Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:48:59 (9075): wrapper (7.7.26015): starting
21:48:59 (9075): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:48:59] Arguments: --nthreads 8
[2025-06-04 21:48:59] Threads: 8
[2025-06-04 21:48:59] Checking for CVMFS
[2025-06-04 21:49:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:49:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:49:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:49:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:49:01] 2.11.2.0 16344 33648 89820 146792 0 201 18851302 25165825 2021 130560 0 17405830 99.786 20197181 2106 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 21:49:01] CVMFS is ok
[2025-06-04 21:49:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:49:01] Checking for apptainer binary...
[2025-06-04 21:49:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:49:01] Running /usr/bin/apptainer --version
[2025-06-04 21:49:01] apptainer version 1.3.2-1.el7
[2025-06-04 21:49:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:49:14] cg-vwn432.simple-grid.lan
[2025-06-04 21:49:14] apptainer works
[2025-06-04 21:49:14] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:49:14] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:49:14] Starting ATLAS job with PandaID=6678312737
[2025-06-04 21:49:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:15:13]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:15:13] 2025-06-04 23:33:35,851 | INFO     | extracted standard info from prmon json
[2025-06-05 03:15:13] 2025-06-04 23:33:35,851 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:15:13] 2025-06-04 23:33:35,851 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:15:13] 2025-06-04 23:33:35,851 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:15:13] 2025-06-04 23:33:35,851 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:15:13] 2025-06-04 23:33:35,857 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:15:13] 2025-06-04 23:33:35,858 | INFO     | sum of square deviations: 3212467674.5
[2025-06-05 03:15:13] 2025-06-04 23:33:35,860 | INFO     | sum of deviations: 1414408829.9999924
[2025-06-05 03:15:13] 2025-06-04 23:33:35,860 | INFO     | mean x: 1749073256.5
[2025-06-05 03:15:13] 2025-06-04 23:33:35,860 | INFO     | mean y: 2471980.5871559633
[2025-06-05 03:15:13] 2025-06-04 23:33:35,860 | INFO     | -- intersect: -767622821.5949358
[2025-06-05 03:15:13] 2025-06-04 23:33:35,860 | INFO     | intersect: -767622821.5949358
[2025-06-05 03:15:13] 2025-06-04 23:33:35,861 | INFO     | chi2: 2.504547419391158
[2025-06-05 03:15:13] 2025-06-04 23:33:35,862 | INFO     | sum of square deviations: 2996454322.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,863 | INFO     | sum of deviations: 15564574620.999998
[2025-06-05 03:15:13] 2025-06-04 23:33:35,864 | INFO     | mean x: 1749073104.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,864 | INFO     | mean y: 2481781.647887324
[2025-06-05 03:15:13] 2025-06-04 23:33:35,864 | INFO     | -- intersect: -9082782306.95052
[2025-06-05 03:15:13] 2025-06-04 23:33:35,864 | INFO     | intersect: -9082782306.95052
[2025-06-05 03:15:13] 2025-06-04 23:33:35,864 | INFO     | chi2: 1.7360402801784292
[2025-06-05 03:15:13] 2025-06-04 23:33:35,864 | INFO     | current chi2=1.7360402801784292 (change=30.684471504218862 %)
[2025-06-05 03:15:13] 2025-06-04 23:33:35,865 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,866 | INFO     | sum of deviations: 15104844705.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,867 | INFO     | mean x: 1749072951.5
[2025-06-05 03:15:13] 2025-06-04 23:33:35,867 | INFO     | mean y: 2481441.5384615385
[2025-06-05 03:15:13] 2025-06-04 23:33:35,867 | INFO     | -- intersect: -9465683124.431723
[2025-06-05 03:15:13] 2025-06-04 23:33:35,867 | INFO     | intersect: -9465683124.431723
[2025-06-05 03:15:13] 2025-06-04 23:33:35,867 | INFO     | chi2: 1.7369631705709339
[2025-06-05 03:15:13] 2025-06-04 23:33:35,867 | INFO     | current chi2=1.7369631705709339 (change=-0.05316065548950574 %)
[2025-06-05 03:15:13] 2025-06-04 23:33:35,867 | INFO     | right removable region: 207
[2025-06-05 03:15:13] 2025-06-04 23:33:35,868 | INFO     | sum of square deviations: 2996454322.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,869 | INFO     | sum of deviations: -35155619186.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,870 | INFO     | mean x: 1749073409.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,870 | INFO     | mean y: 2497570.3896713615
[2025-06-05 03:15:13] 2025-06-04 23:33:35,870 | INFO     | -- intersect: 20523337232.020535
[2025-06-05 03:15:13] 2025-06-04 23:33:35,870 | INFO     | intersect: 20523337232.020535
[2025-06-05 03:15:13] 2025-06-04 23:33:35,870 | INFO     | chi2: 0.9404110808661852
[2025-06-05 03:15:13] 2025-06-04 23:33:35,871 | INFO     | current chi2=0.9404110808661852 (change=62.451855629277965 %)
[2025-06-05 03:15:13] 2025-06-04 23:33:35,871 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,872 | INFO     | sum of deviations: -36042779274.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,873 | INFO     | mean x: 1749073561.5
[2025-06-05 03:15:13] 2025-06-04 23:33:35,873 | INFO     | mean y: 2498202.1153846155
[2025-06-05 03:15:13] 2025-06-04 23:33:35,873 | INFO     | -- intersect: 22595188909.116226
[2025-06-05 03:15:13] 2025-06-04 23:33:35,873 | INFO     | intersect: 22595188909.116226
[2025-06-05 03:15:13] 2025-06-04 23:33:35,873 | INFO     | chi2: 0.9257950446626914
[2025-06-05 03:15:13] 2025-06-04 23:33:35,874 | INFO     | current chi2=0.9257950446626914 (change=1.5542177778287585 %)
[2025-06-05 03:15:13] 2025-06-04 23:33:35,874 | INFO     | left removable region: 20
[2025-06-05 03:15:13] 2025-06-04 23:33:35,874 | INFO     | sum of square deviations: 2027639878.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,875 | INFO     | sum of deviations: -7961086332.000001
[2025-06-05 03:15:13] 2025-06-04 23:33:35,876 | INFO     | mean x: 1749073531.0
[2025-06-05 03:15:13] 2025-06-04 23:33:35,876 | INFO     | mean y: 2497723.8021390373
[2025-06-05 03:15:13] 2025-06-04 23:33:35,876 | INFO     | -- intersect: 6869853970.041384
[2025-06-05 03:15:13] 2025-06-04 23:33:35,876 | INFO     | intersect: 6869853970.041384
[2025-06-05 03:15:13] 2025-06-04 23:33:35,876 | INFO     | chi2: 0.07859558682698664
[2025-06-05 03:15:13] 2025-06-04 23:33:35,876 | INFO     | -- intersect: 6869853970.041384
[2025-06-05 03:15:13] 2025-06-04 23:33:35,877 | INFO     | current memory leak: -3.93 B/s (using 187 data points, chi2=0.08)
[2025-06-05 03:15:13] 2025-06-04 23:33:35,877 | INFO     | ..............................
[2025-06-05 03:15:13] 2025-06-04 23:33:35,877 | INFO     | . Timing measurements:
[2025-06-05 03:15:13] 2025-06-04 23:33:35,878 | INFO     | . get job = 0 s
[2025-06-05 03:15:13] 2025-06-04 23:33:35,878 | INFO     | . initial setup = 2 s
[2025-06-05 03:15:13] 2025-06-04 23:33:35,878 | INFO     | . payload setup = 15 s
[2025-06-05 03:15:13] 2025-06-04 23:33:35,878 | INFO     | . stage-in = 0 s
[2025-06-05 03:15:13] 2025-06-04 23:33:35,878 | INFO     | . payload execution = 13299 s
[2025-06-05 03:15:13] 2025-06-04 23:33:35,878 | INFO     | . stage-out = 7 s
[2025-06-05 03:15:13] 2025-06-04 23:33:35,878 | INFO     | . log creation = 1 s
[2025-06-05 03:15:13] 2025-06-04 23:33:35,878 | INFO     | ..............................
[2025-06-05 03:15:13] 2025-06-04 23:33:36,493 | INFO     | 
[2025-06-05 03:15:13] 2025-06-04 23:33:36,494 | INFO     | job summary report
[2025-06-05 03:15:13] 2025-06-04 23:33:36,494 | INFO     | --------------------------------------------------
[2025-06-05 03:15:13] 2025-06-04 23:33:36,494 | INFO     | PanDA job id: 6678312737
[2025-06-05 03:15:13] 2025-06-04 23:33:36,494 | INFO     | task id: 45006595
[2025-06-05 03:15:13] 2025-06-04 23:33:36,494 | INFO     | errors: (none)
[2025-06-05 03:15:13] 2025-06-04 23:33:36,494 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:15:13] 2025-06-04 23:33:36,494 | INFO     | pilot state: finished 
[2025-06-05 03:15:13] 2025-06-04 23:33:36,494 | INFO     | transexitcode: 0
[2025-06-05 03:15:13] 2025-06-04 23:33:36,494 | INFO     | exeerrorcode: 0
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | exeerrordiag: 
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | exitcode: 0
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | exitmsg: OK
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | cpuconsumptiontime: 50547 s
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | nevents: 400
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | neventsw: 0
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | pid: 23329
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | pgrp: 23329
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | corecount: 8
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | event service: False
[2025-06-05 03:15:13] 2025-06-04 23:33:36,495 | INFO     | sizes: {0: 2397171, 1: 2397370, 11: 2397576, 12: 2397604, 13319: 2427211, 13327: 2436152, 13330: 2436336, 13416: 2436506}
[2025-06-05 03:15:13] 2025-06-04 23:33:36,496 | INFO     | --------------------------------------------------
[2025-06-05 03:15:13] 2025-06-04 23:33:36,496 | INFO     | 
[2025-06-05 03:15:13] 2025-06-04 23:33:36,496 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-05 03:15:13] 2025-06-04 23:33:36,943 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,943 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,943 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,944 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,945 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:15:13] 2025-06-04 23:33:36,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,945 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:15:13] 2025-06-04 23:33:36,945 | INFO     | job 6678312737 has completed (purged errors)
[2025-06-05 03:15:13] 2025-06-04 23:33:36,946 | INFO     | overall cleanup function is called
[2025-06-05 03:15:13] 2025-06-04 23:33:37,954 | INFO     | --- collectZombieJob: --- 10, [23329]
[2025-06-05 03:15:13] 2025-06-04 23:33:37,955 | INFO     | zombie collector waiting for pid 23329
[2025-06-05 03:15:13] 2025-06-04 23:33:37,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:15:13] 2025-06-04 23:33:37,955 | INFO     | collected zombie processes
[2025-06-05 03:15:13] 2025-06-04 23:33:37,955 | INFO     | will attempt to kill all subprocesses of pid=23329
[2025-06-05 03:15:13] 2025-06-04 23:33:38,084 | INFO     | process IDs to be killed: [23329] (in reverse order)
[2025-06-05 03:15:13] 2025-06-04 23:33:38,724 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:15:13] 2025-06-04 23:33:38,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:15:13] 2025-06-04 23:33:38,728 | INFO     | did not find any defunct processes belonging to 23329
[2025-06-05 03:15:13] 2025-06-04 23:33:38,732 | INFO     | did not find any defunct processes belonging to 23329
[2025-06-05 03:15:13] 2025-06-04 23:33:38,732 | INFO     | ready for new job
[2025-06-05 03:15:13] 2025-06-04 23:33:38,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:15:13] 2025-06-04 23:33:38,734 | INFO     | **************************************
[2025-06-05 03:15:13] 2025-06-04 23:33:38,734 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:15:13] 2025-06-04 23:33:38,734 | INFO     | **************************************
[2025-06-05 03:15:13] 2025-06-04 23:33:38,735 | INFO     | 
[2025-06-05 03:15:13] 2025-06-04 23:33:38,735 | INFO     | pilot is running in a VM
[2025-06-05 03:15:13] 2025-06-04 23:33:38,735 | INFO     | architecture information:
[2025-06-05 03:15:13] 2025-06-04 23:33:38,748 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:15:13] 2025-06-04 23:33:39,021 | INFO     | cat /etc/os-release:
[2025-06-05 03:15:13] NAME="CentOS Linux"
[2025-06-05 03:15:13] VERSION="7 (Core)"
[2025-06-05 03:15:13] ID="centos"
[2025-06-05 03:15:13] ID_LIKE="rhel fedora"
[2025-06-05 03:15:13] VERSION_ID="7"
[2025-06-05 03:15:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:15:13] ANSI_COLOR="0;31"
[2025-06-05 03:15:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:15:13] HOME_URL="https://www.centos.org/"
[2025-06-05 03:15:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:15:13] 
[2025-06-05 03:15:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:15:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:15:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:15:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:15:13] 
[2025-06-05 03:15:13] 2025-06-04 23:33:39,021 | INFO     | **************************************
[2025-06-05 03:15:13] 2025-06-04 23:33:39,525 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-05 03:15:13] 2025-06-04 23:33:39,725 | INFO     | sufficient remaining disk space (497654169600 B)
[2025-06-05 03:15:13] 2025-06-04 23:33:39,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:15:13] 2025-06-04 23:33:39,726 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:15:13] 2025-06-04 23:33:39,726 | INFO     | update_server=False
[2025-06-05 03:15:13] 2025-06-04 23:33:39,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:15:13] 2025-06-04 23:33:39,726 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:15:13] 2025-06-04 23:33:39,727 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:15:13] 2025-06-04 23:33:39,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:15:13] 2025-06-04 23:33:39,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:15:13] 2025-06-04 23:33:39,779 | INFO     | all payload control threads have been joined
[2025-06-05 03:15:13] 2025-06-04 23:33:39,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:15:13] 2025-06-04 23:33:39,956 | INFO     | aborting loop
[2025-06-05 03:15:13] 2025-06-04 23:33:40,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:15:13] 2025-06-04 23:33:40,248 | INFO     | all job control threads have been joined
[2025-06-05 03:15:13] 2025-06-04 23:33:40,451 | INFO     | all data control threads have been joined
[2025-06-05 03:15:13] 2025-06-04 23:33:40,732 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:40,784 | INFO     | [payload] control thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:40,950 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:40,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:40,962 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:41,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:15:13] 2025-06-04 23:33:41,025 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:41,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:15:13] 2025-06-04 23:33:41,154 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:41,156 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:41,254 | INFO     | [job] control thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:41,415 | INFO     | [job] validate thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:41,457 | INFO     | [data] control thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:41,577 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:42,030 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:42,053 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:42,134 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:45,043 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:15:13] 2025-06-04 23:33:46,170 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140329247696704)>', '<ExcThread(monitor, started 140328585651968)>']
[2025-06-05 03:15:13] 2025-06-04 23:33:46,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:15:13] 2025-06-04 23:33:46,770 | INFO     | [monitor] control thread has ended
[2025-06-05 03:15:13] 2025-06-04 23:33:51,195 | INFO     | all workflow threads have been joined
[2025-06-05 03:15:13] 2025-06-04 23:33:51,196 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:15:13] 2025-06-04 23:33:51,196 | INFO     | traces error code: 0
[2025-06-05 03:15:13] 2025-06-04 23:33:51,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:15:13] 2025-06-04 23:33:51,561 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:15:13] 2025-06-04 23:33:51,681 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:15:13] 2025-06-04 23:33:51,809 [wrapper] pilotpid: 12996
[2025-06-05 03:15:13] 2025-06-04 23:33:51,906 [wrapper] Pilot exit status: 0
[2025-06-05 03:15:13] 2025-06-04 23:33:52,335 [wrapper] pandaids: 6678312737
[2025-06-05 03:15:13] 2025-06-04 23:33:53,108 [wrapper] cleanup supervisor_pilot  6486 12997
[2025-06-05 03:15:13] 2025-06-04 23:33:53,206 [wrapper] Test setup, not cleaning
[2025-06-05 03:15:13] 2025-06-04 23:33:53,294 [wrapper] apfmon messages muted
[2025-06-05 03:15:13] 2025-06-04 23:33:53,391 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:15:13] 2025-06-04 23:33:53,487 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:15:13]  *** Error codes and diagnostics ***
[2025-06-05 03:15:13]     "exeErrorCode": 0,
[2025-06-05 03:15:13]     "exeErrorDiag": "",
[2025-06-05 03:15:13]     "pilotErrorCode": 0,
[2025-06-05 03:15:13]     "pilotErrorDiag": "",
[2025-06-05 03:15:13]  *** Listing of results directory ***
[2025-06-05 03:15:13] total 388492
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-05 03:15:13] -rwx------. 1 boinc boinc     37140 Jun  4 06:16 runpilot2-wrapper.sh
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc      5111 Jun  4 06:16 queuedata.json
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc       100 Jun  4 21:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:15:13] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 21:48 run_atlas
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc       105 Jun  4 21:48 job.xml
[2025-06-05 03:15:13] -rw-r--r--. 2 boinc boinc 215159456 Jun  4 21:48 EVNT.45006593._002090.pool.root.1
[2025-06-05 03:15:13] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:48 start_atlas.sh
[2025-06-05 03:15:13] drwxrwx--x. 2 boinc boinc        68 Jun  4 21:48 shared
[2025-06-05 03:15:13] -rw-r--r--. 2 boinc boinc    508878 Jun  4 21:48 input.tar.gz
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc      6391 Jun  4 21:48 init_data.xml
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc         0 Jun  4 21:48 boinc_lockfile
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc      2525 Jun  4 21:49 pandaJob.out
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc    991007 Jun  4 21:49 agis_schedconf.cvmfs.json
[2025-06-05 03:15:13] drwx------. 4 boinc boinc      4096 Jun  4 21:49 pilot3
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc 175768715 Jun  5 01:30 HITS.45006595._052183.pool.root.1
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc       531 Jun  5 01:30 boinc_task_state.xml
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc      1030 Jun  5 01:31 memory_monitor_summary.json
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc   1598969 Jun  5 01:32 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc    371754 Jun  5 01:32 log.45006595._052183.job.log.tgz.1
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc        95 Jun  5 01:33 pilot_heartbeat.json
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc      7687 Jun  5 01:33 heartbeat.json
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc      4539 Jun  5 01:33 pilotlog.txt
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc   1162387 Jun  5 01:33 log.45006595._052183.job.log.1
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc       357 Jun  5 01:33 output.list
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc       620 Jun  5 01:33 runtime_log
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc   1556480 Jun  5 01:33 result.tar.gz
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc       656 Jun  5 01:33 yMuNDm2iug7n9Rq4apOajLDm4fhM0noT9bVof3QYDmugaKDmMGvgWm.diag
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc      8659 Jun  5 01:33 runtime_log.err
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc      8192 Jun  5 03:15 boinc_mmap_file
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc        28 Jun  5 03:15 wrapper_checkpoint.txt
[2025-06-05 03:15:13] -rw-r--r--. 1 boinc boinc     20471 Jun  5 03:15 stderr.txt
[2025-06-05 03:15:13] HITS file was successfully produced:
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc 175768715 Jun  5 01:30 shared/HITS.pool.root.1
[2025-06-05 03:15:13]  *** Contents of shared directory: ***
[2025-06-05 03:15:13] total 383808
[2025-06-05 03:15:13] -rw-r--r--. 2 boinc boinc 215159456 Jun  4 21:48 ATLAS.root_0
[2025-06-05 03:15:13] -rw-r--r--. 2 boinc boinc     15093 Jun  4 21:48 start_atlas.sh
[2025-06-05 03:15:13] -rw-r--r--. 2 boinc boinc    508878 Jun  4 21:48 input.tar.gz
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc 175768715 Jun  5 01:30 HITS.pool.root.1
[2025-06-05 03:15:13] -rw-------. 1 boinc boinc   1556480 Jun  5 01:33 result.tar.gz
03:15:15 (9075): run_atlas exited; CPU time 50721.516232
03:15:15 (9075): called boinc_finish(0)

</stderr_txt>
]]>

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