Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:39:48 (29280): wrapper (7.7.26015): starting
05:39:48 (29280): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 05:39:48] Arguments: --nthreads 10
[2025-06-04 05:39:48] Threads: 10
[2025-06-04 05:39:48] Checking for CVMFS
[2025-06-04 05:39:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:39:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:39:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:39:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:39:49] 2.11.2.0 1570 108674 241032 146775 1 144 13699200 18432000 16473 130560 0 483631531 99.069 999179319 35403 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 05:39:49] CVMFS is ok
[2025-06-04 05:39:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:39:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:39:49] Further information can be found at the LHC@home message board.
[2025-06-04 05:39:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:39:49] Checking for apptainer binary...
[2025-06-04 05:39:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:39:49] Running /usr/bin/apptainer --version
[2025-06-04 05:39:49] apptainer version 1.3.2-1.el7
[2025-06-04 05:39:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:39:49] c-210-9.aglt2.org
[2025-06-04 05:39:49] apptainer works
[2025-06-04 05:39:49] Set ATHENA_PROC_NUMBER=10
[2025-06-04 05:39:49] Set ATHENA_CORE_NUMBER=10
[2025-06-04 05:39:49] Starting ATLAS job with PandaID=6678313312
[2025-06-04 05:39:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:32:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:32:47] 2025-06-04 12:32:32,643 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:32:47] 2025-06-04 12:32:32,644 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678313312/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:32:47] 2025-06-04 12:32:32,644 | INFO     | extracted standard info from prmon json
[2025-06-04 08:32:47] 2025-06-04 12:32:32,644 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:32:47] 2025-06-04 12:32:32,645 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:32:47] 2025-06-04 12:32:32,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:32:47] 2025-06-04 12:32:32,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:32:47] 2025-06-04 12:32:32,649 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:32:47] 2025-06-04 12:32:32,649 | INFO     | sum of square deviations: 1496685163.86983
[2025-06-04 08:32:47] 2025-06-04 12:32:32,650 | INFO     | sum of deviations: 11087962126.627222
[2025-06-04 08:32:47] 2025-06-04 12:32:32,650 | INFO     | mean x: 1749035178.1360946
[2025-06-04 08:32:47] 2025-06-04 12:32:32,651 | INFO     | mean y: 2533850.798816568
[2025-06-04 08:32:47] 2025-06-04 12:32:32,651 | INFO     | -- intersect: -12954924592.343998
[2025-06-04 08:32:47] 2025-06-04 12:32:32,651 | INFO     | intersect: -12954924592.343998
[2025-06-04 08:32:47] 2025-06-04 12:32:32,651 | INFO     | chi2: 2.5498735561088384
[2025-06-04 08:32:47] 2025-06-04 12:32:32,651 | INFO     | sum of square deviations: 1367740923.7743852
[2025-06-04 08:32:47] 2025-06-04 12:32:32,652 | INFO     | sum of deviations: 22451103788.06706
[2025-06-04 08:32:47] 2025-06-04 12:32:32,653 | INFO     | mean x: 1749035025.640244
[2025-06-04 08:32:47] 2025-06-04 12:32:32,653 | INFO     | mean y: 2546946.323170732
[2025-06-04 08:32:47] 2025-06-04 12:32:32,653 | INFO     | -- intersect: -28707398195.371685
[2025-06-04 08:32:47] 2025-06-04 12:32:32,653 | INFO     | intersect: -28707398195.371685
[2025-06-04 08:32:47] 2025-06-04 12:32:32,653 | INFO     | chi2: 1.7012560030590755
[2025-06-04 08:32:47] 2025-06-04 12:32:32,653 | INFO     | current chi2=1.7012560030590755 (change=33.28076998236616 %)
[2025-06-04 08:32:47] 2025-06-04 12:32:32,654 | INFO     | sum of square deviations: 1246424733.6729584
[2025-06-04 08:32:47] 2025-06-04 12:32:32,655 | INFO     | sum of deviations: 21496694919.779896
[2025-06-04 08:32:47] 2025-06-04 12:32:32,655 | INFO     | mean x: 1749034873.144654
[2025-06-04 08:32:47] 2025-06-04 12:32:32,655 | INFO     | mean y: 2545746.2704402516
[2025-06-04 08:32:47] 2025-06-04 12:32:32,655 | INFO     | -- intersect: -30162507992.07409
[2025-06-04 08:32:47] 2025-06-04 12:32:32,655 | INFO     | intersect: -30162507992.07409
[2025-06-04 08:32:47] 2025-06-04 12:32:32,655 | INFO     | chi2: 1.7031185112493517
[2025-06-04 08:32:47] 2025-06-04 12:32:32,656 | INFO     | current chi2=1.7031185112493517 (change=-0.10947841988078721 %)
[2025-06-04 08:32:47] 2025-06-04 12:32:32,656 | INFO     | right removable region: 158
[2025-06-04 08:32:47] 2025-06-04 12:32:32,656 | INFO     | sum of square deviations: 1367726893.7743852
[2025-06-04 08:32:47] 2025-06-04 12:32:32,657 | INFO     | sum of deviations: -18982878039.39634
[2025-06-04 08:32:47] 2025-06-04 12:32:32,657 | INFO     | mean x: 1749035330.640244
[2025-06-04 08:32:47] 2025-06-04 12:32:32,657 | INFO     | mean y: 2569032.9085365855
[2025-06-04 08:32:47] 2025-06-04 12:32:32,657 | INFO     | -- intersect: 24277681644.400276
[2025-06-04 08:32:47] 2025-06-04 12:32:32,657 | INFO     | intersect: 24277681644.400276
[2025-06-04 08:32:47] 2025-06-04 12:32:32,658 | INFO     | chi2: 0.9390086274080951
[2025-06-04 08:32:47] 2025-06-04 12:32:32,658 | INFO     | current chi2=0.9390086274080951 (change=63.174306225558794 %)
[2025-06-04 08:32:47] 2025-06-04 12:32:32,658 | INFO     | sum of square deviations: 1246396673.6729584
[2025-06-04 08:32:47] 2025-06-04 12:32:32,659 | INFO     | sum of deviations: -19482835061.905663
[2025-06-04 08:32:47] 2025-06-04 12:32:32,659 | INFO     | mean x: 1749035483.144654
[2025-06-04 08:32:47] 2025-06-04 12:32:32,659 | INFO     | mean y: 2569601.169811321
[2025-06-04 08:32:47] 2025-06-04 12:32:32,659 | INFO     | -- intersect: 27342316693.97135
[2025-06-04 08:32:47] 2025-06-04 12:32:32,660 | INFO     | intersect: 27342316693.97135
[2025-06-04 08:32:47] 2025-06-04 12:32:32,660 | INFO     | chi2: 0.9214628884706216
[2025-06-04 08:32:47] 2025-06-04 12:32:32,660 | INFO     | current chi2=0.9214628884706216 (change=1.8685386295016488 %)
[2025-06-04 08:32:47] 2025-06-04 12:32:32,660 | INFO     | left removable region: 20
[2025-06-04 08:32:47] 2025-06-04 12:32:32,660 | INFO     | sum of square deviations: 814899172.9927546
[2025-06-04 08:32:47] 2025-06-04 12:32:32,661 | INFO     | sum of deviations: -3611923072.8695645
[2025-06-04 08:32:47] 2025-06-04 12:32:32,661 | INFO     | mean x: 1749035452.6594203
[2025-06-04 08:32:47] 2025-06-04 12:32:32,661 | INFO     | mean y: 2577742.1304347827
[2025-06-04 08:32:47] 2025-06-04 12:32:32,662 | INFO     | -- intersect: 7754925168.77777
[2025-06-04 08:32:47] 2025-06-04 12:32:32,662 | INFO     | intersect: 7754925168.77777
[2025-06-04 08:32:47] 2025-06-04 12:32:32,662 | INFO     | chi2: 0.029718882866411108
[2025-06-04 08:32:47] 2025-06-04 12:32:32,662 | INFO     | -- intersect: 7754925168.77777
[2025-06-04 08:32:47] 2025-06-04 12:32:32,662 | INFO     | current memory leak: -4.43 B/s (using 138 data points, chi2=0.03)
[2025-06-04 08:32:47] 2025-06-04 12:32:32,663 | INFO     | ..............................
[2025-06-04 08:32:47] 2025-06-04 12:32:32,663 | INFO     | . Timing measurements:
[2025-06-04 08:32:47] 2025-06-04 12:32:32,663 | INFO     | . get job = 0 s
[2025-06-04 08:32:47] 2025-06-04 12:32:32,663 | INFO     | . initial setup = 2 s
[2025-06-04 08:32:47] 2025-06-04 12:32:32,663 | INFO     | . payload setup = 13 s
[2025-06-04 08:32:47] 2025-06-04 12:32:32,663 | INFO     | . stage-in = 0 s
[2025-06-04 08:32:47] 2025-06-04 12:32:32,664 | INFO     | . payload execution = 10291 s
[2025-06-04 08:32:47] 2025-06-04 12:32:32,664 | INFO     | . stage-out = 1 s
[2025-06-04 08:32:47] 2025-06-04 12:32:32,664 | INFO     | . log creation = 0 s
[2025-06-04 08:32:47] 2025-06-04 12:32:32,664 | INFO     | ..............................
[2025-06-04 08:32:47] 2025-06-04 12:32:33,142 | INFO     | 
[2025-06-04 08:32:47] 2025-06-04 12:32:33,142 | INFO     | job summary report
[2025-06-04 08:32:47] 2025-06-04 12:32:33,142 | INFO     | --------------------------------------------------
[2025-06-04 08:32:47] 2025-06-04 12:32:33,142 | INFO     | PanDA job id: 6678313312
[2025-06-04 08:32:47] 2025-06-04 12:32:33,142 | INFO     | task id: 45006595
[2025-06-04 08:32:47] 2025-06-04 12:32:33,142 | INFO     | errors: (none)
[2025-06-04 08:32:47] 2025-06-04 12:32:33,142 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:32:47] 2025-06-04 12:32:33,142 | INFO     | pilot state: finished 
[2025-06-04 08:32:47] 2025-06-04 12:32:33,143 | INFO     | transexitcode: 0
[2025-06-04 08:32:47] 2025-06-04 12:32:33,143 | INFO     | exeerrorcode: 0
[2025-06-04 08:32:47] 2025-06-04 12:32:33,143 | INFO     | exeerrordiag: 
[2025-06-04 08:32:47] 2025-06-04 12:32:33,143 | INFO     | exitcode: 0
[2025-06-04 08:32:47] 2025-06-04 12:32:33,143 | INFO     | exitmsg: OK
[2025-06-04 08:32:47] 2025-06-04 12:32:33,143 | INFO     | cpuconsumptiontime: 44223 s
[2025-06-04 08:32:47] 2025-06-04 12:32:33,143 | INFO     | nevents: 400
[2025-06-04 08:32:47] 2025-06-04 12:32:33,151 | INFO     | neventsw: 0
[2025-06-04 08:32:47] 2025-06-04 12:32:33,151 | INFO     | pid: 27770
[2025-06-04 08:32:47] 2025-06-04 12:32:33,151 | INFO     | pgrp: 27770
[2025-06-04 08:32:47] 2025-06-04 12:32:33,151 | INFO     | corecount: 10
[2025-06-04 08:32:47] 2025-06-04 12:32:33,151 | INFO     | event service: False
[2025-06-04 08:32:47] 2025-06-04 12:32:33,151 | INFO     | sizes: {0: 2405013, 1: 2405212, 8: 2405418, 11: 2405446, 10308: 2434244, 10310: 2443185, 10312: 2443369, 10323: 2443539}
[2025-06-04 08:32:47] 2025-06-04 12:32:33,151 | INFO     | --------------------------------------------------
[2025-06-04 08:32:47] 2025-06-04 12:32:33,151 | INFO     | 
[2025-06-04 08:32:47] 2025-06-04 12:32:33,152 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 08:32:47] 2025-06-04 12:32:33,176 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,176 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,177 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,177 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:32:47] 2025-06-04 12:32:33,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:32:47] 2025-06-04 12:32:33,179 | INFO     | job 6678313312 has completed (purged errors)
[2025-06-04 08:32:47] 2025-06-04 12:32:33,179 | INFO     | overall cleanup function is called
[2025-06-04 08:32:47] 2025-06-04 12:32:34,186 | INFO     | --- collectZombieJob: --- 10, [27770]
[2025-06-04 08:32:47] 2025-06-04 12:32:34,187 | INFO     | zombie collector waiting for pid 27770
[2025-06-04 08:32:47] 2025-06-04 12:32:34,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:32:47] 2025-06-04 12:32:34,187 | INFO     | collected zombie processes
[2025-06-04 08:32:47] 2025-06-04 12:32:34,187 | INFO     | will attempt to kill all subprocesses of pid=27770
[2025-06-04 08:32:47] 2025-06-04 12:32:34,539 | INFO     | process IDs to be killed: [27770] (in reverse order)
[2025-06-04 08:32:47] 2025-06-04 12:32:34,711 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:32:47] 2025-06-04 12:32:34,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:32:47] 2025-06-04 12:32:34,722 | INFO     | did not find any defunct processes belonging to 27770
[2025-06-04 08:32:47] 2025-06-04 12:32:34,733 | INFO     | did not find any defunct processes belonging to 27770
[2025-06-04 08:32:47] 2025-06-04 12:32:34,734 | INFO     | ready for new job
[2025-06-04 08:32:47] 2025-06-04 12:32:34,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:32:47] 2025-06-04 12:32:34,736 | INFO     | **************************************
[2025-06-04 08:32:47] 2025-06-04 12:32:34,736 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:32:47] 2025-06-04 12:32:34,736 | INFO     | **************************************
[2025-06-04 08:32:47] 2025-06-04 12:32:34,737 | INFO     | 
[2025-06-04 08:32:47] 2025-06-04 12:32:34,739 | INFO     | architecture information:
[2025-06-04 08:32:47] 2025-06-04 12:32:34,740 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:32:47] 2025-06-04 12:32:34,761 | INFO     | cat /etc/os-release:
[2025-06-04 08:32:47] NAME="CentOS Linux"
[2025-06-04 08:32:47] VERSION="7 (Core)"
[2025-06-04 08:32:47] ID="centos"
[2025-06-04 08:32:47] ID_LIKE="rhel fedora"
[2025-06-04 08:32:47] VERSION_ID="7"
[2025-06-04 08:32:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:32:47] ANSI_COLOR="0;31"
[2025-06-04 08:32:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:32:47] HOME_URL="https://www.centos.org/"
[2025-06-04 08:32:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:32:47] 
[2025-06-04 08:32:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:32:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:32:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:32:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:32:47] 
[2025-06-04 08:32:47] 2025-06-04 12:32:34,762 | INFO     | **************************************
[2025-06-04 08:32:47] 2025-06-04 12:32:35,266 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 08:32:47] 2025-06-04 12:32:35,341 | INFO     | sufficient remaining disk space (56996397056 B)
[2025-06-04 08:32:47] 2025-06-04 12:32:35,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:32:47] 2025-06-04 12:32:35,341 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:32:47] 2025-06-04 12:32:35,341 | INFO     | update_server=False
[2025-06-04 08:32:47] 2025-06-04 12:32:35,341 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:32:47] 2025-06-04 12:32:35,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:32:47] 2025-06-04 12:32:35,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:32:47] 2025-06-04 12:32:35,895 | INFO     | aborting loop
[2025-06-04 08:32:47] 2025-06-04 12:32:35,936 | INFO     | all data control threads have been joined
[2025-06-04 08:32:47] 2025-06-04 12:32:36,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:32:47] 2025-06-04 12:32:36,137 | INFO     | all job control threads have been joined
[2025-06-04 08:32:47] 2025-06-04 12:32:36,206 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:32:47] 2025-06-04 12:32:36,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:32:47] 2025-06-04 12:32:36,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:32:47] 2025-06-04 12:32:36,342 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:36,409 | INFO     | [job] validate thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:36,411 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:36,431 | INFO     | all payload control threads have been joined
[2025-06-04 08:32:47] 2025-06-04 12:32:36,489 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:36,518 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:36,661 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:36,901 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:36,904 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:36,941 | INFO     | [data] control thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:36,965 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:37,143 | INFO     | [job] control thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:37,344 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:37,437 | INFO     | [payload] control thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:37,730 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:37,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:32:47] 2025-06-04 12:32:38,789 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:40,133 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:32:47] 2025-06-04 12:32:42,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285381076800)>', '<ExcThread(monitor, started 140284922926848)>']
[2025-06-04 08:32:47] 2025-06-04 12:32:42,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:32:47] 2025-06-04 12:32:42,241 | INFO     | [monitor] control thread has ended
[2025-06-04 08:32:47] 2025-06-04 12:32:47,131 | INFO     | all workflow threads have been joined
[2025-06-04 08:32:47] 2025-06-04 12:32:47,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:32:47] 2025-06-04 12:32:47,132 | INFO     | traces error code: 0
[2025-06-04 08:32:47] 2025-06-04 12:32:47,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:32:47] 2025-06-04 12:32:47,477 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:32:47] 2025-06-04 12:32:47,481 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:32:47] 2025-06-04 12:32:47,485 [wrapper] pilotpid: 3189
[2025-06-04 08:32:47] 2025-06-04 12:32:47,489 [wrapper] Pilot exit status: 0
[2025-06-04 08:32:47] 2025-06-04 12:32:47,504 [wrapper] pandaids: 6678313312
[2025-06-04 08:32:47] 2025-06-04 12:32:47,590 [wrapper] cleanup supervisor_pilot 23293 3190
[2025-06-04 08:32:47] 2025-06-04 12:32:47,593 [wrapper] Test setup, not cleaning
[2025-06-04 08:32:47] 2025-06-04 12:32:47,597 [wrapper] apfmon messages muted
[2025-06-04 08:32:47] 2025-06-04 12:32:47,600 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:32:47] 2025-06-04 12:32:47,604 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:32:47]  *** Error codes and diagnostics ***
[2025-06-04 08:32:47]     "exeErrorCode": 0,
[2025-06-04 08:32:47]     "exeErrorDiag": "",
[2025-06-04 08:32:47]     "pilotErrorCode": 0,
[2025-06-04 08:32:47]     "pilotErrorDiag": "",
[2025-06-04 08:32:47]  *** Listing of results directory ***
[2025-06-04 08:32:47] total 391764
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:20 queuedata.json
[2025-06-04 08:32:47] -rwx------ 1 boincer umatlas     37140 Jun  4 00:21 runpilot2-wrapper.sh
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas       100 Jun  4 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:32:47] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 05:39 run_atlas
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas       105 Jun  4 05:39 job.xml
[2025-06-04 08:32:47] -rw-r--r-- 2 boincer umatlas 217866947 Jun  4 05:39 EVNT.45006593._002099.pool.root.1
[2025-06-04 08:32:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:39 start_atlas.sh
[2025-06-04 08:32:47] drwxrwx--x 2 boincer umatlas      4096 Jun  4 05:39 shared
[2025-06-04 08:32:47] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 05:39 input.tar.gz
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas         0 Jun  4 05:39 boinc_lockfile
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 05:39 pandaJob.out
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas    986766 Jun  4 05:40 agis_schedconf.cvmfs.json
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas   1603667 Jun  4 05:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:32:47] drwx------ 4 boincer umatlas      4096 Jun  4 05:40 pilot3
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas 176926221 Jun  4 08:31 HITS.45006595._052406.pool.root.1
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas      6227 Jun  4 08:31 init_data.xml
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas       530 Jun  4 08:31 boinc_task_state.xml
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas      1061 Jun  4 08:32 memory_monitor_summary.json
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas    378571 Jun  4 08:32 log.45006595._052406.job.log.tgz.1
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas        95 Jun  4 08:32 pilot_heartbeat.json
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas      7753 Jun  4 08:32 heartbeat.json
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas        28 Jun  4 08:32 wrapper_checkpoint.txt
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 08:32 boinc_mmap_file
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas      4353 Jun  4 08:32 pilotlog.txt
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas    890173 Jun  4 08:32 log.45006595._052406.job.log.1
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas       357 Jun  4 08:32 output.list
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas       620 Jun  4 08:32 runtime_log
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas   1290240 Jun  4 08:32 result.tar.gz
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas      8657 Jun  4 08:32 runtime_log.err
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas       661 Jun  4 08:32 38HLDmknug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsCnKDmtkfvbm.diag
[2025-06-04 08:32:47] -rw-r--r-- 1 boincer umatlas     20881 Jun  4 08:32 stderr.txt
[2025-06-04 08:32:47] HITS file was successfully produced:
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas 176926221 Jun  4 08:31 shared/HITS.pool.root.1
[2025-06-04 08:32:47]  *** Contents of shared directory: ***
[2025-06-04 08:32:47] total 387324
[2025-06-04 08:32:47] -rw-r--r-- 2 boincer umatlas 217866947 Jun  4 05:39 ATLAS.root_0
[2025-06-04 08:32:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:39 start_atlas.sh
[2025-06-04 08:32:47] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 05:39 input.tar.gz
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas 176926221 Jun  4 08:31 HITS.pool.root.1
[2025-06-04 08:32:47] -rw------- 1 boincer umatlas   1290240 Jun  4 08:32 result.tar.gz
08:32:49 (29280): run_atlas exited; CPU time 44407.307135
08:32:49 (29280): called boinc_finish(0)

</stderr_txt>
]]>

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