Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:05:02 (3568134): wrapper (7.7.26015): starting
05:05:02 (3568134): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:05:02] Arguments: --nthreads 8
[2025-06-04 05:05:02] Threads: 8
[2025-06-04 05:05:02] Checking for CVMFS
[2025-06-04 05:05:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:05:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:05:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:05:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:05:03] 2.12.6.0 3074763 23329 330928 146773 1 105 17619724 32935936 19113 16776704 0 60144859 99.623 62622274 10367 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 05:05:03] CVMFS is ok
[2025-06-04 05:05:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:05:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:05:03] Further information can be found at the LHC@home message board.
[2025-06-04 05:05:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:05:03] Checking for apptainer binary...
[2025-06-04 05:05:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:05:03] Running /usr/bin/apptainer --version
[2025-06-04 05:05:03] apptainer version 1.4.1-1.el9
[2025-06-04 05:05:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:05:03] c6-12-25-1.aglt2.org
[2025-06-04 05:05:03] apptainer works
[2025-06-04 05:05:03] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:05:03] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:05:03] Starting ATLAS job with PandaID=6678312695
[2025-06-04 05:05:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:37:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:37:49] 2025-06-04 12:37:33,924 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,926 | INFO     | sum of deviations: 79598619766.00003
[2025-06-04 08:37:49] 2025-06-04 12:37:33,926 | INFO     | mean x: 1749034281.5
[2025-06-04 08:37:49] 2025-06-04 12:37:33,926 | INFO     | mean y: 2061995.326923077
[2025-06-04 08:37:49] 2025-06-04 12:37:33,926 | INFO     | -- intersect: -49891610100.35894
[2025-06-04 08:37:49] 2025-06-04 12:37:33,927 | INFO     | intersect: -49891610100.35894
[2025-06-04 08:37:49] 2025-06-04 12:37:33,927 | INFO     | chi2: 5.4542882505364965
[2025-06-04 08:37:49] 2025-06-04 12:37:33,928 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,930 | INFO     | sum of deviations: 89746462401.99991
[2025-06-04 08:37:49] 2025-06-04 12:37:33,930 | INFO     | mean x: 1749034129.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,930 | INFO     | mean y: 2069696.7044334975
[2025-06-04 08:37:49] 2025-06-04 12:37:33,930 | INFO     | -- intersect: -60512454636.09623
[2025-06-04 08:37:49] 2025-06-04 12:37:33,930 | INFO     | intersect: -60512454636.09623
[2025-06-04 08:37:49] 2025-06-04 12:37:33,931 | INFO     | chi2: 4.691688252479648
[2025-06-04 08:37:49] 2025-06-04 12:37:33,931 | INFO     | current chi2=4.691688252479648 (change=13.981659256491211 %)
[2025-06-04 08:37:49] 2025-06-04 12:37:33,931 | INFO     | right removable region: 202
[2025-06-04 08:37:49] 2025-06-04 12:37:33,932 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,934 | INFO     | sum of deviations: 33809060961.000008
[2025-06-04 08:37:49] 2025-06-04 12:37:33,934 | INFO     | mean x: 1749034434.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,934 | INFO     | mean y: 2097449.1871921183
[2025-06-04 08:37:49] 2025-06-04 12:37:33,934 | INFO     | -- intersect: -22794785505.420277
[2025-06-04 08:37:49] 2025-06-04 12:37:33,934 | INFO     | intersect: -22794785505.420277
[2025-06-04 08:37:49] 2025-06-04 12:37:33,935 | INFO     | chi2: 2.7095343786602264
[2025-06-04 08:37:49] 2025-06-04 12:37:33,935 | INFO     | current chi2=2.7095343786602264 (change=50.32286057867018 %)
[2025-06-04 08:37:49] 2025-06-04 12:37:33,935 | INFO     | sum of square deviations: 2406926989.5
[2025-06-04 08:37:49] 2025-06-04 12:37:33,937 | INFO     | sum of deviations: 5368620552.999996
[2025-06-04 08:37:49] 2025-06-04 12:37:33,937 | INFO     | mean x: 1749034586.5
[2025-06-04 08:37:49] 2025-06-04 12:37:33,938 | INFO     | mean y: 2120624.505050505
[2025-06-04 08:37:49] 2025-06-04 12:37:33,938 | INFO     | -- intersect: -3899079150.1263976
[2025-06-04 08:37:49] 2025-06-04 12:37:33,938 | INFO     | intersect: -3899079150.1263976
[2025-06-04 08:37:49] 2025-06-04 12:37:33,938 | INFO     | chi2: 1.7093194089490322
[2025-06-04 08:37:49] 2025-06-04 12:37:33,938 | INFO     | current chi2=1.7093194089490322 (change=36.91464399155425 %)
[2025-06-04 08:37:49] 2025-06-04 12:37:33,939 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,941 | INFO     | sum of deviations: -17140379630.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,941 | INFO     | mean x: 1749034739.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,941 | INFO     | mean y: 2139931.321243523
[2025-06-04 08:37:49] 2025-06-04 12:37:33,941 | INFO     | -- intersect: 13450836045.127655
[2025-06-04 08:37:49] 2025-06-04 12:37:33,941 | INFO     | intersect: 13450836045.127655
[2025-06-04 08:37:49] 2025-06-04 12:37:33,942 | INFO     | chi2: 1.0504861741654465
[2025-06-04 08:37:49] 2025-06-04 12:37:33,942 | INFO     | current chi2=1.0504861741654465 (change=38.54359994593793 %)
[2025-06-04 08:37:49] 2025-06-04 12:37:33,942 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,944 | INFO     | sum of deviations: -25690641355.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,944 | INFO     | mean x: 1749034891.5
[2025-06-04 08:37:49] 2025-06-04 12:37:33,944 | INFO     | mean y: 2147594.861702128
[2025-06-04 08:37:49] 2025-06-04 12:37:33,945 | INFO     | -- intersect: 21811046318.841393
[2025-06-04 08:37:49] 2025-06-04 12:37:33,945 | INFO     | intersect: 21811046318.841393
[2025-06-04 08:37:49] 2025-06-04 12:37:33,945 | INFO     | chi2: 0.8948449854213398
[2025-06-04 08:37:49] 2025-06-04 12:37:33,945 | INFO     | current chi2=0.8948449854213398 (change=14.816110156590595 %)
[2025-06-04 08:37:49] 2025-06-04 12:37:33,945 | INFO     | left removable region: 40
[2025-06-04 08:37:49] 2025-06-04 12:37:33,946 | INFO     | sum of square deviations: 1318277740.5
[2025-06-04 08:37:49] 2025-06-04 12:37:33,947 | INFO     | sum of deviations: -10857339431.0
[2025-06-04 08:37:49] 2025-06-04 12:37:33,947 | INFO     | mean x: 1749035318.5
[2025-06-04 08:37:49] 2025-06-04 12:37:33,947 | INFO     | mean y: 2154479.012345679
[2025-06-04 08:37:49] 2025-06-04 12:37:33,948 | INFO     | -- intersect: 14407214616.46044
[2025-06-04 08:37:49] 2025-06-04 12:37:33,948 | INFO     | intersect: 14407214616.46044
[2025-06-04 08:37:49] 2025-06-04 12:37:33,948 | INFO     | chi2: 0.09147516774781791
[2025-06-04 08:37:49] 2025-06-04 12:37:33,948 | INFO     | -- intersect: 14407214616.46044
[2025-06-04 08:37:49] 2025-06-04 12:37:33,949 | INFO     | current memory leak: -8.24 B/s (using 162 data points, chi2=0.09)
[2025-06-04 08:37:49] 2025-06-04 12:37:33,949 | INFO     | ..............................
[2025-06-04 08:37:49] 2025-06-04 12:37:33,950 | INFO     | . Timing measurements:
[2025-06-04 08:37:49] 2025-06-04 12:37:33,950 | INFO     | . get job = 0 s
[2025-06-04 08:37:49] 2025-06-04 12:37:33,950 | INFO     | . initial setup = 4 s
[2025-06-04 08:37:49] 2025-06-04 12:37:33,950 | INFO     | . payload setup = 14 s
[2025-06-04 08:37:49] 2025-06-04 12:37:33,950 | INFO     | . stage-in = 0 s
[2025-06-04 08:37:49] 2025-06-04 12:37:33,950 | INFO     | . payload execution = 12667 s
[2025-06-04 08:37:49] 2025-06-04 12:37:33,950 | INFO     | . stage-out = 11 s
[2025-06-04 08:37:49] 2025-06-04 12:37:33,950 | INFO     | . log creation = 0 s
[2025-06-04 08:37:49] 2025-06-04 12:37:33,951 | INFO     | ..............................
[2025-06-04 08:37:49] 2025-06-04 12:37:34,108 | INFO     | 
[2025-06-04 08:37:49] 2025-06-04 12:37:34,108 | INFO     | job summary report
[2025-06-04 08:37:49] 2025-06-04 12:37:34,109 | INFO     | --------------------------------------------------
[2025-06-04 08:37:49] 2025-06-04 12:37:34,109 | INFO     | PanDA job id: 6678312695
[2025-06-04 08:37:49] 2025-06-04 12:37:34,109 | INFO     | task id: 45006595
[2025-06-04 08:37:49] 2025-06-04 12:37:34,109 | INFO     | errors: (none)
[2025-06-04 08:37:49] 2025-06-04 12:37:34,109 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:37:49] 2025-06-04 12:37:34,110 | INFO     | pilot state: finished 
[2025-06-04 08:37:49] 2025-06-04 12:37:34,110 | INFO     | transexitcode: 0
[2025-06-04 08:37:49] 2025-06-04 12:37:34,110 | INFO     | exeerrorcode: 0
[2025-06-04 08:37:49] 2025-06-04 12:37:34,110 | INFO     | exeerrordiag: 
[2025-06-04 08:37:49] 2025-06-04 12:37:34,110 | INFO     | exitcode: 0
[2025-06-04 08:37:49] 2025-06-04 12:37:34,111 | INFO     | exitmsg: OK
[2025-06-04 08:37:49] 2025-06-04 12:37:34,111 | INFO     | cpuconsumptiontime: 87785 s
[2025-06-04 08:37:49] 2025-06-04 12:37:34,111 | INFO     | nevents: 400
[2025-06-04 08:37:49] 2025-06-04 12:37:34,111 | INFO     | neventsw: 0
[2025-06-04 08:37:49] 2025-06-04 12:37:34,111 | INFO     | pid: 3588108
[2025-06-04 08:37:49] 2025-06-04 12:37:34,111 | INFO     | pgrp: 3588108
[2025-06-04 08:37:49] 2025-06-04 12:37:34,112 | INFO     | corecount: 8
[2025-06-04 08:37:49] 2025-06-04 12:37:34,112 | INFO     | event service: False
[2025-06-04 08:37:49] 2025-06-04 12:37:34,112 | INFO     | sizes: {0: 2404957, 1: 2405212, 2: 2405240, 10: 2405446, 13: 2405474, 12685: 2435564, 12686: 2435691, 12699: 2445967, 12710: 2445911}
[2025-06-04 08:37:49] 2025-06-04 12:37:34,112 | INFO     | --------------------------------------------------
[2025-06-04 08:37:49] 2025-06-04 12:37:34,112 | INFO     | 
[2025-06-04 08:37:49] 2025-06-04 12:37:34,113 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 08:37:49] 2025-06-04 12:37:34,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,153 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,153 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:37:49] 2025-06-04 12:37:34,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:37:49] 2025-06-04 12:37:34,157 | INFO     | job 6678312695 has completed (purged errors)
[2025-06-04 08:37:49] 2025-06-04 12:37:34,158 | INFO     | overall cleanup function is called
[2025-06-04 08:37:49] 2025-06-04 12:37:35,168 | INFO     | --- collectZombieJob: --- 10, [3588108]
[2025-06-04 08:37:49] 2025-06-04 12:37:35,169 | INFO     | zombie collector waiting for pid 3588108
[2025-06-04 08:37:49] 2025-06-04 12:37:35,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:37:49] 2025-06-04 12:37:35,170 | INFO     | collected zombie processes
[2025-06-04 08:37:49] 2025-06-04 12:37:35,170 | INFO     | will attempt to kill all subprocesses of pid=3588108
[2025-06-04 08:37:49] 2025-06-04 12:37:36,073 | INFO     | process IDs to be killed: [3588108] (in reverse order)
[2025-06-04 08:37:49] 2025-06-04 12:37:36,307 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:37:49] 2025-06-04 12:37:36,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:37:49] 2025-06-04 12:37:36,342 | INFO     | did not find any defunct processes belonging to 3588108
[2025-06-04 08:37:49] 2025-06-04 12:37:36,374 | INFO     | did not find any defunct processes belonging to 3588108
[2025-06-04 08:37:49] 2025-06-04 12:37:36,375 | INFO     | ready for new job
[2025-06-04 08:37:49] 2025-06-04 12:37:36,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:37:49] 2025-06-04 12:37:36,379 | INFO     | **************************************
[2025-06-04 08:37:49] 2025-06-04 12:37:36,379 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:37:49] 2025-06-04 12:37:36,380 | INFO     | **************************************
[2025-06-04 08:37:49] 2025-06-04 12:37:36,380 | INFO     | 
[2025-06-04 08:37:49] 2025-06-04 12:37:36,407 | INFO     | architecture information:
[2025-06-04 08:37:49] 2025-06-04 12:37:36,408 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:37:49] 2025-06-04 12:37:36,439 | INFO     | cat /etc/os-release:
[2025-06-04 08:37:49] NAME="CentOS Linux"
[2025-06-04 08:37:49] VERSION="7 (Core)"
[2025-06-04 08:37:49] ID="centos"
[2025-06-04 08:37:49] ID_LIKE="rhel fedora"
[2025-06-04 08:37:49] VERSION_ID="7"
[2025-06-04 08:37:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:37:49] ANSI_COLOR="0;31"
[2025-06-04 08:37:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:37:49] HOME_URL="https://www.centos.org/"
[2025-06-04 08:37:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:37:49] 
[2025-06-04 08:37:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:37:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:37:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:37:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:37:49] 
[2025-06-04 08:37:49] 2025-06-04 12:37:36,439 | INFO     | **************************************
[2025-06-04 08:37:49] 2025-06-04 12:37:36,942 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 08:37:49] 2025-06-04 12:37:36,975 | INFO     | sufficient remaining disk space (75609669632 B)
[2025-06-04 08:37:49] 2025-06-04 12:37:36,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:37:49] 2025-06-04 12:37:36,976 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:37:49] 2025-06-04 12:37:36,976 | INFO     | update_server=False
[2025-06-04 08:37:49] 2025-06-04 12:37:36,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:37:49] 2025-06-04 12:37:36,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:37:49] 2025-06-04 12:37:37,067 | INFO     | all data control threads have been joined
[2025-06-04 08:37:49] 2025-06-04 12:37:37,697 | INFO     | all payload control threads have been joined
[2025-06-04 08:37:49] 2025-06-04 12:37:37,754 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:37:49] 2025-06-04 12:37:37,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:37:49] 2025-06-04 12:37:37,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:37:49] 2025-06-04 12:37:37,911 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:37:49] 2025-06-04 12:37:37,912 | INFO     | aborting loop
[2025-06-04 08:37:49] 2025-06-04 12:37:37,980 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:38,001 | INFO     | all job control threads have been joined
[2025-06-04 08:37:49] 2025-06-04 12:37:38,036 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:38,048 | INFO     | [job] validate thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:38,073 | INFO     | [data] control thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:38,314 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:38,348 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:38,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:37:49] 2025-06-04 12:37:38,703 | INFO     | [payload] control thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:38,868 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:38,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:38,918 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:38,983 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:39,007 | INFO     | [job] control thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:39,049 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:39,074 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:39,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:37:49] 2025-06-04 12:37:40,124 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:42,549 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:37:49] 2025-06-04 12:37:43,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140527054894912)>', '<ExcThread(monitor, started 140526430975744)>']
[2025-06-04 08:37:49] 2025-06-04 12:37:44,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:37:49] 2025-06-04 12:37:44,795 | INFO     | [monitor] control thread has ended
[2025-06-04 08:37:49] 2025-06-04 12:37:48,945 | INFO     | all workflow threads have been joined
[2025-06-04 08:37:49] 2025-06-04 12:37:48,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:37:49] 2025-06-04 12:37:48,947 | INFO     | traces error code: 0
[2025-06-04 08:37:49] 2025-06-04 12:37:48,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:37:49] 2025-06-04 12:37:49,174 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:37:49] 2025-06-04 12:37:49,180 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:37:49] 2025-06-04 12:37:49,185 [wrapper] pilotpid: 3573304
[2025-06-04 08:37:49] 2025-06-04 12:37:49,191 [wrapper] Pilot exit status: 0
[2025-06-04 08:37:49] 2025-06-04 12:37:49,218 [wrapper] pandaids: 6678312695
[2025-06-04 08:37:49] 2025-06-04 12:37:49,398 [wrapper] cleanup supervisor_pilot   24682 3573306
[2025-06-04 08:37:49] 2025-06-04 12:37:49,404 [wrapper] Test setup, not cleaning
[2025-06-04 08:37:49] 2025-06-04 12:37:49,411 [wrapper] apfmon messages muted
[2025-06-04 08:37:49] 2025-06-04 12:37:49,417 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:37:49] 2025-06-04 12:37:49,422 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:37:49]  *** Error codes and diagnostics ***
[2025-06-04 08:37:49]     "exeErrorCode": 0,
[2025-06-04 08:37:49]     "exeErrorDiag": "",
[2025-06-04 08:37:49]     "pilotErrorCode": 0,
[2025-06-04 08:37:49]     "pilotErrorDiag": "",
[2025-06-04 08:37:49]  *** Listing of results directory ***
[2025-06-04 08:37:49] total 390704
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 08:37:49] -rwx------. 1 boincer umatlas     37140 Jun  4 00:12 runpilot2-wrapper.sh
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 00:12 queuedata.json
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas       100 Jun  4 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:37:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 05:04 run_atlas
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas       105 Jun  4 05:04 job.xml
[2025-06-04 08:37:49] -rw-r--r--. 2 boincer umatlas 212544672 Jun  4 05:05 EVNT.45006593._002088.pool.root.1
[2025-06-04 08:37:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:05 start_atlas.sh
[2025-06-04 08:37:49] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 05:05 shared
[2025-06-04 08:37:49] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 05:05 input.tar.gz
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas         0 Jun  4 05:05 boinc_lockfile
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 05:05 pandaJob.out
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas    986774 Jun  4 05:05 agis_schedconf.cvmfs.json
[2025-06-04 08:37:49] drwx------. 4 boincer umatlas      4096 Jun  4 05:05 pilot3
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas      6858 Jun  4 08:29 init_data.xml
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas 180672568 Jun  4 08:35 HITS.45006595._052141.pool.root.1
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas       530 Jun  4 08:35 boinc_task_state.xml
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas      1042 Jun  4 08:37 memory_monitor_summary.json
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas        95 Jun  4 08:37 pilot_heartbeat.json
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas   1598969 Jun  4 08:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas    389529 Jun  4 08:37 log.45006595._052141.job.log.tgz.1
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas      7731 Jun  4 08:37 heartbeat.json
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 08:37 boinc_mmap_file
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas        28 Jun  4 08:37 wrapper_checkpoint.txt
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas      4353 Jun  4 08:37 pilotlog.txt
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas   1123375 Jun  4 08:37 log.45006595._052141.job.log.1
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas       357 Jun  4 08:37 output.list
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas       620 Jun  4 08:37 runtime_log
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas   1536000 Jun  4 08:37 result.tar.gz
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas      8670 Jun  4 08:37 runtime_log.err
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas       658 Jun  4 08:37 NCBMDmlfug7n9Rq4apOajLDm4fhM0noT9bVof3QYDmKfaKDm3Jp1dn.diag
[2025-06-04 08:37:49] -rw-r--r--. 1 boincer umatlas     20735 Jun  4 08:37 stderr.txt
[2025-06-04 08:37:49] HITS file was successfully produced:
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas 180672568 Jun  4 08:35 shared/HITS.pool.root.1
[2025-06-04 08:37:49]  *** Contents of shared directory: ***
[2025-06-04 08:37:49] total 386028
[2025-06-04 08:37:49] -rw-r--r--. 2 boincer umatlas 212544672 Jun  4 05:05 ATLAS.root_0
[2025-06-04 08:37:49] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 05:05 start_atlas.sh
[2025-06-04 08:37:49] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 05:05 input.tar.gz
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas 180672568 Jun  4 08:35 HITS.pool.root.1
[2025-06-04 08:37:49] -rw-------. 1 boincer umatlas   1536000 Jun  4 08:37 result.tar.gz
08:37:51 (3568134): run_atlas exited; CPU time 89002.689653
08:37:51 (3568134): called boinc_finish(0)

</stderr_txt>
]]>

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