Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:35:52 (22949): wrapper (7.7.26015): starting
05:35:52 (22949): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:35:52] Arguments: --nthreads 8
[2025-06-04 05:35:52] Threads: 8
[2025-06-04 05:35:52] Checking for CVMFS
[2025-06-04 05:35:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:35:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:35:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:35:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:35:53] 2.11.2.0 2944 35439 93656 146775 1 55 13626916 20275201 1 130560 0 12347097 99.959 7476019 8340 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 05:35:53] CVMFS is ok
[2025-06-04 05:35:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:35:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:35:53] Further information can be found at the LHC@home message board.
[2025-06-04 05:35:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:35:53] Checking for apptainer binary...
[2025-06-04 05:35:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:35:53] Running /usr/bin/apptainer --version
[2025-06-04 05:35:53] apptainer version 1.3.2-1.el7
[2025-06-04 05:35:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:35:55] c-204-38.aglt2.org
[2025-06-04 05:35:55] apptainer works
[2025-06-04 05:35:55] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:35:55] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:35:55] Starting ATLAS job with PandaID=6678313693
[2025-06-04 05:35:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:31:38]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:31:38] 2025-06-04 11:31:18,266 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678313693/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:31:38] 2025-06-04 11:31:18,267 | INFO     | extracted standard info from prmon json
[2025-06-04 07:31:38] 2025-06-04 11:31:18,267 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:31:38] 2025-06-04 11:31:18,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:31:38] 2025-06-04 11:31:18,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:31:38] 2025-06-04 11:31:18,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:31:38] 2025-06-04 11:31:18,272 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:31:38] 2025-06-04 11:31:18,272 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,273 | INFO     | sum of deviations: -8663174067.0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,273 | INFO     | mean x: 1749033220.0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,273 | INFO     | mean y: 2509187.9557522126
[2025-06-04 07:31:38] 2025-06-04 11:31:18,274 | INFO     | -- intersect: 33870961993.731438
[2025-06-04 07:31:38] 2025-06-04 11:31:18,274 | INFO     | intersect: 33870961993.731438
[2025-06-04 07:31:38] 2025-06-04 11:31:18,274 | INFO     | chi2: 2.4857305019448463
[2025-06-04 07:31:38] 2025-06-04 11:31:18,275 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,275 | INFO     | sum of deviations: -232915445.99999878
[2025-06-04 07:31:38] 2025-06-04 11:31:18,275 | INFO     | mean x: 1749033067.5
[2025-06-04 07:31:38] 2025-06-04 11:31:18,276 | INFO     | mean y: 2531071.907407407
[2025-06-04 07:31:38] 2025-06-04 11:31:18,276 | INFO     | -- intersect: 1045529984.0045692
[2025-06-04 07:31:38] 2025-06-04 11:31:18,276 | INFO     | intersect: 1045529984.0045692
[2025-06-04 07:31:38] 2025-06-04 11:31:18,276 | INFO     | chi2: 1.6392751967696575
[2025-06-04 07:31:38] 2025-06-04 11:31:18,276 | INFO     | current chi2=1.6392751967696575 (change=34.05257748227004 %)
[2025-06-04 07:31:38] 2025-06-04 11:31:18,276 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,277 | INFO     | sum of deviations: 234100370.99999672
[2025-06-04 07:31:38] 2025-06-04 11:31:18,277 | INFO     | mean x: 1749032915.0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,277 | INFO     | mean y: 2532448.495145631
[2025-06-04 07:31:38] 2025-06-04 11:31:18,277 | INFO     | -- intersect: -1205979433.610319
[2025-06-04 07:31:38] 2025-06-04 11:31:18,277 | INFO     | intersect: -1205979433.610319
[2025-06-04 07:31:38] 2025-06-04 11:31:18,278 | INFO     | chi2: 1.641694092276965
[2025-06-04 07:31:38] 2025-06-04 11:31:18,278 | INFO     | current chi2=1.641694092276965 (change=-0.14755884259544133 %)
[2025-06-04 07:31:38] 2025-06-04 11:31:18,278 | INFO     | right removable region: 102
[2025-06-04 07:31:38] 2025-06-04 11:31:18,278 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,279 | INFO     | sum of deviations: -25531676209.000004
[2025-06-04 07:31:38] 2025-06-04 11:31:18,279 | INFO     | mean x: 1749033372.5
[2025-06-04 07:31:38] 2025-06-04 11:31:18,279 | INFO     | mean y: 2553539.925925926
[2025-06-04 07:31:38] 2025-06-04 11:31:18,279 | INFO     | -- intersect: 114333808126.2499
[2025-06-04 07:31:38] 2025-06-04 11:31:18,279 | INFO     | intersect: 114333808126.2499
[2025-06-04 07:31:38] 2025-06-04 11:31:18,279 | INFO     | chi2: 1.0044188570693293
[2025-06-04 07:31:38] 2025-06-04 11:31:18,280 | INFO     | current chi2=1.0044188570693293 (change=59.59260843911005 %)
[2025-06-04 07:31:38] 2025-06-04 11:31:18,280 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,280 | INFO     | sum of deviations: -23838675621.0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,280 | INFO     | mean x: 1749033525.0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,281 | INFO     | mean y: 2548429.0291262134
[2025-06-04 07:31:38] 2025-06-04 11:31:18,281 | INFO     | -- intersect: 123066568644.93935
[2025-06-04 07:31:38] 2025-06-04 11:31:18,281 | INFO     | intersect: 123066568644.93935
[2025-06-04 07:31:38] 2025-06-04 11:31:18,281 | INFO     | chi2: 0.9939137987992502
[2025-06-04 07:31:38] 2025-06-04 11:31:18,281 | INFO     | current chi2=0.9939137987992502 (change=1.0458842141544915 %)
[2025-06-04 07:31:38] 2025-06-04 11:31:18,281 | INFO     | left removable region: 20
[2025-06-04 07:31:38] 2025-06-04 11:31:18,281 | INFO     | sum of square deviations: 170944600.5
[2025-06-04 07:31:38] 2025-06-04 11:31:18,282 | INFO     | sum of deviations: -9131575681.999996
[2025-06-04 07:31:38] 2025-06-04 11:31:18,282 | INFO     | mean x: 1749033494.5
[2025-06-04 07:31:38] 2025-06-04 11:31:18,282 | INFO     | mean y: 2557040.9024390243
[2025-06-04 07:31:38] 2025-06-04 11:31:18,282 | INFO     | -- intersect: 93433011578.01239
[2025-06-04 07:31:38] 2025-06-04 11:31:18,282 | INFO     | intersect: 93433011578.01239
[2025-06-04 07:31:38] 2025-06-04 11:31:18,283 | INFO     | chi2: 0.08267085855380843
[2025-06-04 07:31:38] 2025-06-04 11:31:18,283 | INFO     | -- intersect: 93433011578.01239
[2025-06-04 07:31:38] 2025-06-04 11:31:18,283 | INFO     | current memory leak: -53.42 B/s (using 82 data points, chi2=0.08)
[2025-06-04 07:31:38] 2025-06-04 11:31:18,283 | INFO     | ..............................
[2025-06-04 07:31:38] 2025-06-04 11:31:18,283 | INFO     | . Timing measurements:
[2025-06-04 07:31:38] 2025-06-04 11:31:18,284 | INFO     | . get job = 0 s
[2025-06-04 07:31:38] 2025-06-04 11:31:18,284 | INFO     | . initial setup = 2 s
[2025-06-04 07:31:38] 2025-06-04 11:31:18,284 | INFO     | . payload setup = 11 s
[2025-06-04 07:31:38] 2025-06-04 11:31:18,284 | INFO     | . stage-in = 0 s
[2025-06-04 07:31:38] 2025-06-04 11:31:18,284 | INFO     | . payload execution = 6863 s
[2025-06-04 07:31:38] 2025-06-04 11:31:18,284 | INFO     | . stage-out = 0 s
[2025-06-04 07:31:38] 2025-06-04 11:31:18,284 | INFO     | . log creation = 0 s
[2025-06-04 07:31:38] 2025-06-04 11:31:18,284 | INFO     | ..............................
[2025-06-04 07:31:38] 2025-06-04 11:31:18,714 | INFO     | 
[2025-06-04 07:31:38] 2025-06-04 11:31:18,714 | INFO     | job summary report
[2025-06-04 07:31:38] 2025-06-04 11:31:18,714 | INFO     | --------------------------------------------------
[2025-06-04 07:31:38] 2025-06-04 11:31:18,715 | INFO     | PanDA job id: 6678313693
[2025-06-04 07:31:38] 2025-06-04 11:31:18,715 | INFO     | task id: 45006595
[2025-06-04 07:31:38] 2025-06-04 11:31:18,715 | INFO     | errors: (none)
[2025-06-04 07:31:38] 2025-06-04 11:31:18,715 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:31:38] 2025-06-04 11:31:18,715 | INFO     | pilot state: finished 
[2025-06-04 07:31:38] 2025-06-04 11:31:18,715 | INFO     | transexitcode: 0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,716 | INFO     | exeerrorcode: 0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,716 | INFO     | exeerrordiag: 
[2025-06-04 07:31:38] 2025-06-04 11:31:18,716 | INFO     | exitcode: 0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,716 | INFO     | exitmsg: OK
[2025-06-04 07:31:38] 2025-06-04 11:31:18,716 | INFO     | cpuconsumptiontime: 51258 s
[2025-06-04 07:31:38] 2025-06-04 11:31:18,717 | INFO     | nevents: 400
[2025-06-04 07:31:38] 2025-06-04 11:31:18,717 | INFO     | neventsw: 0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,717 | INFO     | pid: 680
[2025-06-04 07:31:38] 2025-06-04 11:31:18,717 | INFO     | pgrp: 680
[2025-06-04 07:31:38] 2025-06-04 11:31:18,717 | INFO     | corecount: 8
[2025-06-04 07:31:38] 2025-06-04 11:31:18,717 | INFO     | event service: False
[2025-06-04 07:31:38] 2025-06-04 11:31:18,718 | INFO     | sizes: {0: 2404957, 1: 2405212, 7: 2405418, 12: 2405446, 6879: 2432454, 6880: 2432453, 6881: 2441578, 6882: 2441634, 6891: 2441804}
[2025-06-04 07:31:38] 2025-06-04 11:31:18,718 | INFO     | --------------------------------------------------
[2025-06-04 07:31:38] 2025-06-04 11:31:18,718 | INFO     | 
[2025-06-04 07:31:38] 2025-06-04 11:31:18,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:31:38] 2025-06-04 11:31:18,748 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,749 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,749 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,749 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,750 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,752 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:31:38] 2025-06-04 11:31:18,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:31:38] 2025-06-04 11:31:18,753 | INFO     | job 6678313693 has completed (purged errors)
[2025-06-04 07:31:38] 2025-06-04 11:31:18,753 | INFO     | overall cleanup function is called
[2025-06-04 07:31:38] 2025-06-04 11:31:19,757 | INFO     | --- collectZombieJob: --- 10, [680]
[2025-06-04 07:31:38] 2025-06-04 11:31:19,757 | INFO     | zombie collector waiting for pid 680
[2025-06-04 07:31:38] 2025-06-04 11:31:19,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:31:38] 2025-06-04 11:31:19,758 | INFO     | collected zombie processes
[2025-06-04 07:31:38] 2025-06-04 11:31:19,758 | INFO     | will attempt to kill all subprocesses of pid=680
[2025-06-04 07:31:38] 2025-06-04 11:31:19,849 | INFO     | process IDs to be killed: [680] (in reverse order)
[2025-06-04 07:31:38] 2025-06-04 11:31:19,908 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:31:38] 2025-06-04 11:31:19,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:31:38] 2025-06-04 11:31:19,913 | INFO     | did not find any defunct processes belonging to 680
[2025-06-04 07:31:38] 2025-06-04 11:31:19,916 | INFO     | did not find any defunct processes belonging to 680
[2025-06-04 07:31:38] 2025-06-04 11:31:19,916 | INFO     | ready for new job
[2025-06-04 07:31:38] 2025-06-04 11:31:19,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:31:38] 2025-06-04 11:31:19,918 | INFO     | **************************************
[2025-06-04 07:31:38] 2025-06-04 11:31:19,918 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:31:38] 2025-06-04 11:31:19,918 | INFO     | **************************************
[2025-06-04 07:31:38] 2025-06-04 11:31:19,919 | INFO     | 
[2025-06-04 07:31:38] 2025-06-04 11:31:19,919 | INFO     | architecture information:
[2025-06-04 07:31:38] 2025-06-04 11:31:19,920 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:31:38] 2025-06-04 11:31:19,937 | INFO     | cat /etc/os-release:
[2025-06-04 07:31:38] NAME="CentOS Linux"
[2025-06-04 07:31:38] VERSION="7 (Core)"
[2025-06-04 07:31:38] ID="centos"
[2025-06-04 07:31:38] ID_LIKE="rhel fedora"
[2025-06-04 07:31:38] VERSION_ID="7"
[2025-06-04 07:31:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:31:38] ANSI_COLOR="0;31"
[2025-06-04 07:31:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:31:38] HOME_URL="https://www.centos.org/"
[2025-06-04 07:31:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:31:38] 
[2025-06-04 07:31:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:31:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:31:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:31:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:31:38] 
[2025-06-04 07:31:38] 2025-06-04 11:31:19,938 | INFO     | **************************************
[2025-06-04 07:31:38] 2025-06-04 11:31:20,441 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:31:38] 2025-06-04 11:31:20,464 | INFO     | sufficient remaining disk space (18608029696 B)
[2025-06-04 07:31:38] 2025-06-04 11:31:20,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:31:38] 2025-06-04 11:31:20,464 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:31:38] 2025-06-04 11:31:20,464 | INFO     | update_server=False
[2025-06-04 07:31:38] 2025-06-04 11:31:20,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:31:38] 2025-06-04 11:31:20,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:31:38] 2025-06-04 11:31:20,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:31:38] 2025-06-04 11:31:20,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:31:38] 2025-06-04 11:31:20,946 | INFO     | aborting loop
[2025-06-04 07:31:38] 2025-06-04 11:31:20,947 | INFO     | all data control threads have been joined
[2025-06-04 07:31:38] 2025-06-04 11:31:21,051 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:31:38] 2025-06-04 11:31:21,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:31:38] 2025-06-04 11:31:21,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:31:38] 2025-06-04 11:31:21,466 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:21,661 | INFO     | all job control threads have been joined
[2025-06-04 07:31:38] 2025-06-04 11:31:21,692 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:21,792 | INFO     | all payload control threads have been joined
[2025-06-04 07:31:38] 2025-06-04 11:31:21,836 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:21,864 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:21,951 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:21,952 | INFO     | [data] control thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:22,470 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:22,524 | INFO     | [job] validate thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:22,666 | INFO     | [job] control thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:22,794 | INFO     | [payload] control thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:22,842 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:22,907 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:22,918 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:23,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:31:38] 2025-06-04 11:31:24,393 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:24,467 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:31,449 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:31:38] 2025-06-04 11:31:32,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:31:38] 2025-06-04 11:31:32,824 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961669310272)>', '<ExcThread(monitor, started 139960921331456)>']
[2025-06-04 07:31:38] 2025-06-04 11:31:33,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:31:38] 2025-06-04 11:31:33,106 | INFO     | [monitor] control thread has ended
[2025-06-04 07:31:38] 2025-06-04 11:31:37,841 | INFO     | all workflow threads have been joined
[2025-06-04 07:31:38] 2025-06-04 11:31:37,841 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:31:38] 2025-06-04 11:31:37,842 | INFO     | traces error code: 0
[2025-06-04 07:31:38] 2025-06-04 11:31:37,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:31:38] 2025-06-04 11:31:37,947 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:31:38] 2025-06-04 11:31:37,951 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:31:38] 2025-06-04 11:31:37,956 [wrapper] pilotpid: 26639
[2025-06-04 07:31:38] 2025-06-04 11:31:37,960 [wrapper] Pilot exit status: 0
[2025-06-04 07:31:38] 2025-06-04 11:31:37,979 [wrapper] pandaids: 6678313693
[2025-06-04 07:31:38] 2025-06-04 11:31:38,027 [wrapper] cleanup supervisor_pilot  4564 26640
[2025-06-04 07:31:38] 2025-06-04 11:31:38,032 [wrapper] Test setup, not cleaning
[2025-06-04 07:31:38] 2025-06-04 11:31:38,037 [wrapper] apfmon messages muted
[2025-06-04 07:31:38] 2025-06-04 11:31:38,042 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:31:38] 2025-06-04 11:31:38,046 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:31:38]  *** Error codes and diagnostics ***
[2025-06-04 07:31:38]     "exeErrorCode": 0,
[2025-06-04 07:31:38]     "exeErrorDiag": "",
[2025-06-04 07:31:38]     "pilotErrorCode": 0,
[2025-06-04 07:31:38]     "pilotErrorDiag": "",
[2025-06-04 07:31:38]  *** Listing of results directory ***
[2025-06-04 07:31:38] total 392680
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:32 queuedata.json
[2025-06-04 07:31:38] -rwx------ 1 boincer umatlas     37140 Jun  4 00:32 runpilot2-wrapper.sh
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas       100 Jun  4 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:31:38] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 05:35 run_atlas
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas       105 Jun  4 05:35 job.xml
[2025-06-04 07:31:38] -rw-r--r-- 2 boincer umatlas 217124254 Jun  4 05:35 EVNT.45006593._002109.pool.root.1
[2025-06-04 07:31:38] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:35 start_atlas.sh
[2025-06-04 07:31:38] drwxrwx--x 2 boincer umatlas      4096 Jun  4 05:35 shared
[2025-06-04 07:31:38] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 05:35 input.tar.gz
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas         0 Jun  4 05:35 boinc_lockfile
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 05:35 pandaJob.out
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas    986766 Jun  4 05:36 agis_schedconf.cvmfs.json
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas   1603667 Jun  4 05:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:31:38] drwx------ 4 boincer umatlas      4096 Jun  4 05:36 pilot3
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas      5905 Jun  4 07:28 init_data.xml
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas 179213695 Jun  4 07:30 HITS.45006595._052673.pool.root.1
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas        95 Jun  4 07:30 pilot_heartbeat.json
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas       530 Jun  4 07:30 boinc_task_state.xml
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas      1051 Jun  4 07:31 memory_monitor_summary.json
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas    336311 Jun  4 07:31 log.45006595._052673.job.log.tgz.1
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas      7751 Jun  4 07:31 heartbeat.json
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:31 boinc_mmap_file
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:31 wrapper_checkpoint.txt
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas      4425 Jun  4 07:31 pilotlog.txt
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas    632124 Jun  4 07:31 log.45006595._052673.job.log.1
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas       357 Jun  4 07:31 output.list
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:31 runtime_log
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas    983040 Jun  4 07:31 result.tar.gz
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 07:31 runtime_log.err
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas       659 Jun  4 07:31 HjsLDmzyug7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnhaKDmuBAr8n.diag
[2025-06-04 07:31:38] -rw-r--r-- 1 boincer umatlas     20776 Jun  4 07:31 stderr.txt
[2025-06-04 07:31:38] HITS file was successfully produced:
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas 179213695 Jun  4 07:30 shared/HITS.pool.root.1
[2025-06-04 07:31:38]  *** Contents of shared directory: ***
[2025-06-04 07:31:38] total 388532
[2025-06-04 07:31:38] -rw-r--r-- 2 boincer umatlas 217124254 Jun  4 05:35 ATLAS.root_0
[2025-06-04 07:31:38] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:35 start_atlas.sh
[2025-06-04 07:31:38] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 05:35 input.tar.gz
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas 179213695 Jun  4 07:30 HITS.pool.root.1
[2025-06-04 07:31:38] -rw------- 1 boincer umatlas    983040 Jun  4 07:31 result.tar.gz
07:31:40 (22949): run_atlas exited; CPU time 51215.526349
07:31:40 (22949): called boinc_finish(0)

</stderr_txt>
]]>

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