Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
17:58:18 (422544): wrapper (7.7.26015): starting
17:58:18 (422544): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 17:58:18] Arguments: --nthreads 12
[2025-06-04 17:58:18] Threads: 12
[2025-06-04 17:58:18] Checking for CVMFS
[2025-06-04 17:58:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:58:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:58:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:58:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:58:19] 2.13.0.0 3386825 3112 48960 146797 1 56 3736068 6144001 0 130560 0 1708954 99.993 440168 2723 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 17:58:19] CVMFS is ok
[2025-06-04 17:58:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:58:19] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 17:58:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 17:58:19] Further information can be found at the LHC@home message board.
[2025-06-04 17:58:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:58:19] Checking for apptainer binary...
[2025-06-04 17:58:19] apptainer is not installed, using version from CVMFS
[2025-06-04 17:58:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:58:19] ace
[2025-06-04 17:58:19] apptainer works
[2025-06-04 17:58:19] Set ATHENA_PROC_NUMBER=12
[2025-06-04 17:58:19] Set ATHENA_CORE_NUMBER=12
[2025-06-04 17:58:19] Starting ATLAS job with PandaID=6678313564
[2025-06-04 17:58:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:03:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:03:13]  guid=9253b30a-93c7-4762-a254-70d32cafd29b
[2025-06-04 19:03:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 19:03:13]  is_altstaged=None
[2025-06-04 19:03:13]  is_tar=False
[2025-06-04 19:03:13]  lfn=log.45006595._052544.job.log.tgz.1
[2025-06-04 19:03:13]  mtime=0
[2025-06-04 19:03:13]  protocol_id=None
[2025-06-04 19:03:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 19:03:13]  replicas=None
[2025-06-04 19:03:13]  scope=mc23_13p6TeV
[2025-06-04 19:03:13]  status=None
[2025-06-04 19:03:13]  status_code=0
[2025-06-04 19:03:13]  storage_token=
[2025-06-04 19:03:13]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6678313564/log.45006595._052544.job.log.tgz.1
[2025-06-04 19:03:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/f5/log.45006595._052544.job.log.tgz.1
[2025-06-04 19:03:13]  workdir=None
[2025-06-04 19:03:13] ]
[2025-06-04 19:03:13] 2025-06-05 00:02:53,884 | INFO     | transferring file log.45006595._052544.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6678313564/log.45006595._052544.job.log.tgz.1 to /var/lib/boinc
[2025-06-04 19:03:13] 2025-06-05 00:02:53,884 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6678313564/log.45006595._052544.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-04 19:03:13] 2025-06-05 00:02:53,900 | INFO     | adding to output.list: log.45006595._052544.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/f5/log.45006595._052544.job.log.tg
[2025-06-04 19:03:13] 2025-06-05 00:02:53,901 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 19:03:13] 2025-06-05 00:02:53,901 | INFO     | summary of transferred files:
[2025-06-04 19:03:13] 2025-06-05 00:02:53,901 | INFO     |  -- lfn=log.45006595._052544.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 19:03:13] 2025-06-05 00:02:53,901 | INFO     | stage-out finished correctly
[2025-06-04 19:03:13] 2025-06-05 00:02:54,128 | INFO     | monitor loop #290: job 0:6678313564 is in state 'finished'
[2025-06-04 19:03:13] 2025-06-05 00:02:54,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:03:13] 2025-06-05 00:02:56,629 | INFO     | monitor loop #291: job 0:6678313564 is in state 'finished'
[2025-06-04 19:03:13] 2025-06-05 00:02:56,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:03:13] 2025-06-05 00:02:57,080 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 19:03:13] 2025-06-05 00:02:57,507 | INFO     | job 6678313564 has state=finished
[2025-06-04 19:03:13] 2025-06-05 00:02:57,507 | INFO     | preparing for final server update for job 6678313564 in state='finished'
[2025-06-04 19:03:13] 2025-06-05 00:02:57,507 | INFO     | this job has now completed (state=finished)
[2025-06-04 19:03:13] 2025-06-05 00:02:57,507 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 19:03:13] 2025-06-05 00:02:57,507 | INFO     | log transfer has been attempted: DONE
[2025-06-04 19:03:13] 2025-06-05 00:02:57,507 | INFO     | job 6678313564 has finished - writing final server update
[2025-06-04 19:03:13] 2025-06-05 00:02:57,508 | INFO     | total number of processed events: 400 (read)
[2025-06-04 19:03:13] 2025-06-05 00:02:57,513 | INFO     | executing command: lscpu
[2025-06-04 19:03:13] 2025-06-05 00:02:57,537 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 19:03:13] 2025-06-05 00:02:59,132 | INFO     | monitor loop #292: job 0:6678313564 is in state 'finished'
[2025-06-04 19:03:13] 2025-06-05 00:02:59,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:03:13] 2025-06-05 00:02:59,947 | INFO     | PID=426240 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 19:03:13] 2025-06-05 00:03:00,222 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 19:03:13] 2025-06-05 00:03:00,222 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678313564/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:03:13] 2025-06-05 00:03:00,223 | INFO     | extracted standard info from prmon json
[2025-06-04 19:03:13] 2025-06-05 00:03:00,223 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:03:13] 2025-06-05 00:03:00,223 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:03:13] 2025-06-05 00:03:00,224 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:03:13] 2025-06-05 00:03:00,224 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:03:13] 2025-06-05 00:03:00,226 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:03:13] 2025-06-05 00:03:00,226 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 19:03:13] 2025-06-05 00:03:00,226 | INFO     | sum of deviations: -7604248318.5
[2025-06-04 19:03:13] 2025-06-05 00:03:00,226 | INFO     | mean x: 1749079909.5
[2025-06-04 19:03:13] 2025-06-05 00:03:00,226 | INFO     | mean y: 2832165.9821428573
[2025-06-04 19:03:13] 2025-06-05 00:03:00,226 | INFO     | -- intersect: 244324478199.24786
[2025-06-04 19:03:13] 2025-06-05 00:03:00,226 | INFO     | intersect: 244324478199.24786
[2025-06-04 19:03:13] 2025-06-05 00:03:00,227 | INFO     | chi2: 0.09766763236788986
[2025-06-04 19:03:13] 2025-06-05 00:03:00,227 | INFO     | -- intersect: 244324478199.24786
[2025-06-04 19:03:13] 2025-06-05 00:03:00,227 | INFO     | current memory leak: -139.69 B/s (using 56 data points, chi2=0.10)
[2025-06-04 19:03:13] 2025-06-05 00:03:00,227 | INFO     | ..............................
[2025-06-04 19:03:13] 2025-06-05 00:03:00,227 | INFO     | . Timing measurements:
[2025-06-04 19:03:13] 2025-06-05 00:03:00,227 | INFO     | . get job = 0 s
[2025-06-04 19:03:13] 2025-06-05 00:03:00,228 | INFO     | . initial setup = 2 s
[2025-06-04 19:03:13] 2025-06-05 00:03:00,228 | INFO     | . payload setup = 3 s
[2025-06-04 19:03:13] 2025-06-05 00:03:00,228 | INFO     | . stage-in = 0 s
[2025-06-04 19:03:13] 2025-06-05 00:03:00,228 | INFO     | . payload execution = 3845 s
[2025-06-04 19:03:13] 2025-06-05 00:03:00,228 | INFO     | . stage-out = 0 s
[2025-06-04 19:03:13] 2025-06-05 00:03:00,228 | INFO     | . log creation = 0 s
[2025-06-04 19:03:13] 2025-06-05 00:03:00,228 | INFO     | ..............................
[2025-06-04 19:03:13] 2025-06-05 00:03:00,295 | INFO     | 
[2025-06-04 19:03:13] 2025-06-05 00:03:00,295 | INFO     | job summary report
[2025-06-04 19:03:13] 2025-06-05 00:03:00,295 | INFO     | --------------------------------------------------
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | PanDA job id: 6678313564
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | task id: 45006595
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | errors: (none)
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | pilot state: finished 
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | transexitcode: 0
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | exeerrorcode: 0
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | exeerrordiag: 
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | exitcode: 0
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | exitmsg: OK
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | cpuconsumptiontime: 42003 s
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | nevents: 400
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | neventsw: 0
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | pid: 432750
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | pgrp: 432750
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | corecount: 12
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | event service: False
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | sizes: {0: 2397178, 1: 2397377, 3: 2397583, 11: 2397611, 3852: 2423423, 3853: 2432378, 3856: 2432562, 3859: 2432732}
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | --------------------------------------------------
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | 
[2025-06-04 19:03:13] 2025-06-05 00:03:00,296 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-04 19:03:13] 2025-06-05 00:03:00,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,314 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,314 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,314 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | job 6678313564 has completed (purged errors)
[2025-06-04 19:03:13] 2025-06-05 00:03:00,315 | INFO     | overall cleanup function is called
[2025-06-04 19:03:13] 2025-06-05 00:03:01,322 | INFO     | --- collectZombieJob: --- 10, [432750]
[2025-06-04 19:03:13] 2025-06-05 00:03:01,322 | INFO     | zombie collector waiting for pid 432750
[2025-06-04 19:03:13] 2025-06-05 00:03:01,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:03:13] 2025-06-05 00:03:01,322 | INFO     | collected zombie processes
[2025-06-04 19:03:13] 2025-06-05 00:03:01,322 | INFO     | will attempt to kill all subprocesses of pid=432750
[2025-06-04 19:03:13] 2025-06-05 00:03:01,382 | INFO     | process IDs to be killed: [432750] (in reverse order)
[2025-06-04 19:03:13] 2025-06-05 00:03:01,412 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:03:13] 2025-06-05 00:03:01,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:03:13] 2025-06-05 00:03:01,414 | INFO     | did not find any defunct processes belonging to 432750
[2025-06-04 19:03:13] 2025-06-05 00:03:01,415 | INFO     | did not find any defunct processes belonging to 432750
[2025-06-04 19:03:13] 2025-06-05 00:03:01,415 | INFO     | ready for new job
[2025-06-04 19:03:13] 2025-06-05 00:03:01,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:03:13] 2025-06-05 00:03:01,416 | INFO     | **************************************
[2025-06-04 19:03:13] 2025-06-05 00:03:01,416 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:03:13] 2025-06-05 00:03:01,416 | INFO     | **************************************
[2025-06-04 19:03:13] 2025-06-05 00:03:01,416 | INFO     | 
[2025-06-04 19:03:13] 2025-06-05 00:03:01,417 | INFO     | architecture information:
[2025-06-04 19:03:13] 2025-06-05 00:03:01,417 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:03:13] 2025-06-05 00:03:01,427 | INFO     | cat /etc/os-release:
[2025-06-04 19:03:13] NAME="CentOS Linux"
[2025-06-04 19:03:13] VERSION="7 (Core)"
[2025-06-04 19:03:13] ID="centos"
[2025-06-04 19:03:13] ID_LIKE="rhel fedora"
[2025-06-04 19:03:13] VERSION_ID="7"
[2025-06-04 19:03:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:03:13] ANSI_COLOR="0;31"
[2025-06-04 19:03:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:03:13] HOME_URL="https://www.centos.org/"
[2025-06-04 19:03:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:03:13] 
[2025-06-04 19:03:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:03:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:03:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:03:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:03:13] 
[2025-06-04 19:03:13] 2025-06-05 00:03:01,427 | INFO     | **************************************
[2025-06-04 19:03:13] 2025-06-05 00:03:01,930 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-04 19:03:13] 2025-06-05 00:03:01,945 | INFO     | sufficient remaining disk space (24489492480 B)
[2025-06-04 19:03:13] 2025-06-05 00:03:01,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:03:13] 2025-06-05 00:03:01,946 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:03:13] 2025-06-05 00:03:01,946 | INFO     | update_server=False
[2025-06-04 19:03:13] 2025-06-05 00:03:01,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:03:13] 2025-06-05 00:03:01,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:03:13] 2025-06-05 00:03:01,953 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:03:13] 2025-06-05 00:03:01,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:03:13] 2025-06-05 00:03:01,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:03:13] 2025-06-05 00:03:01,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:03:13] 2025-06-05 00:03:02,477 | INFO     | all payload control threads have been joined
[2025-06-04 19:03:13] 2025-06-05 00:03:02,504 | INFO     | all data control threads have been joined
[2025-06-04 19:03:13] 2025-06-05 00:03:02,638 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:03:13] 2025-06-05 00:03:02,638 | INFO     | aborting loop
[2025-06-04 19:03:13] 2025-06-05 00:03:02,831 | INFO     | all job control threads have been joined
[2025-06-04 19:03:13] 2025-06-05 00:03:02,951 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:02,951 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:02,997 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:03,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:03:13] 2025-06-05 00:03:03,141 | INFO     | [job] validate thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:03,482 | INFO     | [payload] control thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:03,497 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:03,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:03,509 | INFO     | [data] control thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:03,642 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:03,707 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:03,836 | INFO     | [job] control thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:03,964 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:04,221 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:04,261 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:04,342 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:07,145 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:03:13] 2025-06-05 00:03:08,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623731328832)>', '<ExcThread(monitor, started 139623195989760)>']
[2025-06-04 19:03:13] 2025-06-05 00:03:08,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:03:13] 2025-06-05 00:03:08,986 | INFO     | [monitor] control thread has ended
[2025-06-04 19:03:13] 2025-06-05 00:03:13,262 | INFO     | all workflow threads have been joined
[2025-06-04 19:03:13] 2025-06-05 00:03:13,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:03:13] 2025-06-05 00:03:13,263 | INFO     | traces error code: 0
[2025-06-04 19:03:13] 2025-06-05 00:03:13,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:03:13] 2025-06-05 00:03:13,348 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:03:13] 2025-06-05 00:03:13,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:03:13] 2025-06-05 00:03:13,353 [wrapper] pilotpid: 426240
[2025-06-04 19:03:13] 2025-06-05 00:03:13,355 [wrapper] Pilot exit status: 0
[2025-06-04 19:03:13] 2025-06-05 00:03:13,361 [wrapper] pandaids: 6678313564
[2025-06-04 19:03:13] 2025-06-05 00:03:13,380 [wrapper] cleanup supervisor_pilot  443492 426241
[2025-06-04 19:03:13] 2025-06-05 00:03:13,382 [wrapper] Test setup, not cleaning
[2025-06-04 19:03:13] 2025-06-05 00:03:13,384 [wrapper] apfmon messages muted
[2025-06-04 19:03:13] 2025-06-05 00:03:13,386 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:03:13] 2025-06-05 00:03:13,387 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:03:13]  *** Error codes and diagnostics ***
[2025-06-04 19:03:13]     "exeErrorCode": 0,
[2025-06-04 19:03:13]     "exeErrorDiag": "",
[2025-06-04 19:03:13]     "pilotErrorCode": 0,
[2025-06-04 19:03:13]     "pilotErrorDiag": "",
[2025-06-04 19:03:13]  *** Listing of results directory ***
[2025-06-04 19:03:13] total 384828
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:04 pilot3.tar.gz
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:26 queuedata.json
[2025-06-04 19:03:13] -rwx------ 1 boinc boinc     37140 Jun  3 23:27 runpilot2-wrapper.sh
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc       100 Jun  4 17:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:03:13] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 17:58 run_atlas
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc       105 Jun  4 17:58 job.xml
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc      6748 Jun  4 17:58 init_data.xml
[2025-06-04 19:03:13] -rw-r--r-- 2 boinc boinc 215725733 Jun  4 17:58 EVNT.45006593._002104.pool.root.1
[2025-06-04 19:03:13] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:58 start_atlas.sh
[2025-06-04 19:03:13] drwxrwx--x 2 boinc boinc      4096 Jun  4 17:58 shared
[2025-06-04 19:03:13] -rw-r--r-- 2 boinc boinc    508876 Jun  4 17:58 input.tar.gz
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc         0 Jun  4 17:58 boinc_lockfile
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc      2525 Jun  4 17:58 pandaJob.out
[2025-06-04 19:03:13] -rw------- 1 boinc boinc    987032 Jun  4 17:58 agis_schedconf.cvmfs.json
[2025-06-04 19:03:13] -rw------- 1 boinc boinc   1598969 Jun  4 17:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:03:13] drwx------ 4 boinc boinc      4096 Jun  4 17:58 pilot3
[2025-06-04 19:03:13] -rw------- 1 boinc boinc        95 Jun  4 19:02 pilot_heartbeat.json
[2025-06-04 19:03:13] -rw------- 1 boinc boinc 173008294 Jun  4 19:02 HITS.45006595._052544.pool.root.1
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc       529 Jun  4 19:02 boinc_task_state.xml
[2025-06-04 19:03:13] -rw------- 1 boinc boinc      1030 Jun  4 19:02 memory_monitor_summary.json
[2025-06-04 19:03:13] -rw------- 1 boinc boinc    362618 Jun  4 19:02 log.45006595._052544.job.log.tgz.1
[2025-06-04 19:03:13] -rw------- 1 boinc boinc      7676 Jun  4 19:03 heartbeat.json
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc      8192 Jun  4 19:03 boinc_mmap_file
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc        27 Jun  4 19:03 wrapper_checkpoint.txt
[2025-06-04 19:03:13] -rw------- 1 boinc boinc      4360 Jun  4 19:03 pilotlog.txt
[2025-06-04 19:03:13] -rw------- 1 boinc boinc    384820 Jun  4 19:03 log.45006595._052544.job.log.1
[2025-06-04 19:03:13] -rw------- 1 boinc boinc       357 Jun  4 19:03 output.list
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc       620 Jun  4 19:03 runtime_log
[2025-06-04 19:03:13] -rw------- 1 boinc boinc    768000 Jun  4 19:03 result.tar.gz
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc      8696 Jun  4 19:03 runtime_log.err
[2025-06-04 19:03:13] -rw------- 1 boinc boinc       640 Jun  4 19:03 EHaNDmatug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3EnKDmcqdFqn.diag
[2025-06-04 19:03:13] -rw-r--r-- 1 boinc boinc     21510 Jun  4 19:03 stderr.txt
[2025-06-04 19:03:13] HITS file was successfully produced:
[2025-06-04 19:03:13] -rw------- 1 boinc boinc 173008294 Jun  4 19:02 shared/HITS.pool.root.1
[2025-06-04 19:03:13]  *** Contents of shared directory: ***
[2025-06-04 19:03:13] total 380904
[2025-06-04 19:03:13] -rw-r--r-- 2 boinc boinc 215725733 Jun  4 17:58 ATLAS.root_0
[2025-06-04 19:03:13] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:58 start_atlas.sh
[2025-06-04 19:03:13] -rw-r--r-- 2 boinc boinc    508876 Jun  4 17:58 input.tar.gz
[2025-06-04 19:03:13] -rw------- 1 boinc boinc 173008294 Jun  4 19:02 HITS.pool.root.1
[2025-06-04 19:03:13] -rw------- 1 boinc boinc    768000 Jun  4 19:03 result.tar.gz
19:03:14 (422544): run_atlas exited; CPU time 42047.949624
19:03:14 (422544): called boinc_finish(0)

</stderr_txt>
]]>

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