kill all subprocesses of pid=6778
[2025-06-04 08:37:18] 2025-06-04 13:36:59,642 | INFO     | process IDs to be killed: [6778] (in reverse order)
[2025-06-04 08:37:18] 2025-06-04 13:36:59,673 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:37:18] 2025-06-04 13:36:59,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:37:18] 2025-06-04 13:36:59,676 | INFO     | did not find any defunct processes belonging to 6778
[2025-06-04 08:37:18] 2025-06-04 13:36:59,678 | INFO     | did not find any defunct processes belonging to 6778
[2025-06-04 08:37:18] 2025-06-04 13:36:59,678 | INFO     | ready for new job
[2025-06-04 08:37:18] 2025-06-04 13:36:59,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:37:18] 2025-06-04 13:36:59,679 | INFO     | **************************************
[2025-06-04 08:37:18] 2025-06-04 13:36:59,679 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:37:18] 2025-06-04 13:36:59,679 | INFO     | **************************************
[2025-06-04 08:37:18] 2025-06-04 13:36:59,679 | INFO     | 
[2025-06-04 08:37:18] 2025-06-04 13:36:59,681 | INFO     | architecture information:
[2025-06-04 08:37:18] 2025-06-04 13:36:59,681 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:37:18] 2025-06-04 13:36:59,691 | INFO     | cat /etc/os-release:
[2025-06-04 08:37:18] NAME="CentOS Linux"
[2025-06-04 08:37:18] VERSION="7 (Core)"
[2025-06-04 08:37:18] ID="centos"
[2025-06-04 08:37:18] ID_LIKE="rhel fedora"
[2025-06-04 08:37:18] VERSION_ID="7"
[2025-06-04 08:37:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:37:18] ANSI_COLOR="0;31"
[2025-06-04 08:37:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:37:18] HOME_URL="https://www.centos.org/"
[2025-06-04 08:37:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:37:18] 
[2025-06-04 08:37:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:37:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:37:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:37:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:37:18] 
[2025-06-04 08:37:18] 2025-06-04 13:36:59,691 | INFO     | **************************************
[2025-06-04 08:37:18] 2025-06-04 13:37:00,193 | INFO     | PID=32164 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 08:37:18] 2025-06-04 13:37:00,194 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-04 08:37:18] 2025-06-04 13:37:00,194 | INFO     | .. there are 2 such processes running
[2025-06-04 08:37:18] 2025-06-04 13:37:00,205 | INFO     | sufficient remaining disk space (3887990833152 B)
[2025-06-04 08:37:18] 2025-06-04 13:37:00,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:37:18] 2025-06-04 13:37:00,205 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:37:18] 2025-06-04 13:37:00,205 | INFO     | update_server=False
[2025-06-04 08:37:18] 2025-06-04 13:37:00,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:37:18] 2025-06-04 13:37:00,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:37:18] 2025-06-04 13:37:00,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:37:18] 2025-06-04 13:37:00,205 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:37:18] 2025-06-04 13:37:00,205 | INFO     | aborting loop
[2025-06-04 08:37:18] 2025-06-04 13:37:00,206 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:37:18] 2025-06-04 13:37:00,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:37:18] 2025-06-04 13:37:00,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:37:18] 2025-06-04 13:37:00,270 | INFO     | all data control threads have been joined
[2025-06-04 08:37:18] 2025-06-04 13:37:00,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:37:18] 2025-06-04 13:37:00,778 | INFO     | all job control threads have been joined
[2025-06-04 08:37:18] 2025-06-04 13:37:01,210 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:01,210 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:01,211 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:01,238 | INFO     | all payload control threads have been joined
[2025-06-04 08:37:18] 2025-06-04 13:37:01,275 | INFO     | [data] control thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:01,755 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:01,783 | INFO     | [job] control thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:01,878 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:02,182 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:02,242 | INFO     | [payload] control thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:02,306 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:02,343 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:02,506 | INFO     | [job] validate thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:02,530 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:02,716 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:02,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:37:18] 2025-06-04 13:37:06,826 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:10,456 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:37:18] 2025-06-04 13:37:11,459 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:37:18] 2025-06-04 13:37:13,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140305826211648)>', '<ExcThread(monitor, started 140305466631936)>']
[2025-06-04 08:37:18] 2025-06-04 13:37:14,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:37:18] 2025-06-04 13:37:14,266 | INFO     | [monitor] control thread has ended
[2025-06-04 08:37:18] 2025-06-04 13:37:18,558 | INFO     | all workflow threads have been joined
[2025-06-04 08:37:18] 2025-06-04 13:37:18,558 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:37:18] 2025-06-04 13:37:18,558 | INFO     | traces error code: 0
[2025-06-04 08:37:18] 2025-06-04 13:37:18,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:37:18] 2025-06-04 13:37:18,612 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:37:18] 2025-06-04 13:37:18,614 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:37:18] 2025-06-04 13:37:18,615 [wrapper] pilotpid: 32164
[2025-06-04 08:37:18] 2025-06-04 13:37:18,617 [wrapper] Pilot exit status: 0
[2025-06-04 08:37:18] 2025-06-04 13:37:18,622 [wrapper] pandaids: 6678285459
[2025-06-04 08:37:18] 2025-06-04 13:37:18,639 [wrapper] cleanup supervisor_pilot  9977 32165
[2025-06-04 08:37:18] 2025-06-04 13:37:18,642 [wrapper] Test setup, not cleaning
[2025-06-04 08:37:18] 2025-06-04 13:37:18,644 [wrapper] apfmon messages muted
[2025-06-04 08:37:18] 2025-06-04 13:37:18,646 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:37:18] 2025-06-04 13:37:18,648 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:37:18]  *** Error codes and diagnostics ***
[2025-06-04 08:37:18]     "exeErrorCode": 0,
[2025-06-04 08:37:18]     "exeErrorDiag": "",
[2025-06-04 08:37:18]     "pilotErrorCode": 0,
[2025-06-04 08:37:18]     "pilotErrorDiag": "",
[2025-06-04 08:37:18]  *** Listing of results directory ***
[2025-06-04 08:37:18] total 386676
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:59 pilot3.tar.gz
[2025-06-04 08:37:18] -rwx------ 1 boinc boinc     37140 Jun  3 21:24 runpilot2-wrapper.sh
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:24 queuedata.json
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc       100 Jun  4 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:37:18] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 08:08 run_atlas
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc       105 Jun  4 08:08 job.xml
[2025-06-04 08:37:18] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:08 start_atlas.sh
[2025-06-04 08:37:18] drwxrwx--x 1 boinc boinc        76 Jun  4 08:08 shared
[2025-06-04 08:37:18] -rw-r--r-- 2 boinc boinc    508880 Jun  4 08:08 input.tar.gz
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc     10044 Jun  4 08:08 init_data.xml
[2025-06-04 08:37:18] -rw-r--r-- 2 boinc boinc 216833592 Jun  4 08:08 EVNT.45006593._000244.pool.root.1
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc         0 Jun  4 08:08 boinc_lockfile
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc      2522 Jun  4 08:08 pandaJob.out
[2025-06-04 08:37:18] -rw------- 1 boinc boinc    986811 Jun  4 08:08 agis_schedconf.cvmfs.json
[2025-06-04 08:37:18] -rw------- 1 boinc boinc   1598969 Jun  4 08:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:37:18] drwx------ 1 boinc boinc       368 Jun  4 08:08 pilot3
[2025-06-04 08:37:18] -rw------- 1 boinc boinc 174217158 Jun  4 08:36 HITS.45006595._050668.pool.root.1
[2025-06-04 08:37:18] -rw------- 1 boinc boinc        95 Jun  4 08:36 pilot_heartbeat.json
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc       529 Jun  4 08:36 boinc_task_state.xml
[2025-06-04 08:37:18] -rw------- 1 boinc boinc      1034 Jun  4 08:36 memory_monitor_summary.json
[2025-06-04 08:37:18] -rw------- 1 boinc boinc    340347 Jun  4 08:36 log.45006595._050668.job.log.tgz.1
[2025-06-04 08:37:18] -rw------- 1 boinc boinc      7691 Jun  4 08:36 heartbeat.json
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc        27 Jun  4 08:37 wrapper_checkpoint.txt
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc      8192 Jun  4 08:37 boinc_mmap_file
[2025-06-04 08:37:18] -rw------- 1 boinc boinc      4942 Jun  4 08:37 pilotlog.txt
[2025-06-04 08:37:18] -rw------- 1 boinc boinc    202863 Jun  4 08:37 log.45006595._050668.job.log.1
[2025-06-04 08:37:18] -rw------- 1 boinc boinc       357 Jun  4 08:37 output.list
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc       620 Jun  4 08:37 runtime_log
[2025-06-04 08:37:18] -rw------- 1 boinc boinc    563200 Jun  4 08:37 result.tar.gz
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc      8683 Jun  4 08:37 runtime_log.err
[2025-06-04 08:37:18] -rw------- 1 boinc boinc       653 Jun  4 08:37 1M8KDmXysg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOumKDmqzfkOm.diag
[2025-06-04 08:37:18] -rw-r--r-- 1 boinc boinc     21065 Jun  4 08:37 stderr.txt
[2025-06-04 08:37:18] HITS file was successfully produced:
[2025-06-04 08:37:18] -rw------- 1 boinc boinc 174217158 Jun  4 08:36 shared/HITS.pool.root.1
[2025-06-04 08:37:18]  *** Contents of shared directory: ***
[2025-06-04 08:37:18] total 382956
[2025-06-04 08:37:18] -rw-r--r-- 2 boinc boinc     15093 Jun  4 08:08 start_atlas.sh
[2025-06-04 08:37:18] -rw-r--r-- 2 boinc boinc    508880 Jun  4 08:08 input.tar.gz
[2025-06-04 08:37:18] -rw-r--r-- 2 boinc boinc 216833592 Jun  4 08:08 ATLAS.root_0
[2025-06-04 08:37:18] -rw------- 1 boinc boinc 174217158 Jun  4 08:36 HITS.pool.root.1
[2025-06-04 08:37:18] -rw------- 1 boinc boinc    563200 Jun  4 08:37 result.tar.gz
08:37:20 (28282): run_atlas exited; CPU time 17968.937214
08:37:20 (28282): called boinc_finish(0)

</stderr_txt>
]]>

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