Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:30:57 (14660): wrapper (7.7.26015): starting
05:30:57 (14660): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:30:57] Arguments: --nthreads 8
[2025-06-04 05:30:57] Threads: 8
[2025-06-04 05:30:57] Checking for CVMFS
[2025-06-04 05:30:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:30:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:30:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:30:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:30:57] 2.11.2.0 2820 35457 97592 146775 0 55 13959188 20275200 1 130560 0 12139885 99.955 7156792 8179 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 05:30:57] CVMFS is ok
[2025-06-04 05:30:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:30:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:30:57] Further information can be found at the LHC@home message board.
[2025-06-04 05:30:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:30:57] Checking for apptainer binary...
[2025-06-04 05:30:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:30:57] Running /usr/bin/apptainer --version
[2025-06-04 05:30:57] apptainer version 1.3.2-1.el7
[2025-06-04 05:30:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:30:59] c-204-25.aglt2.org
[2025-06-04 05:30:59] apptainer works
[2025-06-04 05:30:59] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:30:59] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:30:59] Starting ATLAS job with PandaID=6678312744
[2025-06-04 05:30:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:23:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:23:03] 2025-06-04 11:22:44,401 | INFO     | executing command: lscpu
[2025-06-04 07:23:03] 2025-06-04 11:22:44,435 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:23:03] 2025-06-04 11:22:45,530 | INFO     | monitor loop #497: job 0:6678312744 is in state 'finished'
[2025-06-04 07:23:03] 2025-06-04 11:22:45,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:23:03] 2025-06-04 11:22:48,033 | INFO     | monitor loop #498: job 0:6678312744 is in state 'finished'
[2025-06-04 07:23:03] 2025-06-04 11:22:48,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:23:03] 2025-06-04 11:22:50,183 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 07:23:03] 2025-06-04 11:22:50,184 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678312744/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:23:03] 2025-06-04 11:22:50,190 | INFO     | extracted standard info from prmon json
[2025-06-04 07:23:03] 2025-06-04 11:22:50,190 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:23:03] 2025-06-04 11:22:50,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:23:03] 2025-06-04 11:22:50,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:23:03] 2025-06-04 11:22:50,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:23:03] 2025-06-04 11:22:50,195 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:23:03] 2025-06-04 11:22:50,196 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,196 | INFO     | sum of deviations: -1980650174.9999993
[2025-06-04 07:23:03] 2025-06-04 11:22:50,197 | INFO     | mean x: 1749032803.0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,197 | INFO     | mean y: 2551867.146788991
[2025-06-04 07:23:03] 2025-06-04 11:22:50,197 | INFO     | -- intersect: 8630039964.809992
[2025-06-04 07:23:03] 2025-06-04 11:22:50,197 | INFO     | intersect: 8630039964.809992
[2025-06-04 07:23:03] 2025-06-04 11:22:50,197 | INFO     | chi2: 1.7001755255420026
[2025-06-04 07:23:03] 2025-06-04 11:22:50,198 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,198 | INFO     | sum of deviations: -1287865855.000002
[2025-06-04 07:23:03] 2025-06-04 11:22:50,198 | INFO     | mean x: 1749032650.5
[2025-06-04 07:23:03] 2025-06-04 11:22:50,198 | INFO     | mean y: 2553870.923076923
[2025-06-04 07:23:03] 2025-06-04 11:22:50,199 | INFO     | -- intersect: 6461032974.745371
[2025-06-04 07:23:03] 2025-06-04 11:22:50,199 | INFO     | intersect: 6461032974.745371
[2025-06-04 07:23:03] 2025-06-04 11:22:50,199 | INFO     | chi2: 1.7025481161952043
[2025-06-04 07:23:03] 2025-06-04 11:22:50,199 | INFO     | current chi2=1.7025481161952043 (change=-0.13954974751476673 %)
[2025-06-04 07:23:03] 2025-06-04 11:22:50,199 | INFO     | right removable region: 103
[2025-06-04 07:23:03] 2025-06-04 11:22:50,200 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,200 | INFO     | sum of deviations: -19141206866.5
[2025-06-04 07:23:03] 2025-06-04 11:22:50,200 | INFO     | mean x: 1749032955.5
[2025-06-04 07:23:03] 2025-06-04 11:22:50,200 | INFO     | mean y: 2600453.028846154
[2025-06-04 07:23:03] 2025-06-04 11:22:50,201 | INFO     | -- intersect: 95993270325.15144
[2025-06-04 07:23:03] 2025-06-04 11:22:50,201 | INFO     | intersect: 95993270325.15144
[2025-06-04 07:23:03] 2025-06-04 11:22:50,201 | INFO     | chi2: 0.11965066724024388
[2025-06-04 07:23:03] 2025-06-04 11:22:50,201 | INFO     | current chi2=0.11965066724024388 (change=92.96245208552214 %)
[2025-06-04 07:23:03] 2025-06-04 11:22:50,201 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,202 | INFO     | sum of deviations: -18455272083.999992
[2025-06-04 07:23:03] 2025-06-04 11:22:50,202 | INFO     | mean x: 1749033108.0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,202 | INFO     | mean y: 2598123.8484848486
[2025-06-04 07:23:03] 2025-06-04 11:22:50,202 | INFO     | -- intersect: 107297426277.69739
[2025-06-04 07:23:03] 2025-06-04 11:22:50,202 | INFO     | intersect: 107297426277.69739
[2025-06-04 07:23:03] 2025-06-04 11:22:50,203 | INFO     | chi2: 0.0983001860345409
[2025-06-04 07:23:03] 2025-06-04 11:22:50,203 | INFO     | current chi2=0.0983001860345409 (change=17.844013492071745 %)
[2025-06-04 07:23:03] 2025-06-04 11:22:50,203 | INFO     | left removable region: 20
[2025-06-04 07:23:03] 2025-06-04 11:22:50,203 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,204 | INFO     | sum of deviations: -12162157491.000002
[2025-06-04 07:23:03] 2025-06-04 11:22:50,204 | INFO     | mean x: 1749033230.0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,204 | INFO     | mean y: 2583729.9036144577
[2025-06-04 07:23:03] 2025-06-04 11:22:50,204 | INFO     | -- intersect: 119996445050.82729
[2025-06-04 07:23:03] 2025-06-04 11:22:50,204 | INFO     | intersect: 119996445050.82729
[2025-06-04 07:23:03] 2025-06-04 11:22:50,204 | INFO     | chi2: 0.08888734850910668
[2025-06-04 07:23:03] 2025-06-04 11:22:50,204 | INFO     | -- intersect: 119996445050.82729
[2025-06-04 07:23:03] 2025-06-04 11:22:50,205 | INFO     | current memory leak: -68.61 B/s (using 83 data points, chi2=0.09)
[2025-06-04 07:23:03] 2025-06-04 11:22:50,205 | INFO     | ..............................
[2025-06-04 07:23:03] 2025-06-04 11:22:50,205 | INFO     | . Timing measurements:
[2025-06-04 07:23:03] 2025-06-04 11:22:50,205 | INFO     | . get job = 0 s
[2025-06-04 07:23:03] 2025-06-04 11:22:50,205 | INFO     | . initial setup = 3 s
[2025-06-04 07:23:03] 2025-06-04 11:22:50,206 | INFO     | . payload setup = 11 s
[2025-06-04 07:23:03] 2025-06-04 11:22:50,206 | INFO     | . stage-in = 0 s
[2025-06-04 07:23:03] 2025-06-04 11:22:50,206 | INFO     | . payload execution = 6651 s
[2025-06-04 07:23:03] 2025-06-04 11:22:50,206 | INFO     | . stage-out = 0 s
[2025-06-04 07:23:03] 2025-06-04 11:22:50,206 | INFO     | . log creation = 0 s
[2025-06-04 07:23:03] 2025-06-04 11:22:50,206 | INFO     | ..............................
[2025-06-04 07:23:03] 2025-06-04 11:22:50,310 | INFO     | 
[2025-06-04 07:23:03] 2025-06-04 11:22:50,310 | INFO     | job summary report
[2025-06-04 07:23:03] 2025-06-04 11:22:50,310 | INFO     | --------------------------------------------------
[2025-06-04 07:23:03] 2025-06-04 11:22:50,311 | INFO     | PanDA job id: 6678312744
[2025-06-04 07:23:03] 2025-06-04 11:22:50,311 | INFO     | task id: 45006595
[2025-06-04 07:23:03] 2025-06-04 11:22:50,311 | INFO     | errors: (none)
[2025-06-04 07:23:03] 2025-06-04 11:22:50,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:23:03] 2025-06-04 11:22:50,311 | INFO     | pilot state: finished 
[2025-06-04 07:23:03] 2025-06-04 11:22:50,312 | INFO     | transexitcode: 0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,312 | INFO     | exeerrorcode: 0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,312 | INFO     | exeerrordiag: 
[2025-06-04 07:23:03] 2025-06-04 11:22:50,312 | INFO     | exitcode: 0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,312 | INFO     | exitmsg: OK
[2025-06-04 07:23:03] 2025-06-04 11:22:50,312 | INFO     | cpuconsumptiontime: 49224 s
[2025-06-04 07:23:03] 2025-06-04 11:22:50,313 | INFO     | nevents: 400
[2025-06-04 07:23:03] 2025-06-04 11:22:50,313 | INFO     | neventsw: 0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,313 | INFO     | pid: 24790
[2025-06-04 07:23:03] 2025-06-04 11:22:50,313 | INFO     | pgrp: 24790
[2025-06-04 07:23:03] 2025-06-04 11:22:50,313 | INFO     | corecount: 8
[2025-06-04 07:23:03] 2025-06-04 11:22:50,313 | INFO     | event service: False
[2025-06-04 07:23:03] 2025-06-04 11:22:50,314 | INFO     | sizes: {0: 2404957, 1: 2405212, 7: 2405418, 12: 2405446, 6667: 2432371, 6669: 2441312, 6670: 2441496, 6678: 2441666}
[2025-06-04 07:23:03] 2025-06-04 11:22:50,314 | INFO     | --------------------------------------------------
[2025-06-04 07:23:03] 2025-06-04 11:22:50,314 | INFO     | 
[2025-06-04 07:23:03] 2025-06-04 11:22:50,314 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 07:23:03] 2025-06-04 11:22:50,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,345 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,345 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:23:03] 2025-06-04 11:22:50,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,348 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:23:03] 2025-06-04 11:22:50,348 | INFO     | job 6678312744 has completed (purged errors)
[2025-06-04 07:23:03] 2025-06-04 11:22:50,348 | INFO     | overall cleanup function is called
[2025-06-04 07:23:03] 2025-06-04 11:22:51,176 | INFO     | PID=18363 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 07:23:03] 2025-06-04 11:22:51,356 | INFO     | --- collectZombieJob: --- 10, [24790]
[2025-06-04 07:23:03] 2025-06-04 11:22:51,357 | INFO     | zombie collector waiting for pid 24790
[2025-06-04 07:23:03] 2025-06-04 11:22:51,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:23:03] 2025-06-04 11:22:51,357 | INFO     | collected zombie processes
[2025-06-04 07:23:03] 2025-06-04 11:22:51,357 | INFO     | will attempt to kill all subprocesses of pid=24790
[2025-06-04 07:23:03] 2025-06-04 11:22:51,445 | INFO     | process IDs to be killed: [24790] (in reverse order)
[2025-06-04 07:23:03] 2025-06-04 11:22:51,502 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:23:03] 2025-06-04 11:22:51,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:23:03] 2025-06-04 11:22:51,506 | INFO     | did not find any defunct processes belonging to 24790
[2025-06-04 07:23:03] 2025-06-04 11:22:51,510 | INFO     | did not find any defunct processes belonging to 24790
[2025-06-04 07:23:03] 2025-06-04 11:22:51,510 | INFO     | ready for new job
[2025-06-04 07:23:03] 2025-06-04 11:22:51,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:23:03] 2025-06-04 11:22:51,512 | INFO     | **************************************
[2025-06-04 07:23:03] 2025-06-04 11:22:51,512 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:23:03] 2025-06-04 11:22:51,512 | INFO     | **************************************
[2025-06-04 07:23:03] 2025-06-04 11:22:51,512 | INFO     | 
[2025-06-04 07:23:03] 2025-06-04 11:22:51,513 | INFO     | architecture information:
[2025-06-04 07:23:03] 2025-06-04 11:22:51,513 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:23:03] 2025-06-04 11:22:51,531 | INFO     | cat /etc/os-release:
[2025-06-04 07:23:03] NAME="CentOS Linux"
[2025-06-04 07:23:03] VERSION="7 (Core)"
[2025-06-04 07:23:03] ID="centos"
[2025-06-04 07:23:03] ID_LIKE="rhel fedora"
[2025-06-04 07:23:03] VERSION_ID="7"
[2025-06-04 07:23:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:23:03] ANSI_COLOR="0;31"
[2025-06-04 07:23:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:23:03] HOME_URL="https://www.centos.org/"
[2025-06-04 07:23:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:23:03] 
[2025-06-04 07:23:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:23:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:23:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:23:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:23:03] 
[2025-06-04 07:23:03] 2025-06-04 11:22:51,532 | INFO     | **************************************
[2025-06-04 07:23:03] 2025-06-04 11:22:52,034 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 07:23:03] 2025-06-04 11:22:52,055 | INFO     | sufficient remaining disk space (18609078272 B)
[2025-06-04 07:23:03] 2025-06-04 11:22:52,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:23:03] 2025-06-04 11:22:52,056 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:23:03] 2025-06-04 11:22:52,056 | INFO     | update_server=False
[2025-06-04 07:23:03] 2025-06-04 11:22:52,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:23:03] 2025-06-04 11:22:52,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:23:03] 2025-06-04 11:22:52,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:23:03] 2025-06-04 11:22:52,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:23:03] 2025-06-04 11:22:52,058 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:23:03] 2025-06-04 11:22:52,058 | INFO     | aborting loop
[2025-06-04 07:23:03] 2025-06-04 11:22:52,059 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:23:03] 2025-06-04 11:22:52,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:23:03] 2025-06-04 11:22:52,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:23:03] 2025-06-04 11:22:52,301 | INFO     | all data control threads have been joined
[2025-06-04 07:23:03] 2025-06-04 11:22:52,566 | INFO     | all payload control threads have been joined
[2025-06-04 07:23:03] 2025-06-04 11:22:52,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:23:03] 2025-06-04 11:22:53,059 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:53,061 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:53,064 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:53,100 | INFO     | all job control threads have been joined
[2025-06-04 07:23:03] 2025-06-04 11:22:53,307 | INFO     | [data] control thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:53,541 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:53,571 | INFO     | [payload] control thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:53,601 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:53,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:53,604 | INFO     | [job] validate thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:53,710 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:53,923 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:54,065 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:54,106 | INFO     | [job] control thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:54,166 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:54,541 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:56,732 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:23:03] 2025-06-04 11:22:58,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182878906176)>', '<ExcThread(monitor, started 140182053431040)>']
[2025-06-04 07:23:03] 2025-06-04 11:22:59,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:23:03] 2025-06-04 11:22:59,091 | INFO     | [monitor] control thread has ended
[2025-06-04 07:23:03] 2025-06-04 11:23:03,239 | INFO     | all workflow threads have been joined
[2025-06-04 07:23:03] 2025-06-04 11:23:03,240 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:23:03] 2025-06-04 11:23:03,240 | INFO     | traces error code: 0
[2025-06-04 07:23:03] 2025-06-04 11:23:03,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:23:03] 2025-06-04 11:23:03,345 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:23:03] 2025-06-04 11:23:03,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:23:03] 2025-06-04 11:23:03,355 [wrapper] pilotpid: 18363
[2025-06-04 07:23:03] 2025-06-04 11:23:03,360 [wrapper] Pilot exit status: 0
[2025-06-04 07:23:03] 2025-06-04 11:23:03,379 [wrapper] pandaids: 6678312744
[2025-06-04 07:23:03] 2025-06-04 11:23:03,423 [wrapper] cleanup supervisor_pilot  7613 18364
[2025-06-04 07:23:03] 2025-06-04 11:23:03,429 [wrapper] Test setup, not cleaning
[2025-06-04 07:23:03] 2025-06-04 11:23:03,434 [wrapper] apfmon messages muted
[2025-06-04 07:23:03] 2025-06-04 11:23:03,438 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:23:03] 2025-06-04 11:23:03,443 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:23:03]  *** Error codes and diagnostics ***
[2025-06-04 07:23:03]     "exeErrorCode": 0,
[2025-06-04 07:23:03]     "exeErrorDiag": "",
[2025-06-04 07:23:03]     "pilotErrorCode": 0,
[2025-06-04 07:23:03]     "pilotErrorDiag": "",
[2025-06-04 07:23:03]  *** Listing of results directory ***
[2025-06-04 07:23:03] total 390536
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 07:23:03] -rwx------ 1 boincer umatlas     37140 Jun  4 00:15 runpilot2-wrapper.sh
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:15 queuedata.json
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas       100 Jun  4 05:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:23:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 05:30 run_atlas
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas       105 Jun  4 05:30 job.xml
[2025-06-04 07:23:03] -rw-r--r-- 2 boincer umatlas 215159456 Jun  4 05:30 EVNT.45006593._002090.pool.root.1
[2025-06-04 07:23:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:30 start_atlas.sh
[2025-06-04 07:23:03] drwxrwx--x 2 boincer umatlas      4096 Jun  4 05:30 shared
[2025-06-04 07:23:03] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 05:30 input.tar.gz
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas         0 Jun  4 05:30 boinc_lockfile
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 05:30 pandaJob.out
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas    986766 Jun  4 05:31 agis_schedconf.cvmfs.json
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas   1603667 Jun  4 05:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:23:03] drwx------ 4 boincer umatlas      4096 Jun  4 05:31 pilot3
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas 179040415 Jun  4 07:22 HITS.45006595._052190.pool.root.1
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas      5904 Jun  4 07:22 init_data.xml
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas       529 Jun  4 07:22 boinc_task_state.xml
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 07:22 boinc_mmap_file
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas        27 Jun  4 07:22 wrapper_checkpoint.txt
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas      1063 Jun  4 07:22 memory_monitor_summary.json
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas    320783 Jun  4 07:22 log.45006595._052190.job.log.tgz.1
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas        95 Jun  4 07:22 pilot_heartbeat.json
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas      7753 Jun  4 07:22 heartbeat.json
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas      4476 Jun  4 07:23 pilotlog.txt
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas    616407 Jun  4 07:23 log.45006595._052190.job.log.1
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas       357 Jun  4 07:23 output.list
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas       620 Jun  4 07:23 runtime_log
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas    952320 Jun  4 07:23 result.tar.gz
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas       659 Jun  4 07:23 t9FNDmgiug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmy9mKDm0koism.diag
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 07:23 runtime_log.err
[2025-06-04 07:23:03] -rw-r--r-- 1 boincer umatlas     21231 Jun  4 07:23 stderr.txt
[2025-06-04 07:23:03] HITS file was successfully produced:
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas 179040415 Jun  4 07:22 shared/HITS.pool.root.1
[2025-06-04 07:23:03]  *** Contents of shared directory: ***
[2025-06-04 07:23:03] total 386420
[2025-06-04 07:23:03] -rw-r--r-- 2 boincer umatlas 215159456 Jun  4 05:30 ATLAS.root_0
[2025-06-04 07:23:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 05:30 start_atlas.sh
[2025-06-04 07:23:03] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 05:30 input.tar.gz
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas 179040415 Jun  4 07:22 HITS.pool.root.1
[2025-06-04 07:23:03] -rw------- 1 boincer umatlas    952320 Jun  4 07:23 result.tar.gz
07:23:05 (14660): run_atlas exited; CPU time 49173.037611
07:23:05 (14660): called boinc_finish(0)

</stderr_txt>
]]>

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