Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:18:32 (438661): wrapper (7.7.26015): starting
15:18:32 (438661): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 15:18:32] Arguments: --nthreads 12
[2025-06-04 15:18:32] Threads: 12
[2025-06-04 15:18:32] Checking for CVMFS
[2025-06-04 15:18:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:18:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:18:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:18:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:18:32] 2.12.7.0 3387806 2501 85268 146780 2 187 3273840 4097024 0 130560 0 2798412 99.993 601268 6802 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-04 15:18:32] CVMFS is ok
[2025-06-04 15:18:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:18:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:18:32] Further information can be found at the LHC@home message board.
[2025-06-04 15:18:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:18:32] Checking for apptainer binary...
[2025-06-04 15:18:32] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-04 15:18:32] apptainer is not installed, using version from CVMFS
[2025-06-04 15:18:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:18:33] pckelar5.cern.ch
[2025-06-04 15:18:33] apptainer works
[2025-06-04 15:18:33] Set ATHENA_PROC_NUMBER=12
[2025-06-04 15:18:33] Set ATHENA_CORE_NUMBER=12
[2025-06-04 15:18:33] Starting ATLAS job with PandaID=6678312689
[2025-06-04 15:18:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:19:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:19:18]  scope=mc23_13p6TeV
[2025-06-04 16:19:18]  status=None
[2025-06-04 16:19:18]  status_code=0
[2025-06-04 16:19:18]  storage_token=
[2025-06-04 16:19:18]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678312689/log.45006595._052135.job.log.tgz.1
[2025-06-04 16:19:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/a6/log.45006595._052135.job.log.tgz.1
[2025-06-04 16:19:18]  workdir=None
[2025-06-04 16:19:18] ]
[2025-06-04 16:19:18] 2025-06-04 14:18:59,207 | INFO     | transferring file log.45006595._052135.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678312689/log.45006595._052135.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 16:19:18] 2025-06-04 14:18:59,207 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678312689/log.45006595._052135.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._052135.job
[2025-06-04 16:19:18] 2025-06-04 14:18:59,224 | INFO     | adding to output.list: log.45006595._052135.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/a6/log.45006595._052135.job.log.tg
[2025-06-04 16:19:18] 2025-06-04 14:18:59,225 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 16:19:18] 2025-06-04 14:18:59,225 | INFO     | summary of transferred files:
[2025-06-04 16:19:18] 2025-06-04 14:18:59,225 | INFO     |  -- lfn=log.45006595._052135.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 16:19:18] 2025-06-04 14:18:59,225 | INFO     | stage-out finished correctly
[2025-06-04 16:19:18] 2025-06-04 14:19:01,584 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 16:19:18] 2025-06-04 14:19:03,066 | INFO     | job 6678312689 has state=finished
[2025-06-04 16:19:18] 2025-06-04 14:19:03,067 | INFO     | preparing for final server update for job 6678312689 in state='finished'
[2025-06-04 16:19:18] 2025-06-04 14:19:03,067 | INFO     | this job has now completed (state=finished)
[2025-06-04 16:19:18] 2025-06-04 14:19:03,067 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 16:19:18] 2025-06-04 14:19:03,067 | INFO     | log transfer has been attempted: DONE
[2025-06-04 16:19:18] 2025-06-04 14:19:03,067 | INFO     | job 6678312689 has finished - writing final server update
[2025-06-04 16:19:18] 2025-06-04 14:19:03,067 | INFO     | total number of processed events: 400 (read)
[2025-06-04 16:19:18] 2025-06-04 14:19:03,069 | INFO     | executing command: lscpu
[2025-06-04 16:19:18] 2025-06-04 14:19:03,088 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:19:18] 2025-06-04 14:19:05,208 | WARNING  | process 449450 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 16:19:18] 2025-06-04 14:19:05,209 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678312689/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:19:18] 2025-06-04 14:19:05,209 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678312689/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:19:18] 2025-06-04 14:19:05,210 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3998377 B
[2025-06-04 16:19:18] 2025-06-04 14:19:05,210 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15781 B
[2025-06-04 16:19:18] 2025-06-04 14:19:05,210 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 16:19:18] 2025-06-04 14:19:06,783 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 16:19:18] 2025-06-04 14:19:06,784 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678312689/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:19:18] 2025-06-04 14:19:06,784 | INFO     | extracted standard info from prmon json
[2025-06-04 16:19:18] 2025-06-04 14:19:06,784 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:19:18] 2025-06-04 14:19:06,785 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:19:18] 2025-06-04 14:19:06,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:19:18] 2025-06-04 14:19:06,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:19:18] 2025-06-04 14:19:06,790 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:19:18] 2025-06-04 14:19:06,791 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 16:19:18] 2025-06-04 14:19:06,791 | INFO     | sum of deviations: -2016073271.5000005
[2025-06-04 16:19:18] 2025-06-04 14:19:06,791 | INFO     | mean x: 1749045002.5
[2025-06-04 16:19:18] 2025-06-04 14:19:06,791 | INFO     | mean y: 2763163.480769231
[2025-06-04 16:19:18] 2025-06-04 14:19:06,792 | INFO     | -- intersect: 80908530740.34082
[2025-06-04 16:19:18] 2025-06-04 14:19:06,792 | INFO     | intersect: 80908530740.34082
[2025-06-04 16:19:18] 2025-06-04 14:19:06,792 | INFO     | chi2: 0.06362778059082573
[2025-06-04 16:19:18] 2025-06-04 14:19:06,792 | INFO     | -- intersect: 80908530740.34082
[2025-06-04 16:19:18] 2025-06-04 14:19:06,792 | INFO     | current memory leak: -46.26 B/s (using 52 data points, chi2=0.06)
[2025-06-04 16:19:18] 2025-06-04 14:19:06,792 | INFO     | ..............................
[2025-06-04 16:19:18] 2025-06-04 14:19:06,792 | INFO     | . Timing measurements:
[2025-06-04 16:19:18] 2025-06-04 14:19:06,793 | INFO     | . get job = 0 s
[2025-06-04 16:19:18] 2025-06-04 14:19:06,793 | INFO     | . initial setup = 1 s
[2025-06-04 16:19:18] 2025-06-04 14:19:06,793 | INFO     | . payload setup = 5 s
[2025-06-04 16:19:18] 2025-06-04 14:19:06,793 | INFO     | . stage-in = 0 s
[2025-06-04 16:19:18] 2025-06-04 14:19:06,793 | INFO     | . payload execution = 3597 s
[2025-06-04 16:19:18] 2025-06-04 14:19:06,793 | INFO     | . stage-out = 0 s
[2025-06-04 16:19:18] 2025-06-04 14:19:06,793 | INFO     | . log creation = 0 s
[2025-06-04 16:19:18] 2025-06-04 14:19:06,793 | INFO     | ..............................
[2025-06-04 16:19:18] 2025-06-04 14:19:06,812 | INFO     | sufficient remaining disk space (1816264704000 B)
[2025-06-04 16:19:18] 2025-06-04 14:19:06,828 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 16:19:18] 2025-06-04 14:19:06,866 | INFO     | 
[2025-06-04 16:19:18] 2025-06-04 14:19:06,867 | INFO     | job summary report
[2025-06-04 16:19:18] 2025-06-04 14:19:06,867 | INFO     | --------------------------------------------------
[2025-06-04 16:19:18] 2025-06-04 14:19:06,867 | INFO     | PanDA job id: 6678312689
[2025-06-04 16:19:18] 2025-06-04 14:19:06,867 | INFO     | task id: 45006595
[2025-06-04 16:19:18] 2025-06-04 14:19:06,867 | INFO     | errors: (none)
[2025-06-04 16:19:18] 2025-06-04 14:19:06,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:19:18] 2025-06-04 14:19:06,867 | INFO     | pilot state: finished 
[2025-06-04 16:19:18] 2025-06-04 14:19:06,867 | INFO     | transexitcode: 0
[2025-06-04 16:19:18] 2025-06-04 14:19:06,867 | INFO     | exeerrorcode: 0
[2025-06-04 16:19:18] 2025-06-04 14:19:06,868 | INFO     | exeerrordiag: 
[2025-06-04 16:19:18] 2025-06-04 14:19:06,868 | INFO     | exitcode: 0
[2025-06-04 16:19:18] 2025-06-04 14:19:06,868 | INFO     | exitmsg: OK
[2025-06-04 16:19:18] 2025-06-04 14:19:06,868 | INFO     | cpuconsumptiontime: 38848 s
[2025-06-04 16:19:18] 2025-06-04 14:19:06,868 | INFO     | nevents: 400
[2025-06-04 16:19:18] 2025-06-04 14:19:06,868 | INFO     | neventsw: 0
[2025-06-04 16:19:18] 2025-06-04 14:19:06,868 | INFO     | pid: 449450
[2025-06-04 16:19:18] 2025-06-04 14:19:06,868 | INFO     | pgrp: 449450
[2025-06-04 16:19:18] 2025-06-04 14:19:06,869 | INFO     | corecount: 12
[2025-06-04 16:19:18] 2025-06-04 14:19:06,869 | INFO     | event service: False
[2025-06-04 16:19:18] 2025-06-04 14:19:06,869 | INFO     | sizes: {0: 2396514, 1: 2397370, 4: 2397576, 12: 2397604, 3603: 2423250, 3604: 2423249, 3606: 2432374, 3608: 2432430, 3614: 2432600}
[2025-06-04 16:19:18] 2025-06-04 14:19:06,869 | INFO     | --------------------------------------------------
[2025-06-04 16:19:18] 2025-06-04 14:19:06,869 | INFO     | 
[2025-06-04 16:19:18] 2025-06-04 14:19:06,869 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 16:19:18] 2025-06-04 14:19:06,873 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6678312689: 4288223 B (within 2537553920 B limit)
[2025-06-04 16:19:18] 2025-06-04 14:19:06,873 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6678312689/HITS.45006595._052135.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 16:19:18] 2025-06-04 14:19:06,874 | INFO     | total size of present files: 0 B (workdir size: 4288223 B)
[2025-06-04 16:19:18] 2025-06-04 14:19:06,874 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6678312689/HITS.45006595._052135.pool.root.1 since it does not exist
[2025-06-04 16:19:18] 2025-06-04 14:19:06,884 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,885 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,885 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,885 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,887 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:19:18] 2025-06-04 14:19:06,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,887 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:19:18] 2025-06-04 14:19:06,887 | INFO     | job 6678312689 has completed (purged errors)
[2025-06-04 16:19:18] 2025-06-04 14:19:06,887 | INFO     | overall cleanup function is called
[2025-06-04 16:19:18] 2025-06-04 14:19:06,959 | INFO     | number of running child processes to parent process 449450: 1
[2025-06-04 16:19:18] 2025-06-04 14:19:06,959 | INFO     | maximum number of monitored processes: 6
[2025-06-04 16:19:18] 2025-06-04 14:19:06,960 | INFO     | aborting job monitoring since job object (job id=6678312689) has expired
[2025-06-04 16:19:18] 2025-06-04 14:19:07,895 | INFO     | --- collectZombieJob: --- 10, [449450]
[2025-06-04 16:19:18] 2025-06-04 14:19:07,895 | INFO     | zombie collector waiting for pid 449450
[2025-06-04 16:19:18] 2025-06-04 14:19:07,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:19:18] 2025-06-04 14:19:07,895 | INFO     | collected zombie processes
[2025-06-04 16:19:18] 2025-06-04 14:19:07,895 | INFO     | will attempt to kill all subprocesses of pid=449450
[2025-06-04 16:19:18] 2025-06-04 14:19:07,969 | INFO     | process IDs to be killed: [449450] (in reverse order)
[2025-06-04 16:19:18] 2025-06-04 14:19:08,002 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:19:18] 2025-06-04 14:19:08,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:19:18] 2025-06-04 14:19:08,005 | INFO     | did not find any defunct processes belonging to 449450
[2025-06-04 16:19:18] 2025-06-04 14:19:08,007 | INFO     | did not find any defunct processes belonging to 449450
[2025-06-04 16:19:18] 2025-06-04 14:19:08,007 | INFO     | ready for new job
[2025-06-04 16:19:18] 2025-06-04 14:19:08,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:19:18] 2025-06-04 14:19:08,008 | INFO     | **************************************
[2025-06-04 16:19:18] 2025-06-04 14:19:08,008 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:19:18] 2025-06-04 14:19:08,008 | INFO     | **************************************
[2025-06-04 16:19:18] 2025-06-04 14:19:08,008 | INFO     | 
[2025-06-04 16:19:18] 2025-06-04 14:19:08,009 | INFO     | architecture information:
[2025-06-04 16:19:18] 2025-06-04 14:19:08,009 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:19:18] 2025-06-04 14:19:08,020 | INFO     | cat /etc/os-release:
[2025-06-04 16:19:18] NAME="CentOS Linux"
[2025-06-04 16:19:18] VERSION="7 (Core)"
[2025-06-04 16:19:18] ID="centos"
[2025-06-04 16:19:18] ID_LIKE="rhel fedora"
[2025-06-04 16:19:18] VERSION_ID="7"
[2025-06-04 16:19:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:19:18] ANSI_COLOR="0;31"
[2025-06-04 16:19:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:19:18] HOME_URL="https://www.centos.org/"
[2025-06-04 16:19:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:19:18] 
[2025-06-04 16:19:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:19:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:19:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:19:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:19:18] 
[2025-06-04 16:19:18] 2025-06-04 14:19:08,020 | INFO     | **************************************
[2025-06-04 16:19:18] 2025-06-04 14:19:08,523 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 16:19:18] 2025-06-04 14:19:08,533 | INFO     | sufficient remaining disk space (1816269946880 B)
[2025-06-04 16:19:18] 2025-06-04 14:19:08,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:19:18] 2025-06-04 14:19:08,534 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:19:18] 2025-06-04 14:19:08,534 | INFO     | update_server=False
[2025-06-04 16:19:18] 2025-06-04 14:19:08,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:19:18] 2025-06-04 14:19:08,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:19:18] 2025-06-04 14:19:08,534 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:19:18] 2025-06-04 14:19:08,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:19:18] 2025-06-04 14:19:08,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:19:18] 2025-06-04 14:19:08,535 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:19:18] 2025-06-04 14:19:08,535 | INFO     | aborting loop
[2025-06-04 16:19:18] 2025-06-04 14:19:08,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:19:18] 2025-06-04 14:19:08,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:19:18] 2025-06-04 14:19:08,964 | INFO     | all data control threads have been joined
[2025-06-04 16:19:18] 2025-06-04 14:19:09,539 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:09,540 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:09,541 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:09,578 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:09,654 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:09,731 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:09,782 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:09,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:19:18] 2025-06-04 14:19:09,882 | INFO     | all job control threads have been joined
[2025-06-04 16:19:18] 2025-06-04 14:19:09,969 | INFO     | [data] control thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:09,981 | INFO     | all payload control threads have been joined
[2025-06-04 16:19:18] 2025-06-04 14:19:10,498 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:10,888 | INFO     | [job] control thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:10,919 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:10,986 | INFO     | [payload] control thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:11,041 | INFO     | [job] validate thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:11,053 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:11,812 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:12,540 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:19:18] 2025-06-04 14:19:13,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140188360472384)>', '<ExcThread(monitor, started 140187522819840)>']
[2025-06-04 16:19:18] 2025-06-04 14:19:13,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:19:18] 2025-06-04 14:19:13,561 | INFO     | [monitor] control thread has ended
[2025-06-04 16:19:18] 2025-06-04 14:19:18,166 | INFO     | all workflow threads have been joined
[2025-06-04 16:19:18] 2025-06-04 14:19:18,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:19:18] 2025-06-04 14:19:18,166 | INFO     | traces error code: 0
[2025-06-04 16:19:18] 2025-06-04 14:19:18,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:19:18] 2025-06-04 14:19:18,236 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:19:18] 2025-06-04 14:19:18,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:19:18] 2025-06-04 14:19:18,241 [wrapper] pilotpid: 442333
[2025-06-04 16:19:18] 2025-06-04 14:19:18,244 [wrapper] Pilot exit status: 0
[2025-06-04 16:19:18] 2025-06-04 14:19:18,252 [wrapper] pandaids: 6678312689
[2025-06-04 16:19:18] 2025-06-04 14:19:18,271 [wrapper] cleanup supervisor_pilot  465525 442334
[2025-06-04 16:19:18] 2025-06-04 14:19:18,273 [wrapper] Test setup, not cleaning
[2025-06-04 16:19:18] 2025-06-04 14:19:18,275 [wrapper] apfmon messages muted
[2025-06-04 16:19:18] 2025-06-04 14:19:18,277 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:19:18] 2025-06-04 14:19:18,279 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:19:18]  *** Error codes and diagnostics ***
[2025-06-04 16:19:18]     "exeErrorCode": 0,
[2025-06-04 16:19:18]     "exeErrorDiag": "",
[2025-06-04 16:19:18]     "pilotErrorCode": 0,
[2025-06-04 16:19:18]     "pilotErrorDiag": "",
[2025-06-04 16:19:18]  *** Listing of results directory ***
[2025-06-04 16:19:18] total 388192
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc      5111 Jun  4 06:12 queuedata.json
[2025-06-04 16:19:18] -rwx------ 1 boinc boinc     37140 Jun  4 06:14 runpilot2-wrapper.sh
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:19:18] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:18 run_atlas
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:18 job.xml
[2025-06-04 16:19:18] -rw-r--r-- 2 boinc boinc 212544672 Jun  4 15:18 EVNT.45006593._002088.pool.root.1
[2025-06-04 16:19:18] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:18 start_atlas.sh
[2025-06-04 16:19:18] drwxrwx--x 2 boinc boinc        68 Jun  4 15:18 shared
[2025-06-04 16:19:18] -rw-r--r-- 2 boinc boinc    508882 Jun  4 15:18 input.tar.gz
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc      6254 Jun  4 15:18 init_data.xml
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:18 boinc_lockfile
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc      2525 Jun  4 15:18 pandaJob.out
[2025-06-04 16:19:18] -rw------- 1 boinc boinc    986811 Jun  4 15:18 agis_schedconf.cvmfs.json
[2025-06-04 16:19:18] -rw------- 1 boinc boinc   1598969 Jun  4 15:18 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:19:18] drwx------ 4 boinc boinc      4096 Jun  4 15:18 pilot3
[2025-06-04 16:19:18] -rw------- 1 boinc boinc        95 Jun  4 16:18 pilot_heartbeat.json
[2025-06-04 16:19:18] -rw------- 1 boinc boinc 179746431 Jun  4 16:18 HITS.45006595._052135.pool.root.1
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc       529 Jun  4 16:18 boinc_task_state.xml
[2025-06-04 16:19:18] -rw------- 1 boinc boinc      1017 Jun  4 16:18 memory_monitor_summary.json
[2025-06-04 16:19:18] -rw------- 1 boinc boinc    344912 Jun  4 16:18 log.45006595._052135.job.log.tgz.1
[2025-06-04 16:19:18] -rw------- 1 boinc boinc      7682 Jun  4 16:19 heartbeat.json
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc        27 Jun  4 16:19 wrapper_checkpoint.txt
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:19 boinc_mmap_file
[2025-06-04 16:19:18] -rw------- 1 boinc boinc      4478 Jun  4 16:19 pilotlog.txt
[2025-06-04 16:19:18] -rw------- 1 boinc boinc    357623 Jun  4 16:19 log.45006595._052135.job.log.1
[2025-06-04 16:19:18] -rw------- 1 boinc boinc       357 Jun  4 16:19 output.list
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:19 runtime_log
[2025-06-04 16:19:18] -rw------- 1 boinc boinc    716800 Jun  4 16:19 result.tar.gz
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc      8683 Jun  4 16:19 runtime_log.err
[2025-06-04 16:19:18] -rw------- 1 boinc boinc       654 Jun  4 16:19 4xMODmhhug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp9mKDm5JGlQn.diag
[2025-06-04 16:19:18] -rw-r--r-- 1 boinc boinc     22282 Jun  4 16:19 stderr.txt
[2025-06-04 16:19:18] HITS file was successfully produced:
[2025-06-04 16:19:18] -rw------- 1 boinc boinc 179746431 Jun  4 16:18 shared/HITS.pool.root.1
[2025-06-04 16:19:18]  *** Contents of shared directory: ***
[2025-06-04 16:19:18] total 384316
[2025-06-04 16:19:18] -rw-r--r-- 2 boinc boinc 212544672 Jun  4 15:18 ATLAS.root_0
[2025-06-04 16:19:18] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:18 start_atlas.sh
[2025-06-04 16:19:18] -rw-r--r-- 2 boinc boinc    508882 Jun  4 15:18 input.tar.gz
[2025-06-04 16:19:18] -rw------- 1 boinc boinc 179746431 Jun  4 16:18 HITS.pool.root.1
[2025-06-04 16:19:18] -rw------- 1 boinc boinc    716800 Jun  4 16:19 result.tar.gz
16:19:20 (438661): run_atlas exited; CPU time 38858.030937
16:19:20 (438661): called boinc_finish(0)

</stderr_txt>
]]>

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