Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:49:37 (43451): wrapper (7.7.26015): starting
05:49:37 (43451): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:49:37] Arguments: --nthreads 8
[2025-06-04 05:49:37] Threads: 8
[2025-06-04 05:49:37] Checking for CVMFS
[2025-06-04 05:49:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:49:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:49:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:49:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:49:38] 2.11.2.0 29495 107700 305688 146775 2 194 13228867 18432000 5215 130560 0 275004887 98.768 735881323 37227 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 05:49:38] CVMFS is ok
[2025-06-04 05:49:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:49:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:49:38] Further information can be found at the LHC@home message board.
[2025-06-04 05:49:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:49:38] Checking for apptainer binary...
[2025-06-04 05:49:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:49:38] Running /usr/bin/apptainer --version
[2025-06-04 05:49:38] apptainer version 1.3.2-1.el7
[2025-06-04 05:49:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:49:39] c-211-7.aglt2.org
[2025-06-04 05:49:39] apptainer works
[2025-06-04 05:49:39] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:49:39] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:49:39] Starting ATLAS job with PandaID=6678313711
[2025-06-04 05:49:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:32:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:32:29] 2025-06-04 11:32:16,452 | INFO     | extracted standard info from prmon json
[2025-06-04 07:32:29] 2025-06-04 11:32:16,452 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:32:29] 2025-06-04 11:32:16,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:32:29] 2025-06-04 11:32:16,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:32:29] 2025-06-04 11:32:16,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:32:29] 2025-06-04 11:32:16,454 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:32:29] 2025-06-04 11:32:16,454 | INFO     | sum of square deviations: 319447850.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,454 | INFO     | sum of deviations: 7081692886.000001
[2025-06-04 07:32:29] 2025-06-04 11:32:16,454 | INFO     | mean x: 1749033669.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,454 | INFO     | mean y: 2419934.0693069305
[2025-06-04 07:32:29] 2025-06-04 11:32:16,454 | INFO     | -- intersect: -38771105356.93447
[2025-06-04 07:32:29] 2025-06-04 11:32:16,454 | INFO     | intersect: -38771105356.93447
[2025-06-04 07:32:29] 2025-06-04 11:32:16,455 | INFO     | chi2: 2.105472181808984
[2025-06-04 07:32:29] 2025-06-04 11:32:16,455 | INFO     | sum of square deviations: 274312120.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,455 | INFO     | sum of deviations: 13048910495.500002
[2025-06-04 07:32:29] 2025-06-04 11:32:16,455 | INFO     | mean x: 1749033516.5
[2025-06-04 07:32:29] 2025-06-04 11:32:16,455 | INFO     | mean y: 2439203.5104166665
[2025-06-04 07:32:29] 2025-06-04 11:32:16,455 | INFO     | -- intersect: -83198338838.80913
[2025-06-04 07:32:29] 2025-06-04 11:32:16,455 | INFO     | intersect: -83198338838.80913
[2025-06-04 07:32:29] 2025-06-04 11:32:16,455 | INFO     | chi2: 1.3325046154963673
[2025-06-04 07:32:29] 2025-06-04 11:32:16,456 | INFO     | current chi2=1.3325046154963673 (change=36.71231436781544 %)
[2025-06-04 07:32:29] 2025-06-04 11:32:16,456 | INFO     | sum of square deviations: 233641590.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,456 | INFO     | sum of deviations: 12321189127.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,456 | INFO     | mean x: 1749033364.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,456 | INFO     | mean y: 2436472.3296703296
[2025-06-04 07:32:29] 2025-06-04 11:32:16,456 | INFO     | -- intersect: -92233585664.29863
[2025-06-04 07:32:29] 2025-06-04 11:32:16,456 | INFO     | intersect: -92233585664.29863
[2025-06-04 07:32:29] 2025-06-04 11:32:16,456 | INFO     | chi2: 1.3347001825849856
[2025-06-04 07:32:29] 2025-06-04 11:32:16,456 | INFO     | current chi2=1.3347001825849856 (change=-0.16476994248911994 %)
[2025-06-04 07:32:29] 2025-06-04 11:32:16,456 | INFO     | right removable region: 90
[2025-06-04 07:32:29] 2025-06-04 11:32:16,457 | INFO     | sum of square deviations: 274312120.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,457 | INFO     | sum of deviations: -6898486340.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,457 | INFO     | mean x: 1749033821.5
[2025-06-04 07:32:29] 2025-06-04 11:32:16,457 | INFO     | mean y: 2466162.1458333335
[2025-06-04 07:32:29] 2025-06-04 11:32:16,457 | INFO     | -- intersect: 43987711603.782715
[2025-06-04 07:32:29] 2025-06-04 11:32:16,457 | INFO     | intersect: 43987711603.782715
[2025-06-04 07:32:29] 2025-06-04 11:32:16,457 | INFO     | chi2: 0.8295823438384211
[2025-06-04 07:32:29] 2025-06-04 11:32:16,457 | INFO     | current chi2=0.8295823438384211 (change=60.59875067427114 %)
[2025-06-04 07:32:29] 2025-06-04 11:32:16,458 | INFO     | sum of square deviations: 233641590.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,458 | INFO     | sum of deviations: -7172521215.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,458 | INFO     | mean x: 1749033974.0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,458 | INFO     | mean y: 2467035.769230769
[2025-06-04 07:32:29] 2025-06-04 11:32:16,458 | INFO     | -- intersect: 53695746919.16139
[2025-06-04 07:32:29] 2025-06-04 11:32:16,458 | INFO     | intersect: 53695746919.16139
[2025-06-04 07:32:29] 2025-06-04 11:32:16,458 | INFO     | chi2: 0.8174643821306644
[2025-06-04 07:32:29] 2025-06-04 11:32:16,458 | INFO     | current chi2=0.8174643821306644 (change=1.4607304263115957 %)
[2025-06-04 07:32:29] 2025-06-04 11:32:16,458 | INFO     | left removable region: 20
[2025-06-04 07:32:29] 2025-06-04 11:32:16,458 | INFO     | sum of square deviations: 106336877.5
[2025-06-04 07:32:29] 2025-06-04 11:32:16,459 | INFO     | sum of deviations: 367773971.49999994
[2025-06-04 07:32:29] 2025-06-04 11:32:16,459 | INFO     | mean x: 1749033943.5
[2025-06-04 07:32:29] 2025-06-04 11:32:16,459 | INFO     | mean y: 2482911.9285714286
[2025-06-04 07:32:29] 2025-06-04 11:32:16,459 | INFO     | -- intersect: -6046680603.233903
[2025-06-04 07:32:29] 2025-06-04 11:32:16,459 | INFO     | intersect: -6046680603.233903
[2025-06-04 07:32:29] 2025-06-04 11:32:16,459 | INFO     | chi2: 0.002792198851482134
[2025-06-04 07:32:29] 2025-06-04 11:32:16,459 | INFO     | -- intersect: -6046680603.233903
[2025-06-04 07:32:29] 2025-06-04 11:32:16,459 | INFO     | current memory leak: 3.46 B/s (using 70 data points, chi2=0.00)
[2025-06-04 07:32:29] 2025-06-04 11:32:16,459 | INFO     | ..............................
[2025-06-04 07:32:29] 2025-06-04 11:32:16,460 | INFO     | . Timing measurements:
[2025-06-04 07:32:29] 2025-06-04 11:32:16,460 | INFO     | . get job = 0 s
[2025-06-04 07:32:29] 2025-06-04 11:32:16,460 | INFO     | . initial setup = 2 s
[2025-06-04 07:32:29] 2025-06-04 11:32:16,460 | INFO     | . payload setup = 6 s
[2025-06-04 07:32:29] 2025-06-04 11:32:16,460 | INFO     | . stage-in = 0 s
[2025-06-04 07:32:29] 2025-06-04 11:32:16,460 | INFO     | . payload execution = 6106 s
[2025-06-04 07:32:29] 2025-06-04 11:32:16,460 | INFO     | . stage-out = 0 s
[2025-06-04 07:32:29] 2025-06-04 11:32:16,460 | INFO     | . log creation = 0 s
[2025-06-04 07:32:29] 2025-06-04 11:32:16,460 | INFO     | ..............................
[2025-06-04 07:32:29] 2025-06-04 11:32:16,687 | INFO     | 
[2025-06-04 07:32:29] 2025-06-04 11:32:16,687 | INFO     | job summary report
[2025-06-04 07:32:29] 2025-06-04 11:32:16,687 | INFO     | --------------------------------------------------
[2025-06-04 07:32:29] 2025-06-04 11:32:16,688 | INFO     | PanDA job id: 6678313711
[2025-06-04 07:32:29] 2025-06-04 11:32:16,688 | INFO     | task id: 45006595
[2025-06-04 07:32:29] 2025-06-04 11:32:16,688 | INFO     | errors: (none)
[2025-06-04 07:32:29] 2025-06-04 11:32:16,688 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:32:29] 2025-06-04 11:32:16,688 | INFO     | pilot state: finished 
[2025-06-04 07:32:29] 2025-06-04 11:32:16,688 | INFO     | transexitcode: 0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,688 | INFO     | exeerrorcode: 0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,688 | INFO     | exeerrordiag: 
[2025-06-04 07:32:29] 2025-06-04 11:32:16,688 | INFO     | exitcode: 0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,688 | INFO     | exitmsg: OK
[2025-06-04 07:32:29] 2025-06-04 11:32:16,689 | INFO     | cpuconsumptiontime: 45255 s
[2025-06-04 07:32:29] 2025-06-04 11:32:16,689 | INFO     | nevents: 400
[2025-06-04 07:32:29] 2025-06-04 11:32:16,689 | INFO     | neventsw: 0
[2025-06-04 07:32:29] 2025-06-04 11:32:16,689 | INFO     | pid: 5170
[2025-06-04 07:32:29] 2025-06-04 11:32:16,689 | INFO     | pgrp: 5170
[2025-06-04 07:32:29] 2025-06-04 11:32:16,689 | INFO     | corecount: 8
[2025-06-04 07:32:29] 2025-06-04 11:32:16,689 | INFO     | event service: False
[2025-06-04 07:32:29] 2025-06-04 11:32:16,689 | INFO     | sizes: {0: 2405183, 7: 2405389, 11: 2405417, 6116: 2432184, 6117: 2441125, 6121: 2441181, 6129: 2441479}
[2025-06-04 07:32:29] 2025-06-04 11:32:16,689 | INFO     | --------------------------------------------------
[2025-06-04 07:32:29] 2025-06-04 11:32:16,689 | INFO     | 
[2025-06-04 07:32:29] 2025-06-04 11:32:16,690 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 07:32:29] 2025-06-04 11:32:16,732 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,733 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,733 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,733 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,734 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,734 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,734 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,734 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,734 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,734 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:32:29] 2025-06-04 11:32:16,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:32:29] 2025-06-04 11:32:16,736 | INFO     | job 6678313711 has completed (purged errors)
[2025-06-04 07:32:29] 2025-06-04 11:32:16,737 | INFO     | overall cleanup function is called
[2025-06-04 07:32:29] 2025-06-04 11:32:16,963 | INFO     | PID=47101 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 07:32:29] 2025-06-04 11:32:16,963 | INFO     | .. there are 9 such processes running
[2025-06-04 07:32:29] 2025-06-04 11:32:17,748 | INFO     | --- collectZombieJob: --- 10, [5170]
[2025-06-04 07:32:29] 2025-06-04 11:32:17,748 | INFO     | zombie collector waiting for pid 5170
[2025-06-04 07:32:29] 2025-06-04 11:32:17,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:32:29] 2025-06-04 11:32:17,748 | INFO     | collected zombie processes
[2025-06-04 07:32:29] 2025-06-04 11:32:17,748 | INFO     | will attempt to kill all subprocesses of pid=5170
[2025-06-04 07:32:29] 2025-06-04 11:32:17,963 | INFO     | process IDs to be killed: [5170] (in reverse order)
[2025-06-04 07:32:29] 2025-06-04 11:32:18,021 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:32:29] 2025-06-04 11:32:18,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:32:29] 2025-06-04 11:32:18,025 | INFO     | did not find any defunct processes belonging to 5170
[2025-06-04 07:32:29] 2025-06-04 11:32:18,027 | INFO     | did not find any defunct processes belonging to 5170
[2025-06-04 07:32:29] 2025-06-04 11:32:18,027 | INFO     | ready for new job
[2025-06-04 07:32:29] 2025-06-04 11:32:18,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:32:29] 2025-06-04 11:32:18,029 | INFO     | **************************************
[2025-06-04 07:32:29] 2025-06-04 11:32:18,029 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:32:29] 2025-06-04 11:32:18,029 | INFO     | **************************************
[2025-06-04 07:32:29] 2025-06-04 11:32:18,029 | INFO     | 
[2025-06-04 07:32:29] 2025-06-04 11:32:18,030 | INFO     | architecture information:
[2025-06-04 07:32:29] 2025-06-04 11:32:18,031 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:32:29] 2025-06-04 11:32:18,042 | INFO     | cat /etc/os-release:
[2025-06-04 07:32:29] NAME="CentOS Linux"
[2025-06-04 07:32:29] VERSION="7 (Core)"
[2025-06-04 07:32:29] ID="centos"
[2025-06-04 07:32:29] ID_LIKE="rhel fedora"
[2025-06-04 07:32:29] VERSION_ID="7"
[2025-06-04 07:32:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:32:29] ANSI_COLOR="0;31"
[2025-06-04 07:32:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:32:29] HOME_URL="https://www.centos.org/"
[2025-06-04 07:32:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:32:29] 
[2025-06-04 07:32:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:32:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:32:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:32:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:32:29] 
[2025-06-04 07:32:29] 2025-06-04 11:32:18,042 | INFO     | **************************************
[2025-06-04 07:32:29] 2025-06-04 11:32:18,544 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 07:32:29] 2025-06-04 11:32:18,557 | INFO     | sufficient remaining disk space (56650366976 B)
[2025-06-04 07:32:29] 2025-06-04 11:32:18,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:32:29] 2025-06-04 11:32:18,558 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:32:29] 2025-06-04 11:32:18,558 | INFO     | update_server=False
[2025-06-04 07:32:29] 2025-06-04 11:32:18,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:32:29] 2025-06-04 11:32:18,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:32:29] 2025-06-04 11:32:18,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:32:29] 2025-06-04 11:32:18,846 | INFO     | all payload control threads have been joined
[2025-06-04 07:32:29] 2025-06-04 11:32:18,972 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:32:29] 2025-06-04 11:32:18,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:32:29] 2025-06-04 11:32:18,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:32:29] 2025-06-04 11:32:19,246 | INFO     | all data control threads have been joined
[2025-06-04 07:32:29] 2025-06-04 11:32:19,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:32:29] 2025-06-04 11:32:19,379 | INFO     | aborting loop
[2025-06-04 07:32:29] 2025-06-04 11:32:19,560 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:19,657 | INFO     | all job control threads have been joined
[2025-06-04 07:32:29] 2025-06-04 11:32:19,676 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:19,825 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:19,851 | INFO     | [payload] control thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:19,929 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:20,142 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:20,251 | INFO     | [data] control thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:20,384 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:20,563 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:20,615 | INFO     | [job] validate thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:20,662 | INFO     | [job] control thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:20,801 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:20,815 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:20,886 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:21,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:32:29] 2025-06-04 11:32:22,529 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:22,806 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:32:29] 2025-06-04 11:32:24,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483396757312)>', '<ExcThread(monitor, started 140482709534464)>']
[2025-06-04 07:32:29] 2025-06-04 11:32:24,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:32:29] 2025-06-04 11:32:24,997 | INFO     | [monitor] control thread has ended
[2025-06-04 07:32:29] 2025-06-04 11:32:29,509 | INFO     | all workflow threads have been joined
[2025-06-04 07:32:29] 2025-06-04 11:32:29,509 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:32:29] 2025-06-04 11:32:29,510 | INFO     | traces error code: 0
[2025-06-04 07:32:29] 2025-06-04 11:32:29,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:32:29] 2025-06-04 11:32:29,619 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:32:29] 2025-06-04 11:32:29,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:32:29] 2025-06-04 11:32:29,624 [wrapper] pilotpid: 47101
[2025-06-04 07:32:29] 2025-06-04 11:32:29,626 [wrapper] Pilot exit status: 0
[2025-06-04 07:32:29] 2025-06-04 11:32:29,635 [wrapper] pandaids: 6678313711
[2025-06-04 07:32:29] 2025-06-04 11:32:29,674 [wrapper] cleanup supervisor_pilot 28083 47102
[2025-06-04 07:32:29] 2025-06-04 11:32:29,689 [wrapper] Test setup, not cleaning
[2025-06-04 07:32:29] 2025-06-04 11:32:29,691 [wrapper] apfmon messages muted
[2025-06-04 07:32:29] 2025-06-04 11:32:29,694 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:32:29] 2025-06-04 11:32:29,696 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:32:29]  *** Error codes and diagnostics ***
[2025-06-04 07:32:29]     "exeErrorCode": 0,
[2025-06-04 07:32:29]     "exeErrorDiag": "",
[2025-06-04 07:32:29]     "pilotErrorCode": 0,
[2025-06-04 07:32:29]     "pilotErrorDiag": "",
[2025-06-04 07:32:29]  *** Listing of results directory ***
[2025-06-04 07:32:29] total 389380
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:35 queuedata.json
[2025-06-04 07:32:29] -rwx------ 1 boincer umatlas     37140 Jun  4 00:37 runpilot2-wrapper.sh
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas       100 Jun  4 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:32:29] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 05:49 run_atlas
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas       105 Jun  4 05:49 job.xml
[2025-06-04 07:32:29] -rw-r--r-- 2 boincer umatlas 214217784 Jun  4 05:49 EVNT.45006593._002110.pool.root.1
[2025-06-04 07:32:29] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:49 start_atlas.sh
[2025-06-04 07:32:29] drwxrwx--x 2 boincer umatlas      4096 Jun  4 05:49 shared
[2025-06-04 07:32:29] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 05:49 input.tar.gz
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas         0 Jun  4 05:49 boinc_lockfile
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 05:49 pandaJob.out
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas    986766 Jun  4 05:49 agis_schedconf.cvmfs.json
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas   1603667 Jun  4 05:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:32:29] drwx------ 4 boincer umatlas      4096 Jun  4 05:49 pilot3
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas      6131 Jun  4 07:28 init_data.xml
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas        95 Jun  4 07:31 pilot_heartbeat.json
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas 178848188 Jun  4 07:31 HITS.45006595._052691.pool.root.1
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas       529 Jun  4 07:31 boinc_task_state.xml
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas      1047 Jun  4 07:32 memory_monitor_summary.json
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas    322211 Jun  4 07:32 log.45006595._052691.job.log.tgz.1
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas      7733 Jun  4 07:32 heartbeat.json
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:32 boinc_mmap_file
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:32 wrapper_checkpoint.txt
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas      4353 Jun  4 07:32 pilotlog.txt
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas    589021 Jun  4 07:32 log.45006595._052691.job.log.1
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas       357 Jun  4 07:32 output.list
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:32 runtime_log
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas    931840 Jun  4 07:32 result.tar.gz
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 07:32 runtime_log.err
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas       655 Jun  4 07:32 q0xMDmV3ug7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGiaKDmvZ0mqm.diag
[2025-06-04 07:32:29] -rw-r--r-- 1 boincer umatlas     20825 Jun  4 07:32 stderr.txt
[2025-06-04 07:32:29] HITS file was successfully produced:
[2025-06-04 07:32:29] -rw------- 1 boincer umatlas 178848188 Jun  4 07:31 shared/HITS.pool.root.1
[2025-06-04 07:32:29]  *** Contents of shared directory: ***
[2025-06-04 07:32:29] total 385292
[2025-06-04 07:32:30] -rw-r--r-- 2 boincer umatlas 214217784 Jun  4 05:49 ATLAS.root_0
[2025-06-04 07:32:30] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:49 start_atlas.sh
[2025-06-04 07:32:30] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 05:49 input.tar.gz
[2025-06-04 07:32:30] -rw------- 1 boincer umatlas 178848188 Jun  4 07:31 HITS.pool.root.1
[2025-06-04 07:32:30] -rw------- 1 boincer umatlas    931840 Jun  4 07:32 result.tar.gz
07:32:31 (43451): run_atlas exited; CPU time 45372.430050
07:32:31 (43451): called boinc_finish(0)

</stderr_txt>
]]>

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