Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:42:51 (7125): wrapper (7.7.26015): starting
05:42:51 (7125): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 05:42:51] Arguments: --nthreads 12
[2025-06-04 05:42:51] Threads: 12
[2025-06-04 05:42:51] Checking for CVMFS
[2025-06-04 05:42:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:42:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:42:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:42:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:42:52] 2.11.2.0 2979 35516 92952 146775 2 56 18859341 20275201 1 130560 0 15720287 99.983 6179481 7491 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 05:42:52] CVMFS is ok
[2025-06-04 05:42:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:42:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:42:52] Further information can be found at the LHC@home message board.
[2025-06-04 05:42:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:42:52] Checking for apptainer binary...
[2025-06-04 05:42:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:42:52] Running /usr/bin/apptainer --version
[2025-06-04 05:42:52] apptainer version 1.3.2-1.el7
[2025-06-04 05:42:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:42:53] c-205-7.aglt2.org
[2025-06-04 05:42:53] apptainer works
[2025-06-04 05:42:53] Set ATHENA_PROC_NUMBER=12
[2025-06-04 05:42:53] Set ATHENA_CORE_NUMBER=12
[2025-06-04 05:42:53] Starting ATLAS job with PandaID=6678313618
[2025-06-04 05:42:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:48:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:48:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 06:48:51]  is_altstaged=None
[2025-06-04 06:48:51]  is_tar=False
[2025-06-04 06:48:51]  lfn=log.45006595._052598.job.log.tgz.1
[2025-06-04 06:48:51]  mtime=0
[2025-06-04 06:48:51]  protocol_id=None
[2025-06-04 06:48:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 06:48:51]  replicas=None
[2025-06-04 06:48:51]  scope=mc23_13p6TeV
[2025-06-04 06:48:51]  status=None
[2025-06-04 06:48:51]  status_code=0
[2025-06-04 06:48:51]  storage_token=
[2025-06-04 06:48:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678313618/log.45006595._052598.job.log.tgz.1
[2025-06-04 06:48:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/46/log.45006595._052598.job.log.tgz.1
[2025-06-04 06:48:51]  workdir=None
[2025-06-04 06:48:51] ]
[2025-06-04 06:48:51] 2025-06-04 10:48:26,623 | INFO     | transferring file log.45006595._052598.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678313618/log.45006595._052598.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 06:48:51] 2025-06-04 10:48:26,623 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678313618/log.45006595._052598.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052598.job
[2025-06-04 06:48:51] 2025-06-04 10:48:26,645 | INFO     | adding to output.list: log.45006595._052598.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/46/log.45006595._052598.job.log.tg
[2025-06-04 06:48:51] 2025-06-04 10:48:26,646 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 06:48:51] 2025-06-04 10:48:26,646 | INFO     | summary of transferred files:
[2025-06-04 06:48:51] 2025-06-04 10:48:26,647 | INFO     |  -- lfn=log.45006595._052598.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 06:48:51] 2025-06-04 10:48:26,647 | INFO     | stage-out finished correctly
[2025-06-04 06:48:51] 2025-06-04 10:48:27,163 | INFO     | monitor loop #292: job 0:6678313618 is in state 'finished'
[2025-06-04 06:48:51] 2025-06-04 10:48:27,163 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:48:51] 2025-06-04 10:48:28,260 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 06:48:51] 2025-06-04 10:48:28,342 | INFO     | job 6678313618 has state=finished
[2025-06-04 06:48:51] 2025-06-04 10:48:28,342 | INFO     | preparing for final server update for job 6678313618 in state='finished'
[2025-06-04 06:48:51] 2025-06-04 10:48:28,343 | INFO     | this job has now completed (state=finished)
[2025-06-04 06:48:51] 2025-06-04 10:48:28,343 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 06:48:51] 2025-06-04 10:48:28,343 | INFO     | log transfer has been attempted: DONE
[2025-06-04 06:48:51] 2025-06-04 10:48:28,343 | INFO     | job 6678313618 has finished - writing final server update
[2025-06-04 06:48:51] 2025-06-04 10:48:28,344 | INFO     | total number of processed events: 400 (read)
[2025-06-04 06:48:51] 2025-06-04 10:48:28,345 | INFO     | executing command: lscpu
[2025-06-04 06:48:51] 2025-06-04 10:48:28,371 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 06:48:51] 2025-06-04 10:48:29,326 | INFO     | PID=10760 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 06:48:51] 2025-06-04 10:48:29,666 | INFO     | monitor loop #293: job 0:6678313618 is in state 'finished'
[2025-06-04 06:48:51] 2025-06-04 10:48:29,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:48:51] 2025-06-04 10:48:32,170 | INFO     | monitor loop #294: job 0:6678313618 is in state 'finished'
[2025-06-04 06:48:51] 2025-06-04 10:48:32,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:48:51] 2025-06-04 10:48:32,965 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 06:48:51] 2025-06-04 10:48:32,966 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678313618/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:48:51] 2025-06-04 10:48:32,967 | INFO     | extracted standard info from prmon json
[2025-06-04 06:48:51] 2025-06-04 10:48:32,967 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:48:51] 2025-06-04 10:48:32,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:48:51] 2025-06-04 10:48:32,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:48:51] 2025-06-04 10:48:32,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:48:51] 2025-06-04 10:48:32,969 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:48:51] 2025-06-04 10:48:32,969 | INFO     | sum of square deviations: 57407588.0
[2025-06-04 06:48:51] 2025-06-04 10:48:32,969 | INFO     | sum of deviations: -5991860542.0
[2025-06-04 06:48:51] 2025-06-04 10:48:32,969 | INFO     | mean x: 1749032231.0
[2025-06-04 06:48:51] 2025-06-04 10:48:32,969 | INFO     | mean y: 2783352.50877193
[2025-06-04 06:48:51] 2025-06-04 10:48:32,969 | INFO     | -- intersect: 182556302438.08905
[2025-06-04 06:48:51] 2025-06-04 10:48:32,970 | INFO     | intersect: 182556302438.08905
[2025-06-04 06:48:51] 2025-06-04 10:48:32,970 | INFO     | chi2: 0.05389446932913178
[2025-06-04 06:48:51] 2025-06-04 10:48:32,970 | INFO     | -- intersect: 182556302438.08905
[2025-06-04 06:48:51] 2025-06-04 10:48:32,970 | INFO     | current memory leak: -104.37 B/s (using 57 data points, chi2=0.05)
[2025-06-04 06:48:51] 2025-06-04 10:48:32,970 | INFO     | ..............................
[2025-06-04 06:48:51] 2025-06-04 10:48:32,970 | INFO     | . Timing measurements:
[2025-06-04 06:48:51] 2025-06-04 10:48:32,971 | INFO     | . get job = 0 s
[2025-06-04 06:48:51] 2025-06-04 10:48:32,971 | INFO     | . initial setup = 2 s
[2025-06-04 06:48:51] 2025-06-04 10:48:32,971 | INFO     | . payload setup = 9 s
[2025-06-04 06:48:51] 2025-06-04 10:48:32,971 | INFO     | . stage-in = 0 s
[2025-06-04 06:48:51] 2025-06-04 10:48:32,971 | INFO     | . payload execution = 3889 s
[2025-06-04 06:48:51] 2025-06-04 10:48:32,971 | INFO     | . stage-out = 0 s
[2025-06-04 06:48:51] 2025-06-04 10:48:32,971 | INFO     | . log creation = 0 s
[2025-06-04 06:48:51] 2025-06-04 10:48:32,971 | INFO     | ..............................
[2025-06-04 06:48:51] 2025-06-04 10:48:33,055 | INFO     | 
[2025-06-04 06:48:51] 2025-06-04 10:48:33,055 | INFO     | job summary report
[2025-06-04 06:48:51] 2025-06-04 10:48:33,055 | INFO     | --------------------------------------------------
[2025-06-04 06:48:51] 2025-06-04 10:48:33,055 | INFO     | PanDA job id: 6678313618
[2025-06-04 06:48:51] 2025-06-04 10:48:33,055 | INFO     | task id: 45006595
[2025-06-04 06:48:51] 2025-06-04 10:48:33,056 | INFO     | errors: (none)
[2025-06-04 06:48:51] 2025-06-04 10:48:33,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:48:51] 2025-06-04 10:48:33,056 | INFO     | pilot state: finished 
[2025-06-04 06:48:51] 2025-06-04 10:48:33,056 | INFO     | transexitcode: 0
[2025-06-04 06:48:51] 2025-06-04 10:48:33,056 | INFO     | exeerrorcode: 0
[2025-06-04 06:48:51] 2025-06-04 10:48:33,056 | INFO     | exeerrordiag: 
[2025-06-04 06:48:51] 2025-06-04 10:48:33,057 | INFO     | exitcode: 0
[2025-06-04 06:48:51] 2025-06-04 10:48:33,057 | INFO     | exitmsg: OK
[2025-06-04 06:48:51] 2025-06-04 10:48:33,057 | INFO     | cpuconsumptiontime: 41457 s
[2025-06-04 06:48:51] 2025-06-04 10:48:33,057 | INFO     | nevents: 400
[2025-06-04 06:48:51] 2025-06-04 10:48:33,057 | INFO     | neventsw: 0
[2025-06-04 06:48:51] 2025-06-04 10:48:33,057 | INFO     | pid: 17164
[2025-06-04 06:48:51] 2025-06-04 10:48:33,057 | INFO     | pgrp: 17164
[2025-06-04 06:48:51] 2025-06-04 10:48:33,058 | INFO     | corecount: 12
[2025-06-04 06:48:51] 2025-06-04 10:48:33,058 | INFO     | event service: False
[2025-06-04 06:48:51] 2025-06-04 10:48:33,058 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 12: 2405446, 3903: 2431125, 3904: 2440066, 3905: 2440250, 3910: 2440420}
[2025-06-04 06:48:51] 2025-06-04 10:48:33,058 | INFO     | --------------------------------------------------
[2025-06-04 06:48:51] 2025-06-04 10:48:33,058 | INFO     | 
[2025-06-04 06:48:51] 2025-06-04 10:48:33,058 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 06:48:51] 2025-06-04 10:48:33,083 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,083 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,083 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,084 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,086 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:48:51] 2025-06-04 10:48:33,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:48:51] 2025-06-04 10:48:33,087 | INFO     | job 6678313618 has completed (purged errors)
[2025-06-04 06:48:51] 2025-06-04 10:48:33,087 | INFO     | overall cleanup function is called
[2025-06-04 06:48:51] 2025-06-04 10:48:34,094 | INFO     | --- collectZombieJob: --- 10, [17164]
[2025-06-04 06:48:51] 2025-06-04 10:48:34,094 | INFO     | zombie collector waiting for pid 17164
[2025-06-04 06:48:51] 2025-06-04 10:48:34,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:48:51] 2025-06-04 10:48:34,095 | INFO     | collected zombie processes
[2025-06-04 06:48:51] 2025-06-04 10:48:34,095 | INFO     | will attempt to kill all subprocesses of pid=17164
[2025-06-04 06:48:51] 2025-06-04 10:48:34,186 | INFO     | process IDs to be killed: [17164] (in reverse order)
[2025-06-04 06:48:51] 2025-06-04 10:48:34,239 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:48:51] 2025-06-04 10:48:34,240 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:48:51] 2025-06-04 10:48:34,243 | INFO     | did not find any defunct processes belonging to 17164
[2025-06-04 06:48:51] 2025-06-04 10:48:34,247 | INFO     | did not find any defunct processes belonging to 17164
[2025-06-04 06:48:51] 2025-06-04 10:48:34,247 | INFO     | ready for new job
[2025-06-04 06:48:51] 2025-06-04 10:48:34,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:48:51] 2025-06-04 10:48:34,248 | INFO     | **************************************
[2025-06-04 06:48:51] 2025-06-04 10:48:34,248 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:48:51] 2025-06-04 10:48:34,248 | INFO     | **************************************
[2025-06-04 06:48:51] 2025-06-04 10:48:34,248 | INFO     | 
[2025-06-04 06:48:51] 2025-06-04 10:48:34,249 | INFO     | architecture information:
[2025-06-04 06:48:51] 2025-06-04 10:48:34,249 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:48:51] 2025-06-04 10:48:34,264 | INFO     | cat /etc/os-release:
[2025-06-04 06:48:51] NAME="CentOS Linux"
[2025-06-04 06:48:51] VERSION="7 (Core)"
[2025-06-04 06:48:51] ID="centos"
[2025-06-04 06:48:51] ID_LIKE="rhel fedora"
[2025-06-04 06:48:51] VERSION_ID="7"
[2025-06-04 06:48:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:48:51] ANSI_COLOR="0;31"
[2025-06-04 06:48:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:48:51] HOME_URL="https://www.centos.org/"
[2025-06-04 06:48:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:48:51] 
[2025-06-04 06:48:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:48:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:48:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:48:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:48:51] 
[2025-06-04 06:48:51] 2025-06-04 10:48:34,264 | INFO     | **************************************
[2025-06-04 06:48:51] 2025-06-04 10:48:34,767 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 06:48:51] 2025-06-04 10:48:34,783 | INFO     | sufficient remaining disk space (29420945408 B)
[2025-06-04 06:48:51] 2025-06-04 10:48:34,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:48:51] 2025-06-04 10:48:34,784 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:48:51] 2025-06-04 10:48:34,784 | INFO     | update_server=False
[2025-06-04 06:48:51] 2025-06-04 10:48:34,784 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:48:51] 2025-06-04 10:48:34,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:48:51] 2025-06-04 10:48:34,785 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:48:51] 2025-06-04 10:48:34,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:48:51] 2025-06-04 10:48:34,810 | INFO     | all data control threads have been joined
[2025-06-04 06:48:51] 2025-06-04 10:48:35,068 | INFO     | all job control threads have been joined
[2025-06-04 06:48:51] 2025-06-04 10:48:35,122 | INFO     | all payload control threads have been joined
[2025-06-04 06:48:51] 2025-06-04 10:48:35,342 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:48:51] 2025-06-04 10:48:35,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:48:51] 2025-06-04 10:48:35,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:48:51] 2025-06-04 10:48:35,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:48:51] 2025-06-04 10:48:35,679 | INFO     | aborting loop
[2025-06-04 06:48:51] 2025-06-04 10:48:35,787 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:35,789 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:35,816 | INFO     | [data] control thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:35,997 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:36,074 | INFO     | [job] control thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:36,127 | INFO     | [payload] control thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:36,463 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:36,495 | INFO     | [job] validate thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:36,680 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:36,791 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:36,818 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:37,045 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:37,213 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:37,280 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:38,790 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:45,190 | INFO     | job.realtimelogging is not enabled
[2025-06-04 06:48:51] 2025-06-04 10:48:46,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:48:51] 2025-06-04 10:48:46,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140106646894400)>', '<ExcThread(monitor, started 140105977157376)>']
[2025-06-04 06:48:51] 2025-06-04 10:48:47,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:48:51] 2025-06-04 10:48:47,404 | INFO     | [monitor] control thread has ended
[2025-06-04 06:48:51] 2025-06-04 10:48:51,452 | INFO     | all workflow threads have been joined
[2025-06-04 06:48:51] 2025-06-04 10:48:51,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:48:51] 2025-06-04 10:48:51,452 | INFO     | traces error code: 0
[2025-06-04 06:48:51] 2025-06-04 10:48:51,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:48:51] 2025-06-04 10:48:51,543 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:48:51] 2025-06-04 10:48:51,547 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:48:51] 2025-06-04 10:48:51,551 [wrapper] pilotpid: 10760
[2025-06-04 06:48:51] 2025-06-04 10:48:51,554 [wrapper] Pilot exit status: 0
[2025-06-04 06:48:51] 2025-06-04 10:48:51,572 [wrapper] pandaids: 6678313618
[2025-06-04 06:48:51] 2025-06-04 10:48:51,611 [wrapper] cleanup supervisor_pilot 10608 10761
[2025-06-04 06:48:51] 2025-06-04 10:48:51,615 [wrapper] Test setup, not cleaning
[2025-06-04 06:48:51] 2025-06-04 10:48:51,619 [wrapper] apfmon messages muted
[2025-06-04 06:48:51] 2025-06-04 10:48:51,623 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:48:51] 2025-06-04 10:48:51,627 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:48:51]  *** Error codes and diagnostics ***
[2025-06-04 06:48:51]     "exeErrorCode": 0,
[2025-06-04 06:48:51]     "exeErrorDiag": "",
[2025-06-04 06:48:51]     "pilotErrorCode": 0,
[2025-06-04 06:48:51]     "pilotErrorDiag": "",
[2025-06-04 06:48:51]  *** Listing of results directory ***
[2025-06-04 06:48:51] total 389704
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:29 queuedata.json
[2025-06-04 06:48:51] -rwx------ 1 boincer umatlas     37140 Jun  4 00:29 runpilot2-wrapper.sh
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas       100 Jun  4 05:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:48:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 05:42 run_atlas
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas       105 Jun  4 05:42 job.xml
[2025-06-04 06:48:51] -rw-r--r-- 2 boincer umatlas 216094353 Jun  4 05:42 EVNT.45006593._002106.pool.root.1
[2025-06-04 06:48:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:42 start_atlas.sh
[2025-06-04 06:48:51] drwxrwx--x 2 boincer umatlas      4096 Jun  4 05:42 shared
[2025-06-04 06:48:51] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 05:42 input.tar.gz
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas         0 Jun  4 05:42 boinc_lockfile
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 05:42 pandaJob.out
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas    986766 Jun  4 05:43 agis_schedconf.cvmfs.json
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas   1603667 Jun  4 05:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:48:51] drwx------ 4 boincer umatlas      4096 Jun  4 05:43 pilot3
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 06:46 init_data.xml
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas 177629357 Jun  4 06:47 HITS.45006595._052598.pool.root.1
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas        95 Jun  4 06:47 pilot_heartbeat.json
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas       529 Jun  4 06:47 boinc_task_state.xml
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas      1048 Jun  4 06:48 memory_monitor_summary.json
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas    366649 Jun  4 06:48 log.45006595._052598.job.log.tgz.1
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas      7753 Jun  4 06:48 heartbeat.json
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 06:48 boinc_mmap_file
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas        27 Jun  4 06:48 wrapper_checkpoint.txt
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas      4425 Jun  4 06:48 pilotlog.txt
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas    382439 Jun  4 06:48 log.45006595._052598.job.log.1
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas       357 Jun  4 06:48 output.list
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas       620 Jun  4 06:48 runtime_log
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas    768000 Jun  4 06:48 result.tar.gz
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 06:48 runtime_log.err
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas       658 Jun  4 06:48 KcWKDm2vug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfFnKDm1wg5Om.diag
[2025-06-04 06:48:51] -rw-r--r-- 1 boincer umatlas     21416 Jun  4 06:48 stderr.txt
[2025-06-04 06:48:51] HITS file was successfully produced:
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas 177629357 Jun  4 06:47 shared/HITS.pool.root.1
[2025-06-04 06:48:51]  *** Contents of shared directory: ***
[2025-06-04 06:48:51] total 385772
[2025-06-04 06:48:51] -rw-r--r-- 2 boincer umatlas 216094353 Jun  4 05:42 ATLAS.root_0
[2025-06-04 06:48:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:42 start_atlas.sh
[2025-06-04 06:48:51] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 05:42 input.tar.gz
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas 177629357 Jun  4 06:47 HITS.pool.root.1
[2025-06-04 06:48:51] -rw------- 1 boincer umatlas    768000 Jun  4 06:48 result.tar.gz
06:48:53 (7125): run_atlas exited; CPU time 41438.270123
06:48:53 (7125): called boinc_finish(0)

</stderr_txt>
]]>

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