Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:33:08 (6987): wrapper (7.7.26015): starting
19:33:08 (6987): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 19:33:08] Arguments: --nthreads 8
[2025-06-04 19:33:08] Threads: 8
[2025-06-04 19:33:08] Checking for CVMFS
[2025-06-04 19:33:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 19:33:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 19:33:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 19:33:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 19:33:09] 2.11.2.0 31392 33525 95996 146789 3 59 15381223 25165825 4297 130560 0 17976330 99.765 20663771 2062 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 19:33:09] CVMFS is ok
[2025-06-04 19:33:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 19:33:09] Checking for apptainer binary...
[2025-06-04 19:33:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 19:33:09] Running /usr/bin/apptainer --version
[2025-06-04 19:33:09] apptainer version 1.3.2-1.el7
[2025-06-04 19:33:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 19:33:19] cg-vwn267.simple-grid.lan
[2025-06-04 19:33:19] apptainer works
[2025-06-04 19:33:19] Set ATHENA_PROC_NUMBER=8
[2025-06-04 19:33:19] Set ATHENA_CORE_NUMBER=8
[2025-06-04 19:33:19] Starting ATLAS job with PandaID=6678244396
[2025-06-04 19:33:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:25:02]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:25:02] 2025-06-04 21:24:46,965 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6678244396/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:25:02] 2025-06-04 21:24:46,965 | INFO     | extracted standard info from prmon json
[2025-06-04 23:25:02] 2025-06-04 21:24:46,966 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:25:02] 2025-06-04 21:24:46,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:25:02] 2025-06-04 21:24:46,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:25:02] 2025-06-04 21:24:46,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:25:02] 2025-06-04 21:24:46,971 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:25:02] 2025-06-04 21:24:46,972 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 23:25:02] 2025-06-04 21:24:46,974 | INFO     | sum of deviations: 74139968306.5
[2025-06-04 23:25:02] 2025-06-04 21:24:46,975 | INFO     | mean x: 1749065706.5
[2025-06-04 23:25:02] 2025-06-04 21:24:46,975 | INFO     | mean y: 2415673.236111111
[2025-06-04 23:25:02] 2025-06-04 21:24:46,975 | INFO     | -- intersect: -41495678500.00967
[2025-06-04 23:25:02] 2025-06-04 21:24:46,975 | INFO     | intersect: -41495678500.00967
[2025-06-04 23:25:02] 2025-06-04 21:24:46,975 | INFO     | chi2: 6.405498937796641
[2025-06-04 23:25:02] 2025-06-04 21:24:46,976 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 23:25:02] 2025-06-04 21:24:46,978 | INFO     | sum of deviations: 86850441469.00005
[2025-06-04 23:25:02] 2025-06-04 21:24:46,978 | INFO     | mean x: 1749065554.0
[2025-06-04 23:25:02] 2025-06-04 21:24:46,978 | INFO     | mean y: 2424614.786729858
[2025-06-04 23:25:02] 2025-06-04 21:24:46,978 | INFO     | -- intersect: -52148508359.67933
[2025-06-04 23:25:02] 2025-06-04 21:24:46,978 | INFO     | intersect: -52148508359.67933
[2025-06-04 23:25:02] 2025-06-04 21:24:46,979 | INFO     | chi2: 5.627943580561336
[2025-06-04 23:25:02] 2025-06-04 21:24:46,979 | INFO     | current chi2=5.627943580561336 (change=12.138872627816996 %)
[2025-06-04 23:25:02] 2025-06-04 21:24:46,980 | INFO     | right removable region: 210
[2025-06-04 23:25:02] 2025-06-04 21:24:46,980 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 23:25:02] 2025-06-04 21:24:46,982 | INFO     | sum of deviations: 959816944.0000038
[2025-06-04 23:25:02] 2025-06-04 21:24:46,983 | INFO     | mean x: 1749065859.0
[2025-06-04 23:25:02] 2025-06-04 21:24:46,983 | INFO     | mean y: 2468253.0900473935
[2025-06-04 23:25:02] 2025-06-04 21:24:46,983 | INFO     | -- intersect: -573871452.2269442
[2025-06-04 23:25:02] 2025-06-04 21:24:46,983 | INFO     | intersect: -573871452.2269442
[2025-06-04 23:25:02] 2025-06-04 21:24:46,983 | INFO     | chi2: 1.729845935757806
[2025-06-04 23:25:02] 2025-06-04 21:24:46,984 | INFO     | current chi2=1.729845935757806 (change=72.99436074291448 %)
[2025-06-04 23:25:02] 2025-06-04 21:24:46,984 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 23:25:02] 2025-06-04 21:24:46,986 | INFO     | sum of deviations: -24139963313.5
[2025-06-04 23:25:02] 2025-06-04 21:24:46,986 | INFO     | mean x: 1749066011.5
[2025-06-04 23:25:02] 2025-06-04 21:24:46,986 | INFO     | mean y: 2487013.0533980583
[2025-06-04 23:25:02] 2025-06-04 21:24:46,986 | INFO     | -- intersect: 15579097336.337795
[2025-06-04 23:25:02] 2025-06-04 21:24:46,987 | INFO     | intersect: 15579097336.337795
[2025-06-04 23:25:02] 2025-06-04 21:24:46,987 | INFO     | chi2: 0.9591491428538089
[2025-06-04 23:25:02] 2025-06-04 21:24:46,987 | INFO     | current chi2=0.9591491428538089 (change=44.552915203189606 %)
[2025-06-04 23:25:02] 2025-06-04 21:24:46,988 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 23:25:02] 2025-06-04 21:24:46,989 | INFO     | sum of deviations: -19402485025.0
[2025-06-04 23:25:02] 2025-06-04 21:24:46,989 | INFO     | mean x: 1749066164.0
[2025-06-04 23:25:02] 2025-06-04 21:24:46,989 | INFO     | mean y: 2483231.850746269
[2025-06-04 23:25:02] 2025-06-04 21:24:46,990 | INFO     | -- intersect: 13479933835.714436
[2025-06-04 23:25:02] 2025-06-04 21:24:46,990 | INFO     | intersect: 13479933835.714436
[2025-06-04 23:25:02] 2025-06-04 21:24:46,990 | INFO     | chi2: 0.9382388101585342
[2025-06-04 23:25:02] 2025-06-04 21:24:46,990 | INFO     | current chi2=0.9382388101585342 (change=2.180091891971993 %)
[2025-06-04 23:25:02] 2025-06-04 21:24:46,990 | INFO     | left removable region: 30
[2025-06-04 23:25:02] 2025-06-04 21:24:46,991 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 23:25:02] 2025-06-04 21:24:46,992 | INFO     | sum of deviations: 4490812802.000003
[2025-06-04 23:25:02] 2025-06-04 21:24:46,992 | INFO     | mean x: 1749066438.5
[2025-06-04 23:25:02] 2025-06-04 21:24:46,992 | INFO     | mean y: 2485644.511111111
[2025-06-04 23:25:02] 2025-06-04 21:24:46,992 | INFO     | -- intersect: -4341103345.45233
[2025-06-04 23:25:02] 2025-06-04 21:24:46,992 | INFO     | intersect: -4341103345.45233
[2025-06-04 23:25:02] 2025-06-04 21:24:46,993 | INFO     | chi2: 0.0004910168602135867
[2025-06-04 23:25:02] 2025-06-04 21:24:46,993 | INFO     | -- intersect: -4341103345.45233
[2025-06-04 23:25:02] 2025-06-04 21:24:46,993 | INFO     | current memory leak: 2.48 B/s (using 180 data points, chi2=0.00)
[2025-06-04 23:25:02] 2025-06-04 21:24:46,994 | INFO     | ..............................
[2025-06-04 23:25:02] 2025-06-04 21:24:46,994 | INFO     | . Timing measurements:
[2025-06-04 23:25:02] 2025-06-04 21:24:46,994 | INFO     | . get job = 0 s
[2025-06-04 23:25:02] 2025-06-04 21:24:46,994 | INFO     | . initial setup = 10 s
[2025-06-04 23:25:02] 2025-06-04 21:24:46,995 | INFO     | . payload setup = 191 s
[2025-06-04 23:25:02] 2025-06-04 21:24:46,995 | INFO     | . stage-in = 0 s
[2025-06-04 23:25:02] 2025-06-04 21:24:46,995 | INFO     | . payload execution = 13269 s
[2025-06-04 23:25:02] 2025-06-04 21:24:46,995 | INFO     | . stage-out = 1 s
[2025-06-04 23:25:02] 2025-06-04 21:24:46,995 | INFO     | . log creation = 0 s
[2025-06-04 23:25:02] 2025-06-04 21:24:46,995 | INFO     | ..............................
[2025-06-04 23:25:02] 2025-06-04 21:24:47,132 | INFO     | 
[2025-06-04 23:25:02] 2025-06-04 21:24:47,132 | INFO     | job summary report
[2025-06-04 23:25:02] 2025-06-04 21:24:47,132 | INFO     | --------------------------------------------------
[2025-06-04 23:25:02] 2025-06-04 21:24:47,132 | INFO     | PanDA job id: 6678244396
[2025-06-04 23:25:02] 2025-06-04 21:24:47,132 | INFO     | task id: 45006595
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | errors: (none)
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | pilot state: finished 
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | transexitcode: 0
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | exeerrorcode: 0
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | exeerrordiag: 
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | exitcode: 0
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | exitmsg: OK
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | cpuconsumptiontime: 49606 s
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | nevents: 400
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | neventsw: 0
[2025-06-04 23:25:02] 2025-06-04 21:24:47,133 | INFO     | pid: 23101
[2025-06-04 23:25:02] 2025-06-04 21:24:47,134 | INFO     | pgrp: 23101
[2025-06-04 23:25:02] 2025-06-04 21:24:47,134 | INFO     | corecount: 8
[2025-06-04 23:25:02] 2025-06-04 21:24:47,134 | INFO     | event service: False
[2025-06-04 23:25:02] 2025-06-04 21:24:47,134 | INFO     | sizes: {0: 2397115, 1: 2397370, 2: 2397370, 12: 2397398, 23: 2397426, 34: 2397454, 45: 2397610, 55: 2397638, 66: 2397666, 77: 2397694, 88: 2397750, 90: 2398264, 98
[2025-06-04 23:25:02] 2025-06-04 21:24:47,134 | INFO     | --------------------------------------------------
[2025-06-04 23:25:02] 2025-06-04 21:24:47,134 | INFO     | 
[2025-06-04 23:25:02] 2025-06-04 21:24:47,134 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 23:25:02] 2025-06-04 21:24:47,213 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,213 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,214 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,214 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,214 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,214 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,215 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:25:02] 2025-06-04 21:24:47,215 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,215 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:25:02] 2025-06-04 21:24:47,215 | INFO     | job 6678244396 has completed (purged errors)
[2025-06-04 23:25:02] 2025-06-04 21:24:47,216 | INFO     | overall cleanup function is called
[2025-06-04 23:25:02] 2025-06-04 21:24:48,224 | INFO     | --- collectZombieJob: --- 10, [23101]
[2025-06-04 23:25:02] 2025-06-04 21:24:48,224 | INFO     | zombie collector waiting for pid 23101
[2025-06-04 23:25:02] 2025-06-04 21:24:48,224 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:25:02] 2025-06-04 21:24:48,224 | INFO     | collected zombie processes
[2025-06-04 23:25:02] 2025-06-04 21:24:48,225 | INFO     | will attempt to kill all subprocesses of pid=23101
[2025-06-04 23:25:02] 2025-06-04 21:24:48,341 | INFO     | process IDs to be killed: [23101] (in reverse order)
[2025-06-04 23:25:02] 2025-06-04 21:24:48,416 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:25:02] 2025-06-04 21:24:48,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:25:02] 2025-06-04 21:24:48,420 | INFO     | did not find any defunct processes belonging to 23101
[2025-06-04 23:25:02] 2025-06-04 21:24:48,423 | INFO     | did not find any defunct processes belonging to 23101
[2025-06-04 23:25:02] 2025-06-04 21:24:48,424 | INFO     | ready for new job
[2025-06-04 23:25:02] 2025-06-04 21:24:48,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:25:02] 2025-06-04 21:24:48,425 | INFO     | **************************************
[2025-06-04 23:25:02] 2025-06-04 21:24:48,425 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:25:02] 2025-06-04 21:24:48,426 | INFO     | **************************************
[2025-06-04 23:25:02] 2025-06-04 21:24:48,426 | INFO     | 
[2025-06-04 23:25:02] 2025-06-04 21:24:48,426 | INFO     | pilot is running in a VM
[2025-06-04 23:25:02] 2025-06-04 21:24:48,426 | INFO     | architecture information:
[2025-06-04 23:25:02] 2025-06-04 21:24:48,427 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:25:02] 2025-06-04 21:24:48,449 | INFO     | cat /etc/os-release:
[2025-06-04 23:25:02] NAME="CentOS Linux"
[2025-06-04 23:25:02] VERSION="7 (Core)"
[2025-06-04 23:25:02] ID="centos"
[2025-06-04 23:25:02] ID_LIKE="rhel fedora"
[2025-06-04 23:25:02] VERSION_ID="7"
[2025-06-04 23:25:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:25:02] ANSI_COLOR="0;31"
[2025-06-04 23:25:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:25:02] HOME_URL="https://www.centos.org/"
[2025-06-04 23:25:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:25:02] 
[2025-06-04 23:25:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:25:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:25:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:25:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:25:02] 
[2025-06-04 23:25:02] 2025-06-04 21:24:48,450 | INFO     | **************************************
[2025-06-04 23:25:02] 2025-06-04 21:24:48,953 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 23:25:02] 2025-06-04 21:24:48,992 | INFO     | sufficient remaining disk space (496626565120 B)
[2025-06-04 23:25:02] 2025-06-04 21:24:48,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:25:02] 2025-06-04 21:24:48,992 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:25:02] 2025-06-04 21:24:48,993 | INFO     | update_server=False
[2025-06-04 23:25:02] 2025-06-04 21:24:48,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:25:02] 2025-06-04 21:24:48,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:25:02] 2025-06-04 21:24:48,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:25:02] 2025-06-04 21:24:48,994 | INFO     | aborting loop
[2025-06-04 23:25:02] 2025-06-04 21:24:48,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:25:02] 2025-06-04 21:24:49,101 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:25:02] 2025-06-04 21:24:49,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:25:02] 2025-06-04 21:24:49,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:25:02] 2025-06-04 21:24:49,323 | INFO     | all job control threads have been joined
[2025-06-04 23:25:02] 2025-06-04 21:24:49,999 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,000 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,000 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,006 | INFO     | all data control threads have been joined
[2025-06-04 23:25:02] 2025-06-04 21:24:50,162 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,280 | INFO     | all payload control threads have been joined
[2025-06-04 23:25:02] 2025-06-04 21:24:50,322 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,329 | INFO     | [job] control thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,441 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,520 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,596 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,863 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,875 | INFO     | [job] validate thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:50,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:51,002 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:51,012 | INFO     | [data] control thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:51,286 | INFO     | [payload] control thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:52,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:25:02] 2025-06-04 21:24:56,138 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:25:02] 2025-06-04 21:24:56,987 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140366699083584)>', '<ExcThread(monitor, started 140365956896512)>']
[2025-06-04 23:25:02] 2025-06-04 21:24:57,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:25:02] 2025-06-04 21:24:57,152 | INFO     | [monitor] control thread has ended
[2025-06-04 23:25:02] 2025-06-04 21:25:02,012 | INFO     | all workflow threads have been joined
[2025-06-04 23:25:02] 2025-06-04 21:25:02,013 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:25:02] 2025-06-04 21:25:02,013 | INFO     | traces error code: 0
[2025-06-04 23:25:02] 2025-06-04 21:25:02,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:25:02] 2025-06-04 21:25:02,221 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:25:02] 2025-06-04 21:25:02,279 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:25:02] 2025-06-04 21:25:02,324 [wrapper] pilotpid: 12482
[2025-06-04 23:25:02] 2025-06-04 21:25:02,356 [wrapper] Pilot exit status: 0
[2025-06-04 23:25:02] 2025-06-04 21:25:02,421 [wrapper] pandaids: 6678244396
[2025-06-04 23:25:02] 2025-06-04 21:25:02,480 [wrapper] cleanup supervisor_pilot  5955 12483
[2025-06-04 23:25:02] 2025-06-04 21:25:02,496 [wrapper] Test setup, not cleaning
[2025-06-04 23:25:02] 2025-06-04 21:25:02,509 [wrapper] apfmon messages muted
[2025-06-04 23:25:02] 2025-06-04 21:25:02,522 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:25:02] 2025-06-04 21:25:02,537 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:25:02]  *** Error codes and diagnostics ***
[2025-06-04 23:25:02]     "exeErrorCode": 0,
[2025-06-04 23:25:02]     "exeErrorDiag": "",
[2025-06-04 23:25:02]     "pilotErrorCode": 0,
[2025-06-04 23:25:02]     "pilotErrorDiag": "",
[2025-06-04 23:25:02]  *** Listing of results directory ***
[2025-06-04 23:25:02] total 391196
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:51 queuedata.json
[2025-06-04 23:25:02] -rwx------. 1 boinc boinc     37140 Jun  4 02:51 runpilot2-wrapper.sh
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc       100 Jun  4 19:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:25:02] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 19:33 run_atlas
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc       105 Jun  4 19:33 job.xml
[2025-06-04 23:25:02] -rw-r--r--. 2 boinc boinc 216723016 Jun  4 19:33 EVNT.45006593._001981.pool.root.1
[2025-06-04 23:25:02] -rw-r--r--. 2 boinc boinc     15093 Jun  4 19:33 start_atlas.sh
[2025-06-04 23:25:02] drwxrwx--x. 2 boinc boinc        68 Jun  4 19:33 shared
[2025-06-04 23:25:02] -rw-r--r--. 2 boinc boinc    508884 Jun  4 19:33 input.tar.gz
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc      6391 Jun  4 19:33 init_data.xml
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc         0 Jun  4 19:33 boinc_lockfile
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc      2525 Jun  4 19:33 pandaJob.out
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc    990984 Jun  4 19:36 agis_schedconf.cvmfs.json
[2025-06-04 23:25:02] drwx------. 4 boinc boinc      4096 Jun  4 19:36 pilot3
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc 176965905 Jun  4 23:23 HITS.45006595._049401.pool.root.1
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc        95 Jun  4 23:24 pilot_heartbeat.json
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc       531 Jun  4 23:24 boinc_task_state.xml
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc      1019 Jun  4 23:24 memory_monitor_summary.json
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc      8192 Jun  4 23:24 boinc_mmap_file
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc        28 Jun  4 23:24 wrapper_checkpoint.txt
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc   1598969 Jun  4 23:24 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc    371867 Jun  4 23:24 log.45006595._049401.job.log.tgz.1
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc      7689 Jun  4 23:24 heartbeat.json
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc      4416 Jun  4 23:25 pilotlog.txt
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc   1165387 Jun  4 23:25 log.45006595._049401.job.log.1
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc       357 Jun  4 23:25 output.list
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc       620 Jun  4 23:25 runtime_log
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc   1556480 Jun  4 23:25 result.tar.gz
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc      8659 Jun  4 23:25 runtime_log.err
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc       656 Jun  4 23:25 1iYMDmSXrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUQaKDmGwFXBn.diag
[2025-06-04 23:25:02] -rw-r--r--. 1 boinc boinc     20520 Jun  4 23:25 stderr.txt
[2025-06-04 23:25:02] HITS file was successfully produced:
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc 176965905 Jun  4 23:23 shared/HITS.pool.root.1
[2025-06-04 23:25:02]  *** Contents of shared directory: ***
[2025-06-04 23:25:02] total 386500
[2025-06-04 23:25:02] -rw-r--r--. 2 boinc boinc 216723016 Jun  4 19:33 ATLAS.root_0
[2025-06-04 23:25:02] -rw-r--r--. 2 boinc boinc     15093 Jun  4 19:33 start_atlas.sh
[2025-06-04 23:25:02] -rw-r--r--. 2 boinc boinc    508884 Jun  4 19:33 input.tar.gz
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc 176965905 Jun  4 23:23 HITS.pool.root.1
[2025-06-04 23:25:02] -rw-------. 1 boinc boinc   1556480 Jun  4 23:25 result.tar.gz
23:25:04 (6987): run_atlas exited; CPU time 49795.915843
23:25:04 (6987): called boinc_finish(0)

</stderr_txt>
]]>

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