Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:52:05 (1502031): wrapper (7.7.26015): starting
05:52:05 (1502031): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 05:52:05] Arguments: --nthreads 10
[2025-06-04 05:52:05] Threads: 10
[2025-06-04 05:52:05] Checking for CVMFS
[2025-06-04 05:52:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:52:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:52:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:52:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:52:05] 2.12.6.0 650483 23613 249984 146775 2 287 19762551 32935936 13682 16776704 0 80072645 99.498 99735727 30835 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 05:52:05] CVMFS is ok
[2025-06-04 05:52:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:52:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:52:05] Further information can be found at the LHC@home message board.
[2025-06-04 05:52:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:52:05] Checking for apptainer binary...
[2025-06-04 05:52:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:52:05] Running /usr/bin/apptainer --version
[2025-06-04 05:52:06] apptainer version 1.4.1-1.el9
[2025-06-04 05:52:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:52:06] c-4-36.aglt2.org
[2025-06-04 05:52:06] apptainer works
[2025-06-04 05:52:06] Set ATHENA_PROC_NUMBER=10
[2025-06-04 05:52:06] Set ATHENA_CORE_NUMBER=10
[2025-06-04 05:52:06] Starting ATLAS job with PandaID=6678392114
[2025-06-04 05:52:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:14:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:14:30]  status=None
[2025-06-04 07:14:30]  status_code=0
[2025-06-04 07:14:30]  storage_token=
[2025-06-04 07:14:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678392114/log.45006595._055143.job.log.tgz.1
[2025-06-04 07:14:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/9d/log.45006595._055143.job.log.tgz.1
[2025-06-04 07:14:30]  workdir=None
[2025-06-04 07:14:30] ]
[2025-06-04 07:14:30] 2025-06-04 11:14:03,281 | INFO     | transferring file log.45006595._055143.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678392114/log.45006595._055143.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:14:30] 2025-06-04 11:14:03,281 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678392114/log.45006595._055143.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055143.job
[2025-06-04 07:14:30] 2025-06-04 11:14:03,299 | INFO     | adding to output.list: log.45006595._055143.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/9d/log.45006595._055143.job.log.tg
[2025-06-04 07:14:30] 2025-06-04 11:14:03,300 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:14:30] 2025-06-04 11:14:03,300 | INFO     | summary of transferred files:
[2025-06-04 07:14:30] 2025-06-04 11:14:03,300 | INFO     |  -- lfn=log.45006595._055143.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:14:30] 2025-06-04 11:14:03,301 | INFO     | stage-out finished correctly
[2025-06-04 07:14:30] 2025-06-04 11:14:04,253 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:14:30] 2025-06-04 11:14:07,198 | INFO     | job 6678392114 has state=finished
[2025-06-04 07:14:30] 2025-06-04 11:14:07,198 | INFO     | preparing for final server update for job 6678392114 in state='finished'
[2025-06-04 07:14:30] 2025-06-04 11:14:07,199 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:14:30] 2025-06-04 11:14:07,199 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:14:30] 2025-06-04 11:14:07,199 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:14:30] 2025-06-04 11:14:07,199 | INFO     | job 6678392114 has finished - writing final server update
[2025-06-04 07:14:30] 2025-06-04 11:14:07,200 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:14:30] 2025-06-04 11:14:07,214 | INFO     | executing command: lscpu
[2025-06-04 07:14:30] 2025-06-04 11:14:07,285 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:14:30] 2025-06-04 11:14:07,976 | WARNING  | process 1514016 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:14:30] 2025-06-04 11:14:07,977 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392114/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:14:30] 2025-06-04 11:14:07,978 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392114/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:14:30] 2025-06-04 11:14:07,979 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3948872 B
[2025-06-04 07:14:30] 2025-06-04 11:14:07,979 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16028 B
[2025-06-04 07:14:30] 2025-06-04 11:14:07,979 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:14:30] 2025-06-04 11:14:11,403 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:14:30] 2025-06-04 11:14:11,404 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392114/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:14:30] 2025-06-04 11:14:11,410 | INFO     | extracted standard info from prmon json
[2025-06-04 07:14:30] 2025-06-04 11:14:11,411 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:14:30] 2025-06-04 11:14:11,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:14:30] 2025-06-04 11:14:11,412 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:14:30] 2025-06-04 11:14:11,412 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:14:30] 2025-06-04 11:14:11,415 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:14:30] 2025-06-04 11:14:11,415 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 07:14:30] 2025-06-04 11:14:11,416 | INFO     | sum of deviations: 1897373890.0000007
[2025-06-04 07:14:30] 2025-06-04 11:14:11,416 | INFO     | mean x: 1749033264.0
[2025-06-04 07:14:30] 2025-06-04 11:14:11,416 | INFO     | mean y: 2376906.0684931506
[2025-06-04 07:14:30] 2025-06-04 11:14:11,416 | INFO     | -- intersect: -27513635009.046623
[2025-06-04 07:14:30] 2025-06-04 11:14:11,416 | INFO     | intersect: -27513635009.046623
[2025-06-04 07:14:30] 2025-06-04 11:14:11,416 | INFO     | chi2: 0.9593595589315292
[2025-06-04 07:14:30] 2025-06-04 11:14:11,416 | INFO     | -- intersect: -27513635009.046623
[2025-06-04 07:14:30] 2025-06-04 11:14:11,417 | INFO     | current memory leak: 15.73 B/s (using 73 data points, chi2=0.96)
[2025-06-04 07:14:30] 2025-06-04 11:14:11,417 | INFO     | ..............................
[2025-06-04 07:14:30] 2025-06-04 11:14:11,418 | INFO     | . Timing measurements:
[2025-06-04 07:14:30] 2025-06-04 11:14:11,418 | INFO     | sufficient remaining disk space (76514590720 B)
[2025-06-04 07:14:30] 2025-06-04 11:14:11,418 | INFO     | . get job = 0 s
[2025-06-04 07:14:30] 2025-06-04 11:14:11,418 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 07:14:30] 2025-06-04 11:14:11,419 | INFO     | . initial setup = 2 s
[2025-06-04 07:14:30] 2025-06-04 11:14:11,419 | INFO     | . payload setup = 7 s
[2025-06-04 07:14:30] 2025-06-04 11:14:11,419 | INFO     | . stage-in = 0 s
[2025-06-04 07:14:30] 2025-06-04 11:14:11,419 | INFO     | . payload execution = 4880 s
[2025-06-04 07:14:30] 2025-06-04 11:14:11,419 | INFO     | . stage-out = 0 s
[2025-06-04 07:14:30] 2025-06-04 11:14:11,420 | INFO     | . log creation = 0 s
[2025-06-04 07:14:30] 2025-06-04 11:14:11,420 | INFO     | ..............................
[2025-06-04 07:14:30] 2025-06-04 11:14:11,431 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6678392114: 4249478 B (within 2537553920 B limit)
[2025-06-04 07:14:30] 2025-06-04 11:14:11,452 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678392114/HITS.45006595._055143.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 07:14:30] 2025-06-04 11:14:11,463 | INFO     | total size of present files: 0 B (workdir size: 4249478 B)
[2025-06-04 07:14:30] 2025-06-04 11:14:11,478 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678392114/HITS.45006595._055143.pool.root.1 since it does not exist
[2025-06-04 07:14:30] 2025-06-04 11:14:11,529 | INFO     | 
[2025-06-04 07:14:30] 2025-06-04 11:14:11,530 | INFO     | job summary report
[2025-06-04 07:14:30] 2025-06-04 11:14:11,530 | INFO     | --------------------------------------------------
[2025-06-04 07:14:30] 2025-06-04 11:14:11,530 | INFO     | PanDA job id: 6678392114
[2025-06-04 07:14:30] 2025-06-04 11:14:11,530 | INFO     | task id: 45006595
[2025-06-04 07:14:30] 2025-06-04 11:14:11,530 | INFO     | errors: (none)
[2025-06-04 07:14:30] 2025-06-04 11:14:11,530 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:14:30] 2025-06-04 11:14:11,530 | INFO     | pilot state: finished 
[2025-06-04 07:14:30] 2025-06-04 11:14:11,531 | INFO     | transexitcode: 0
[2025-06-04 07:14:30] 2025-06-04 11:14:11,531 | INFO     | exeerrorcode: 0
[2025-06-04 07:14:30] 2025-06-04 11:14:11,531 | INFO     | exeerrordiag: 
[2025-06-04 07:14:30] 2025-06-04 11:14:11,531 | INFO     | exitcode: 0
[2025-06-04 07:14:30] 2025-06-04 11:14:11,531 | INFO     | exitmsg: OK
[2025-06-04 07:14:30] 2025-06-04 11:14:11,531 | INFO     | cpuconsumptiontime: 41689 s
[2025-06-04 07:14:30] 2025-06-04 11:14:11,531 | INFO     | nevents: 400
[2025-06-04 07:14:30] 2025-06-04 11:14:11,532 | INFO     | neventsw: 0
[2025-06-04 07:14:30] 2025-06-04 11:14:11,532 | INFO     | pid: 1514016
[2025-06-04 07:14:30] 2025-06-04 11:14:11,532 | INFO     | pgrp: 1514016
[2025-06-04 07:14:30] 2025-06-04 11:14:11,532 | INFO     | corecount: 10
[2025-06-04 07:14:30] 2025-06-04 11:14:11,532 | INFO     | event service: False
[2025-06-04 07:14:30] 2025-06-04 11:14:11,532 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 4890: 2431473, 4891: 2440414, 4892: 2440598, 4899: 2440796}
[2025-06-04 07:14:30] 2025-06-04 11:14:11,532 | INFO     | --------------------------------------------------
[2025-06-04 07:14:30] 2025-06-04 11:14:11,533 | INFO     | 
[2025-06-04 07:14:30] 2025-06-04 11:14:11,533 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:14:30] 2025-06-04 11:14:11,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,553 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,553 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,554 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:14:30] 2025-06-04 11:14:11,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:14:30] 2025-06-04 11:14:11,557 | INFO     | job 6678392114 has completed (purged errors)
[2025-06-04 07:14:30] 2025-06-04 11:14:11,557 | INFO     | overall cleanup function is called
[2025-06-04 07:14:30] 2025-06-04 11:14:11,882 | INFO     | number of running child processes to parent process 1514016: 1
[2025-06-04 07:14:30] 2025-06-04 11:14:11,883 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:14:30] 2025-06-04 11:14:11,883 | INFO     | aborting job monitoring since job object (job id=6678392114) has expired
[2025-06-04 07:14:30] 2025-06-04 11:14:12,563 | INFO     | --- collectZombieJob: --- 10, [1514016]
[2025-06-04 07:14:30] 2025-06-04 11:14:12,564 | INFO     | zombie collector waiting for pid 1514016
[2025-06-04 07:14:30] 2025-06-04 11:14:12,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:14:30] 2025-06-04 11:14:12,564 | INFO     | collected zombie processes
[2025-06-04 07:14:30] 2025-06-04 11:14:12,564 | INFO     | will attempt to kill all subprocesses of pid=1514016
[2025-06-04 07:14:30] 2025-06-04 11:14:12,910 | INFO     | process IDs to be killed: [1514016] (in reverse order)
[2025-06-04 07:14:30] 2025-06-04 11:14:13,002 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:14:30] 2025-06-04 11:14:13,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:14:30] 2025-06-04 11:14:13,015 | INFO     | did not find any defunct processes belonging to 1514016
[2025-06-04 07:14:30] 2025-06-04 11:14:13,028 | INFO     | did not find any defunct processes belonging to 1514016
[2025-06-04 07:14:30] 2025-06-04 11:14:13,028 | INFO     | ready for new job
[2025-06-04 07:14:30] 2025-06-04 11:14:13,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:14:30] 2025-06-04 11:14:13,030 | INFO     | **************************************
[2025-06-04 07:14:30] 2025-06-04 11:14:13,031 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:14:30] 2025-06-04 11:14:13,031 | INFO     | **************************************
[2025-06-04 07:14:30] 2025-06-04 11:14:13,031 | INFO     | 
[2025-06-04 07:14:30] 2025-06-04 11:14:13,045 | INFO     | architecture information:
[2025-06-04 07:14:30] 2025-06-04 11:14:13,045 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:14:30] 2025-06-04 11:14:13,062 | INFO     | cat /etc/os-release:
[2025-06-04 07:14:30] NAME="CentOS Linux"
[2025-06-04 07:14:30] VERSION="7 (Core)"
[2025-06-04 07:14:30] ID="centos"
[2025-06-04 07:14:30] ID_LIKE="rhel fedora"
[2025-06-04 07:14:30] VERSION_ID="7"
[2025-06-04 07:14:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:14:30] ANSI_COLOR="0;31"
[2025-06-04 07:14:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:14:30] HOME_URL="https://www.centos.org/"
[2025-06-04 07:14:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:14:30] 
[2025-06-04 07:14:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:14:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:14:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:14:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:14:30] 
[2025-06-04 07:14:30] 2025-06-04 11:14:13,062 | INFO     | **************************************
[2025-06-04 07:14:30] 2025-06-04 11:14:13,565 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:14:30] 2025-06-04 11:14:13,581 | INFO     | sufficient remaining disk space (76519833600 B)
[2025-06-04 07:14:30] 2025-06-04 11:14:13,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:14:30] 2025-06-04 11:14:13,582 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:14:30] 2025-06-04 11:14:13,582 | INFO     | update_server=False
[2025-06-04 07:14:30] 2025-06-04 11:14:13,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:14:30] 2025-06-04 11:14:13,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:14:30] 2025-06-04 11:14:13,583 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:14:30] 2025-06-04 11:14:13,583 | INFO     | aborting loop
[2025-06-04 07:14:30] 2025-06-04 11:14:13,583 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:14:30] 2025-06-04 11:14:13,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:14:30] 2025-06-04 11:14:13,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:14:30] 2025-06-04 11:14:13,736 | INFO     | all data control threads have been joined
[2025-06-04 07:14:30] 2025-06-04 11:14:13,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:14:30] 2025-06-04 11:14:14,012 | INFO     | all payload control threads have been joined
[2025-06-04 07:14:30] 2025-06-04 11:14:14,587 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:14,588 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:14,589 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:14,708 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:14,741 | INFO     | [data] control thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:14,809 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:14,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:14:30] 2025-06-04 11:14:14,879 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:15,018 | INFO     | [payload] control thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:15,110 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:15,230 | INFO     | all job control threads have been joined
[2025-06-04 07:14:30] 2025-06-04 11:14:15,294 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:15,914 | INFO     | [job] validate thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:15,919 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:16,235 | INFO     | [job] control thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:16,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:14:30] 2025-06-04 11:14:17,543 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:18,872 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:23,766 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:14:30] 2025-06-04 11:14:24,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:14:30] 2025-06-04 11:14:24,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507706271552)>', '<ExcThread(monitor, started 140506625468160)>']
[2025-06-04 07:14:30] 2025-06-04 11:14:25,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:14:30] 2025-06-04 11:14:25,632 | INFO     | [monitor] control thread has ended
[2025-06-04 07:14:30] 2025-06-04 11:14:29,912 | INFO     | all workflow threads have been joined
[2025-06-04 07:14:30] 2025-06-04 11:14:29,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:14:30] 2025-06-04 11:14:29,913 | INFO     | traces error code: 0
[2025-06-04 07:14:30] 2025-06-04 11:14:29,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:14:30] 2025-06-04 11:14:30,071 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:14:30] 2025-06-04 11:14:30,074 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:14:30] 2025-06-04 11:14:30,078 [wrapper] pilotpid: 1505617
[2025-06-04 07:14:30] 2025-06-04 11:14:30,081 [wrapper] Pilot exit status: 0
[2025-06-04 07:14:30] 2025-06-04 11:14:30,091 [wrapper] pandaids: 6678392114
[2025-06-04 07:14:30] 2025-06-04 11:14:30,155 [wrapper] cleanup supervisor_pilot 1935862 1505618
[2025-06-04 07:14:30] 2025-06-04 11:14:30,158 [wrapper] Test setup, not cleaning
[2025-06-04 07:14:30] 2025-06-04 11:14:30,162 [wrapper] apfmon messages muted
[2025-06-04 07:14:30] 2025-06-04 11:14:30,165 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:14:30] 2025-06-04 11:14:30,167 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:14:30]  *** Error codes and diagnostics ***
[2025-06-04 07:14:30]     "exeErrorCode": 0,
[2025-06-04 07:14:30]     "exeErrorDiag": "",
[2025-06-04 07:14:30]     "pilotErrorCode": 0,
[2025-06-04 07:14:30]     "pilotErrorDiag": "",
[2025-06-04 07:14:30]  *** Listing of results directory ***
[2025-06-04 07:14:30] total 386644
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:34 queuedata.json
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 07:14:30] -rwx------. 1 boincer umatlas     37140 Jun  4 03:36 runpilot2-wrapper.sh
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas       100 Jun  4 05:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:14:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 05:52 run_atlas
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas       105 Jun  4 05:52 job.xml
[2025-06-04 07:14:30] -rw-r--r--. 2 boincer umatlas 213495061 Jun  4 05:52 EVNT.45006593._002206.pool.root.1
[2025-06-04 07:14:30] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 05:52 input.tar.gz
[2025-06-04 07:14:30] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:52 start_atlas.sh
[2025-06-04 07:14:30] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 05:52 shared
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas         0 Jun  4 05:52 boinc_lockfile
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 05:52 pandaJob.out
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas    986766 Jun  4 05:52 agis_schedconf.cvmfs.json
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas   1603667 Jun  4 05:52 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:14:30] drwx------. 4 boincer umatlas      4096 Jun  4 05:52 pilot3
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas      6674 Jun  4 07:10 init_data.xml
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas 176951752 Jun  4 07:13 HITS.45006595._055143.pool.root.1
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas       529 Jun  4 07:13 boinc_task_state.xml
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas      1038 Jun  4 07:13 memory_monitor_summary.json
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas    344916 Jun  4 07:14 log.45006595._055143.job.log.tgz.1
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas        27 Jun  4 07:14 wrapper_checkpoint.txt
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 07:14 boinc_mmap_file
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas        95 Jun  4 07:14 pilot_heartbeat.json
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas      7718 Jun  4 07:14 heartbeat.json
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas      4548 Jun  4 07:14 pilotlog.txt
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas    476256 Jun  4 07:14 log.45006595._055143.job.log.1
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas       357 Jun  4 07:14 output.list
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas       620 Jun  4 07:14 runtime_log
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas    839680 Jun  4 07:14 result.tar.gz
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 07:14 runtime_log.err
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas       652 Jun  4 07:14 QTvNDmIrxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6dnKDmd1ORdn.diag
[2025-06-04 07:14:30] -rw-r--r--. 1 boincer umatlas     22244 Jun  4 07:14 stderr.txt
[2025-06-04 07:14:30] HITS file was successfully produced:
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas 176951752 Jun  4 07:13 shared/HITS.pool.root.1
[2025-06-04 07:14:30]  *** Contents of shared directory: ***
[2025-06-04 07:14:30] total 382640
[2025-06-04 07:14:30] -rw-r--r--. 2 boincer umatlas 213495061 Jun  4 05:52 ATLAS.root_0
[2025-06-04 07:14:30] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 05:52 input.tar.gz
[2025-06-04 07:14:30] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:52 start_atlas.sh
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas 176951752 Jun  4 07:13 HITS.pool.root.1
[2025-06-04 07:14:30] -rw-------. 1 boincer umatlas    839680 Jun  4 07:14 result.tar.gz
07:14:31 (1502031): run_atlas exited; CPU time 41863.204952
07:14:31 (1502031): called boinc_finish(0)

</stderr_txt>
]]>

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