Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-08 16:33:49 (79598): Detected: vboxwrapper 26206
2025-06-08 16:33:49 (79598): Detected: BOINC client v8.0.2
2025-06-08 16:33:49 (79598): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-06-08 16:33:49 (79598): Detected: Sandbox Configuration Enabled
2025-06-08 16:33:49 (79598): Successfully copied 'init_data.xml' to the shared directory.
2025-06-08 16:33:49 (79598): Create VM. (boinc_6d839eb8d68ec2ce, slot#1)
2025-06-08 16:33:49 (79598): Setting Memory Size for VM. (4800MB)
2025-06-08 16:33:49 (79598): Setting CPU Count for VM. (8)
2025-06-08 16:33:49 (79598): Setting Chipset Options for VM.
2025-06-08 16:33:49 (79598): Setting Graphics Controller Options for VM.
2025-06-08 16:33:50 (79598): Setting Boot Options for VM.
2025-06-08 16:33:50 (79598): Setting Network Configuration for NAT.
2025-06-08 16:33:50 (79598): Enabling VM Network Access.
2025-06-08 16:33:50 (79598): Disabling USB Support for VM.
2025-06-08 16:33:50 (79598): Disabling COM Port Support for VM.
2025-06-08 16:33:50 (79598): Disabling Audio Support for VM.
2025-06-08 16:33:50 (79598): Disabling Clipboard Support for VM.
2025-06-08 16:33:50 (79598): Disabling Drag and Drop Support for VM.
2025-06-08 16:33:50 (79598): Adding storage controller(s) to VM.
2025-06-08 16:33:50 (79598): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-08 16:33:51 (79598): Adding VirtualBox Guest Additions to VM.
2025-06-08 16:33:51 (79598): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-08 16:33:51 (79598): forwarding host port 58795 to guest port 80
2025-06-08 16:33:52 (79598): Enabling remote desktop for VM.
2025-06-08 16:33:52 (79598): Required extension pack not installed, remote desktop not enabled.
2025-06-08 16:33:52 (79598): Enabling shared directory for VM.
2025-06-08 16:33:52 (79598): Starting VM using VBoxManage interface. (boinc_6d839eb8d68ec2ce, slot#1)
2025-06-08 16:33:56 (79598): Successfully started VM. (PID = '79670')
2025-06-08 16:33:56 (79598): Reporting VM Process ID to BOINC.
2025-06-08 16:33:56 (79598): Guest Log: BIOS: VirtualBox 7.1.6
2025-06-08 16:33:56 (79598): Guest Log: CPUID EDX: 0x178bfbff
2025-06-08 16:33:56 (79598): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-08 16:33:56 (79598): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-08 16:33:56 (79598): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-08 16:33:56 (79598): Detected: Web Application Enabled (http://localhost:58795)
2025-06-08 16:33:56 (79598): Preference change detected
2025-06-08 16:33:56 (79598): Setting CPU throttle for VM. (100%)
2025-06-08 16:33:56 (79598): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-08 16:33:58 (79598): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-08 16:33:58 (79598): Guest Log: BIOS: Booting from Hard Disk...
2025-06-08 16:34:01 (79598): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-08 16:34:01 (79598): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-08 16:34:01 (79598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-08 16:34:09 (79598): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-08 16:34:09 (79598): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-08 16:34:21 (79598): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-08 16:34:21 (79598): Guest Log: 00:00:00.000204 main     Log opened 2025-06-08T14:34:19.492343000Z
2025-06-08 16:34:21 (79598): Guest Log: 00:00:00.000362 main     OS Product: Linux
2025-06-08 16:34:21 (79598): Guest Log: 00:00:00.000419 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-08 16:34:21 (79598): Guest Log: 00:00:00.000468 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-08 16:34:21 (79598): Guest Log: 00:00:00.000526 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-08 16:34:21 (79598): Guest Log: 00:00:00.000527 main     Process ID: 1372
2025-06-08 16:34:21 (79598): Guest Log: 00:00:00.000528 main     Package type: LINUX_64BITS_GENERIC
2025-06-08 16:34:21 (79598): Guest Log: 00:00:00.003717 main     5.2.32 r132073 started. Verbose level = 0
2025-06-08 16:34:44 (79598): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-08 16:34:44 (79598): Guest Log: [INFO] Mounting shared directory
2025-06-08 16:34:44 (79598): Guest Log: [INFO] Checking for init_data.xml
2025-06-08 16:37:38 (79598): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-08 16:37:38 (79598): Guest Log: [INFO] Detected branch: prod
2025-06-08 16:37:39 (79598): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-08 16:37:39 (79598): Guest Log: Copying input files
2025-06-08 16:37:42 (79598): Guest Log: Copied input files into RunAtlas.
2025-06-08 16:37:43 (79598): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-08 16:37:43 (79598): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-08 16:37:43 (79598): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-08 16:37:43 (79598): Guest Log: Further information can be found at the LHC@home message board.
2025-06-08 16:40:34 (79598): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-08 16:40:34 (79598): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-08 16:40:34 (79598): Guest Log: 2.6.3.0 1714 4 31432 146936 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
2025-06-08 16:40:36 (79598): Guest Log: copied the webapp to /var/www
2025-06-08 16:40:36 (79598): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-08 16:40:36 (79598): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-08 16:40:36 (79598): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-08 16:40:36 (79598): Guest Log:  *** Starting ATLAS job. (PandaID=6678313231 taskID=45006595) ***
2025-06-08 18:03:50 (79598): VM state change detected. (old = 'running', new = 'paused')
2025-06-08 18:04:10 (79598): VM state change detected. (old = 'paused', new = 'running')
2025-06-08 18:05:46 (79598): VM state change detected. (old = 'running', new = 'paused')
2025-06-08 18:06:07 (79598): VM state change detected. (old = 'paused', new = 'running')
2025-06-08 18:14:19 (79598): VM state change detected. (old = 'running', new = 'paused')
2025-06-08 18:14:39 (79598): VM state change detected. (old = 'paused', new = 'running')
2025-06-08 18:14:59 (79598): Status Report: Elapsed Time: '6000.000000'
2025-06-08 18:14:59 (79598): Status Report: CPU Time: '32390.860000'
2025-06-08 18:15:33 (79598): VM state change detected. (old = 'running', new = 'paused')
2025-06-08 18:15:54 (79598): VM state change detected. (old = 'paused', new = 'running')
2025-06-08 19:55:19 (79598): Status Report: Elapsed Time: '12000.000000'
2025-06-08 19:55:19 (79598): Status Report: CPU Time: '74416.620000'
2025-06-08 20:00:45 (79598): Guest Log:  *** Job finished ***
2025-06-08 20:00:45 (79598): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:37,189 | INFO     | all workflow threads have been joined
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:37,190 | INFO     | end of generic workflow (traces error code: 0)
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:37,190 | INFO     | traces error code: 0
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:37,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,432 | INFO     | PID=6260 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,433 | INFO     | found 0 job(s) in 20 queues
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,433 | INFO     | [monitor] control thread has ended
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,586 [wrapper] ==== pilot stdout END ====
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,608 [wrapper] ==== wrapper stdout RESUME ====
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,629 [wrapper] pilotpid: 6260
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,651 [wrapper] Pilot exit status: 0
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:50,946 [wrapper] pandaids: 6678313231
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:51,086 [wrapper] cleanup supervisor_pilot  6559 6261
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:51,110 [wrapper] Test setup, not cleaning
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:51,135 [wrapper] apfmon messages muted
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:51,157 [wrapper] ==== wrapper stdout END ====
2025-06-08 20:00:45 (79598): Guest Log: 2025-06-08 17:59:51,179 [wrapper] ==== wrapper stderr END ====
2025-06-08 20:00:45 (79598): Guest Log:  *** Error codes and diagnostics ***
2025-06-08 20:00:45 (79598): Guest Log:     "exeErrorCode": 0,
2025-06-08 20:00:45 (79598): Guest Log:     "exeErrorDiag": "",
2025-06-08 20:00:45 (79598): Guest Log:     "pilotErrorCode": 0,
2025-06-08 20:00:45 (79598): Guest Log:     "pilotErrorDiag": "",
2025-06-08 20:00:45 (79598): Guest Log:  *** Listing of results directory ***
2025-06-08 20:00:46 (79598): Guest Log: total 184396
2025-06-08 20:00:46 (79598): Guest Log: -rw-r--r--. 1 atlas atlas    549845 Jun  2 09:40 pilot3.tar.gz
2025-06-08 20:00:46 (79598): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 04:19 runpilot2-wrapper.sh
2025-06-08 20:00:46 (79598): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 04:19 queuedata.json
2025-06-08 20:00:46 (79598): Guest Log: -rw-r-----. 1 atlas atlas     15093 Jun  8 14:37 start_atlas.sh
2025-06-08 20:00:46 (79598): Guest Log: -rw-r-----. 1 atlas atlas    564110 Jun  8 14:37 input.tar.gz
2025-06-08 20:00:46 (79598): Guest Log: -rw-r--r--. 1 atlas atlas      8060 Jun  8 14:37 init_data.xml
2025-06-08 20:00:46 (79598): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  8 14:37 EVNT.45006593._002095.pool.root.1 -> /data/./ATLAS.root_0
2025-06-08 20:00:46 (79598): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  8 14:40 pandaJob.out
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas    985850 Jun  8 14:50 agis_schedconf.cvmfs.json
2025-06-08 20:00:46 (79598): Guest Log: drwx------. 6 atlas atlas      4096 Jun  8 14:51 pilot3
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas 182805723 Jun  8 17:52 HITS.45006595._052325.pool.root.1
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas      1034 Jun  8 17:52 memory_monitor_summary.json
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  8 17:52 agis_ddmendpoints.agis.ALL.json
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas    350511 Jun  8 17:52 log.45006595._052325.job.log.tgz.1
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas        95 Jun  8 17:58 pilot_heartbeat.json
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas      7732 Jun  8 17:59 heartbeat.json
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas       744 Jun  8 17:59 pilotlog.txt
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas    727758 Jun  8 17:59 log.45006595._052325.job.log.1
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas       357 Jun  8 17:59 output.list
2025-06-08 20:00:46 (79598): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  8 17:59 runtime_log
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas   1095680 Jun  8 17:59 result.tar.gz
2025-06-08 20:00:46 (79598): Guest Log: -rw-r--r--. 1 atlas atlas      8628 Jun  8 17:59 runtime_log.err
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas       673 Jun  8 17:59 Km2LDm8lug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNCnKDmHGtTOn.diag
2025-06-08 20:00:46 (79598): Guest Log: Looking for outputfile HITS.45006595._052325.pool.root.1
2025-06-08 20:00:46 (79598): Guest Log: HITS file was successfully produced
2025-06-08 20:00:46 (79598): Guest Log: -rw-------. 1 atlas atlas 182805723 Jun  8 17:52 /home/atlas/RunAtlas/HITS.45006595._052325.pool.root.1
2025-06-08 20:00:46 (79598): Guest Log: Successfully finished the ATLAS job!
2025-06-08 20:00:46 (79598): Guest Log: Copying the results back to the shared directory!
2025-06-08 20:00:46 (79598): Guest Log:  *** Contents of shared directory: ***
2025-06-08 20:00:46 (79598): Guest Log: total 210916
2025-06-08 20:00:46 (79598): Guest Log: -rw-rw----. 1 root root 214287665 Jun  8 14:33 ATLAS.root_0
2025-06-08 20:00:46 (79598): Guest Log: -rw-rw-r--. 1 root root      8060 Jun  8 14:33 init_data.xml
2025-06-08 20:00:46 (79598): Guest Log: -rw-rw----. 1 root root    564110 Jun  8 14:33 input.tar.gz
2025-06-08 20:00:46 (79598): Guest Log: -rw-r--r--. 1 root root   1095680 Jun  8  2025 result.tar.gz
2025-06-08 20:00:46 (79598): Guest Log: -rw-rw----. 1 root root     15093 Jun  8 14:33 start_atlas.sh
2025-06-08 20:00:46 (79598): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-08 20:00:46 (79598): VM Completion File Detected.
2025-06-08 20:00:46 (79598): Powering off VM.
2025-06-08 20:00:47 (79598): Successfully stopped VM.
2025-06-08 20:00:47 (79598): Deregistering VM. (boinc_6d839eb8d68ec2ce, slot#1)
2025-06-08 20:00:47 (79598): Removing network bandwidth throttle group from VM.
2025-06-08 20:00:47 (79598): Removing VM from VirtualBox.
20:00:52 (79598): called boinc_finish(0)

</stderr_txt>
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