Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:11:30 (9522): wrapper (7.7.26015): starting
21:11:30 (9522): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:11:30] Arguments: --nthreads 8
[2025-06-04 21:11:30] Threads: 8
[2025-06-04 21:11:30] Checking for CVMFS
[2025-06-04 21:11:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:11:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:11:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:11:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:11:32] 2.11.2.0 30615 33589 93076 146791 3 159 14229219 25165825 4406 130560 0 17430020 99.837 18475533 2625 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 21:11:32] CVMFS is ok
[2025-06-04 21:11:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:11:32] Checking for apptainer binary...
[2025-06-04 21:11:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:11:32] Running /usr/bin/apptainer --version
[2025-06-04 21:11:33] apptainer version 1.3.2-1.el7
[2025-06-04 21:11:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:11:35] cg-vwn418.simple-grid.lan
[2025-06-04 21:11:35] apptainer works
[2025-06-04 21:11:45] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:11:45] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:11:46] Starting ATLAS job with PandaID=6678287252
[2025-06-04 21:11:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:44:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:44:26] 2025-06-04 22:51:00,351 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6678287252/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:44:26] 2025-06-04 22:51:00,352 | INFO     | extracted standard info from prmon json
[2025-06-05 02:44:26] 2025-06-04 22:51:00,352 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:44:26] 2025-06-04 22:51:00,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:44:26] 2025-06-04 22:51:00,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:44:26] 2025-06-04 22:51:00,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:44:26] 2025-06-04 22:51:00,358 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:44:26] 2025-06-04 22:51:00,358 | INFO     | sum of square deviations: 2996454322.0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,360 | INFO     | sum of deviations: 15476411260.000011
[2025-06-05 02:44:26] 2025-06-04 22:51:00,360 | INFO     | mean x: 1749070851.0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,361 | INFO     | mean y: 2463084.737089202
[2025-06-05 02:44:26] 2025-06-04 22:51:00,361 | INFO     | -- intersect: -9031327156.686188
[2025-06-05 02:44:26] 2025-06-04 22:51:00,361 | INFO     | intersect: -9031327156.686188
[2025-06-05 02:44:26] 2025-06-04 22:51:00,361 | INFO     | chi2: 2.529975275082576
[2025-06-05 02:44:26] 2025-06-04 22:51:00,362 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,369 | INFO     | sum of deviations: 29128895801.999996
[2025-06-05 02:44:26] 2025-06-04 22:51:00,369 | INFO     | mean x: 1749070698.5
[2025-06-05 02:44:26] 2025-06-04 22:51:00,369 | INFO     | mean y: 2472988.903846154
[2025-06-05 02:44:26] 2025-06-04 22:51:00,369 | INFO     | -- intersect: -18256359141.272034
[2025-06-05 02:44:26] 2025-06-04 22:51:00,369 | INFO     | intersect: -18256359141.272034
[2025-06-05 02:44:26] 2025-06-04 22:51:00,370 | INFO     | chi2: 1.7582573692487324
[2025-06-05 02:44:26] 2025-06-04 22:51:00,370 | INFO     | current chi2=1.7582573692487324 (change=30.50298212138281 %)
[2025-06-05 02:44:26] 2025-06-04 22:51:00,370 | INFO     | sum of square deviations: 2593916542.0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,372 | INFO     | sum of deviations: 28520357727.99998
[2025-06-05 02:44:26] 2025-06-04 22:51:00,372 | INFO     | mean x: 1749070546.0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,372 | INFO     | mean y: 2472516.408866995
[2025-06-05 02:44:26] 2025-06-04 22:51:00,372 | INFO     | -- intersect: -19228723574.798393
[2025-06-05 02:44:26] 2025-06-04 22:51:00,372 | INFO     | intersect: -19228723574.798393
[2025-06-05 02:44:26] 2025-06-04 22:51:00,373 | INFO     | chi2: 1.7593792928754786
[2025-06-05 02:44:26] 2025-06-04 22:51:00,373 | INFO     | current chi2=1.7593792928754786 (change=-0.06380883972779816 %)
[2025-06-05 02:44:26] 2025-06-04 22:51:00,373 | INFO     | right removable region: 202
[2025-06-05 02:44:26] 2025-06-04 22:51:00,374 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,375 | INFO     | sum of deviations: -24000667282.0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,375 | INFO     | mean x: 1749071003.5
[2025-06-05 02:44:26] 2025-06-04 22:51:00,375 | INFO     | mean y: 2492089.826923077
[2025-06-05 02:44:26] 2025-06-04 22:51:00,376 | INFO     | -- intersect: 15046805280.062698
[2025-06-05 02:44:26] 2025-06-04 22:51:00,376 | INFO     | intersect: 15046805280.062698
[2025-06-05 02:44:26] 2025-06-04 22:51:00,376 | INFO     | chi2: 0.8494957346224783
[2025-06-05 02:44:26] 2025-06-04 22:51:00,376 | INFO     | current chi2=0.8494957346224783 (change=66.42276535312182 %)
[2025-06-05 02:44:26] 2025-06-04 22:51:00,377 | INFO     | sum of square deviations: 2593916542.0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,378 | INFO     | sum of deviations: -28124255936.0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,378 | INFO     | mean x: 1749071156.0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,378 | INFO     | mean y: 2495247.9556650245
[2025-06-05 02:44:26] 2025-06-04 22:51:00,379 | INFO     | -- intersect: 18966607641.367966
[2025-06-05 02:44:26] 2025-06-04 22:51:00,379 | INFO     | intersect: 18966607641.367966
[2025-06-05 02:44:26] 2025-06-04 22:51:00,379 | INFO     | chi2: 0.8102889560995208
[2025-06-05 02:44:26] 2025-06-04 22:51:00,379 | INFO     | current chi2=0.8102889560995208 (change=4.615300221652233 %)
[2025-06-05 02:44:26] 2025-06-04 22:51:00,379 | INFO     | left removable region: 20
[2025-06-05 02:44:26] 2025-06-04 22:51:00,380 | INFO     | sum of square deviations: 1869302025.5
[2025-06-05 02:44:26] 2025-06-04 22:51:00,381 | INFO     | sum of deviations: -12332658652.000002
[2025-06-05 02:44:26] 2025-06-04 22:51:00,381 | INFO     | mean x: 1749071125.5
[2025-06-05 02:44:26] 2025-06-04 22:51:00,381 | INFO     | mean y: 2505716.032967033
[2025-06-05 02:44:26] 2025-06-04 22:51:00,381 | INFO     | -- intersect: 11541944958.383991
[2025-06-05 02:44:26] 2025-06-04 22:51:00,382 | INFO     | intersect: 11541944958.383991
[2025-06-05 02:44:26] 2025-06-04 22:51:00,382 | INFO     | chi2: 0.014722043164680112
[2025-06-05 02:44:26] 2025-06-04 22:51:00,382 | INFO     | -- intersect: 11541944958.383991
[2025-06-05 02:44:26] 2025-06-04 22:51:00,382 | INFO     | current memory leak: -6.60 B/s (using 182 data points, chi2=0.01)
[2025-06-05 02:44:26] 2025-06-04 22:51:00,383 | INFO     | ..............................
[2025-06-05 02:44:26] 2025-06-04 22:51:00,383 | INFO     | . Timing measurements:
[2025-06-05 02:44:26] 2025-06-04 22:51:00,383 | INFO     | . get job = 0 s
[2025-06-05 02:44:26] 2025-06-04 22:51:00,383 | INFO     | . initial setup = 4 s
[2025-06-05 02:44:26] 2025-06-04 22:51:00,383 | INFO     | . payload setup = 15 s
[2025-06-05 02:44:26] 2025-06-04 22:51:00,384 | INFO     | . stage-in = 0 s
[2025-06-05 02:44:26] 2025-06-04 22:51:00,384 | INFO     | . payload execution = 13003 s
[2025-06-05 02:44:26] 2025-06-04 22:51:00,384 | INFO     | . stage-out = 3 s
[2025-06-05 02:44:26] 2025-06-04 22:51:00,384 | INFO     | . log creation = 1 s
[2025-06-05 02:44:26] 2025-06-04 22:51:00,384 | INFO     | ..............................
[2025-06-05 02:44:26] 2025-06-04 22:51:00,521 | INFO     | 
[2025-06-05 02:44:26] 2025-06-04 22:51:00,521 | INFO     | job summary report
[2025-06-05 02:44:26] 2025-06-04 22:51:00,521 | INFO     | --------------------------------------------------
[2025-06-05 02:44:26] 2025-06-04 22:51:00,521 | INFO     | PanDA job id: 6678287252
[2025-06-05 02:44:26] 2025-06-04 22:51:00,521 | INFO     | task id: 45006595
[2025-06-05 02:44:26] 2025-06-04 22:51:00,521 | INFO     | errors: (none)
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | pilot state: finished 
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | transexitcode: 0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | exeerrorcode: 0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | exeerrordiag: 
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | exitcode: 0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | exitmsg: OK
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | cpuconsumptiontime: 49400 s
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | nevents: 400
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | neventsw: 0
[2025-06-05 02:44:26] 2025-06-04 22:51:00,522 | INFO     | pid: 21741
[2025-06-05 02:44:26] 2025-06-04 22:51:00,523 | INFO     | pgrp: 21741
[2025-06-05 02:44:26] 2025-06-04 22:51:00,523 | INFO     | corecount: 8
[2025-06-05 02:44:26] 2025-06-04 22:51:00,523 | INFO     | event service: False
[2025-06-05 02:44:26] 2025-06-04 22:51:00,523 | INFO     | sizes: {0: 2397171, 1: 2397370, 9: 2397576, 12: 2397604, 13024: 2427059, 13029: 2436000, 13030: 2436184, 13113: 2436354}
[2025-06-05 02:44:26] 2025-06-04 22:51:00,523 | INFO     | --------------------------------------------------
[2025-06-05 02:44:26] 2025-06-04 22:51:00,523 | INFO     | 
[2025-06-05 02:44:26] 2025-06-04 22:51:00,523 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-05 02:44:26] 2025-06-04 22:51:00,914 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,914 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,914 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,914 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:44:26] 2025-06-04 22:51:00,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:44:26] 2025-06-04 22:51:00,916 | INFO     | job 6678287252 has completed (purged errors)
[2025-06-05 02:44:26] 2025-06-04 22:51:00,916 | INFO     | overall cleanup function is called
[2025-06-05 02:44:26] 2025-06-04 22:51:01,925 | INFO     | --- collectZombieJob: --- 10, [21741]
[2025-06-05 02:44:26] 2025-06-04 22:51:01,925 | INFO     | zombie collector waiting for pid 21741
[2025-06-05 02:44:26] 2025-06-04 22:51:01,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:44:26] 2025-06-04 22:51:01,926 | INFO     | collected zombie processes
[2025-06-05 02:44:26] 2025-06-04 22:51:01,926 | INFO     | will attempt to kill all subprocesses of pid=21741
[2025-06-05 02:44:26] 2025-06-04 22:51:02,041 | INFO     | process IDs to be killed: [21741] (in reverse order)
[2025-06-05 02:44:26] 2025-06-04 22:51:02,825 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:44:26] 2025-06-04 22:51:02,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:44:26] 2025-06-04 22:51:02,828 | INFO     | did not find any defunct processes belonging to 21741
[2025-06-05 02:44:26] 2025-06-04 22:51:02,831 | INFO     | did not find any defunct processes belonging to 21741
[2025-06-05 02:44:26] 2025-06-04 22:51:02,832 | INFO     | ready for new job
[2025-06-05 02:44:26] 2025-06-04 22:51:02,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:44:26] 2025-06-04 22:51:02,834 | INFO     | **************************************
[2025-06-05 02:44:26] 2025-06-04 22:51:02,834 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:44:26] 2025-06-04 22:51:02,834 | INFO     | **************************************
[2025-06-05 02:44:26] 2025-06-04 22:51:02,835 | INFO     | 
[2025-06-05 02:44:26] 2025-06-04 22:51:02,835 | INFO     | pilot is running in a VM
[2025-06-05 02:44:26] 2025-06-04 22:51:02,835 | INFO     | architecture information:
[2025-06-05 02:44:26] 2025-06-04 22:51:02,836 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:44:26] 2025-06-04 22:51:03,139 | INFO     | cat /etc/os-release:
[2025-06-05 02:44:26] NAME="CentOS Linux"
[2025-06-05 02:44:26] VERSION="7 (Core)"
[2025-06-05 02:44:26] ID="centos"
[2025-06-05 02:44:26] ID_LIKE="rhel fedora"
[2025-06-05 02:44:26] VERSION_ID="7"
[2025-06-05 02:44:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:44:26] ANSI_COLOR="0;31"
[2025-06-05 02:44:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:44:26] HOME_URL="https://www.centos.org/"
[2025-06-05 02:44:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:44:26] 
[2025-06-05 02:44:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:44:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:44:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:44:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:44:26] 
[2025-06-05 02:44:26] 2025-06-04 22:51:03,139 | INFO     | **************************************
[2025-06-05 02:44:26] 2025-06-04 22:51:03,642 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-05 02:44:26] 2025-06-04 22:51:03,940 | INFO     | sufficient remaining disk space (496476618752 B)
[2025-06-05 02:44:26] 2025-06-04 22:51:03,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:44:26] 2025-06-04 22:51:03,940 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:44:26] 2025-06-04 22:51:03,940 | INFO     | update_server=False
[2025-06-05 02:44:26] 2025-06-04 22:51:03,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:44:26] 2025-06-04 22:51:03,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:44:26] 2025-06-04 22:51:04,472 | INFO     | all data control threads have been joined
[2025-06-05 02:44:26] 2025-06-04 22:51:04,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:44:26] 2025-06-04 22:51:04,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:44:26] 2025-06-04 22:51:04,753 | INFO     | aborting loop
[2025-06-05 02:44:26] 2025-06-04 22:51:04,901 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:44:26] 2025-06-04 22:51:04,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:44:26] 2025-06-04 22:51:04,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:44:26] 2025-06-04 22:51:04,945 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:05,043 | INFO     | all payload control threads have been joined
[2025-06-05 02:44:26] 2025-06-04 22:51:05,172 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:05,357 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:05,478 | INFO     | [data] control thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:05,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:44:26] 2025-06-04 22:51:05,576 | INFO     | all job control threads have been joined
[2025-06-05 02:44:26] 2025-06-04 22:51:05,662 | INFO     | [job] validate thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:05,721 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:05,759 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:05,854 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:05,948 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:06,049 | INFO     | [payload] control thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:06,050 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:06,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:06,291 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:06,541 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:06,582 | INFO     | [job] control thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:08,560 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:44:26] 2025-06-04 22:51:09,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140349277206336)>', '<ExcThread(monitor, started 140348835743488)>']
[2025-06-05 02:44:26] 2025-06-04 22:51:09,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:44:26] 2025-06-04 22:51:09,931 | INFO     | [monitor] control thread has ended
[2025-06-05 02:44:26] 2025-06-04 22:51:14,948 | INFO     | all workflow threads have been joined
[2025-06-05 02:44:26] 2025-06-04 22:51:14,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:44:26] 2025-06-04 22:51:14,949 | INFO     | traces error code: 0
[2025-06-05 02:44:26] 2025-06-04 22:51:14,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:44:26] 2025-06-04 22:51:15,331 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:44:26] 2025-06-04 22:51:15,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:44:26] 2025-06-04 22:51:15,572 [wrapper] pilotpid: 14088
[2025-06-05 02:44:26] 2025-06-04 22:51:15,695 [wrapper] Pilot exit status: 0
[2025-06-05 02:44:26] 2025-06-04 22:51:16,252 [wrapper] pandaids: 6678287252
[2025-06-05 02:44:26] 2025-06-04 22:51:17,055 [wrapper] cleanup supervisor_pilot  8896 14089
[2025-06-05 02:44:26] 2025-06-04 22:51:17,139 [wrapper] Test setup, not cleaning
[2025-06-05 02:44:26] 2025-06-04 22:51:17,249 [wrapper] apfmon messages muted
[2025-06-05 02:44:26] 2025-06-04 22:51:17,370 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:44:26] 2025-06-04 22:51:17,467 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:44:26]  *** Error codes and diagnostics ***
[2025-06-05 02:44:26]     "exeErrorCode": 0,
[2025-06-05 02:44:26]     "exeErrorDiag": "",
[2025-06-05 02:44:26]     "pilotErrorCode": 0,
[2025-06-05 02:44:26]     "pilotErrorDiag": "",
[2025-06-05 02:44:26]  *** Listing of results directory ***
[2025-06-05 02:44:26] total 391492
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-05 02:44:26] -rwx------. 1 boinc boinc     37140 Jun  4 06:07 runpilot2-wrapper.sh
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc      5111 Jun  4 06:07 queuedata.json
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc       100 Jun  4 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:44:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 21:11 run_atlas
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc       105 Jun  4 21:11 job.xml
[2025-06-05 02:44:26] -rw-r--r--. 2 boinc boinc 216199708 Jun  4 21:11 EVNT.45006593._002079.pool.root.1
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc      6392 Jun  4 21:11 init_data.xml
[2025-06-05 02:44:26] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:11 start_atlas.sh
[2025-06-05 02:44:26] drwxrwx--x. 2 boinc boinc        68 Jun  4 21:11 shared
[2025-06-05 02:44:26] -rw-r--r--. 2 boinc boinc    508875 Jun  4 21:11 input.tar.gz
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc         0 Jun  4 21:11 boinc_lockfile
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc      2525 Jun  4 21:11 pandaJob.out
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc    990984 Jun  4 21:12 agis_schedconf.cvmfs.json
[2025-06-05 02:44:26] drwx------. 4 boinc boinc      4096 Jun  4 21:12 pilot3
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc 177807804 Jun  5 00:48 HITS.45006595._051899.pool.root.1
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc       531 Jun  5 00:48 boinc_task_state.xml
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc      1018 Jun  5 00:49 memory_monitor_summary.json
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc   1598969 Jun  5 00:49 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc    385804 Jun  5 00:49 log.45006595._051899.job.log.tgz.1
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc        95 Jun  5 00:50 pilot_heartbeat.json
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc      7691 Jun  5 00:51 heartbeat.json
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc      4416 Jun  5 00:51 pilotlog.txt
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc   1140812 Jun  5 00:51 log.45006595._051899.job.log.1
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc       357 Jun  5 00:51 output.list
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc       620 Jun  5 00:51 runtime_log
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc   1546240 Jun  5 00:51 result.tar.gz
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc      8659 Jun  5 00:51 runtime_log.err
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc       657 Jun  5 00:51 aCUNDmiaug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDma6mKDma7d5Dm.diag
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc      8192 Jun  5 02:44 boinc_mmap_file
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc        28 Jun  5 02:44 wrapper_checkpoint.txt
[2025-06-05 02:44:26] -rw-r--r--. 1 boinc boinc     20495 Jun  5 02:44 stderr.txt
[2025-06-05 02:44:26] HITS file was successfully produced:
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc 177807804 Jun  5 00:48 shared/HITS.pool.root.1
[2025-06-05 02:44:26]  *** Contents of shared directory: ***
[2025-06-05 02:44:26] total 386808
[2025-06-05 02:44:26] -rw-r--r--. 2 boinc boinc 216199708 Jun  4 21:11 ATLAS.root_0
[2025-06-05 02:44:26] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:11 start_atlas.sh
[2025-06-05 02:44:26] -rw-r--r--. 2 boinc boinc    508875 Jun  4 21:11 input.tar.gz
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc 177807804 Jun  5 00:48 HITS.pool.root.1
[2025-06-05 02:44:26] -rw-------. 1 boinc boinc   1546240 Jun  5 00:51 result.tar.gz
02:44:28 (9522): run_atlas exited; CPU time 49559.901665
02:44:28 (9522): called boinc_finish(0)

</stderr_txt>
]]>

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