Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:41:08 (9433): wrapper (7.7.26015): starting
21:41:08 (9433): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:41:08] Arguments: --nthreads 8
[2025-06-04 21:41:08] Threads: 8
[2025-06-04 21:41:08] Checking for CVMFS
[2025-06-04 21:41:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:41:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:41:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:41:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:41:11] 2.11.2.0 4277 33629 96796 146792 1 158 18816713 25165824 3585 130560 0 16870771 99.775 18602858 2173 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 21:41:11] CVMFS is ok
[2025-06-04 21:41:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:41:11] Checking for apptainer binary...
[2025-06-04 21:41:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:41:11] Running /usr/bin/apptainer --version
[2025-06-04 21:41:11] apptainer version 1.3.2-1.el7
[2025-06-04 21:41:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:41:23] cg-vwn279.simple-grid.lan
[2025-06-04 21:41:23] apptainer works
[2025-06-04 21:41:23] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:41:23] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:41:23] Starting ATLAS job with PandaID=6678313575
[2025-06-04 21:41:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:48:05]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:48:05] 2025-06-04 23:42:20,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:48:05] 2025-06-04 23:42:22,928 | INFO     | monitor loop #988: job 0:6678313575 is in state 'finished'
[2025-06-05 01:48:05] 2025-06-04 23:42:22,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:48:05] 2025-06-04 23:42:24,190 | INFO     | PID=13548 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 01:48:05] 2025-06-04 23:42:24,190 | INFO     | .. there are 9 such processes running
[2025-06-05 01:48:05] 2025-06-04 23:42:25,205 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:48:05] 2025-06-04 23:42:25,206 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6678313575/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:48:05] 2025-06-04 23:42:25,207 | INFO     | extracted standard info from prmon json
[2025-06-05 01:48:05] 2025-06-04 23:42:25,207 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:48:05] 2025-06-04 23:42:25,207 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:48:05] 2025-06-04 23:42:25,207 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:48:05] 2025-06-04 23:42:25,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:48:05] 2025-06-04 23:42:25,212 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:48:05] 2025-06-04 23:42:25,213 | INFO     | sum of square deviations: 4024149870.0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,215 | INFO     | sum of deviations: -3935810707.0000005
[2025-06-05 01:48:05] 2025-06-04 23:42:25,215 | INFO     | mean x: 1749073302.0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,215 | INFO     | mean y: 2504690.208510638
[2025-06-05 01:48:05] 2025-06-04 23:42:25,215 | INFO     | -- intersect: 1713181889.5493605
[2025-06-05 01:48:05] 2025-06-04 23:42:25,215 | INFO     | intersect: 1713181889.5493605
[2025-06-05 01:48:05] 2025-06-04 23:42:25,216 | INFO     | chi2: 1.744908273687972
[2025-06-05 01:48:05] 2025-06-04 23:42:25,216 | INFO     | sum of square deviations: 3772712597.5
[2025-06-05 01:48:05] 2025-06-04 23:42:25,227 | INFO     | sum of deviations: -3771734187.9999957
[2025-06-05 01:48:05] 2025-06-04 23:42:25,227 | INFO     | mean x: 1749073149.5
[2025-06-05 01:48:05] 2025-06-04 23:42:25,227 | INFO     | mean y: 2504789.7391304346
[2025-06-05 01:48:05] 2025-06-04 23:42:25,227 | INFO     | -- intersect: 1751124337.2905467
[2025-06-05 01:48:05] 2025-06-04 23:42:25,227 | INFO     | intersect: 1751124337.2905467
[2025-06-05 01:48:05] 2025-06-04 23:42:25,228 | INFO     | chi2: 1.7447698145052242
[2025-06-05 01:48:05] 2025-06-04 23:42:25,228 | INFO     | current chi2=1.7447698145052242 (change=0.007935040760346358 %)
[2025-06-05 01:48:05] 2025-06-04 23:42:25,228 | INFO     | right removable region: 229
[2025-06-05 01:48:05] 2025-06-04 23:42:25,228 | INFO     | sum of square deviations: 3772712597.5
[2025-06-05 01:48:05] 2025-06-04 23:42:25,230 | INFO     | sum of deviations: -41729579304.0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,230 | INFO     | mean x: 1749073454.5
[2025-06-05 01:48:05] 2025-06-04 23:42:25,230 | INFO     | mean y: 2527410.356521739
[2025-06-05 01:48:05] 2025-06-04 23:42:25,230 | INFO     | -- intersect: 19348845885.939526
[2025-06-05 01:48:05] 2025-06-04 23:42:25,230 | INFO     | intersect: 19348845885.939526
[2025-06-05 01:48:05] 2025-06-04 23:42:25,230 | INFO     | chi2: 0.20503826231696953
[2025-06-05 01:48:05] 2025-06-04 23:42:25,231 | INFO     | current chi2=0.20503826231696953 (change=88.24933863809308 %)
[2025-06-05 01:48:05] 2025-06-04 23:42:25,231 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,233 | INFO     | sum of deviations: -37881185196.0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,233 | INFO     | mean x: 1749073607.0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,233 | INFO     | mean y: 2524946.5822222224
[2025-06-05 01:48:05] 2025-06-04 23:42:25,233 | INFO     | -- intersect: 18761721994.907143
[2025-06-05 01:48:05] 2025-06-04 23:42:25,233 | INFO     | intersect: 18761721994.907143
[2025-06-05 01:48:05] 2025-06-04 23:42:25,233 | INFO     | chi2: 0.19448202718709304
[2025-06-05 01:48:05] 2025-06-04 23:42:25,234 | INFO     | current chi2=0.19448202718709304 (change=5.148422060638403 %)
[2025-06-05 01:48:05] 2025-06-04 23:42:25,234 | INFO     | left removable region: 20
[2025-06-05 01:48:05] 2025-06-04 23:42:25,234 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,244 | INFO     | sum of deviations: -22321968510.000004
[2025-06-05 01:48:05] 2025-06-04 23:42:25,244 | INFO     | mean x: 1749073729.0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,244 | INFO     | mean y: 2515201.8038277514
[2025-06-05 01:48:05] 2025-06-04 23:42:25,244 | INFO     | -- intersect: 13794706369.80861
[2025-06-05 01:48:05] 2025-06-04 23:42:25,244 | INFO     | intersect: 13794706369.80861
[2025-06-05 01:48:05] 2025-06-04 23:42:25,245 | INFO     | chi2: 0.1557280210451139
[2025-06-05 01:48:05] 2025-06-04 23:42:25,245 | INFO     | -- intersect: 13794706369.80861
[2025-06-05 01:48:05] 2025-06-04 23:42:25,245 | INFO     | current memory leak: -7.89 B/s (using 209 data points, chi2=0.16)
[2025-06-05 01:48:05] 2025-06-04 23:42:25,246 | INFO     | ..............................
[2025-06-05 01:48:05] 2025-06-04 23:42:25,246 | INFO     | . Timing measurements:
[2025-06-05 01:48:05] 2025-06-04 23:42:25,246 | INFO     | . get job = 0 s
[2025-06-05 01:48:05] 2025-06-04 23:42:25,246 | INFO     | . initial setup = 2 s
[2025-06-05 01:48:05] 2025-06-04 23:42:25,246 | INFO     | . payload setup = 15 s
[2025-06-05 01:48:05] 2025-06-04 23:42:25,247 | INFO     | . stage-in = 0 s
[2025-06-05 01:48:05] 2025-06-04 23:42:25,247 | INFO     | . payload execution = 14360 s
[2025-06-05 01:48:05] 2025-06-04 23:42:25,247 | INFO     | . stage-out = 2 s
[2025-06-05 01:48:05] 2025-06-04 23:42:25,247 | INFO     | . log creation = 0 s
[2025-06-05 01:48:05] 2025-06-04 23:42:25,247 | INFO     | ..............................
[2025-06-05 01:48:05] 2025-06-04 23:42:25,842 | INFO     | 
[2025-06-05 01:48:05] 2025-06-04 23:42:25,842 | INFO     | job summary report
[2025-06-05 01:48:05] 2025-06-04 23:42:25,842 | INFO     | --------------------------------------------------
[2025-06-05 01:48:05] 2025-06-04 23:42:25,842 | INFO     | PanDA job id: 6678313575
[2025-06-05 01:48:05] 2025-06-04 23:42:25,842 | INFO     | task id: 45006595
[2025-06-05 01:48:05] 2025-06-04 23:42:25,842 | INFO     | errors: (none)
[2025-06-05 01:48:05] 2025-06-04 23:42:25,842 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:48:05] 2025-06-04 23:42:25,843 | INFO     | pilot state: finished 
[2025-06-05 01:48:05] 2025-06-04 23:42:25,843 | INFO     | transexitcode: 0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,843 | INFO     | exeerrorcode: 0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,843 | INFO     | exeerrordiag: 
[2025-06-05 01:48:05] 2025-06-04 23:42:25,843 | INFO     | exitcode: 0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,843 | INFO     | exitmsg: OK
[2025-06-05 01:48:05] 2025-06-04 23:42:25,843 | INFO     | cpuconsumptiontime: 53306 s
[2025-06-05 01:48:05] 2025-06-04 23:42:25,843 | INFO     | nevents: 400
[2025-06-05 01:48:05] 2025-06-04 23:42:25,843 | INFO     | neventsw: 0
[2025-06-05 01:48:05] 2025-06-04 23:42:25,843 | INFO     | pid: 22418
[2025-06-05 01:48:05] 2025-06-04 23:42:25,844 | INFO     | pgrp: 22418
[2025-06-05 01:48:05] 2025-06-04 23:42:25,844 | INFO     | corecount: 8
[2025-06-05 01:48:05] 2025-06-04 23:42:25,844 | INFO     | event service: False
[2025-06-05 01:48:05] 2025-06-04 23:42:25,844 | INFO     | sizes: {0: 2397170, 1: 2397369, 12: 2397603, 14379: 2427519, 14380: 2427518, 14383: 2436517, 14385: 2436701, 14421: 2436871}
[2025-06-05 01:48:05] 2025-06-04 23:42:25,844 | INFO     | --------------------------------------------------
[2025-06-05 01:48:05] 2025-06-04 23:42:25,844 | INFO     | 
[2025-06-05 01:48:05] 2025-06-04 23:42:25,844 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-05 01:48:05] 2025-06-04 23:42:26,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,364 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:48:05] 2025-06-04 23:42:26,364 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,364 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:48:05] 2025-06-04 23:42:26,364 | INFO     | job 6678313575 has completed (purged errors)
[2025-06-05 01:48:05] 2025-06-04 23:42:26,364 | INFO     | overall cleanup function is called
[2025-06-05 01:48:05] 2025-06-04 23:42:27,374 | INFO     | --- collectZombieJob: --- 10, [22418]
[2025-06-05 01:48:05] 2025-06-04 23:42:27,374 | INFO     | zombie collector waiting for pid 22418
[2025-06-05 01:48:05] 2025-06-04 23:42:27,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:48:05] 2025-06-04 23:42:27,374 | INFO     | collected zombie processes
[2025-06-05 01:48:05] 2025-06-04 23:42:27,374 | INFO     | will attempt to kill all subprocesses of pid=22418
[2025-06-05 01:48:05] 2025-06-04 23:42:27,497 | INFO     | process IDs to be killed: [22418] (in reverse order)
[2025-06-05 01:48:05] 2025-06-04 23:42:27,910 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:48:05] 2025-06-04 23:42:27,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:48:05] 2025-06-04 23:42:27,914 | INFO     | did not find any defunct processes belonging to 22418
[2025-06-05 01:48:05] 2025-06-04 23:42:27,917 | INFO     | did not find any defunct processes belonging to 22418
[2025-06-05 01:48:05] 2025-06-04 23:42:27,918 | INFO     | ready for new job
[2025-06-05 01:48:05] 2025-06-04 23:42:27,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:48:05] 2025-06-04 23:42:27,920 | INFO     | **************************************
[2025-06-05 01:48:05] 2025-06-04 23:42:27,920 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:48:05] 2025-06-04 23:42:27,920 | INFO     | **************************************
[2025-06-05 01:48:05] 2025-06-04 23:42:27,920 | INFO     | 
[2025-06-05 01:48:05] 2025-06-04 23:42:27,932 | INFO     | pilot is running in a VM
[2025-06-05 01:48:05] 2025-06-04 23:42:27,932 | INFO     | architecture information:
[2025-06-05 01:48:05] 2025-06-04 23:42:27,942 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:48:05] 2025-06-04 23:42:28,154 | INFO     | cat /etc/os-release:
[2025-06-05 01:48:05] NAME="CentOS Linux"
[2025-06-05 01:48:05] VERSION="7 (Core)"
[2025-06-05 01:48:05] ID="centos"
[2025-06-05 01:48:05] ID_LIKE="rhel fedora"
[2025-06-05 01:48:05] VERSION_ID="7"
[2025-06-05 01:48:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:48:05] ANSI_COLOR="0;31"
[2025-06-05 01:48:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:48:05] HOME_URL="https://www.centos.org/"
[2025-06-05 01:48:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:48:05] 
[2025-06-05 01:48:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:48:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:48:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:48:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:48:05] 
[2025-06-05 01:48:05] 2025-06-04 23:42:28,154 | INFO     | **************************************
[2025-06-05 01:48:05] 2025-06-04 23:42:28,658 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-05 01:48:05] 2025-06-04 23:42:28,954 | INFO     | sufficient remaining disk space (496828940288 B)
[2025-06-05 01:48:05] 2025-06-04 23:42:28,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:48:05] 2025-06-04 23:42:28,955 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:48:05] 2025-06-04 23:42:28,955 | INFO     | update_server=False
[2025-06-05 01:48:05] 2025-06-04 23:42:28,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:48:05] 2025-06-04 23:42:28,955 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:48:05] 2025-06-04 23:42:28,956 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:48:05] 2025-06-04 23:42:28,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:48:05] 2025-06-04 23:42:28,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:48:05] 2025-06-04 23:42:28,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:48:05] 2025-06-04 23:42:28,963 | INFO     | aborting loop
[2025-06-05 01:48:05] 2025-06-04 23:42:29,546 | INFO     | all data control threads have been joined
[2025-06-05 01:48:05] 2025-06-04 23:42:29,740 | INFO     | all payload control threads have been joined
[2025-06-05 01:48:05] 2025-06-04 23:42:29,961 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:29,969 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:30,023 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:30,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:48:05] 2025-06-04 23:42:30,274 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:30,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:48:05] 2025-06-04 23:42:30,549 | INFO     | all job control threads have been joined
[2025-06-05 01:48:05] 2025-06-04 23:42:30,552 | INFO     | [data] control thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:30,700 | INFO     | [job] validate thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:30,746 | INFO     | [payload] control thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:31,215 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:31,310 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:31,334 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:31,422 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:31,442 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:31,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:48:05] 2025-06-04 23:42:31,555 | INFO     | [job] control thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:32,042 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:35,507 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:39,425 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:48:05] 2025-06-04 23:42:40,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:48:05] 2025-06-04 23:42:41,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706207340352)>', '<ExcThread(monitor, started 140705435461376)>']
[2025-06-05 01:48:05] 2025-06-04 23:42:42,033 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:48:05] 2025-06-04 23:42:42,034 | INFO     | [monitor] control thread has ended
[2025-06-05 01:48:05] 2025-06-04 23:42:47,005 | INFO     | all workflow threads have been joined
[2025-06-05 01:48:05] 2025-06-04 23:42:47,005 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:48:05] 2025-06-04 23:42:47,005 | INFO     | traces error code: 0
[2025-06-05 01:48:05] 2025-06-04 23:42:47,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:48:05] 2025-06-04 23:42:47,226 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:48:05] 2025-06-04 23:42:47,296 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:48:05] 2025-06-04 23:42:47,331 [wrapper] pilotpid: 13548
[2025-06-05 01:48:05] 2025-06-04 23:42:47,360 [wrapper] Pilot exit status: 0
[2025-06-05 01:48:05] 2025-06-04 23:42:47,723 [wrapper] pandaids: 6678313575
[2025-06-05 01:48:05] 2025-06-04 23:42:48,691 [wrapper] cleanup supervisor_pilot 13459 13549
[2025-06-05 01:48:05] 2025-06-04 23:42:48,731 [wrapper] Test setup, not cleaning
[2025-06-05 01:48:05] 2025-06-04 23:42:48,785 [wrapper] apfmon messages muted
[2025-06-05 01:48:05] 2025-06-04 23:42:48,846 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:48:05] 2025-06-04 23:42:48,918 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:48:05]  *** Error codes and diagnostics ***
[2025-06-05 01:48:05]     "exeErrorCode": 0,
[2025-06-05 01:48:05]     "exeErrorDiag": "",
[2025-06-05 01:48:05]     "pilotErrorCode": 0,
[2025-06-05 01:48:05]     "pilotErrorDiag": "",
[2025-06-05 01:48:05]  *** Listing of results directory ***
[2025-06-05 01:48:05] total 395128
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc      5111 Jun  4 06:29 queuedata.json
[2025-06-05 01:48:05] -rwx------. 1 boinc boinc     37140 Jun  4 06:29 runpilot2-wrapper.sh
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc       100 Jun  4 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:48:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 21:41 run_atlas
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc       105 Jun  4 21:41 job.xml
[2025-06-05 01:48:05] -rw-r--r--. 2 boinc boinc 215879275 Jun  4 21:41 EVNT.45006593._002105.pool.root.1
[2025-06-05 01:48:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:41 start_atlas.sh
[2025-06-05 01:48:05] drwxrwx--x. 2 boinc boinc        68 Jun  4 21:41 shared
[2025-06-05 01:48:05] -rw-r--r--. 2 boinc boinc    508876 Jun  4 21:41 input.tar.gz
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc      6392 Jun  4 21:41 init_data.xml
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc         0 Jun  4 21:41 boinc_lockfile
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc      2524 Jun  4 21:41 pandaJob.out
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc    991007 Jun  4 21:41 agis_schedconf.cvmfs.json
[2025-06-05 01:48:05] drwx------. 4 boinc boinc      4096 Jun  4 21:41 pilot3
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc 181667348 Jun  5 01:41 HITS.45006595._052555.pool.root.1
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc       531 Jun  5 01:41 boinc_task_state.xml
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc      1020 Jun  5 01:41 memory_monitor_summary.json
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc   1598969 Jun  5 01:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc    378149 Jun  5 01:41 log.45006595._052555.job.log.tgz.1
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc        95 Jun  5 01:42 pilot_heartbeat.json
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc      7692 Jun  5 01:42 heartbeat.json
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc      4612 Jun  5 01:42 pilotlog.txt
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc   1245481 Jun  5 01:42 log.45006595._052555.job.log.1
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc       357 Jun  5 01:42 output.list
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc       620 Jun  5 01:42 runtime_log
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc   1638400 Jun  5 01:42 result.tar.gz
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc      8673 Jun  5 01:42 runtime_log.err
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc       657 Jun  5 01:42 fMzNDm1vug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDFnKDmTXyZFn.diag
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc      8192 Jun  5 01:48 boinc_mmap_file
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc        28 Jun  5 01:48 wrapper_checkpoint.txt
[2025-06-05 01:48:05] -rw-r--r--. 1 boinc boinc     20807 Jun  5 01:48 stderr.txt
[2025-06-05 01:48:05] HITS file was successfully produced:
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc 181667348 Jun  5 01:41 shared/HITS.pool.root.1
[2025-06-05 01:48:05]  *** Contents of shared directory: ***
[2025-06-05 01:48:05] total 390348
[2025-06-05 01:48:05] -rw-r--r--. 2 boinc boinc 215879275 Jun  4 21:41 ATLAS.root_0
[2025-06-05 01:48:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:41 start_atlas.sh
[2025-06-05 01:48:05] -rw-r--r--. 2 boinc boinc    508876 Jun  4 21:41 input.tar.gz
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc 181667348 Jun  5 01:41 HITS.pool.root.1
[2025-06-05 01:48:05] -rw-------. 1 boinc boinc   1638400 Jun  5 01:42 result.tar.gz
01:48:07 (9433): run_atlas exited; CPU time 53495.800419
01:48:07 (9433): called boinc_finish(0)

</stderr_txt>
]]>

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