Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:54:23 (39764): wrapper (7.7.26015): starting
05:54:23 (39764): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 05:54:23] Arguments: --nthreads 10
[2025-06-04 05:54:23] Threads: 10
[2025-06-04 05:54:23] Checking for CVMFS
[2025-06-04 05:54:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:54:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:54:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:54:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:54:24] 2.11.2.0 5464 110221 294012 146775 3 68 9364015 18432001 3241 130560 0 178371059 99.263 466851947 37707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 05:54:24] CVMFS is ok
[2025-06-04 05:54:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:54:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:54:24] Further information can be found at the LHC@home message board.
[2025-06-04 05:54:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:54:24] Checking for apptainer binary...
[2025-06-04 05:54:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:54:24] Running /usr/bin/apptainer --version
[2025-06-04 05:54:24] apptainer version 1.3.2-1.el7
[2025-06-04 05:54:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:54:24] c-210-12.aglt2.org
[2025-06-04 05:54:24] apptainer works
[2025-06-04 05:54:24] Set ATHENA_PROC_NUMBER=10
[2025-06-04 05:54:24] Set ATHENA_CORE_NUMBER=10
[2025-06-04 05:54:24] Starting ATLAS job with PandaID=6678313687
[2025-06-04 05:54:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:07:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:07:09]  is_tar=False
[2025-06-04 07:07:09]  lfn=log.45006595._052667.job.log.tgz.1
[2025-06-04 07:07:09]  mtime=0
[2025-06-04 07:07:09]  protocol_id=None
[2025-06-04 07:07:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:07:09]  replicas=None
[2025-06-04 07:07:09]  scope=mc23_13p6TeV
[2025-06-04 07:07:09]  status=None
[2025-06-04 07:07:09]  status_code=0
[2025-06-04 07:07:09]  storage_token=
[2025-06-04 07:07:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678313687/log.45006595._052667.job.log.tgz.1
[2025-06-04 07:07:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/5a/log.45006595._052667.job.log.tgz.1
[2025-06-04 07:07:09]  workdir=None
[2025-06-04 07:07:09] ]
[2025-06-04 07:07:09] 2025-06-04 11:06:48,393 | INFO     | transferring file log.45006595._052667.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678313687/log.45006595._052667.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 07:07:09] 2025-06-04 11:06:48,393 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678313687/log.45006595._052667.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052667.job
[2025-06-04 07:07:09] 2025-06-04 11:06:48,407 | INFO     | adding to output.list: log.45006595._052667.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/5a/log.45006595._052667.job.log.tg
[2025-06-04 07:07:09] 2025-06-04 11:06:48,408 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:07:09] 2025-06-04 11:06:48,408 | INFO     | summary of transferred files:
[2025-06-04 07:07:09] 2025-06-04 11:06:48,408 | INFO     |  -- lfn=log.45006595._052667.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:07:09] 2025-06-04 11:06:48,408 | INFO     | stage-out finished correctly
[2025-06-04 07:07:09] 2025-06-04 11:06:48,466 | INFO     | monitor loop #328: job 0:6678313687 is in state 'finished'
[2025-06-04 07:07:09] 2025-06-04 11:06:48,466 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:07:09] 2025-06-04 11:06:48,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:07:09] 2025-06-04 11:06:50,979 | INFO     | monitor loop #329: job 0:6678313687 is in state 'finished'
[2025-06-04 07:07:09] 2025-06-04 11:06:50,980 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:07:09] 2025-06-04 11:06:51,116 | INFO     | job 6678313687 has state=finished
[2025-06-04 07:07:09] 2025-06-04 11:06:51,117 | INFO     | preparing for final server update for job 6678313687 in state='finished'
[2025-06-04 07:07:09] 2025-06-04 11:06:51,117 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:07:09] 2025-06-04 11:06:51,117 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:07:09] 2025-06-04 11:06:51,117 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:07:09] 2025-06-04 11:06:51,117 | INFO     | job 6678313687 has finished - writing final server update
[2025-06-04 07:07:09] 2025-06-04 11:06:51,117 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:07:09] 2025-06-04 11:06:51,119 | INFO     | executing command: lscpu
[2025-06-04 07:07:09] 2025-06-04 11:06:51,147 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:07:09] 2025-06-04 11:06:53,482 | INFO     | monitor loop #330: job 0:6678313687 is in state 'finished'
[2025-06-04 07:07:09] 2025-06-04 11:06:53,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:07:09] 2025-06-04 11:06:55,985 | INFO     | monitor loop #331: job 0:6678313687 is in state 'finished'
[2025-06-04 07:07:09] 2025-06-04 11:06:55,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:07:09] 2025-06-04 11:06:56,149 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:07:09] 2025-06-04 11:06:56,150 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678313687/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:07:09] 2025-06-04 11:06:56,150 | INFO     | extracted standard info from prmon json
[2025-06-04 07:07:09] 2025-06-04 11:06:56,151 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:07:09] 2025-06-04 11:06:56,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:07:09] 2025-06-04 11:06:56,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:07:09] 2025-06-04 11:06:56,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:07:09] 2025-06-04 11:06:56,152 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:07:09] 2025-06-04 11:06:56,152 | INFO     | sum of square deviations: 81266640.0
[2025-06-04 07:07:09] 2025-06-04 11:06:56,153 | INFO     | sum of deviations: -2086837297.5
[2025-06-04 07:07:09] 2025-06-04 11:06:56,153 | INFO     | mean x: 1749033123.5
[2025-06-04 07:07:09] 2025-06-04 11:06:56,153 | INFO     | mean y: 2597716.328125
[2025-06-04 07:07:09] 2025-06-04 11:06:56,153 | INFO     | -- intersect: 44915830953.02554
[2025-06-04 07:07:09] 2025-06-04 11:06:56,153 | INFO     | intersect: 44915830953.02554
[2025-06-04 07:07:09] 2025-06-04 11:06:56,153 | INFO     | chi2: 0.011516003701916057
[2025-06-04 07:07:09] 2025-06-04 11:06:56,153 | INFO     | -- intersect: 44915830953.02554
[2025-06-04 07:07:09] 2025-06-04 11:06:56,153 | INFO     | current memory leak: -25.68 B/s (using 64 data points, chi2=0.01)
[2025-06-04 07:07:09] 2025-06-04 11:06:56,154 | INFO     | ..............................
[2025-06-04 07:07:09] 2025-06-04 11:06:56,154 | INFO     | . Timing measurements:
[2025-06-04 07:07:09] 2025-06-04 11:06:56,154 | INFO     | . get job = 0 s
[2025-06-04 07:07:09] 2025-06-04 11:06:56,154 | INFO     | . initial setup = 2 s
[2025-06-04 07:07:09] 2025-06-04 11:06:56,154 | INFO     | . payload setup = 5 s
[2025-06-04 07:07:09] 2025-06-04 11:06:56,154 | INFO     | . stage-in = 0 s
[2025-06-04 07:07:09] 2025-06-04 11:06:56,154 | INFO     | . payload execution = 4310 s
[2025-06-04 07:07:09] 2025-06-04 11:06:56,154 | INFO     | . stage-out = 0 s
[2025-06-04 07:07:09] 2025-06-04 11:06:56,154 | INFO     | . log creation = 0 s
[2025-06-04 07:07:09] 2025-06-04 11:06:56,154 | INFO     | ..............................
[2025-06-04 07:07:09] 2025-06-04 11:06:56,212 | INFO     | 
[2025-06-04 07:07:09] 2025-06-04 11:06:56,212 | INFO     | job summary report
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | --------------------------------------------------
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | PanDA job id: 6678313687
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | task id: 45006595
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | errors: (none)
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | pilot state: finished 
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | transexitcode: 0
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | exeerrorcode: 0
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | exeerrordiag: 
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | exitcode: 0
[2025-06-04 07:07:09] 2025-06-04 11:06:56,213 | INFO     | exitmsg: OK
[2025-06-04 07:07:09] 2025-06-04 11:06:56,214 | INFO     | cpuconsumptiontime: 38575 s
[2025-06-04 07:07:09] 2025-06-04 11:06:56,214 | INFO     | nevents: 400
[2025-06-04 07:07:09] 2025-06-04 11:06:56,214 | INFO     | neventsw: 0
[2025-06-04 07:07:09] 2025-06-04 11:06:56,214 | INFO     | pid: 18042
[2025-06-04 07:07:09] 2025-06-04 11:06:56,214 | INFO     | pgrp: 18042
[2025-06-04 07:07:09] 2025-06-04 11:06:56,214 | INFO     | corecount: 10
[2025-06-04 07:07:09] 2025-06-04 11:06:56,214 | INFO     | event service: False
[2025-06-04 07:07:09] 2025-06-04 11:06:56,214 | INFO     | sizes: {0: 2405133, 3: 2405339, 11: 2405367, 4319: 2431422, 4321: 2440419, 4329: 2440533}
[2025-06-04 07:07:09] 2025-06-04 11:06:56,214 | INFO     | --------------------------------------------------
[2025-06-04 07:07:09] 2025-06-04 11:06:56,214 | INFO     | 
[2025-06-04 07:07:09] 2025-06-04 11:06:56,215 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:07:09] 2025-06-04 11:06:56,230 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:07:09] 2025-06-04 11:06:56,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:07:09] 2025-06-04 11:06:56,233 | INFO     | job 6678313687 has completed (purged errors)
[2025-06-04 07:07:09] 2025-06-04 11:06:56,233 | INFO     | overall cleanup function is called
[2025-06-04 07:07:09] 2025-06-04 11:06:57,239 | INFO     | --- collectZombieJob: --- 10, [18042]
[2025-06-04 07:07:09] 2025-06-04 11:06:57,239 | INFO     | zombie collector waiting for pid 18042
[2025-06-04 07:07:09] 2025-06-04 11:06:57,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:07:09] 2025-06-04 11:06:57,240 | INFO     | collected zombie processes
[2025-06-04 07:07:09] 2025-06-04 11:06:57,240 | INFO     | will attempt to kill all subprocesses of pid=18042
[2025-06-04 07:07:09] 2025-06-04 11:06:57,371 | INFO     | process IDs to be killed: [18042] (in reverse order)
[2025-06-04 07:07:09] 2025-06-04 11:06:57,433 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:07:09] 2025-06-04 11:06:57,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:07:09] 2025-06-04 11:06:57,437 | INFO     | did not find any defunct processes belonging to 18042
[2025-06-04 07:07:09] 2025-06-04 11:06:57,440 | INFO     | did not find any defunct processes belonging to 18042
[2025-06-04 07:07:09] 2025-06-04 11:06:57,440 | INFO     | ready for new job
[2025-06-04 07:07:09] 2025-06-04 11:06:57,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:07:09] 2025-06-04 11:06:57,441 | INFO     | **************************************
[2025-06-04 07:07:09] 2025-06-04 11:06:57,441 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:07:09] 2025-06-04 11:06:57,441 | INFO     | **************************************
[2025-06-04 07:07:09] 2025-06-04 11:06:57,441 | INFO     | 
[2025-06-04 07:07:09] 2025-06-04 11:06:57,443 | INFO     | architecture information:
[2025-06-04 07:07:09] 2025-06-04 11:06:57,443 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:07:09] 2025-06-04 11:06:57,454 | INFO     | cat /etc/os-release:
[2025-06-04 07:07:09] NAME="CentOS Linux"
[2025-06-04 07:07:09] VERSION="7 (Core)"
[2025-06-04 07:07:09] ID="centos"
[2025-06-04 07:07:09] ID_LIKE="rhel fedora"
[2025-06-04 07:07:09] VERSION_ID="7"
[2025-06-04 07:07:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:07:09] ANSI_COLOR="0;31"
[2025-06-04 07:07:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:07:09] HOME_URL="https://www.centos.org/"
[2025-06-04 07:07:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:07:09] 
[2025-06-04 07:07:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:07:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:07:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:07:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:07:09] 
[2025-06-04 07:07:09] 2025-06-04 11:06:57,454 | INFO     | **************************************
[2025-06-04 07:07:09] 2025-06-04 11:06:57,958 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:07:09] 2025-06-04 11:06:57,973 | INFO     | sufficient remaining disk space (57004785664 B)
[2025-06-04 07:07:09] 2025-06-04 11:06:57,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:07:09] 2025-06-04 11:06:57,973 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:07:09] 2025-06-04 11:06:57,974 | INFO     | update_server=False
[2025-06-04 07:07:09] 2025-06-04 11:06:57,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:07:09] 2025-06-04 11:06:57,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:07:09] 2025-06-04 11:06:57,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:07:09] 2025-06-04 11:06:57,975 | INFO     | aborting loop
[2025-06-04 07:07:09] 2025-06-04 11:06:58,388 | INFO     | PID=9846 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 07:07:09] 2025-06-04 11:06:58,388 | INFO     | .. there are 7 such processes running
[2025-06-04 07:07:09] 2025-06-04 11:06:58,388 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:07:09] 2025-06-04 11:06:58,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:07:09] 2025-06-04 11:06:58,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:07:09] 2025-06-04 11:06:58,523 | INFO     | all job control threads have been joined
[2025-06-04 07:07:09] 2025-06-04 11:06:58,717 | INFO     | all data control threads have been joined
[2025-06-04 07:07:09] 2025-06-04 11:06:58,824 | INFO     | all payload control threads have been joined
[2025-06-04 07:07:09] 2025-06-04 11:06:58,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:07:09] 2025-06-04 11:06:58,978 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:58,980 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:58,980 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:58,998 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:59,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:07:09] 2025-06-04 11:06:59,180 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:59,528 | INFO     | [job] control thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:59,584 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:59,723 | INFO     | [data] control thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:59,786 | INFO     | [job] validate thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:59,789 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:59,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:06:59,830 | INFO     | [payload] control thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:07:00,207 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:07:00,241 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:07:00,981 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:07:03,067 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:07:09] 2025-06-04 11:07:04,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122200811328)>', '<ExcThread(monitor, started 140121621915392)>']
[2025-06-04 07:07:09] 2025-06-04 11:07:05,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:07:09] 2025-06-04 11:07:05,419 | INFO     | [monitor] control thread has ended
[2025-06-04 07:07:09] 2025-06-04 11:07:09,676 | INFO     | all workflow threads have been joined
[2025-06-04 07:07:09] 2025-06-04 11:07:09,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:07:09] 2025-06-04 11:07:09,677 | INFO     | traces error code: 0
[2025-06-04 07:07:09] 2025-06-04 11:07:09,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:07:09] 2025-06-04 11:07:09,794 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:07:09] 2025-06-04 11:07:09,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:07:09] 2025-06-04 11:07:09,798 [wrapper] pilotpid: 9846
[2025-06-04 07:07:09] 2025-06-04 11:07:09,801 [wrapper] Pilot exit status: 0
[2025-06-04 07:07:09] 2025-06-04 11:07:09,818 [wrapper] pandaids: 6678313687
[2025-06-04 07:07:09] 2025-06-04 11:07:09,854 [wrapper] cleanup supervisor_pilot 38839 9847
[2025-06-04 07:07:09] 2025-06-04 11:07:09,857 [wrapper] Test setup, not cleaning
[2025-06-04 07:07:09] 2025-06-04 11:07:09,860 [wrapper] apfmon messages muted
[2025-06-04 07:07:09] 2025-06-04 11:07:09,862 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:07:09] 2025-06-04 11:07:09,864 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:07:09]  *** Error codes and diagnostics ***
[2025-06-04 07:07:09]     "exeErrorCode": 0,
[2025-06-04 07:07:09]     "exeErrorDiag": "",
[2025-06-04 07:07:09]     "pilotErrorCode": 0,
[2025-06-04 07:07:09]     "pilotErrorDiag": "",
[2025-06-04 07:07:09]  *** Listing of results directory ***
[2025-06-04 07:07:09] total 391432
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 07:07:09] -rwx------ 1 boincer umatlas     37140 Jun  4 00:31 runpilot2-wrapper.sh
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:31 queuedata.json
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas       100 Jun  4 05:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:07:09] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 05:54 run_atlas
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas       105 Jun  4 05:54 job.xml
[2025-06-04 07:07:09] -rw-r--r-- 2 boincer umatlas 217124254 Jun  4 05:54 EVNT.45006593._002109.pool.root.1
[2025-06-04 07:07:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:54 start_atlas.sh
[2025-06-04 07:07:09] drwxrwx--x 2 boincer umatlas      4096 Jun  4 05:54 shared
[2025-06-04 07:07:09] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 05:54 input.tar.gz
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas         0 Jun  4 05:54 boinc_lockfile
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 05:54 pandaJob.out
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas    986766 Jun  4 05:54 agis_schedconf.cvmfs.json
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas   1603667 Jun  4 05:54 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:07:09] drwx------ 4 boincer umatlas      4096 Jun  4 05:54 pilot3
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas      6227 Jun  4 07:03 init_data.xml
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas 178331225 Jun  4 07:06 HITS.45006595._052667.pool.root.1
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas       529 Jun  4 07:06 boinc_task_state.xml
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas        95 Jun  4 07:06 pilot_heartbeat.json
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas      1052 Jun  4 07:06 memory_monitor_summary.json
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas    335103 Jun  4 07:06 log.45006595._052667.job.log.tgz.1
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas      7755 Jun  4 07:06 heartbeat.json
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:07 boinc_mmap_file
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:07 wrapper_checkpoint.txt
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas      4744 Jun  4 07:07 pilotlog.txt
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas    434501 Jun  4 07:07 log.45006595._052667.job.log.1
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas       357 Jun  4 07:07 output.list
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:07 runtime_log
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas    788480 Jun  4 07:07 result.tar.gz
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 07:07 runtime_log.err
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas       657 Jun  4 07:07 pxVMDmexug7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhhaKDmTPeSKn.diag
[2025-06-04 07:07:09] -rw-r--r-- 1 boincer umatlas     21536 Jun  4 07:07 stderr.txt
[2025-06-04 07:07:09] HITS file was successfully produced:
[2025-06-04 07:07:09] -rw------- 1 boincer umatlas 178331225 Jun  4 07:06 shared/HITS.pool.root.1
[2025-06-04 07:07:09]  *** Contents of shared directory: ***
[2025-06-04 07:07:10] total 387480
[2025-06-04 07:07:10] -rw-r--r-- 2 boincer umatlas 217124254 Jun  4 05:54 ATLAS.root_0
[2025-06-04 07:07:10] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:54 start_atlas.sh
[2025-06-04 07:07:10] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 05:54 input.tar.gz
[2025-06-04 07:07:10] -rw------- 1 boincer umatlas 178331225 Jun  4 07:06 HITS.pool.root.1
[2025-06-04 07:07:10] -rw------- 1 boincer umatlas    788480 Jun  4 07:07 result.tar.gz
07:07:11 (39764): run_atlas exited; CPU time 38607.973792
07:07:11 (39764): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN