Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:23:22 (150866): wrapper (7.7.26015): starting
00:23:22 (150866): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 00:23:22] Arguments: --nthreads 4
[2025-06-06 00:23:22] Threads: 4
[2025-06-06 00:23:22] Checking for CVMFS
[2025-06-06 00:23:22] No cvmfs_config command found, will try listing directly
[2025-06-06 00:23:22] CVMFS is ok
[2025-06-06 00:23:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 00:23:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 00:23:22] Further information can be found at the LHC@home message board.
[2025-06-06 00:23:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:23:22] Checking for apptainer binary...
[2025-06-06 00:23:22] which: no apptainer in ((null))
[2025-06-06 00:23:22] apptainer is not installed, using version from CVMFS
[2025-06-06 00:23:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:23:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-06 00:23:22] apptainer works
[2025-06-06 00:23:22] Set ATHENA_PROC_NUMBER=4
[2025-06-06 00:23:22] Set ATHENA_CORE_NUMBER=4
[2025-06-06 00:23:22] Starting ATLAS job with PandaID=6678313303
[2025-06-06 00:23:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:05:24]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:05:24] 2025-06-06 00:59:27,637 | INFO     | executing command: lscpu
[2025-06-06 03:05:24] 2025-06-06 00:59:27,703 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 03:05:24] 2025-06-06 00:59:29,790 | WARNING  | process 175569 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 03:05:24] 2025-06-06 00:59:29,790 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6678313303/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:05:24] 2025-06-06 00:59:30,108 | INFO     | number of running child processes to parent process 175569: 1
[2025-06-06 03:05:24] 2025-06-06 00:59:30,109 | INFO     | maximum number of monitored processes: 6
[2025-06-06 03:05:24] 2025-06-06 00:59:31,880 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 03:05:24] 2025-06-06 00:59:31,880 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6678313303/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:05:24] 2025-06-06 00:59:31,881 | INFO     | extracted standard info from prmon json
[2025-06-06 03:05:24] 2025-06-06 00:59:31,881 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:05:24] 2025-06-06 00:59:31,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:05:24] 2025-06-06 00:59:31,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:05:24] 2025-06-06 00:59:31,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:05:24] 2025-06-06 00:59:31,884 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:05:24] 2025-06-06 00:59:31,885 | INFO     | sum of square deviations: 1110539892.0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,885 | INFO     | sum of deviations: 10866440204.000002
[2025-06-06 03:05:24] 2025-06-06 00:59:31,885 | INFO     | mean x: 1749166874.0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,886 | INFO     | mean y: 2328506.3267973857
[2025-06-06 03:05:24] 2025-06-06 00:59:31,886 | INFO     | -- intersect: -17112965937.448668
[2025-06-06 03:05:24] 2025-06-06 00:59:31,886 | INFO     | intersect: -17112965937.448668
[2025-06-06 03:05:24] 2025-06-06 00:59:31,886 | INFO     | chi2: 1.809349015355418
[2025-06-06 03:05:24] 2025-06-06 00:59:31,886 | INFO     | sum of square deviations: 1005179777.0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,887 | INFO     | sum of deviations: 10797258761.999983
[2025-06-06 03:05:24] 2025-06-06 00:59:31,887 | INFO     | mean x: 1749166721.5
[2025-06-06 03:05:24] 2025-06-06 00:59:31,887 | INFO     | mean y: 2328406.5405405406
[2025-06-06 03:05:24] 2025-06-06 00:59:31,887 | INFO     | -- intersect: -18786555076.851166
[2025-06-06 03:05:24] 2025-06-06 00:59:31,888 | INFO     | intersect: -18786555076.851166
[2025-06-06 03:05:24] 2025-06-06 00:59:31,888 | INFO     | chi2: 1.8116220177181168
[2025-06-06 03:05:24] 2025-06-06 00:59:31,888 | INFO     | current chi2=1.8116220177181168 (change=-0.1256254234759898 %)
[2025-06-06 03:05:24] 2025-06-06 00:59:31,888 | INFO     | right removable region: 147
[2025-06-06 03:05:24] 2025-06-06 00:59:31,888 | INFO     | sum of square deviations: 1005179777.0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,889 | INFO     | sum of deviations: -15457460420.499998
[2025-06-06 03:05:24] 2025-06-06 00:59:31,889 | INFO     | mean x: 1749167026.5
[2025-06-06 03:05:24] 2025-06-06 00:59:31,889 | INFO     | mean y: 2366175.885135135
[2025-06-06 03:05:24] 2025-06-06 00:59:31,889 | INFO     | -- intersect: 26900718788.651062
[2025-06-06 03:05:24] 2025-06-06 00:59:31,889 | INFO     | intersect: 26900718788.651062
[2025-06-06 03:05:24] 2025-06-06 00:59:31,890 | INFO     | chi2: 0.03954252394657045
[2025-06-06 03:05:24] 2025-06-06 00:59:31,890 | INFO     | current chi2=0.03954252394657045 (change=97.81454414759206 %)
[2025-06-06 03:05:24] 2025-06-06 00:59:31,890 | INFO     | sum of square deviations: 906703512.0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,891 | INFO     | sum of deviations: -15058429866.000002
[2025-06-06 03:05:24] 2025-06-06 00:59:31,891 | INFO     | mean x: 1749167179.0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,891 | INFO     | mean y: 2365526.027972028
[2025-06-06 03:05:24] 2025-06-06 00:59:31,891 | INFO     | -- intersect: 29052337143.299675
[2025-06-06 03:05:24] 2025-06-06 00:59:31,891 | INFO     | intersect: 29052337143.299675
[2025-06-06 03:05:24] 2025-06-06 00:59:31,891 | INFO     | chi2: 0.03424224414167303
[2025-06-06 03:05:24] 2025-06-06 00:59:31,891 | INFO     | current chi2=0.03424224414167303 (change=13.403999734713734 %)
[2025-06-06 03:05:24] 2025-06-06 00:59:31,892 | INFO     | left removable region: 20
[2025-06-06 03:05:24] 2025-06-06 00:59:31,892 | INFO     | sum of square deviations: 635130048.0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,892 | INFO     | sum of deviations: -11349222386.0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,892 | INFO     | mean x: 1749167301.0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,893 | INFO     | mean y: 2361695.527559055
[2025-06-06 03:05:24] 2025-06-06 00:59:31,893 | INFO     | -- intersect: 31258462319.140945
[2025-06-06 03:05:24] 2025-06-06 00:59:31,893 | INFO     | intersect: 31258462319.140945
[2025-06-06 03:05:24] 2025-06-06 00:59:31,893 | INFO     | chi2: 0.032527113420508194
[2025-06-06 03:05:24] 2025-06-06 00:59:31,893 | INFO     | -- intersect: 31258462319.140945
[2025-06-06 03:05:24] 2025-06-06 00:59:31,893 | INFO     | current memory leak: -17.87 B/s (using 127 data points, chi2=0.03)
[2025-06-06 03:05:24] 2025-06-06 00:59:31,894 | INFO     | ..............................
[2025-06-06 03:05:24] 2025-06-06 00:59:31,894 | INFO     | . Timing measurements:
[2025-06-06 03:05:24] 2025-06-06 00:59:31,894 | INFO     | . get job = 0 s
[2025-06-06 03:05:24] 2025-06-06 00:59:31,894 | INFO     | . initial setup = 1 s
[2025-06-06 03:05:24] 2025-06-06 00:59:31,894 | INFO     | . payload setup = 6 s
[2025-06-06 03:05:24] 2025-06-06 00:59:31,894 | INFO     | . stage-in = 0 s
[2025-06-06 03:05:24] 2025-06-06 00:59:31,894 | INFO     | . payload execution = 9326 s
[2025-06-06 03:05:24] 2025-06-06 00:59:31,894 | INFO     | . stage-out = 0 s
[2025-06-06 03:05:24] 2025-06-06 00:59:31,894 | INFO     | . log creation = 0 s
[2025-06-06 03:05:24] 2025-06-06 00:59:31,895 | INFO     | ..............................
[2025-06-06 03:05:24] 2025-06-06 00:59:31,988 | INFO     | 
[2025-06-06 03:05:24] 2025-06-06 00:59:31,988 | INFO     | job summary report
[2025-06-06 03:05:24] 2025-06-06 00:59:31,988 | INFO     | --------------------------------------------------
[2025-06-06 03:05:24] 2025-06-06 00:59:31,988 | INFO     | PanDA job id: 6678313303
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | task id: 45006595
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | errors: (none)
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | pilot state: finished 
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | transexitcode: 0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | exeerrorcode: 0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | exeerrordiag: 
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | exitcode: 0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | exitmsg: OK
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | cpuconsumptiontime: 35901 s
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | nevents: 400
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | neventsw: 0
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | pid: 175569
[2025-06-06 03:05:24] 2025-06-06 00:59:31,989 | INFO     | pgrp: 175569
[2025-06-06 03:05:24] 2025-06-06 00:59:31,990 | INFO     | corecount: 4
[2025-06-06 03:05:24] 2025-06-06 00:59:31,990 | INFO     | event service: False
[2025-06-06 03:05:24] 2025-06-06 00:59:31,990 | INFO     | sizes: {0: 2397239, 1: 2397381, 5: 2397587, 11: 2397643, 9337: 2425875, 9339: 2434838, 9341: 2435022, 9345: 2435192}
[2025-06-06 03:05:24] 2025-06-06 00:59:31,990 | INFO     | --------------------------------------------------
[2025-06-06 03:05:24] 2025-06-06 00:59:31,990 | INFO     | 
[2025-06-06 03:05:24] 2025-06-06 00:59:31,990 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-06 03:05:24] 2025-06-06 00:59:32,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:05:24] 2025-06-06 00:59:32,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,013 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:05:24] 2025-06-06 00:59:32,013 | INFO     | job 6678313303 has completed (purged errors)
[2025-06-06 03:05:24] 2025-06-06 00:59:32,013 | INFO     | overall cleanup function is called
[2025-06-06 03:05:24] 2025-06-06 00:59:33,021 | INFO     | --- collectZombieJob: --- 10, [175569]
[2025-06-06 03:05:24] 2025-06-06 00:59:33,021 | INFO     | zombie collector waiting for pid 175569
[2025-06-06 03:05:24] 2025-06-06 00:59:33,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:05:24] 2025-06-06 00:59:33,021 | INFO     | collected zombie processes
[2025-06-06 03:05:24] 2025-06-06 00:59:33,021 | INFO     | will attempt to kill all subprocesses of pid=175569
[2025-06-06 03:05:24] 2025-06-06 00:59:33,322 | INFO     | process IDs to be killed: [175569] (in reverse order)
[2025-06-06 03:05:24] 2025-06-06 00:59:33,429 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:05:24] 2025-06-06 00:59:33,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:05:24] 2025-06-06 00:59:33,442 | INFO     | did not find any defunct processes belonging to 175569
[2025-06-06 03:05:24] 2025-06-06 00:59:33,452 | INFO     | did not find any defunct processes belonging to 175569
[2025-06-06 03:05:24] 2025-06-06 00:59:33,453 | INFO     | ready for new job
[2025-06-06 03:05:24] 2025-06-06 00:59:33,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:05:24] 2025-06-06 00:59:33,455 | INFO     | **************************************
[2025-06-06 03:05:24] 2025-06-06 00:59:33,455 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:05:24] 2025-06-06 00:59:33,455 | INFO     | **************************************
[2025-06-06 03:05:24] 2025-06-06 00:59:33,455 | INFO     | 
[2025-06-06 03:05:24] 2025-06-06 00:59:33,459 | INFO     | architecture information:
[2025-06-06 03:05:24] 2025-06-06 00:59:33,459 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:05:24] 2025-06-06 00:59:33,475 | INFO     | cat /etc/os-release:
[2025-06-06 03:05:24] NAME="CentOS Linux"
[2025-06-06 03:05:24] VERSION="7 (Core)"
[2025-06-06 03:05:24] ID="centos"
[2025-06-06 03:05:24] ID_LIKE="rhel fedora"
[2025-06-06 03:05:24] VERSION_ID="7"
[2025-06-06 03:05:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:05:24] ANSI_COLOR="0;31"
[2025-06-06 03:05:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:05:24] HOME_URL="https://www.centos.org/"
[2025-06-06 03:05:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:05:24] 
[2025-06-06 03:05:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:05:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:05:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:05:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:05:24] 
[2025-06-06 03:05:24] 2025-06-06 00:59:33,476 | INFO     | **************************************
[2025-06-06 03:05:24] 2025-06-06 00:59:33,979 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-06 03:05:24] 2025-06-06 00:59:33,996 | INFO     | sufficient remaining disk space (632781012992 B)
[2025-06-06 03:05:24] 2025-06-06 00:59:33,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:05:24] 2025-06-06 00:59:33,997 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:05:24] 2025-06-06 00:59:33,997 | INFO     | update_server=False
[2025-06-06 03:05:24] 2025-06-06 00:59:33,997 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:05:24] 2025-06-06 00:59:33,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:05:24] 2025-06-06 00:59:33,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:05:24] 2025-06-06 00:59:33,998 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 03:05:24] 2025-06-06 00:59:33,998 | INFO     | aborting loop
[2025-06-06 03:05:24] 2025-06-06 00:59:33,998 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:05:24] 2025-06-06 00:59:33,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:05:24] 2025-06-06 00:59:33,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:05:24] 2025-06-06 00:59:34,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:05:24] 2025-06-06 00:59:34,237 | INFO     | all payload control threads have been joined
[2025-06-06 03:05:24] 2025-06-06 00:59:34,292 | INFO     | all data control threads have been joined
[2025-06-06 03:05:24] 2025-06-06 00:59:35,002 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:35,004 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:35,243 | INFO     | [payload] control thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:35,298 | INFO     | [data] control thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:35,323 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:35,401 | INFO     | [job] validate thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:35,503 | INFO     | all job control threads have been joined
[2025-06-06 03:05:24] 2025-06-06 00:59:35,730 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:35,765 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:36,076 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:36,182 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:36,183 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:36,225 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:36,508 | INFO     | [job] control thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:36,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:05:24] 2025-06-06 00:59:38,002 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:38,003 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:44,448 | INFO     | job.realtimelogging is not enabled
[2025-06-06 03:05:24] 2025-06-06 00:59:45,453 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:05:24] 2025-06-06 00:59:46,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22856851425088)>', '<ExcThread(monitor, started 22855997703936)>']
[2025-06-06 03:05:24] 2025-06-06 00:59:46,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:05:24] 2025-06-06 00:59:46,059 | INFO     | [monitor] control thread has ended
[2025-06-06 03:05:24] 2025-06-06 00:59:51,075 | INFO     | all workflow threads have been joined
[2025-06-06 03:05:24] 2025-06-06 00:59:51,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:05:24] 2025-06-06 00:59:51,075 | INFO     | traces error code: 0
[2025-06-06 03:05:24] 2025-06-06 00:59:51,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:05:24] 2025-06-06 00:59:51,216 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:05:24] 2025-06-06 00:59:51,219 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:05:24] 2025-06-06 00:59:51,221 [wrapper] pilotpid: 156567
[2025-06-06 03:05:24] 2025-06-06 00:59:51,224 [wrapper] Pilot exit status: 0
[2025-06-06 03:05:24] 2025-06-06 00:59:51,233 [wrapper] pandaids: 6678313303
[2025-06-06 03:05:24] 2025-06-06 00:59:51,301 [wrapper] cleanup supervisor_pilot  365110 156568
[2025-06-06 03:05:24] 2025-06-06 00:59:51,304 [wrapper] Test setup, not cleaning
[2025-06-06 03:05:24] 2025-06-06 00:59:51,307 [wrapper] apfmon messages muted
[2025-06-06 03:05:24] 2025-06-06 00:59:51,310 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:05:24] 2025-06-06 00:59:51,313 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:05:24]  *** Error codes and diagnostics ***
[2025-06-06 03:05:24]     "exeErrorCode": 0,
[2025-06-06 03:05:24]     "exeErrorDiag": "",
[2025-06-06 03:05:24]     "pilotErrorCode": 0,
[2025-06-06 03:05:24]     "pilotErrorDiag": "",
[2025-06-06 03:05:24]  *** Listing of results directory ***
[2025-06-06 03:05:24] total 391308
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:20 queuedata.json
[2025-06-06 03:05:24] -rwx------ 1 boinc boinc     37140 Jun  4 06:21 runpilot2-wrapper.sh
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc       100 Jun  6 00:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:05:24] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 00:23 run_atlas
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc       105 Jun  6 00:23 job.xml
[2025-06-06 03:05:24] -rw-r--r-- 2 boinc boinc 216763449 Jun  6 00:23 EVNT.45006593._002098.pool.root.1
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc      6636 Jun  6 00:23 init_data.xml
[2025-06-06 03:05:24] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:23 start_atlas.sh
[2025-06-06 03:05:24] drwxrwx--x 2 boinc boinc      4096 Jun  6 00:23 shared
[2025-06-06 03:05:24] -rw-r--r-- 2 boinc boinc    508883 Jun  6 00:23 input.tar.gz
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc         0 Jun  6 00:23 boinc_lockfile
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc      2525 Jun  6 00:23 pandaJob.out
[2025-06-06 03:05:24] -rw------- 1 boinc boinc    987721 Jun  6 00:23 agis_schedconf.cvmfs.json
[2025-06-06 03:05:24] -rw------- 1 boinc boinc   1598969 Jun  6 00:23 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:05:24] drwx------ 4 boinc boinc      4096 Jun  6 00:23 pilot3
[2025-06-06 03:05:24] -rw------- 1 boinc boinc 177726630 Jun  6 02:58 HITS.45006595._052397.pool.root.1
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc       528 Jun  6 02:58 boinc_task_state.xml
[2025-06-06 03:05:24] -rw------- 1 boinc boinc        95 Jun  6 02:59 pilot_heartbeat.json
[2025-06-06 03:05:24] -rw------- 1 boinc boinc      1031 Jun  6 02:59 memory_monitor_summary.json
[2025-06-06 03:05:24] -rw------- 1 boinc boinc    299624 Jun  6 02:59 log.45006595._052397.job.log.tgz.1
[2025-06-06 03:05:24] -rw------- 1 boinc boinc      7723 Jun  6 02:59 heartbeat.json
[2025-06-06 03:05:24] -rw------- 1 boinc boinc      4558 Jun  6 02:59 pilotlog.txt
[2025-06-06 03:05:24] -rw------- 1 boinc boinc    886330 Jun  6 02:59 log.45006595._052397.job.log.1
[2025-06-06 03:05:24] -rw------- 1 boinc boinc       357 Jun  6 02:59 output.list
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc       620 Jun  6 02:59 runtime_log
[2025-06-06 03:05:24] -rw------- 1 boinc boinc   1208320 Jun  6 02:59 result.tar.gz
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc      9025 Jun  6 02:59 runtime_log.err
[2025-06-06 03:05:24] -rw------- 1 boinc boinc       662 Jun  6 02:59 4W6KDmknug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkCnKDm3nUmJo.diag
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc        26 Jun  6 03:05 wrapper_checkpoint.txt
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc      8192 Jun  6 03:05 boinc_mmap_file
[2025-06-06 03:05:24] -rw-r--r-- 1 boinc boinc     20938 Jun  6 03:05 stderr.txt
[2025-06-06 03:05:24] HITS file was successfully produced:
[2025-06-06 03:05:24] -rw------- 1 boinc boinc 177726630 Jun  6 02:58 shared/HITS.pool.root.1
[2025-06-06 03:05:24]  *** Contents of shared directory: ***
[2025-06-06 03:05:24] total 386948
[2025-06-06 03:05:24] -rw-r--r-- 2 boinc boinc 216763449 Jun  6 00:23 ATLAS.root_0
[2025-06-06 03:05:24] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:23 start_atlas.sh
[2025-06-06 03:05:24] -rw-r--r-- 2 boinc boinc    508883 Jun  6 00:23 input.tar.gz
[2025-06-06 03:05:24] -rw------- 1 boinc boinc 177726630 Jun  6 02:58 HITS.pool.root.1
[2025-06-06 03:05:24] -rw------- 1 boinc boinc   1208320 Jun  6 02:59 result.tar.gz
03:05:26 (150866): run_atlas exited; CPU time 36269.281498
03:05:26 (150866): called boinc_finish(0)

</stderr_txt>
]]>

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