Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:32:06 (3681390): wrapper (7.7.26015): starting
05:32:06 (3681390): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:32:06] Arguments: --nthreads 8
[2025-06-04 05:32:06] Threads: 8
[2025-06-04 05:32:06] Checking for CVMFS
[2025-06-04 05:32:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:32:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:32:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:32:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:32:06] 2.12.6.0 3854649 23097 463868 146775 1 254 25172752 32935937 9370 16776704 0 109768383 99.675 101456000 32698 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 05:32:06] CVMFS is ok
[2025-06-04 05:32:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:32:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:32:06] Further information can be found at the LHC@home message board.
[2025-06-04 05:32:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:32:06] Checking for apptainer binary...
[2025-06-04 05:32:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:32:06] Running /usr/bin/apptainer --version
[2025-06-04 05:32:06] apptainer version 1.4.1-1.el9
[2025-06-04 05:32:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:32:07] c6-4-5-3.aglt2.org
[2025-06-04 05:32:07] apptainer works
[2025-06-04 05:32:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:32:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:32:07] Starting ATLAS job with PandaID=6678312683
[2025-06-04 05:32:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:27:53]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:27:53]  guid=6483ee31-a7d7-4a88-80ba-80109de68549
[2025-06-04 06:27:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 06:27:53]  is_altstaged=None
[2025-06-04 06:27:53]  is_tar=False
[2025-06-04 06:27:53]  lfn=log.45006595._052129.job.log.tgz.1
[2025-06-04 06:27:53]  mtime=0
[2025-06-04 06:27:53]  protocol_id=None
[2025-06-04 06:27:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 06:27:53]  replicas=None
[2025-06-04 06:27:53]  scope=mc23_13p6TeV
[2025-06-04 06:27:53]  status=None
[2025-06-04 06:27:53]  status_code=0
[2025-06-04 06:27:53]  storage_token=
[2025-06-04 06:27:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678312683/log.45006595._052129.job.log.tgz.1
[2025-06-04 06:27:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/6e/log.45006595._052129.job.log.tgz.1
[2025-06-04 06:27:53]  workdir=None
[2025-06-04 06:27:53] ]
[2025-06-04 06:27:53] 2025-06-04 10:27:30,400 | INFO     | transferring file log.45006595._052129.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678312683/log.45006595._052129.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 06:27:53] 2025-06-04 10:27:30,400 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678312683/log.45006595._052129.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052129.job
[2025-06-04 06:27:53] 2025-06-04 10:27:30,413 | INFO     | adding to output.list: log.45006595._052129.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/6e/log.45006595._052129.job.log.tg
[2025-06-04 06:27:53] 2025-06-04 10:27:30,414 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 06:27:53] 2025-06-04 10:27:30,414 | INFO     | summary of transferred files:
[2025-06-04 06:27:53] 2025-06-04 10:27:30,414 | INFO     |  -- lfn=log.45006595._052129.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 06:27:53] 2025-06-04 10:27:30,415 | INFO     | stage-out finished correctly
[2025-06-04 06:27:53] 2025-06-04 10:27:30,732 | INFO     | monitor loop #250: job 0:6678312683 is in state 'finished'
[2025-06-04 06:27:53] 2025-06-04 10:27:30,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:27:53] 2025-06-04 10:27:31,704 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 06:27:53] 2025-06-04 10:27:33,246 | INFO     | monitor loop #251: job 0:6678312683 is in state 'finished'
[2025-06-04 06:27:53] 2025-06-04 10:27:33,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:27:53] 2025-06-04 10:27:34,149 | INFO     | job 6678312683 has state=finished
[2025-06-04 06:27:53] 2025-06-04 10:27:34,149 | INFO     | preparing for final server update for job 6678312683 in state='finished'
[2025-06-04 06:27:53] 2025-06-04 10:27:34,149 | INFO     | this job has now completed (state=finished)
[2025-06-04 06:27:53] 2025-06-04 10:27:34,150 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 06:27:53] 2025-06-04 10:27:34,150 | INFO     | log transfer has been attempted: DONE
[2025-06-04 06:27:53] 2025-06-04 10:27:34,150 | INFO     | job 6678312683 has finished - writing final server update
[2025-06-04 06:27:53] 2025-06-04 10:27:34,150 | INFO     | total number of processed events: 400 (read)
[2025-06-04 06:27:53] 2025-06-04 10:27:34,168 | INFO     | executing command: lscpu
[2025-06-04 06:27:53] 2025-06-04 10:27:34,239 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 06:27:53] 2025-06-04 10:27:35,749 | INFO     | monitor loop #252: job 0:6678312683 is in state 'finished'
[2025-06-04 06:27:53] 2025-06-04 10:27:35,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:27:53] 2025-06-04 10:27:37,287 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 06:27:53] 2025-06-04 10:27:37,287 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678312683/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:27:53] 2025-06-04 10:27:37,288 | INFO     | extracted standard info from prmon json
[2025-06-04 06:27:53] 2025-06-04 10:27:37,288 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:27:53] 2025-06-04 10:27:37,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:27:53] 2025-06-04 10:27:37,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:27:53] 2025-06-04 10:27:37,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:27:53] 2025-06-04 10:27:37,290 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:27:53] 2025-06-04 10:27:37,290 | INFO     | sum of square deviations: 32179208.0
[2025-06-04 06:27:53] 2025-06-04 10:27:37,291 | INFO     | sum of deviations: 328323044.9999995
[2025-06-04 06:27:53] 2025-06-04 10:27:37,291 | INFO     | mean x: 1749031266.0
[2025-06-04 06:27:53] 2025-06-04 10:27:37,291 | INFO     | mean y: 2404394.765957447
[2025-06-04 06:27:53] 2025-06-04 10:27:37,291 | INFO     | -- intersect: -17842884745.144638
[2025-06-04 06:27:53] 2025-06-04 10:27:37,291 | INFO     | intersect: -17842884745.144638
[2025-06-04 06:27:53] 2025-06-04 10:27:37,291 | INFO     | chi2: 0.7252117947356093
[2025-06-04 06:27:53] 2025-06-04 10:27:37,291 | INFO     | -- intersect: -17842884745.144638
[2025-06-04 06:27:53] 2025-06-04 10:27:37,291 | INFO     | current memory leak: 10.20 B/s (using 47 data points, chi2=0.73)
[2025-06-04 06:27:53] 2025-06-04 10:27:37,292 | INFO     | ..............................
[2025-06-04 06:27:53] 2025-06-04 10:27:37,292 | INFO     | . Timing measurements:
[2025-06-04 06:27:53] 2025-06-04 10:27:37,292 | INFO     | . get job = 0 s
[2025-06-04 06:27:53] 2025-06-04 10:27:37,292 | INFO     | . initial setup = 2 s
[2025-06-04 06:27:53] 2025-06-04 10:27:37,292 | INFO     | . payload setup = 5 s
[2025-06-04 06:27:53] 2025-06-04 10:27:37,292 | INFO     | . stage-in = 0 s
[2025-06-04 06:27:53] 2025-06-04 10:27:37,292 | INFO     | . payload execution = 3291 s
[2025-06-04 06:27:53] 2025-06-04 10:27:37,292 | INFO     | . stage-out = 0 s
[2025-06-04 06:27:53] 2025-06-04 10:27:37,292 | INFO     | . log creation = 0 s
[2025-06-04 06:27:53] 2025-06-04 10:27:37,292 | INFO     | ..............................
[2025-06-04 06:27:53] 2025-06-04 10:27:37,837 | INFO     | 
[2025-06-04 06:27:53] 2025-06-04 10:27:37,837 | INFO     | job summary report
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | --------------------------------------------------
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | PanDA job id: 6678312683
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | task id: 45006595
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | errors: (none)
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | pilot state: finished 
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | transexitcode: 0
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | exeerrorcode: 0
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | exeerrordiag: 
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | exitcode: 0
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | exitmsg: OK
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | cpuconsumptiontime: 21457 s
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | nevents: 400
[2025-06-04 06:27:53] 2025-06-04 10:27:37,838 | INFO     | neventsw: 0
[2025-06-04 06:27:53] 2025-06-04 10:27:37,839 | INFO     | pid: 3692066
[2025-06-04 06:27:53] 2025-06-04 10:27:37,839 | INFO     | pgrp: 3692066
[2025-06-04 06:27:53] 2025-06-04 10:27:37,839 | INFO     | corecount: 8
[2025-06-04 06:27:53] 2025-06-04 10:27:37,839 | INFO     | event service: False
[2025-06-04 06:27:53] 2025-06-04 10:27:37,839 | INFO     | sizes: {0: 2405182, 4: 2405388, 11: 2405416, 3299: 2431008, 3300: 2439949, 3302: 2440005, 3307: 2440303}
[2025-06-04 06:27:53] 2025-06-04 10:27:37,839 | INFO     | --------------------------------------------------
[2025-06-04 06:27:53] 2025-06-04 10:27:37,839 | INFO     | 
[2025-06-04 06:27:53] 2025-06-04 10:27:37,839 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 06:27:53] 2025-06-04 10:27:37,860 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,860 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,860 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,860 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | job 6678312683 has completed (purged errors)
[2025-06-04 06:27:53] 2025-06-04 10:27:37,861 | INFO     | overall cleanup function is called
[2025-06-04 06:27:53] 2025-06-04 10:27:38,869 | INFO     | --- collectZombieJob: --- 10, [3692066]
[2025-06-04 06:27:53] 2025-06-04 10:27:38,869 | INFO     | zombie collector waiting for pid 3692066
[2025-06-04 06:27:53] 2025-06-04 10:27:38,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:27:53] 2025-06-04 10:27:38,869 | INFO     | collected zombie processes
[2025-06-04 06:27:53] 2025-06-04 10:27:38,869 | INFO     | will attempt to kill all subprocesses of pid=3692066
[2025-06-04 06:27:53] 2025-06-04 10:27:39,063 | INFO     | process IDs to be killed: [3692066] (in reverse order)
[2025-06-04 06:27:53] 2025-06-04 10:27:39,122 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:27:53] 2025-06-04 10:27:39,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:27:53] 2025-06-04 10:27:39,131 | INFO     | did not find any defunct processes belonging to 3692066
[2025-06-04 06:27:53] 2025-06-04 10:27:39,141 | INFO     | did not find any defunct processes belonging to 3692066
[2025-06-04 06:27:53] 2025-06-04 10:27:39,141 | INFO     | ready for new job
[2025-06-04 06:27:53] 2025-06-04 10:27:39,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:27:53] 2025-06-04 10:27:39,142 | INFO     | **************************************
[2025-06-04 06:27:53] 2025-06-04 10:27:39,143 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:27:53] 2025-06-04 10:27:39,143 | INFO     | **************************************
[2025-06-04 06:27:53] 2025-06-04 10:27:39,143 | INFO     | 
[2025-06-04 06:27:53] 2025-06-04 10:27:39,157 | INFO     | architecture information:
[2025-06-04 06:27:53] 2025-06-04 10:27:39,158 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:27:53] 2025-06-04 10:27:39,174 | INFO     | cat /etc/os-release:
[2025-06-04 06:27:53] NAME="CentOS Linux"
[2025-06-04 06:27:53] VERSION="7 (Core)"
[2025-06-04 06:27:53] ID="centos"
[2025-06-04 06:27:53] ID_LIKE="rhel fedora"
[2025-06-04 06:27:53] VERSION_ID="7"
[2025-06-04 06:27:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:27:53] ANSI_COLOR="0;31"
[2025-06-04 06:27:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:27:53] HOME_URL="https://www.centos.org/"
[2025-06-04 06:27:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:27:53] 
[2025-06-04 06:27:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:27:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:27:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:27:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:27:53] 
[2025-06-04 06:27:53] 2025-06-04 10:27:39,174 | INFO     | **************************************
[2025-06-04 06:27:53] 2025-06-04 10:27:39,677 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 06:27:53] 2025-06-04 10:27:39,693 | INFO     | sufficient remaining disk space (76087820288 B)
[2025-06-04 06:27:53] 2025-06-04 10:27:39,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:27:53] 2025-06-04 10:27:39,694 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:27:53] 2025-06-04 10:27:39,694 | INFO     | update_server=False
[2025-06-04 06:27:53] 2025-06-04 10:27:39,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:27:53] 2025-06-04 10:27:39,694 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:27:53] 2025-06-04 10:27:39,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:27:53] 2025-06-04 10:27:39,695 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:27:53] 2025-06-04 10:27:39,695 | INFO     | aborting loop
[2025-06-04 06:27:53] 2025-06-04 10:27:39,695 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:27:53] 2025-06-04 10:27:39,695 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:27:53] 2025-06-04 10:27:39,903 | INFO     | all job control threads have been joined
[2025-06-04 06:27:53] 2025-06-04 10:27:40,274 | INFO     | all data control threads have been joined
[2025-06-04 06:27:53] 2025-06-04 10:27:40,699 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:40,701 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:40,868 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:40,908 | INFO     | [job] control thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:40,925 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:40,988 | INFO     | all payload control threads have been joined
[2025-06-04 06:27:53] 2025-06-04 10:27:41,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:27:53] 2025-06-04 10:27:41,267 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:41,280 | INFO     | [data] control thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:41,636 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:41,731 | INFO     | [job] validate thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:41,917 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:41,991 | INFO     | [payload] control thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:42,010 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:42,289 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:27:53] 2025-06-04 10:27:42,292 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:42,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:27:53] 2025-06-04 10:27:43,014 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:43,391 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:46,295 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:27:53] 2025-06-04 10:27:48,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817248687936)>', '<ExcThread(monitor, started 139816612128512)>']
[2025-06-04 06:27:53] 2025-06-04 10:27:48,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:27:53] 2025-06-04 10:27:48,736 | INFO     | [monitor] control thread has ended
[2025-06-04 06:27:53] 2025-06-04 10:27:53,309 | INFO     | all workflow threads have been joined
[2025-06-04 06:27:53] 2025-06-04 10:27:53,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:27:53] 2025-06-04 10:27:53,310 | INFO     | traces error code: 0
[2025-06-04 06:27:53] 2025-06-04 10:27:53,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:27:53] 2025-06-04 10:27:53,459 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:27:53] 2025-06-04 10:27:53,462 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:27:53] 2025-06-04 10:27:53,465 [wrapper] pilotpid: 3685008
[2025-06-04 06:27:53] 2025-06-04 10:27:53,467 [wrapper] Pilot exit status: 0
[2025-06-04 06:27:53] 2025-06-04 10:27:53,477 [wrapper] pandaids: 6678312683
[2025-06-04 06:27:53] 2025-06-04 10:27:53,511 [wrapper] cleanup supervisor_pilot 3819953 3685009
[2025-06-04 06:27:53] 2025-06-04 10:27:53,513 [wrapper] Test setup, not cleaning
[2025-06-04 06:27:53] 2025-06-04 10:27:53,514 [wrapper] apfmon messages muted
[2025-06-04 06:27:53] 2025-06-04 10:27:53,516 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:27:53] 2025-06-04 10:27:53,517 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:27:53]  *** Error codes and diagnostics ***
[2025-06-04 06:27:53]     "exeErrorCode": 0,
[2025-06-04 06:27:53]     "exeErrorDiag": "",
[2025-06-04 06:27:53]     "pilotErrorCode": 0,
[2025-06-04 06:27:53]     "pilotErrorDiag": "",
[2025-06-04 06:27:53]  *** Listing of results directory ***
[2025-06-04 06:27:53] total 389012
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 00:09 queuedata.json
[2025-06-04 06:27:53] -rwx------. 1 boincer umatlas     37140 Jun  4 00:11 runpilot2-wrapper.sh
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas       100 Jun  4 05:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:27:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 05:32 run_atlas
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas       105 Jun  4 05:32 job.xml
[2025-06-04 06:27:53] -rw-r--r--. 2 boincer umatlas 212544672 Jun  4 05:32 EVNT.45006593._002088.pool.root.1
[2025-06-04 06:27:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:32 start_atlas.sh
[2025-06-04 06:27:53] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 05:32 shared
[2025-06-04 06:27:53] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 05:32 input.tar.gz
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas         0 Jun  4 05:32 boinc_lockfile
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 05:32 pandaJob.out
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas    986766 Jun  4 05:32 agis_schedconf.cvmfs.json
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas   1603667 Jun  4 05:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:27:53] drwx------. 4 boincer umatlas      4096 Jun  4 05:32 pilot3
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas      6855 Jun  4 06:21 init_data.xml
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas       529 Jun  4 06:27 boinc_task_state.xml
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas 180737347 Jun  4 06:27 HITS.45006595._052129.pool.root.1
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas        95 Jun  4 06:27 pilot_heartbeat.json
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas      1031 Jun  4 06:27 memory_monitor_summary.json
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas    276116 Jun  4 06:27 log.45006595._052129.job.log.tgz.1
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 06:27 boinc_mmap_file
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas        27 Jun  4 06:27 wrapper_checkpoint.txt
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas      7707 Jun  4 06:27 heartbeat.json
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas      4476 Jun  4 06:27 pilotlog.txt
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas    343615 Jun  4 06:27 log.45006595._052129.job.log.1
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas       357 Jun  4 06:27 output.list
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas       620 Jun  4 06:27 runtime_log
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas    634880 Jun  4 06:27 result.tar.gz
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas       650 Jun  4 06:27 FeCMDmceug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm98mKDmXyHnPo.diag
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 06:27 runtime_log.err
[2025-06-04 06:27:53] -rw-r--r--. 1 boincer umatlas     21339 Jun  4 06:27 stderr.txt
[2025-06-04 06:27:53] HITS file was successfully produced:
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas 180737347 Jun  4 06:27 shared/HITS.pool.root.1
[2025-06-04 06:27:53]  *** Contents of shared directory: ***
[2025-06-04 06:27:53] total 385208
[2025-06-04 06:27:53] -rw-r--r--. 2 boincer umatlas 212544672 Jun  4 05:32 ATLAS.root_0
[2025-06-04 06:27:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:32 start_atlas.sh
[2025-06-04 06:27:53] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 05:32 input.tar.gz
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas 180737347 Jun  4 06:27 HITS.pool.root.1
[2025-06-04 06:27:53] -rw-------. 1 boincer umatlas    634880 Jun  4 06:27 result.tar.gz
06:27:55 (3681390): run_atlas exited; CPU time 21535.310757
06:27:55 (3681390): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN