Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:45:41 (21648): wrapper (7.7.26015): starting
21:45:41 (21648): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:45:41] Arguments: --nthreads 8
[2025-06-04 21:45:41] Threads: 8
[2025-06-04 21:45:41] Checking for CVMFS
[2025-06-04 21:45:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:45:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:45:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:45:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:45:43] 2.11.2.0 18352 33827 94040 146792 3 158 12927009 25165825 3198 130560 0 18176831 99.789 20359095 4396 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 21:45:43] CVMFS is ok
[2025-06-04 21:45:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:45:43] Checking for apptainer binary...
[2025-06-04 21:45:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:45:43] Running /usr/bin/apptainer --version
[2025-06-04 21:45:43] apptainer version 1.3.2-1.el7
[2025-06-04 21:45:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:45:55] cg-vwn313.simple-grid.lan
[2025-06-04 21:45:55] apptainer works
[2025-06-04 21:45:55] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:45:55] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:45:55] Starting ATLAS job with PandaID=6678312681
[2025-06-04 21:45:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:01:56]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:01:56] 2025-06-04 23:34:01,923 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6678312681/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:01:56] 2025-06-04 23:34:01,923 | INFO     | extracted standard info from prmon json
[2025-06-05 02:01:56] 2025-06-04 23:34:01,923 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:01:56] 2025-06-04 23:34:01,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:01:56] 2025-06-04 23:34:01,924 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:01:56] 2025-06-04 23:34:01,924 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:01:56] 2025-06-04 23:34:01,929 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:01:56] 2025-06-04 23:34:01,930 | INFO     | sum of square deviations: 3392567795.5
[2025-06-05 02:01:56] 2025-06-04 23:34:01,932 | INFO     | sum of deviations: -5325707205.500002
[2025-06-05 02:01:56] 2025-06-04 23:34:01,932 | INFO     | mean x: 1749073175.5
[2025-06-05 02:01:56] 2025-06-04 23:34:01,932 | INFO     | mean y: 2488464.1666666665
[2025-06-05 02:01:56] 2025-06-04 23:34:01,932 | INFO     | -- intersect: 2748211519.742114
[2025-06-05 02:01:56] 2025-06-04 23:34:01,932 | INFO     | intersect: 2748211519.742114
[2025-06-05 02:01:56] 2025-06-04 23:34:01,933 | INFO     | chi2: 2.455962020003325
[2025-06-05 02:01:56] 2025-06-04 23:34:01,933 | INFO     | sum of square deviations: 3168461268.0
[2025-06-05 02:01:56] 2025-06-04 23:34:01,942 | INFO     | sum of deviations: 9357551157.999992
[2025-06-05 02:01:56] 2025-06-04 23:34:01,942 | INFO     | mean x: 1749073023.0
[2025-06-05 02:01:56] 2025-06-04 23:34:01,942 | INFO     | mean y: 2498273.880184332
[2025-06-05 02:01:56] 2025-06-04 23:34:01,943 | INFO     | -- intersect: -5163113329.802578
[2025-06-05 02:01:56] 2025-06-04 23:34:01,943 | INFO     | intersect: -5163113329.802578
[2025-06-05 02:01:56] 2025-06-04 23:34:01,943 | INFO     | chi2: 1.6908438817111933
[2025-06-05 02:01:56] 2025-06-04 23:34:01,949 | INFO     | current chi2=1.6908438817111933 (change=31.15350042306827 %)
[2025-06-05 02:01:56] 2025-06-04 23:34:01,950 | INFO     | sum of square deviations: 2954447953.0
[2025-06-05 02:01:56] 2025-06-04 23:34:01,952 | INFO     | sum of deviations: 9140633602.499998
[2025-06-05 02:01:56] 2025-06-04 23:34:01,952 | INFO     | mean x: 1749072870.5
[2025-06-05 02:01:56] 2025-06-04 23:34:01,952 | INFO     | mean y: 2498119.3066037735
[2025-06-05 02:01:56] 2025-06-04 23:34:01,952 | INFO     | -- intersect: -5408879744.730329
[2025-06-05 02:01:56] 2025-06-04 23:34:01,952 | INFO     | intersect: -5408879744.730329
[2025-06-05 02:01:56] 2025-06-04 23:34:01,953 | INFO     | chi2: 1.6914911023393653
[2025-06-05 02:01:56] 2025-06-04 23:34:01,953 | INFO     | current chi2=1.6914911023393653 (change=-0.03827796493647943 %)
[2025-06-05 02:01:56] 2025-06-04 23:34:01,953 | INFO     | right removable region: 211
[2025-06-05 02:01:56] 2025-06-04 23:34:01,953 | INFO     | sum of square deviations: 3168461268.0
[2025-06-05 02:01:56] 2025-06-04 23:34:01,955 | INFO     | sum of deviations: -40542301290.0
[2025-06-05 02:01:56] 2025-06-04 23:34:01,955 | INFO     | mean x: 1749073328.0
[2025-06-05 02:01:56] 2025-06-04 23:34:01,956 | INFO     | mean y: 2512203.050691244
[2025-06-05 02:01:56] 2025-06-04 23:34:01,956 | INFO     | -- intersect: 22382920812.82354
[2025-06-05 02:01:56] 2025-06-04 23:34:01,956 | INFO     | intersect: 22382920812.82354
[2025-06-05 02:01:56] 2025-06-04 23:34:01,956 | INFO     | chi2: 0.9549590310868669
[2025-06-05 02:01:56] 2025-06-04 23:34:01,956 | INFO     | current chi2=0.9549590310868669 (change=61.116701996654896 %)
[2025-06-05 02:01:56] 2025-06-04 23:34:01,957 | INFO     | sum of square deviations: 2954447953.0
[2025-06-05 02:01:56] 2025-06-04 23:34:01,959 | INFO     | sum of deviations: -39853963778.5
[2025-06-05 02:01:56] 2025-06-04 23:34:01,959 | INFO     | mean x: 1749073480.5
[2025-06-05 02:01:56] 2025-06-04 23:34:01,959 | INFO     | mean y: 2511674.7783018867
[2025-06-05 02:01:56] 2025-06-04 23:34:01,959 | INFO     | -- intersect: 23596601754.110943
[2025-06-05 02:01:56] 2025-06-04 23:34:01,959 | INFO     | intersect: 23596601754.110943
[2025-06-05 02:01:56] 2025-06-04 23:34:01,959 | INFO     | chi2: 0.938829231595255
[2025-06-05 02:01:56] 2025-06-04 23:34:01,960 | INFO     | current chi2=0.938829231595255 (change=1.6890566994538045 %)
[2025-06-05 02:01:56] 2025-06-04 23:34:01,960 | INFO     | left removable region: 20
[2025-06-05 02:01:56] 2025-06-04 23:34:01,960 | INFO     | sum of square deviations: 2160561440.0
[2025-06-05 02:01:56] 2025-06-04 23:34:01,961 | INFO     | sum of deviations: -10812175946.0
[2025-06-05 02:01:56] 2025-06-04 23:34:01,962 | INFO     | mean x: 1749073450.0
[2025-06-05 02:01:56] 2025-06-04 23:34:01,962 | INFO     | mean y: 2511427.8534031413
[2025-06-05 02:01:56] 2025-06-04 23:34:01,962 | INFO     | -- intersect: 8755463106.87496
[2025-06-05 02:01:56] 2025-06-04 23:34:01,962 | INFO     | intersect: 8755463106.87496
[2025-06-05 02:01:56] 2025-06-04 23:34:01,962 | INFO     | chi2: 0.10012883487512746
[2025-06-05 02:01:56] 2025-06-04 23:34:01,962 | INFO     | -- intersect: 8755463106.87496
[2025-06-05 02:01:56] 2025-06-04 23:34:01,962 | INFO     | current memory leak: -5.00 B/s (using 191 data points, chi2=0.10)
[2025-06-05 02:01:56] 2025-06-04 23:34:01,963 | INFO     | ..............................
[2025-06-05 02:01:56] 2025-06-04 23:34:01,963 | INFO     | . Timing measurements:
[2025-06-05 02:01:56] 2025-06-04 23:34:01,963 | INFO     | . get job = 0 s
[2025-06-05 02:01:56] 2025-06-04 23:34:01,964 | INFO     | . initial setup = 4 s
[2025-06-05 02:01:56] 2025-06-04 23:34:01,964 | INFO     | . payload setup = 14 s
[2025-06-05 02:01:56] 2025-06-04 23:34:01,964 | INFO     | . stage-in = 0 s
[2025-06-05 02:01:56] 2025-06-04 23:34:01,964 | INFO     | . payload execution = 13532 s
[2025-06-05 02:01:56] 2025-06-04 23:34:01,964 | INFO     | . stage-out = 4 s
[2025-06-05 02:01:56] 2025-06-04 23:34:01,964 | INFO     | . log creation = 1 s
[2025-06-05 02:01:56] 2025-06-04 23:34:01,964 | INFO     | ..............................
[2025-06-05 02:01:56] 2025-06-04 23:34:02,131 | INFO     | 
[2025-06-05 02:01:56] 2025-06-04 23:34:02,132 | INFO     | job summary report
[2025-06-05 02:01:56] 2025-06-04 23:34:02,132 | INFO     | --------------------------------------------------
[2025-06-05 02:01:56] 2025-06-04 23:34:02,132 | INFO     | PanDA job id: 6678312681
[2025-06-05 02:01:56] 2025-06-04 23:34:02,132 | INFO     | task id: 45006595
[2025-06-05 02:01:56] 2025-06-04 23:34:02,132 | INFO     | errors: (none)
[2025-06-05 02:01:56] 2025-06-04 23:34:02,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:01:56] 2025-06-04 23:34:02,132 | INFO     | pilot state: finished 
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | transexitcode: 0
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | exeerrorcode: 0
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | exeerrordiag: 
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | exitcode: 0
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | exitmsg: OK
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | cpuconsumptiontime: 51470 s
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | nevents: 400
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | neventsw: 0
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | pid: 1510
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | pgrp: 1510
[2025-06-05 02:01:56] 2025-06-04 23:34:02,133 | INFO     | corecount: 8
[2025-06-05 02:01:56] 2025-06-04 23:34:02,134 | INFO     | event service: False
[2025-06-05 02:01:56] 2025-06-04 23:34:02,134 | INFO     | sizes: {0: 2397116, 1: 2397371, 2: 2397371, 10: 2397605, 12: 2397633, 13551: 2427388, 13556: 2436387, 13643: 2436501}
[2025-06-05 02:01:56] 2025-06-04 23:34:02,134 | INFO     | --------------------------------------------------
[2025-06-05 02:01:56] 2025-06-04 23:34:02,134 | INFO     | 
[2025-06-05 02:01:56] 2025-06-04 23:34:02,134 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-05 02:01:56] 2025-06-04 23:34:02,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,480 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,480 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,482 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:01:56] 2025-06-04 23:34:02,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,482 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:01:56] 2025-06-04 23:34:02,482 | INFO     | job 6678312681 has completed (purged errors)
[2025-06-05 02:01:56] 2025-06-04 23:34:02,483 | INFO     | overall cleanup function is called
[2025-06-05 02:01:56] 2025-06-04 23:34:03,493 | INFO     | --- collectZombieJob: --- 10, [1510]
[2025-06-05 02:01:56] 2025-06-04 23:34:03,494 | INFO     | zombie collector waiting for pid 1510
[2025-06-05 02:01:56] 2025-06-04 23:34:03,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:01:56] 2025-06-04 23:34:03,494 | INFO     | collected zombie processes
[2025-06-05 02:01:56] 2025-06-04 23:34:03,494 | INFO     | will attempt to kill all subprocesses of pid=1510
[2025-06-05 02:01:56] 2025-06-04 23:34:03,628 | INFO     | process IDs to be killed: [1510] (in reverse order)
[2025-06-05 02:01:56] 2025-06-04 23:34:04,318 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:01:56] 2025-06-04 23:34:04,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:01:56] 2025-06-04 23:34:04,321 | INFO     | did not find any defunct processes belonging to 1510
[2025-06-05 02:01:56] 2025-06-04 23:34:04,325 | INFO     | did not find any defunct processes belonging to 1510
[2025-06-05 02:01:56] 2025-06-04 23:34:04,325 | INFO     | ready for new job
[2025-06-05 02:01:56] 2025-06-04 23:34:04,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:01:56] 2025-06-04 23:34:04,328 | INFO     | **************************************
[2025-06-05 02:01:56] 2025-06-04 23:34:04,328 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:01:56] 2025-06-04 23:34:04,328 | INFO     | **************************************
[2025-06-05 02:01:56] 2025-06-04 23:34:04,328 | INFO     | 
[2025-06-05 02:01:56] 2025-06-04 23:34:04,329 | INFO     | pilot is running in a VM
[2025-06-05 02:01:56] 2025-06-04 23:34:04,329 | INFO     | architecture information:
[2025-06-05 02:01:56] 2025-06-04 23:34:04,333 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:01:56] 2025-06-04 23:34:04,546 | INFO     | cat /etc/os-release:
[2025-06-05 02:01:56] NAME="CentOS Linux"
[2025-06-05 02:01:56] VERSION="7 (Core)"
[2025-06-05 02:01:56] ID="centos"
[2025-06-05 02:01:56] ID_LIKE="rhel fedora"
[2025-06-05 02:01:56] VERSION_ID="7"
[2025-06-05 02:01:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:01:56] ANSI_COLOR="0;31"
[2025-06-05 02:01:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:01:56] HOME_URL="https://www.centos.org/"
[2025-06-05 02:01:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:01:56] 
[2025-06-05 02:01:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:01:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:01:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:01:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:01:56] 
[2025-06-05 02:01:56] 2025-06-04 23:34:04,546 | INFO     | **************************************
[2025-06-05 02:01:56] 2025-06-04 23:34:05,050 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-05 02:01:56] 2025-06-04 23:34:05,315 | INFO     | sufficient remaining disk space (497471717376 B)
[2025-06-05 02:01:56] 2025-06-04 23:34:05,315 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:01:56] 2025-06-04 23:34:05,316 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:01:56] 2025-06-04 23:34:05,316 | INFO     | update_server=False
[2025-06-05 02:01:56] 2025-06-04 23:34:05,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:01:56] 2025-06-04 23:34:05,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:01:56] 2025-06-04 23:34:05,658 | INFO     | aborting loop
[2025-06-05 02:01:56] 2025-06-04 23:34:05,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:01:56] 2025-06-04 23:34:05,832 | INFO     | all data control threads have been joined
[2025-06-05 02:01:56] 2025-06-04 23:34:05,917 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:01:56] 2025-06-04 23:34:05,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:01:56] 2025-06-04 23:34:05,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:01:56] 2025-06-04 23:34:06,317 | INFO     | all payload control threads have been joined
[2025-06-05 02:01:56] 2025-06-04 23:34:06,321 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:06,467 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:06,663 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:06,674 | INFO     | all job control threads have been joined
[2025-06-05 02:01:56] 2025-06-04 23:34:06,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:01:56] 2025-06-04 23:34:06,837 | INFO     | [data] control thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:07,123 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:07,147 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:07,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:01:56] 2025-06-04 23:34:07,176 | INFO     | [job] validate thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:07,323 | INFO     | [payload] control thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:07,369 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:07,542 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:07,622 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:07,680 | INFO     | [job] control thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:07,704 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:07,782 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:08,160 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:10,828 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:01:56] 2025-06-04 23:34:12,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550409807680)>', '<ExcThread(monitor, started 140549801613056)>']
[2025-06-05 02:01:56] 2025-06-04 23:34:12,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:01:56] 2025-06-04 23:34:12,960 | INFO     | [monitor] control thread has ended
[2025-06-05 02:01:56] 2025-06-04 23:34:17,197 | INFO     | all workflow threads have been joined
[2025-06-05 02:01:56] 2025-06-04 23:34:17,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:01:56] 2025-06-04 23:34:17,198 | INFO     | traces error code: 0
[2025-06-05 02:01:56] 2025-06-04 23:34:17,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:01:56] 2025-06-04 23:34:17,561 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:01:56] 2025-06-04 23:34:17,630 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:01:56] 2025-06-04 23:34:17,668 [wrapper] pilotpid: 25509
[2025-06-05 02:01:56] 2025-06-04 23:34:17,762 [wrapper] Pilot exit status: 0
[2025-06-05 02:01:56] 2025-06-04 23:34:18,252 [wrapper] pandaids: 6678312681
[2025-06-05 02:01:56] 2025-06-04 23:34:19,293 [wrapper] cleanup supervisor_pilot 19024 25510
[2025-06-05 02:01:56] 2025-06-04 23:34:19,383 [wrapper] Test setup, not cleaning
[2025-06-05 02:01:56] 2025-06-04 23:34:19,442 [wrapper] apfmon messages muted
[2025-06-05 02:01:56] 2025-06-04 23:34:19,506 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:01:56] 2025-06-04 23:34:19,574 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:01:56]  *** Error codes and diagnostics ***
[2025-06-05 02:01:56]     "exeErrorCode": 0,
[2025-06-05 02:01:56]     "exeErrorDiag": "",
[2025-06-05 02:01:56]     "pilotErrorCode": 0,
[2025-06-05 02:01:56]     "pilotErrorDiag": "",
[2025-06-05 02:01:56]  *** Listing of results directory ***
[2025-06-05 02:01:56] total 396436
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc      5111 Jun  4 06:09 queuedata.json
[2025-06-05 02:01:56] -rwx------. 1 boinc boinc     37140 Jun  4 06:11 runpilot2-wrapper.sh
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc       100 Jun  4 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:01:56] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 21:45 run_atlas
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc       105 Jun  4 21:45 job.xml
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc      6392 Jun  4 21:45 init_data.xml
[2025-06-05 02:01:56] -rw-r--r--. 2 boinc boinc 216433074 Jun  4 21:45 EVNT.45006593._002087.pool.root.1
[2025-06-05 02:01:56] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:45 start_atlas.sh
[2025-06-05 02:01:56] drwxrwx--x. 2 boinc boinc        68 Jun  4 21:45 shared
[2025-06-05 02:01:56] -rw-r--r--. 2 boinc boinc    508882 Jun  4 21:45 input.tar.gz
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc         0 Jun  4 21:45 boinc_lockfile
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc      2525 Jun  4 21:45 pandaJob.out
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc    991007 Jun  4 21:46 agis_schedconf.cvmfs.json
[2025-06-05 02:01:56] drwx------. 4 boinc boinc      4096 Jun  4 21:46 pilot3
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc 182539713 Jun  5 01:31 HITS.45006595._052127.pool.root.1
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc       531 Jun  5 01:31 boinc_task_state.xml
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc      1031 Jun  5 01:32 memory_monitor_summary.json
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc   1598969 Jun  5 01:32 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc    398284 Jun  5 01:32 log.45006595._052127.job.log.tgz.1
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc        95 Jun  5 01:33 pilot_heartbeat.json
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc      7685 Jun  5 01:34 heartbeat.json
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc      4417 Jun  5 01:34 pilotlog.txt
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc   1183576 Jun  5 01:34 log.45006595._052127.job.log.1
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc       357 Jun  5 01:34 output.list
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc       620 Jun  5 01:34 runtime_log
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc   1597440 Jun  5 01:34 result.tar.gz
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc       657 Jun  5 01:34 ZFfLDmceug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm78mKDmx9fopn.diag
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc      8673 Jun  5 01:34 runtime_log.err
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc      8192 Jun  5 02:01 boinc_mmap_file
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc        28 Jun  5 02:01 wrapper_checkpoint.txt
[2025-06-05 02:01:56] -rw-r--r--. 1 boinc boinc     20472 Jun  5 02:01 stderr.txt
[2025-06-05 02:01:56] HITS file was successfully produced:
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc 182539713 Jun  5 01:31 shared/HITS.pool.root.1
[2025-06-05 02:01:56]  *** Contents of shared directory: ***
[2025-06-05 02:01:56] total 391704
[2025-06-05 02:01:56] -rw-r--r--. 2 boinc boinc 216433074 Jun  4 21:45 ATLAS.root_0
[2025-06-05 02:01:56] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:45 start_atlas.sh
[2025-06-05 02:01:56] -rw-r--r--. 2 boinc boinc    508882 Jun  4 21:45 input.tar.gz
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc 182539713 Jun  5 01:31 HITS.pool.root.1
[2025-06-05 02:01:56] -rw-------. 1 boinc boinc   1597440 Jun  5 01:34 result.tar.gz
02:01:58 (21648): run_atlas exited; CPU time 51646.718574
02:01:58 (21648): called boinc_finish(0)

</stderr_txt>
]]>

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