Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:51:30 (41065): wrapper (7.7.26015): starting
05:51:30 (41065): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:51:30] Arguments: --nthreads 8
[2025-06-04 05:51:30] Threads: 8
[2025-06-04 05:51:30] Checking for CVMFS
[2025-06-04 05:51:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:51:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:51:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:51:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:51:31] 2.11.2.0 4905 2614 72268 146775 0 187 16255870 18432001 3138 130560 0 8240596 99.997 638776 43739 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 05:51:31] CVMFS is ok
[2025-06-04 05:51:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:51:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:51:31] Further information can be found at the LHC@home message board.
[2025-06-04 05:51:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:51:31] Checking for apptainer binary...
[2025-06-04 05:51:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:51:31] Running /usr/bin/apptainer --version
[2025-06-04 05:51:31] apptainer version 1.3.2-1.el7
[2025-06-04 05:51:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:51:31] c-211-32.aglt2.org
[2025-06-04 05:51:31] apptainer works
[2025-06-04 05:51:31] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:51:31] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:51:31] Starting ATLAS job with PandaID=6678392133
[2025-06-04 05:51:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:18:02]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:18:02] 2025-06-04 12:17:42,020 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:18:02] 2025-06-04 12:17:42,020 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:18:02] 2025-06-04 12:17:42,022 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:18:02] 2025-06-04 12:17:42,022 | INFO     | sum of square deviations: 925859220.0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,023 | INFO     | sum of deviations: 14712826344.500006
[2025-06-04 08:18:02] 2025-06-04 12:17:42,023 | INFO     | mean x: 1749035086.5
[2025-06-04 08:18:02] 2025-06-04 12:17:42,023 | INFO     | mean y: 2460101.0069444445
[2025-06-04 08:18:02] 2025-06-04 12:17:42,023 | INFO     | -- intersect: -27791451697.065388
[2025-06-04 08:18:02] 2025-06-04 12:17:42,023 | INFO     | intersect: -27791451697.065388
[2025-06-04 08:18:02] 2025-06-04 12:17:42,024 | INFO     | chi2: 2.188439464962887
[2025-06-04 08:18:02] 2025-06-04 12:17:42,024 | INFO     | sum of square deviations: 832722590.0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,024 | INFO     | sum of deviations: 23717079807.000004
[2025-06-04 08:18:02] 2025-06-04 12:17:42,024 | INFO     | mean x: 1749034934.0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,025 | INFO     | mean y: 2474387.201438849
[2025-06-04 08:18:02] 2025-06-04 12:17:42,025 | INFO     | -- intersect: -49812435899.919495
[2025-06-04 08:18:02] 2025-06-04 12:17:42,025 | INFO     | intersect: -49812435899.919495
[2025-06-04 08:18:02] 2025-06-04 12:17:42,025 | INFO     | chi2: 1.3542011707723158
[2025-06-04 08:18:02] 2025-06-04 12:17:42,025 | INFO     | current chi2=1.3542011707723158 (change=38.120236248102884 %)
[2025-06-04 08:18:02] 2025-06-04 12:17:42,025 | INFO     | sum of square deviations: 746051197.5
[2025-06-04 08:18:02] 2025-06-04 12:17:42,026 | INFO     | sum of deviations: 22613973405.499996
[2025-06-04 08:18:02] 2025-06-04 12:17:42,026 | INFO     | mean x: 1749034781.5
[2025-06-04 08:18:02] 2025-06-04 12:17:42,026 | INFO     | mean y: 2472445.4402985075
[2025-06-04 08:18:02] 2025-06-04 12:17:42,026 | INFO     | -- intersect: -53013495046.70422
[2025-06-04 08:18:02] 2025-06-04 12:17:42,026 | INFO     | intersect: -53013495046.70422
[2025-06-04 08:18:02] 2025-06-04 12:17:42,026 | INFO     | chi2: 1.355252536780492
[2025-06-04 08:18:02] 2025-06-04 12:17:42,026 | INFO     | current chi2=1.355252536780492 (change=-0.07763735779201246 %)
[2025-06-04 08:18:02] 2025-06-04 12:17:42,027 | INFO     | right removable region: 133
[2025-06-04 08:18:02] 2025-06-04 12:17:42,027 | INFO     | sum of square deviations: 832722590.0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,027 | INFO     | sum of deviations: -6391761292.0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,027 | INFO     | mean x: 1749035239.0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,027 | INFO     | mean y: 2494155.0863309354
[2025-06-04 08:18:02] 2025-06-04 12:17:42,028 | INFO     | -- intersect: 13427632218.152649
[2025-06-04 08:18:02] 2025-06-04 12:17:42,028 | INFO     | intersect: 13427632218.152649
[2025-06-04 08:18:02] 2025-06-04 12:17:42,028 | INFO     | chi2: 0.8799483682833725
[2025-06-04 08:18:02] 2025-06-04 12:17:42,028 | INFO     | current chi2=0.8799483682833725 (change=59.791057400881996 %)
[2025-06-04 08:18:02] 2025-06-04 12:17:42,028 | INFO     | sum of square deviations: 746051197.5
[2025-06-04 08:18:02] 2025-06-04 12:17:42,029 | INFO     | sum of deviations: -7846416274.999999
[2025-06-04 08:18:02] 2025-06-04 12:17:42,029 | INFO     | mean x: 1749035391.5
[2025-06-04 08:18:02] 2025-06-04 12:17:42,029 | INFO     | mean y: 2496646.7014925373
[2025-06-04 08:18:02] 2025-06-04 12:17:42,029 | INFO     | -- intersect: 18397560963.20451
[2025-06-04 08:18:02] 2025-06-04 12:17:42,029 | INFO     | intersect: 18397560963.20451
[2025-06-04 08:18:02] 2025-06-04 12:17:42,029 | INFO     | chi2: 0.8656827075340102
[2025-06-04 08:18:02] 2025-06-04 12:17:42,029 | INFO     | current chi2=0.8656827075340102 (change=1.6211929317162268 %)
[2025-06-04 08:18:02] 2025-06-04 12:17:42,030 | INFO     | left removable region: 20
[2025-06-04 08:18:02] 2025-06-04 12:17:42,030 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,030 | INFO     | sum of deviations: 1657814751.0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,030 | INFO     | mean x: 1749035361.0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,030 | INFO     | mean y: 2511200.9380530976
[2025-06-04 08:18:02] 2025-06-04 12:17:42,030 | INFO     | -- intersect: -6478680213.58227
[2025-06-04 08:18:02] 2025-06-04 12:17:42,031 | INFO     | intersect: -6478680213.58227
[2025-06-04 08:18:02] 2025-06-04 12:17:42,031 | INFO     | chi2: 0.001847514733963039
[2025-06-04 08:18:02] 2025-06-04 12:17:42,031 | INFO     | -- intersect: -6478680213.58227
[2025-06-04 08:18:02] 2025-06-04 12:17:42,031 | INFO     | current memory leak: 3.71 B/s (using 113 data points, chi2=0.00)
[2025-06-04 08:18:02] 2025-06-04 12:17:42,031 | INFO     | ..............................
[2025-06-04 08:18:02] 2025-06-04 12:17:42,031 | INFO     | . Timing measurements:
[2025-06-04 08:18:02] 2025-06-04 12:17:42,031 | INFO     | . get job = 0 s
[2025-06-04 08:18:02] 2025-06-04 12:17:42,032 | INFO     | . initial setup = 2 s
[2025-06-04 08:18:02] 2025-06-04 12:17:42,032 | INFO     | . payload setup = 5 s
[2025-06-04 08:18:02] 2025-06-04 12:17:42,032 | INFO     | . stage-in = 0 s
[2025-06-04 08:18:02] 2025-06-04 12:17:42,032 | INFO     | . payload execution = 8731 s
[2025-06-04 08:18:02] 2025-06-04 12:17:42,032 | INFO     | . stage-out = 0 s
[2025-06-04 08:18:02] 2025-06-04 12:17:42,032 | INFO     | . log creation = 0 s
[2025-06-04 08:18:02] 2025-06-04 12:17:42,032 | INFO     | ..............................
[2025-06-04 08:18:02] 2025-06-04 12:17:42,524 | INFO     | 
[2025-06-04 08:18:02] 2025-06-04 12:17:42,524 | INFO     | job summary report
[2025-06-04 08:18:02] 2025-06-04 12:17:42,524 | INFO     | --------------------------------------------------
[2025-06-04 08:18:02] 2025-06-04 12:17:42,525 | INFO     | PanDA job id: 6678392133
[2025-06-04 08:18:02] 2025-06-04 12:17:42,525 | INFO     | task id: 45006595
[2025-06-04 08:18:02] 2025-06-04 12:17:42,525 | INFO     | errors: (none)
[2025-06-04 08:18:02] 2025-06-04 12:17:42,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:18:02] 2025-06-04 12:17:42,525 | INFO     | pilot state: finished 
[2025-06-04 08:18:02] 2025-06-04 12:17:42,525 | INFO     | transexitcode: 0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,526 | INFO     | exeerrorcode: 0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,526 | INFO     | exeerrordiag: 
[2025-06-04 08:18:02] 2025-06-04 12:17:42,526 | INFO     | exitcode: 0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,526 | INFO     | exitmsg: OK
[2025-06-04 08:18:02] 2025-06-04 12:17:42,526 | INFO     | cpuconsumptiontime: 65546 s
[2025-06-04 08:18:02] 2025-06-04 12:17:42,526 | INFO     | nevents: 400
[2025-06-04 08:18:02] 2025-06-04 12:17:42,526 | INFO     | neventsw: 0
[2025-06-04 08:18:02] 2025-06-04 12:17:42,526 | INFO     | pid: 5204
[2025-06-04 08:18:02] 2025-06-04 12:17:42,526 | INFO     | pgrp: 5204
[2025-06-04 08:18:02] 2025-06-04 12:17:42,527 | INFO     | corecount: 8
[2025-06-04 08:18:02] 2025-06-04 12:17:42,527 | INFO     | event service: False
[2025-06-04 08:18:02] 2025-06-04 12:17:42,527 | INFO     | sizes: {0: 2404356, 1: 2405212, 4: 2405418, 12: 2405446, 8737: 2433282, 8738: 2442223, 8741: 2442407, 8747: 2442577}
[2025-06-04 08:18:02] 2025-06-04 12:17:42,527 | INFO     | --------------------------------------------------
[2025-06-04 08:18:02] 2025-06-04 12:17:42,527 | INFO     | 
[2025-06-04 08:18:02] 2025-06-04 12:17:42,527 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-04 08:18:02] 2025-06-04 12:17:42,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:18:02] 2025-06-04 12:17:42,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:18:02] 2025-06-04 12:17:42,548 | INFO     | job 6678392133 has completed (purged errors)
[2025-06-04 08:18:02] 2025-06-04 12:17:42,548 | INFO     | overall cleanup function is called
[2025-06-04 08:18:02] 2025-06-04 12:17:43,554 | INFO     | --- collectZombieJob: --- 10, [5204]
[2025-06-04 08:18:02] 2025-06-04 12:17:43,555 | INFO     | zombie collector waiting for pid 5204
[2025-06-04 08:18:02] 2025-06-04 12:17:43,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:18:02] 2025-06-04 12:17:43,555 | INFO     | collected zombie processes
[2025-06-04 08:18:02] 2025-06-04 12:17:43,555 | INFO     | will attempt to kill all subprocesses of pid=5204
[2025-06-04 08:18:02] 2025-06-04 12:17:43,738 | INFO     | process IDs to be killed: [5204] (in reverse order)
[2025-06-04 08:18:02] 2025-06-04 12:17:43,806 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:18:02] 2025-06-04 12:17:43,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:18:02] 2025-06-04 12:17:43,814 | INFO     | did not find any defunct processes belonging to 5204
[2025-06-04 08:18:02] 2025-06-04 12:17:43,821 | INFO     | did not find any defunct processes belonging to 5204
[2025-06-04 08:18:02] 2025-06-04 12:17:43,821 | INFO     | ready for new job
[2025-06-04 08:18:02] 2025-06-04 12:17:43,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:18:02] 2025-06-04 12:17:43,823 | INFO     | **************************************
[2025-06-04 08:18:02] 2025-06-04 12:17:43,823 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:18:02] 2025-06-04 12:17:43,823 | INFO     | **************************************
[2025-06-04 08:18:02] 2025-06-04 12:17:43,823 | INFO     | 
[2025-06-04 08:18:02] 2025-06-04 12:17:43,826 | INFO     | architecture information:
[2025-06-04 08:18:02] 2025-06-04 12:17:43,826 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:18:02] 2025-06-04 12:17:43,837 | INFO     | cat /etc/os-release:
[2025-06-04 08:18:02] NAME="CentOS Linux"
[2025-06-04 08:18:02] VERSION="7 (Core)"
[2025-06-04 08:18:02] ID="centos"
[2025-06-04 08:18:02] ID_LIKE="rhel fedora"
[2025-06-04 08:18:02] VERSION_ID="7"
[2025-06-04 08:18:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:18:02] ANSI_COLOR="0;31"
[2025-06-04 08:18:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:18:02] HOME_URL="https://www.centos.org/"
[2025-06-04 08:18:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:18:02] 
[2025-06-04 08:18:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:18:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:18:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:18:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:18:02] 
[2025-06-04 08:18:02] 2025-06-04 12:17:43,837 | INFO     | **************************************
[2025-06-04 08:18:02] 2025-06-04 12:17:44,339 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-04 08:18:02] 2025-06-04 12:17:44,350 | INFO     | sufficient remaining disk space (55385784320 B)
[2025-06-04 08:18:02] 2025-06-04 12:17:44,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:18:02] 2025-06-04 12:17:44,351 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:18:02] 2025-06-04 12:17:44,351 | INFO     | update_server=False
[2025-06-04 08:18:02] 2025-06-04 12:17:44,351 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:18:02] 2025-06-04 12:17:44,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:18:02] 2025-06-04 12:17:44,840 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:18:02] 2025-06-04 12:17:44,840 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:18:02] 2025-06-04 12:17:44,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:18:02] 2025-06-04 12:17:44,841 | INFO     | will abort loop
[2025-06-04 08:18:02] 2025-06-04 12:17:45,013 | INFO     | all data control threads have been joined
[2025-06-04 08:18:02] 2025-06-04 12:17:45,313 | INFO     | all payload control threads have been joined
[2025-06-04 08:18:02] 2025-06-04 12:17:45,344 | INFO     | PID=44639 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 08:18:02] 2025-06-04 12:17:45,345 | INFO     | .. there are 5 such processes running
[2025-06-04 08:18:02] 2025-06-04 12:17:45,345 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:18:02] 2025-06-04 12:17:45,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:18:02] 2025-06-04 12:17:45,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:18:02] 2025-06-04 12:17:45,356 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:45,379 | INFO     | [job] validate thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:45,390 | INFO     | all job control threads have been joined
[2025-06-04 08:18:02] 2025-06-04 12:17:45,520 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:45,732 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:45,845 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:45,912 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:46,018 | INFO     | [data] control thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:46,318 | INFO     | [payload] control thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:46,357 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:46,395 | INFO     | [job] control thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:46,544 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:46,704 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:46,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:18:02] 2025-06-04 12:17:46,814 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:47,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:18:02] 2025-06-04 12:17:48,114 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:50,711 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:54,641 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:18:02] 2025-06-04 12:17:55,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:18:02] 2025-06-04 12:17:57,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140323093452608)>', '<ExcThread(monitor, started 140322654893824)>']
[2025-06-04 08:18:02] 2025-06-04 12:17:57,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:18:02] 2025-06-04 12:17:57,408 | INFO     | [monitor] control thread has ended
[2025-06-04 08:18:02] 2025-06-04 12:18:02,389 | INFO     | all workflow threads have been joined
[2025-06-04 08:18:02] 2025-06-04 12:18:02,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:18:02] 2025-06-04 12:18:02,389 | INFO     | traces error code: 0
[2025-06-04 08:18:02] 2025-06-04 12:18:02,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:18:02] 2025-06-04 12:18:02,457 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:18:02] 2025-06-04 12:18:02,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:18:02] 2025-06-04 12:18:02,461 [wrapper] pilotpid: 44639
[2025-06-04 08:18:02] 2025-06-04 12:18:02,464 [wrapper] Pilot exit status: 0
[2025-06-04 08:18:02] 2025-06-04 12:18:02,471 [wrapper] pandaids: 6678392133
[2025-06-04 08:18:02] 2025-06-04 12:18:02,505 [wrapper] cleanup supervisor_pilot 18253 44640
[2025-06-04 08:18:02] 2025-06-04 12:18:02,507 [wrapper] Test setup, not cleaning
[2025-06-04 08:18:02] 2025-06-04 12:18:02,509 [wrapper] apfmon messages muted
[2025-06-04 08:18:02] 2025-06-04 12:18:02,511 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:18:02] 2025-06-04 12:18:02,513 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:18:02]  *** Error codes and diagnostics ***
[2025-06-04 08:18:02]     "exeErrorCode": 0,
[2025-06-04 08:18:02]     "exeErrorDiag": "",
[2025-06-04 08:18:02]     "pilotErrorCode": 0,
[2025-06-04 08:18:02]     "pilotErrorDiag": "",
[2025-06-04 08:18:02]  *** Listing of results directory ***
[2025-06-04 08:18:02] total 392168
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:34 queuedata.json
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 08:18:02] -rwx------ 1 boincer umatlas     37140 Jun  4 03:36 runpilot2-wrapper.sh
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas       100 Jun  4 05:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:18:02] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 05:51 run_atlas
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas       105 Jun  4 05:51 job.xml
[2025-06-04 08:18:02] -rw-r--r-- 2 boincer umatlas 213379142 Jun  4 05:51 EVNT.45006593._002207.pool.root.1
[2025-06-04 08:18:02] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:51 start_atlas.sh
[2025-06-04 08:18:02] drwxrwx--x 2 boincer umatlas      4096 Jun  4 05:51 shared
[2025-06-04 08:18:02] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 05:51 input.tar.gz
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas         0 Jun  4 05:51 boinc_lockfile
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 05:51 pandaJob.out
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas    986766 Jun  4 05:51 agis_schedconf.cvmfs.json
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas   1603667 Jun  4 05:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:18:02] drwx------ 4 boincer umatlas      4096 Jun  4 05:51 pilot3
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas      6033 Jun  4 08:13 init_data.xml
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas 182071346 Jun  4 08:17 HITS.45006595._055162.pool.root.1
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas       529 Jun  4 08:17 boinc_task_state.xml
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas        95 Jun  4 08:17 pilot_heartbeat.json
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas      1046 Jun  4 08:17 memory_monitor_summary.json
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas    342163 Jun  4 08:17 log.45006595._055162.job.log.tgz.1
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas      7724 Jun  4 08:17 heartbeat.json
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas        27 Jun  4 08:18 wrapper_checkpoint.txt
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:18 boinc_mmap_file
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas      5004 Jun  4 08:18 pilotlog.txt
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas    805984 Jun  4 08:18 log.45006595._055162.job.log.1
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas       357 Jun  4 08:18 output.list
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:18 runtime_log
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas   1167360 Jun  4 08:18 result.tar.gz
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 08:18 runtime_log.err
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas       657 Jun  4 08:18 a2FODmIrxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNenKDmQzjDmm.diag
[2025-06-04 08:18:02] -rw-r--r-- 1 boincer umatlas     20855 Jun  4 08:18 stderr.txt
[2025-06-04 08:18:02] HITS file was successfully produced:
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas 182071346 Jun  4 08:17 shared/HITS.pool.root.1
[2025-06-04 08:18:02]  *** Contents of shared directory: ***
[2025-06-04 08:18:02] total 387848
[2025-06-04 08:18:02] -rw-r--r-- 2 boincer umatlas 213379142 Jun  4 05:51 ATLAS.root_0
[2025-06-04 08:18:02] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:51 start_atlas.sh
[2025-06-04 08:18:02] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 05:51 input.tar.gz
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas 182071346 Jun  4 08:17 HITS.pool.root.1
[2025-06-04 08:18:02] -rw------- 1 boincer umatlas   1167360 Jun  4 08:18 result.tar.gz
08:18:04 (41065): run_atlas exited; CPU time 65775.831383
08:18:04 (41065): called boinc_finish(0)

</stderr_txt>
]]>

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