Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-05 00:08:47 (4636): Detected: vboxwrapper 26206
2025-06-05 00:08:47 (4636): Detected: BOINC client v8.0.2
2025-06-05 00:08:47 (4636): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-06-05 00:08:48 (4636): Successfully copied 'init_data.xml' to the shared directory.
2025-06-05 00:08:48 (4636): Create VM. (boinc_c755489ca6e284e0, slot#1)
2025-06-05 00:08:49 (4636): Setting Memory Size for VM. (4700MB)
2025-06-05 00:08:49 (4636): Setting CPU Count for VM. (7)
2025-06-05 00:08:49 (4636): Setting Chipset Options for VM.
2025-06-05 00:08:49 (4636): Setting Graphics Controller Options for VM.
2025-06-05 00:08:50 (4636): Setting Boot Options for VM.
2025-06-05 00:08:50 (4636): Setting Network Configuration for NAT.
2025-06-05 00:08:50 (4636): Enabling VM Network Access.
2025-06-05 00:08:50 (4636): Disabling USB Support for VM.
2025-06-05 00:08:51 (4636): Disabling COM Port Support for VM.
2025-06-05 00:08:51 (4636): Disabling LPT Port Support for VM.
2025-06-05 00:08:51 (4636): Disabling Audio Support for VM.
2025-06-05 00:08:51 (4636): Disabling Clipboard Support for VM.
2025-06-05 00:08:52 (4636): Disabling Drag and Drop Support for VM.
2025-06-05 00:08:52 (4636): Adding storage controller(s) to VM.
2025-06-05 00:08:52 (4636): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-05 00:08:55 (4636): Adding VirtualBox Guest Additions to VM.
2025-06-05 00:08:55 (4636): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-05 00:08:55 (4636): forwarding host port 55875 to guest port 80
2025-06-05 00:08:56 (4636): Enabling remote desktop for VM.
2025-06-05 00:08:56 (4636): Required extension pack not installed, remote desktop not enabled.
2025-06-05 00:08:56 (4636): Enabling shared directory for VM.
2025-06-05 00:08:56 (4636): Starting VM using VBoxManage interface. (boinc_c755489ca6e284e0, slot#1)
2025-06-05 00:09:02 (4636): Successfully started VM. (PID = '17332')
2025-06-05 00:09:02 (4636): Reporting VM Process ID to BOINC.
2025-06-05 00:09:02 (4636): Guest Log: BIOS: VirtualBox 7.0.6
2025-06-05 00:09:02 (4636): Guest Log: CPUID EDX: 0x178bfbff
2025-06-05 00:09:02 (4636): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-05 00:09:02 (4636): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-05 00:09:02 (4636): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-05 00:09:02 (4636): Detected: Web Application Enabled (http://localhost:55875)
2025-06-05 00:09:02 (4636): Preference change detected
2025-06-05 00:09:02 (4636): Setting CPU throttle for VM. (65%)
2025-06-05 00:09:03 (4636): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-05 00:09:04 (4636): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-05 00:09:04 (4636): Guest Log: BIOS: Booting from Hard Disk...
2025-06-05 00:09:07 (4636): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-05 00:09:07 (4636): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-05 00:09:07 (4636): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-05 00:09:16 (4636): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-05 00:09:16 (4636): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-05 00:09:22 (4636): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-05 00:09:22 (4636): Guest Log: 00:00:00.000137 main     Log opened 2025-06-05T00:09:20.199998000Z
2025-06-05 00:09:22 (4636): Guest Log: 00:00:00.000216 main     OS Product: Linux
2025-06-05 00:09:22 (4636): Guest Log: 00:00:00.000247 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-05 00:09:22 (4636): Guest Log: 00:00:00.000270 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-05 00:09:22 (4636): Guest Log: 00:00:00.000294 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-05 00:09:22 (4636): Guest Log: 00:00:00.000295 main     Process ID: 1355
2025-06-05 00:09:22 (4636): Guest Log: 00:00:00.000296 main     Package type: LINUX_64BITS_GENERIC
2025-06-05 00:09:22 (4636): Guest Log: 00:00:00.001178 main     5.2.32 r132073 started. Verbose level = 0
2025-06-05 00:09:22 (4636): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-05 00:09:22 (4636): Guest Log: [INFO] Mounting shared directory
2025-06-05 00:09:22 (4636): Guest Log: [INFO] Checking for init_data.xml
2025-06-05 00:09:25 (4636): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-05 00:09:25 (4636): Guest Log: [INFO] Detected branch: prod
2025-06-05 00:09:25 (4636): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-05 00:09:25 (4636): Guest Log: Copying input files
2025-06-05 00:09:27 (4636): Guest Log: Copied input files into RunAtlas.
2025-06-05 00:09:27 (4636): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-05 00:09:27 (4636): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-05 00:09:27 (4636): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-05 00:09:27 (4636): Guest Log: Further information can be found at the LHC@home message board.
2025-06-05 00:09:32 (4636): Guest Log: 00:00:10.015504 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 612 247 572 000ns (GuestNow=1 749 103 772 450 451 000 ns GuestLast=1 749 082 160 202 879 000 ns fSetTimeLastLoop=true )
2025-06-05 00:09:35 (4636): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-05 00:09:35 (4636): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-05 00:09:35 (4636): Guest Log: 2.6.3.0 1632 0 30160 146807 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-05 00:09:36 (4636): Guest Log: copied the webapp to /var/www
2025-06-05 00:09:36 (4636): Guest Log: ATHENA_PROC_NUMBER=7
2025-06-05 00:09:36 (4636): Guest Log: ATHENA_CORE_NUMBER=7
2025-06-05 00:09:36 (4636): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-05 00:09:36 (4636): Guest Log:  *** Starting ATLAS job. (PandaID=6678312764 taskID=45006595) ***
2025-06-05 01:49:06 (4636): Status Report: Elapsed Time: '6000.000000'
2025-06-05 01:49:06 (4636): Status Report: CPU Time: '29571.203125'
2025-06-05 02:37:57 (4636): Guest Log:  *** Job finished ***
2025-06-05 02:37:57 (4636): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:44,713 | INFO     | [data] queue_monitor thread has finished
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:49,556 | INFO     | job.realtimelogging is not enabled
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:50,623 | INFO     | [payload] run_realtimelog thread has finished
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:50,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229299324736)>', '<ExcThread(monitor, started 140228702484224)>']
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:51,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:51,057 | INFO     | [monitor] control thread has ended
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,009 | INFO     | all workflow threads have been joined
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,010 | INFO     | end of generic workflow (traces error code: 0)
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,010 | INFO     | traces error code: 0
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,084 [wrapper] ==== pilot stdout END ====
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,089 [wrapper] ==== wrapper stdout RESUME ====
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,094 [wrapper] pilotpid: 5949
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,098 [wrapper] Pilot exit status: 0
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,145 [wrapper] pandaids: 6678312764
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,172 [wrapper] cleanup supervisor_pilot  5364 5950
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,179 [wrapper] Test setup, not cleaning
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,183 [wrapper] apfmon messages muted
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,188 [wrapper] ==== wrapper stdout END ====
2025-06-05 02:37:57 (4636): Guest Log: 2025-06-05 08:37:56,192 [wrapper] ==== wrapper stderr END ====
2025-06-05 02:37:57 (4636): Guest Log:  *** Error codes and diagnostics ***
2025-06-05 02:37:57 (4636): Guest Log:     "exeErrorCode": 0,
2025-06-05 02:37:57 (4636): Guest Log:     "exeErrorDiag": "",
2025-06-05 02:37:57 (4636): Guest Log:     "pilotErrorCode": 0,
2025-06-05 02:37:57 (4636): Guest Log:     "pilotErrorDiag": "",
2025-06-05 02:37:57 (4636): Guest Log:  *** Listing of results directory ***
2025-06-05 02:37:57 (4636): Guest Log: total 178428
2025-06-05 02:37:57 (4636): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 04:04 pilot3.tar.gz
2025-06-05 02:37:57 (4636): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 04:15 runpilot2-wrapper.sh
2025-06-05 02:37:57 (4636): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 04:15 queuedata.json
2025-06-05 02:37:57 (4636): Guest Log: -rwxr-xr-x. 1 atlas atlas      8997 Jun  5 06:09 init_data.xml
2025-06-05 02:37:57 (4636): Guest Log: -rwxr-xr-x. 1 atlas atlas    508875 Jun  5 06:09 input.tar.gz
2025-06-05 02:37:57 (4636): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  5 06:09 start_atlas.sh
2025-06-05 02:37:57 (4636): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  5 06:09 EVNT.45006593._002091.pool.root.1 -> /data/./ATLAS.root_0
2025-06-05 02:37:57 (4636): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  5 06:09 pandaJob.out
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas    987109 Jun  5 06:10 agis_schedconf.cvmfs.json
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  5 06:10 agis_ddmendpoints.agis.ALL.json
2025-06-05 02:37:57 (4636): Guest Log: drwx------. 4 atlas atlas      4096 Jun  5 06:10 pilot3
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas 176936185 Jun  5 08:36 HITS.45006595._052210.pool.root.1
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas        95 Jun  5 08:37 pilot_heartbeat.json
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  5 08:37 memory_monitor_summary.json
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas    312725 Jun  5 08:37 log.45006595._052210.job.log.tgz.1
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas      7726 Jun  5 08:37 heartbeat.json
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas      4608 Jun  5 08:37 pilotlog.txt
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas    696139 Jun  5 08:37 log.45006595._052210.job.log.1
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas       357 Jun  5 08:37 output.list
2025-06-05 02:37:57 (4636): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  5 08:37 runtime_log
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas   1024000 Jun  5 08:37 result.tar.gz
2025-06-05 02:37:57 (4636): Guest Log: -rw-r--r--. 1 atlas atlas      8574 Jun  5 08:37 runtime_log.err
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas       647 Jun  5 08:37 fRdNDmgiug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHAnKDmVzijQo.diag
2025-06-05 02:37:57 (4636): Guest Log: Looking for outputfile HITS.45006595._052210.pool.root.1
2025-06-05 02:37:57 (4636): Guest Log: HITS file was successfully produced
2025-06-05 02:37:57 (4636): Guest Log: -rw-------. 1 atlas atlas 176936185 Jun  5 08:36 /home/atlas/RunAtlas/HITS.45006595._052210.pool.root.1
2025-06-05 02:37:58 (4636): Guest Log: Successfully finished the ATLAS job!
2025-06-05 02:37:58 (4636): Guest Log: Copying the results back to the shared directory!
2025-06-05 02:37:58 (4636): Guest Log:  *** Contents of shared directory: ***
2025-06-05 02:37:58 (4636): Guest Log: total 383492
2025-06-05 02:37:58 (4636): Guest Log: -rwxrwxrwx. 1 root root 214191031 Jun  5 06:08 ATLAS.root_0
2025-06-05 02:37:58 (4636): Guest Log: -rwxrwxrwx. 1 root root 176936185 Jun  5 08:37 HITS.pool.root.1
2025-06-05 02:37:58 (4636): Guest Log: -rwxrwxrwx. 1 root root      8997 Jun  5 06:08 init_data.xml
2025-06-05 02:37:58 (4636): Guest Log: -rwxrwxrwx. 1 root root    508875 Jun  4 09:06 input.tar.gz
2025-06-05 02:37:58 (4636): Guest Log: -rwxrwxrwx. 1 root root   1024000 Jun  5  2025 result.tar.gz
2025-06-05 02:37:58 (4636): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 09:06 start_atlas.sh
2025-06-05 02:37:58 (4636): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-05 02:37:58 (4636): VM Completion File Detected.
2025-06-05 02:37:58 (4636): Powering off VM.
2025-06-05 02:37:59 (4636): Successfully stopped VM.
2025-06-05 02:37:59 (4636): Deregistering VM. (boinc_c755489ca6e284e0, slot#1)
2025-06-05 02:37:59 (4636): Removing network bandwidth throttle group from VM.
2025-06-05 02:37:59 (4636): Removing VM from VirtualBox.
02:38:04 (4636): called boinc_finish(0)

</stderr_txt>
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