Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:31:06 (1724794): wrapper (7.7.26015): starting
07:31:06 (1724794): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 07:31:06] Arguments: --nthreads 12
[2025-06-05 07:31:06] Threads: 12
[2025-06-05 07:31:06] Checking for CVMFS
[2025-06-05 07:31:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 07:31:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 07:31:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 07:31:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 07:31:07] 2.12.7.0 2502 2323 61048 146810 3 55 2997357 4096000 1002 130560 0 4754709 99.993 744506 123 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 07:31:07] CVMFS is ok
[2025-06-05 07:31:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:31:07] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 07:31:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 07:31:07] Further information can be found at the LHC@home message board.
[2025-06-05 07:31:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:31:07] Checking for apptainer binary...
[2025-06-05 07:31:07] apptainer is not installed, using version from CVMFS
[2025-06-05 07:31:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:31:07] ryzen4700s
[2025-06-05 07:31:07] apptainer works
[2025-06-05 07:31:07] Set ATHENA_PROC_NUMBER=12
[2025-06-05 07:31:07] Set ATHENA_CORE_NUMBER=12
[2025-06-05 07:31:07] Starting ATLAS job with PandaID=6678285622
[2025-06-05 07:31:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:27:45]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:27:45] 2025-06-05 09:27:22,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:27:45] 2025-06-05 09:27:23,113 | INFO     | PID=1728486 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 09:27:45] 2025-06-05 09:27:23,114 | INFO     | .. there are 3 such processes running
[2025-06-05 09:27:45] 2025-06-05 09:27:24,968 | INFO     | monitor loop #489: job 0:6678285622 is in state 'finished'
[2025-06-05 09:27:45] 2025-06-05 09:27:24,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:27:45] 2025-06-05 09:27:27,472 | INFO     | monitor loop #490: job 0:6678285622 is in state 'finished'
[2025-06-05 09:27:45] 2025-06-05 09:27:27,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 09:27:45] 2025-06-05 09:27:29,323 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 09:27:45] 2025-06-05 09:27:29,323 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6678285622/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:27:45] 2025-06-05 09:27:29,323 | INFO     | extracted standard info from prmon json
[2025-06-05 09:27:45] 2025-06-05 09:27:29,324 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:27:45] 2025-06-05 09:27:29,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:27:45] 2025-06-05 09:27:29,324 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:27:45] 2025-06-05 09:27:29,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:27:45] 2025-06-05 09:27:29,326 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:27:45] 2025-06-05 09:27:29,327 | INFO     | sum of square deviations: 447381322.92035353
[2025-06-05 09:27:45] 2025-06-05 09:27:29,327 | INFO     | sum of deviations: 7202779213.274333
[2025-06-05 09:27:45] 2025-06-05 09:27:29,327 | INFO     | mean x: 1749112117.0265486
[2025-06-05 09:27:45] 2025-06-05 09:27:29,327 | INFO     | mean y: 2674220.575221239
[2025-06-05 09:27:45] 2025-06-05 09:27:29,328 | INFO     | -- intersect: -28157795948.287792
[2025-06-05 09:27:45] 2025-06-05 09:27:29,328 | INFO     | intersect: -28157795948.287792
[2025-06-05 09:27:45] 2025-06-05 09:27:29,328 | INFO     | chi2: 1.2446864807768354
[2025-06-05 09:27:45] 2025-06-05 09:27:29,328 | INFO     | sum of square deviations: 390581172.91666734
[2025-06-05 09:27:45] 2025-06-05 09:27:29,329 | INFO     | sum of deviations: 6449464483.166669
[2025-06-05 09:27:45] 2025-06-05 09:27:29,329 | INFO     | mean x: 1749111964.5277777
[2025-06-05 09:27:45] 2025-06-05 09:27:29,329 | INFO     | mean y: 2672203.611111111
[2025-06-05 09:27:45] 2025-06-05 09:27:29,329 | INFO     | -- intersect: -28879507160.19199
[2025-06-05 09:27:45] 2025-06-05 09:27:29,329 | INFO     | intersect: -28879507160.19199
[2025-06-05 09:27:45] 2025-06-05 09:27:29,329 | INFO     | chi2: 1.2446853852970778
[2025-06-05 09:27:45] 2025-06-05 09:27:29,329 | INFO     | current chi2=1.2446853852970778 (change=8.801250551783947e-05 %)
[2025-06-05 09:27:45] 2025-06-05 09:27:29,329 | INFO     | right removable region: 107
[2025-06-05 09:27:45] 2025-06-05 09:27:29,330 | INFO     | sum of square deviations: 390579342.91666734
[2025-06-05 09:27:45] 2025-06-05 09:27:29,330 | INFO     | sum of deviations: -6694022769.499999
[2025-06-05 09:27:45] 2025-06-05 09:27:29,330 | INFO     | mean x: 1749112269.5277777
[2025-06-05 09:27:45] 2025-06-05 09:27:29,330 | INFO     | mean y: 2710494.1666666665
[2025-06-05 09:27:45] 2025-06-05 09:27:29,330 | INFO     | -- intersect: 29980223567.941463
[2025-06-05 09:27:45] 2025-06-05 09:27:29,330 | INFO     | intersect: 29980223567.941463
[2025-06-05 09:27:45] 2025-06-05 09:27:29,331 | INFO     | chi2: 0.026902935752369895
[2025-06-05 09:27:45] 2025-06-05 09:27:29,331 | INFO     | current chi2=0.026902935752369895 (change=97.83857733108991 %)
[2025-06-05 09:27:45] 2025-06-05 09:27:29,331 | INFO     | sum of square deviations: 338800712.9126208
[2025-06-05 09:27:45] 2025-06-05 09:27:29,331 | INFO     | sum of deviations: -5762587266.572815
[2025-06-05 09:27:45] 2025-06-05 09:27:29,332 | INFO     | mean x: 1749112422.0291262
[2025-06-05 09:27:45] 2025-06-05 09:27:29,332 | INFO     | mean y: 2707739.524271845
[2025-06-05 09:27:45] 2025-06-05 09:27:29,332 | INFO     | -- intersect: 29752978582.63473
[2025-06-05 09:27:45] 2025-06-05 09:27:29,332 | INFO     | intersect: 29752978582.63473
[2025-06-05 09:27:45] 2025-06-05 09:27:29,332 | INFO     | chi2: 0.02684055401141633
[2025-06-05 09:27:45] 2025-06-05 09:27:29,332 | INFO     | current chi2=0.02684055401141633 (change=0.2318770766423544 %)
[2025-06-05 09:27:45] 2025-06-05 09:27:29,332 | INFO     | left removable region: 20
[2025-06-05 09:27:45] 2025-06-05 09:27:29,332 | INFO     | sum of square deviations: 204159316.8965514
[2025-06-05 09:27:45] 2025-06-05 09:27:29,333 | INFO     | sum of deviations: -3386475921.1034484
[2025-06-05 09:27:45] 2025-06-05 09:27:29,333 | INFO     | mean x: 1749112544.0344827
[2025-06-05 09:27:45] 2025-06-05 09:27:29,333 | INFO     | mean y: 2697735.367816092
[2025-06-05 09:27:45] 2025-06-05 09:27:29,333 | INFO     | -- intersect: 29015958573.589333
[2025-06-05 09:27:45] 2025-06-05 09:27:29,333 | INFO     | intersect: 29015958573.589333
[2025-06-05 09:27:45] 2025-06-05 09:27:29,333 | INFO     | chi2: 0.020969925917264088
[2025-06-05 09:27:45] 2025-06-05 09:27:29,333 | INFO     | -- intersect: 29015958573.589333
[2025-06-05 09:27:45] 2025-06-05 09:27:29,333 | INFO     | current memory leak: -16.59 B/s (using 87 data points, chi2=0.02)
[2025-06-05 09:27:45] 2025-06-05 09:27:29,334 | INFO     | ..............................
[2025-06-05 09:27:45] 2025-06-05 09:27:29,334 | INFO     | . Timing measurements:
[2025-06-05 09:27:45] 2025-06-05 09:27:29,334 | INFO     | . get job = 0 s
[2025-06-05 09:27:45] 2025-06-05 09:27:29,334 | INFO     | . initial setup = 2 s
[2025-06-05 09:27:45] 2025-06-05 09:27:29,334 | INFO     | . payload setup = 6 s
[2025-06-05 09:27:45] 2025-06-05 09:27:29,334 | INFO     | . stage-in = 0 s
[2025-06-05 09:27:45] 2025-06-05 09:27:29,334 | INFO     | . payload execution = 6891 s
[2025-06-05 09:27:45] 2025-06-05 09:27:29,334 | INFO     | . stage-out = 0 s
[2025-06-05 09:27:45] 2025-06-05 09:27:29,334 | INFO     | . log creation = 0 s
[2025-06-05 09:27:45] 2025-06-05 09:27:29,334 | INFO     | ..............................
[2025-06-05 09:27:45] 2025-06-05 09:27:29,685 | INFO     | 
[2025-06-05 09:27:45] 2025-06-05 09:27:29,685 | INFO     | job summary report
[2025-06-05 09:27:45] 2025-06-05 09:27:29,686 | INFO     | --------------------------------------------------
[2025-06-05 09:27:45] 2025-06-05 09:27:29,686 | INFO     | PanDA job id: 6678285622
[2025-06-05 09:27:45] 2025-06-05 09:27:29,686 | INFO     | task id: 45006595
[2025-06-05 09:27:45] 2025-06-05 09:27:29,686 | INFO     | errors: (none)
[2025-06-05 09:27:45] 2025-06-05 09:27:29,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:27:45] 2025-06-05 09:27:29,686 | INFO     | pilot state: finished 
[2025-06-05 09:27:45] 2025-06-05 09:27:29,687 | INFO     | transexitcode: 0
[2025-06-05 09:27:45] 2025-06-05 09:27:29,687 | INFO     | exeerrorcode: 0
[2025-06-05 09:27:45] 2025-06-05 09:27:29,687 | INFO     | exeerrordiag: 
[2025-06-05 09:27:45] 2025-06-05 09:27:29,687 | INFO     | exitcode: 0
[2025-06-05 09:27:45] 2025-06-05 09:27:29,687 | INFO     | exitmsg: OK
[2025-06-05 09:27:45] 2025-06-05 09:27:29,687 | INFO     | cpuconsumptiontime: 32312 s
[2025-06-05 09:27:45] 2025-06-05 09:27:29,688 | INFO     | nevents: 400
[2025-06-05 09:27:45] 2025-06-05 09:27:29,688 | INFO     | neventsw: 0
[2025-06-05 09:27:45] 2025-06-05 09:27:29,688 | INFO     | pid: 1737239
[2025-06-05 09:27:45] 2025-06-05 09:27:29,688 | INFO     | pgrp: 1737239
[2025-06-05 09:27:45] 2025-06-05 09:27:29,688 | INFO     | corecount: 12
[2025-06-05 09:27:45] 2025-06-05 09:27:29,688 | INFO     | event service: False
[2025-06-05 09:27:45] 2025-06-05 09:27:29,689 | INFO     | sizes: {0: 2397363, 4: 2397569, 11: 2397597, 6901: 2424624, 6902: 2424623, 6903: 2433850, 6958: 2433964}
[2025-06-05 09:27:45] 2025-06-05 09:27:29,689 | INFO     | --------------------------------------------------
[2025-06-05 09:27:45] 2025-06-05 09:27:29,689 | INFO     | 
[2025-06-05 09:27:45] 2025-06-05 09:27:29,689 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 09:27:45] 2025-06-05 09:27:29,715 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,715 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,715 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,717 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:27:45] 2025-06-05 09:27:29,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,717 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:27:45] 2025-06-05 09:27:29,717 | INFO     | job 6678285622 has completed (purged errors)
[2025-06-05 09:27:45] 2025-06-05 09:27:29,717 | INFO     | overall cleanup function is called
[2025-06-05 09:27:45] 2025-06-05 09:27:30,725 | INFO     | --- collectZombieJob: --- 10, [1737239]
[2025-06-05 09:27:45] 2025-06-05 09:27:30,725 | INFO     | zombie collector waiting for pid 1737239
[2025-06-05 09:27:45] 2025-06-05 09:27:30,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:27:45] 2025-06-05 09:27:30,726 | INFO     | collected zombie processes
[2025-06-05 09:27:45] 2025-06-05 09:27:30,726 | INFO     | will attempt to kill all subprocesses of pid=1737239
[2025-06-05 09:27:45] 2025-06-05 09:27:30,778 | INFO     | process IDs to be killed: [1737239] (in reverse order)
[2025-06-05 09:27:45] 2025-06-05 09:27:30,819 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:27:45] 2025-06-05 09:27:30,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:27:45] 2025-06-05 09:27:30,824 | INFO     | did not find any defunct processes belonging to 1737239
[2025-06-05 09:27:45] 2025-06-05 09:27:30,828 | INFO     | did not find any defunct processes belonging to 1737239
[2025-06-05 09:27:45] 2025-06-05 09:27:30,828 | INFO     | ready for new job
[2025-06-05 09:27:45] 2025-06-05 09:27:30,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:27:45] 2025-06-05 09:27:30,830 | INFO     | **************************************
[2025-06-05 09:27:45] 2025-06-05 09:27:30,830 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:27:45] 2025-06-05 09:27:30,830 | INFO     | **************************************
[2025-06-05 09:27:45] 2025-06-05 09:27:30,830 | INFO     | 
[2025-06-05 09:27:45] 2025-06-05 09:27:30,856 | INFO     | architecture information:
[2025-06-05 09:27:45] 2025-06-05 09:27:30,856 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:27:45] 2025-06-05 09:27:30,879 | INFO     | cat /etc/os-release:
[2025-06-05 09:27:45] NAME="CentOS Linux"
[2025-06-05 09:27:45] VERSION="7 (Core)"
[2025-06-05 09:27:45] ID="centos"
[2025-06-05 09:27:45] ID_LIKE="rhel fedora"
[2025-06-05 09:27:45] VERSION_ID="7"
[2025-06-05 09:27:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:27:45] ANSI_COLOR="0;31"
[2025-06-05 09:27:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:27:45] HOME_URL="https://www.centos.org/"
[2025-06-05 09:27:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:27:45] 
[2025-06-05 09:27:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:27:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:27:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:27:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:27:45] 
[2025-06-05 09:27:45] 2025-06-05 09:27:30,879 | INFO     | **************************************
[2025-06-05 09:27:45] 2025-06-05 09:27:31,381 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 09:27:45] 2025-06-05 09:27:31,406 | INFO     | sufficient remaining disk space (118818340864 B)
[2025-06-05 09:27:45] 2025-06-05 09:27:31,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:27:45] 2025-06-05 09:27:31,406 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:27:45] 2025-06-05 09:27:31,406 | INFO     | update_server=False
[2025-06-05 09:27:45] 2025-06-05 09:27:31,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:27:45] 2025-06-05 09:27:31,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:27:45] 2025-06-05 09:27:31,407 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 09:27:45] 2025-06-05 09:27:31,407 | INFO     | aborting loop
[2025-06-05 09:27:45] 2025-06-05 09:27:31,408 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:27:45] 2025-06-05 09:27:31,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:27:45] 2025-06-05 09:27:31,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:27:45] 2025-06-05 09:27:31,758 | INFO     | all data control threads have been joined
[2025-06-05 09:27:45] 2025-06-05 09:27:32,219 | INFO     | all payload control threads have been joined
[2025-06-05 09:27:45] 2025-06-05 09:27:32,412 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:32,413 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:32,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:27:45] 2025-06-05 09:27:32,659 | INFO     | all job control threads have been joined
[2025-06-05 09:27:45] 2025-06-05 09:27:32,762 | INFO     | [data] control thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:32,801 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:32,986 | INFO     | [job] validate thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:33,094 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:33,207 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:33,225 | INFO     | [payload] control thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:33,289 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:33,382 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:33,548 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:33,603 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:33,665 | INFO     | [job] control thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:34,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:27:45] 2025-06-05 09:27:34,426 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:34,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:27:45] 2025-06-05 09:27:35,397 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:38,463 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:27:45] 2025-06-05 09:27:40,485 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309744588608)>', '<ExcThread(monitor, started 140309300229888)>']
[2025-06-05 09:27:45] 2025-06-05 09:27:41,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:27:45] 2025-06-05 09:27:41,461 | INFO     | [monitor] control thread has ended
[2025-06-05 09:27:45] 2025-06-05 09:27:45,511 | INFO     | all workflow threads have been joined
[2025-06-05 09:27:45] 2025-06-05 09:27:45,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:27:45] 2025-06-05 09:27:45,512 | INFO     | traces error code: 0
[2025-06-05 09:27:45] 2025-06-05 09:27:45,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:27:45] 2025-06-05 09:27:45,607 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:27:45] 2025-06-05 09:27:45,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:27:45] 2025-06-05 09:27:45,612 [wrapper] pilotpid: 1728486
[2025-06-05 09:27:45] 2025-06-05 09:27:45,616 [wrapper] Pilot exit status: 0
[2025-06-05 09:27:45] 2025-06-05 09:27:45,628 [wrapper] pandaids: 6678285622
[2025-06-05 09:27:45] 2025-06-05 09:27:45,651 [wrapper] cleanup supervisor_pilot 1800189 1728487
[2025-06-05 09:27:45] 2025-06-05 09:27:45,654 [wrapper] Test setup, not cleaning
[2025-06-05 09:27:45] 2025-06-05 09:27:45,658 [wrapper] apfmon messages muted
[2025-06-05 09:27:45] 2025-06-05 09:27:45,661 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:27:45] 2025-06-05 09:27:45,665 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:27:45]  *** Error codes and diagnostics ***
[2025-06-05 09:27:45]     "exeErrorCode": 0,
[2025-06-05 09:27:45]     "exeErrorDiag": "",
[2025-06-05 09:27:45]     "pilotErrorCode": 0,
[2025-06-05 09:27:45]     "pilotErrorDiag": "",
[2025-06-05 09:27:45]  *** Listing of results directory ***
[2025-06-05 09:27:45] total 390748
[2025-06-05 09:27:45] -rw-r--r-- 1 boinc boinc    495897 Jun  4 02:52 pilot3.tar.gz
[2025-06-05 09:27:45] -rwx------ 1 boinc boinc     37140 Jun  4 02:55 runpilot2-wrapper.sh
[2025-06-05 09:27:45] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:55 queuedata.json
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc       100 Jun  5 07:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:27:45] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 07:31 run_atlas
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc       105 Jun  5 07:31 job.xml
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc      9446 Jun  5 07:31 init_data.xml
[2025-06-05 09:27:45] -rw-r--r-- 2 boinc boinc 214668528 Jun  5 07:31 EVNT.45006593._002037.pool.root.1
[2025-06-05 09:27:45] drwxrwx--x 2 boinc boinc      4096 Jun  5 07:31 shared
[2025-06-05 09:27:45] -rw-r--r-- 2 boinc boinc    508876 Jun  5 07:31 input.tar.gz
[2025-06-05 09:27:45] -rw-r--r-- 2 boinc boinc     15093 Jun  5 07:31 start_atlas.sh
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc         0 Jun  5 07:31 boinc_lockfile
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc      2524 Jun  5 07:31 pandaJob.out
[2025-06-05 09:27:45] -rw------- 1 boinc boinc    983087 Jun  5 07:31 agis_schedconf.cvmfs.json
[2025-06-05 09:27:45] -rw------- 1 boinc boinc   1598969 Jun  5 07:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:27:45] drwx------ 4 boinc boinc      4096 Jun  5 07:31 pilot3
[2025-06-05 09:27:45] -rw------- 1 boinc boinc 179585230 Jun  5 09:21 HITS.45006595._050831.pool.root.1
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc       529 Jun  5 09:26 boinc_task_state.xml
[2025-06-05 09:27:45] -rw------- 1 boinc boinc      1027 Jun  5 09:26 memory_monitor_summary.json
[2025-06-05 09:27:45] -rw------- 1 boinc boinc    368307 Jun  5 09:26 log.45006595._050831.job.log.tgz.1
[2025-06-05 09:27:45] -rw------- 1 boinc boinc        95 Jun  5 09:26 pilot_heartbeat.json
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 09:27 boinc_mmap_file
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc        27 Jun  5 09:27 wrapper_checkpoint.txt
[2025-06-05 09:27:45] -rw------- 1 boinc boinc      7685 Jun  5 09:27 heartbeat.json
[2025-06-05 09:27:45] -rw------- 1 boinc boinc      4500 Jun  5 09:27 pilotlog.txt
[2025-06-05 09:27:45] -rw------- 1 boinc boinc    648712 Jun  5 09:27 log.45006595._050831.job.log.1
[2025-06-05 09:27:45] -rw------- 1 boinc boinc       357 Jun  5 09:27 output.list
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc       620 Jun  5 09:27 runtime_log
[2025-06-05 09:27:45] -rw------- 1 boinc boinc   1034240 Jun  5 09:27 result.tar.gz
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc      8973 Jun  5 09:27 runtime_log.err
[2025-06-05 09:27:45] -rw------- 1 boinc boinc       656 Jun  5 09:27 MZwLDmQTtg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbwmKDmIISaPo.diag
[2025-06-05 09:27:45] -rw-rw-r-- 1 boinc boinc     21421 Jun  5 09:27 stderr.txt
[2025-06-05 09:27:45] HITS file was successfully produced:
[2025-06-05 09:27:45] -rw------- 1 boinc boinc 179585230 Jun  5 09:21 shared/HITS.pool.root.1
[2025-06-05 09:27:45]  *** Contents of shared directory: ***
[2025-06-05 09:27:45] total 386556
[2025-06-05 09:27:45] -rw-r--r-- 2 boinc boinc 214668528 Jun  5 07:31 ATLAS.root_0
[2025-06-05 09:27:45] -rw-r--r-- 2 boinc boinc    508876 Jun  5 07:31 input.tar.gz
[2025-06-05 09:27:45] -rw-r--r-- 2 boinc boinc     15093 Jun  5 07:31 start_atlas.sh
[2025-06-05 09:27:45] -rw------- 1 boinc boinc 179585230 Jun  5 09:21 HITS.pool.root.1
[2025-06-05 09:27:45] -rw------- 1 boinc boinc   1034240 Jun  5 09:27 result.tar.gz
09:27:47 (1724794): run_atlas exited; CPU time 32330.929297
09:27:47 (1724794): called boinc_finish(0)

</stderr_txt>
]]>

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