Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:00:10 (22693): wrapper (7.7.26015): starting
18:00:10 (22693): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:00:10] Arguments: --nthreads 8
[2025-06-04 18:00:10] Threads: 8
[2025-06-04 18:00:10] Checking for CVMFS
[2025-06-04 18:00:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:00:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:00:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:00:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:00:12] 2.11.2.0 25755 33601 100500 146786 2 60 19518778 25165824 3521 130560 0 18859210 99.799 18617692 2379 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:00:12] CVMFS is ok
[2025-06-04 18:00:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:00:12] Checking for apptainer binary...
[2025-06-04 18:00:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:00:12] Running /usr/bin/apptainer --version
[2025-06-04 18:00:12] apptainer version 1.3.2-1.el7
[2025-06-04 18:00:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:13:10] cg-vwn458.simple-grid.lan
[2025-06-04 18:13:10] apptainer works
[2025-06-04 18:13:10] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:13:10] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:13:10] Starting ATLAS job with PandaID=6678245536
[2025-06-04 18:13:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:48:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:48:49] 2025-06-04 19:43:57,072 | INFO     | extracted standard info from prmon json
[2025-06-04 21:48:49] 2025-06-04 19:43:57,072 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:48:49] 2025-06-04 19:43:57,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:48:49] 2025-06-04 19:43:57,073 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:48:49] 2025-06-04 19:43:57,073 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:48:49] 2025-06-04 19:43:57,077 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:48:49] 2025-06-04 19:43:57,077 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,079 | INFO     | sum of deviations: 44924117828.00001
[2025-06-04 21:48:49] 2025-06-04 19:43:57,079 | INFO     | mean x: 1749060188.0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,079 | INFO     | mean y: 2442756.066666667
[2025-06-04 21:48:49] 2025-06-04 19:43:57,079 | INFO     | -- intersect: -34172946947.059402
[2025-06-04 21:48:49] 2025-06-04 19:43:57,079 | INFO     | intersect: -34172946947.059402
[2025-06-04 21:48:49] 2025-06-04 19:43:57,079 | INFO     | chi2: 7.418998862010841
[2025-06-04 21:48:49] 2025-06-04 19:43:57,080 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 21:48:49] 2025-06-04 19:43:57,081 | INFO     | sum of deviations: 56794384646.000015
[2025-06-04 21:48:49] 2025-06-04 19:43:57,081 | INFO     | mean x: 1749060035.5
[2025-06-04 21:48:49] 2025-06-04 19:43:57,081 | INFO     | mean y: 2453022.6
[2025-06-04 21:48:49] 2025-06-04 19:43:57,082 | INFO     | -- intersect: -46704648648.42677
[2025-06-04 21:48:49] 2025-06-04 19:43:57,082 | INFO     | intersect: -46704648648.42677
[2025-06-04 21:48:49] 2025-06-04 19:43:57,082 | INFO     | chi2: 6.734671848094795
[2025-06-04 21:48:49] 2025-06-04 19:43:57,082 | INFO     | current chi2=6.734671848094795 (change=9.22398057533286 %)
[2025-06-04 21:48:49] 2025-06-04 19:43:57,082 | INFO     | right removable region: 189
[2025-06-04 21:48:49] 2025-06-04 19:43:57,083 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 21:48:49] 2025-06-04 19:43:57,084 | INFO     | sum of deviations: -22559834167.000004
[2025-06-04 21:48:49] 2025-06-04 19:43:57,084 | INFO     | mean x: 1749060340.5
[2025-06-04 21:48:49] 2025-06-04 19:43:57,084 | INFO     | mean y: 2502405.2315789475
[2025-06-04 21:48:49] 2025-06-04 19:43:57,084 | INFO     | -- intersect: 18555474823.748898
[2025-06-04 21:48:49] 2025-06-04 19:43:57,084 | INFO     | intersect: 18555474823.748898
[2025-06-04 21:48:49] 2025-06-04 19:43:57,085 | INFO     | chi2: 2.4262429233318525
[2025-06-04 21:48:49] 2025-06-04 19:43:57,085 | INFO     | current chi2=2.4262429233318525 (change=67.2968958688552 %)
[2025-06-04 21:48:49] 2025-06-04 19:43:57,085 | INFO     | sum of square deviations: 1963274020.0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,086 | INFO     | sum of deviations: -55447472987.0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,086 | INFO     | mean x: 1749060493.0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,086 | INFO     | mean y: 2532836.535135135
[2025-06-04 21:48:49] 2025-06-04 19:43:57,087 | INFO     | -- intersect: 49400112313.620255
[2025-06-04 21:48:49] 2025-06-04 19:43:57,087 | INFO     | intersect: 49400112313.620255
[2025-06-04 21:48:49] 2025-06-04 19:43:57,087 | INFO     | chi2: 0.9751107139219268
[2025-06-04 21:48:49] 2025-06-04 19:43:57,087 | INFO     | current chi2=0.9751107139219268 (change=59.809848200078406 %)
[2025-06-04 21:48:49] 2025-06-04 19:43:57,087 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,095 | INFO     | sum of deviations: -52327646958.0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,095 | INFO     | mean x: 1749060645.5
[2025-06-04 21:48:49] 2025-06-04 19:43:57,095 | INFO     | mean y: 2529725.966666667
[2025-06-04 21:48:49] 2025-06-04 19:43:57,095 | INFO     | -- intersect: 50614534372.54213
[2025-06-04 21:48:49] 2025-06-04 19:43:57,095 | INFO     | intersect: 50614534372.54213
[2025-06-04 21:48:49] 2025-06-04 19:43:57,096 | INFO     | chi2: 0.9655083795958966
[2025-06-04 21:48:49] 2025-06-04 19:43:57,096 | INFO     | current chi2=0.9655083795958966 (change=0.9847429824054843 %)
[2025-06-04 21:48:49] 2025-06-04 19:43:57,096 | INFO     | left removable region: 30
[2025-06-04 21:48:49] 2025-06-04 19:43:57,096 | INFO     | sum of square deviations: 1246386160.0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,097 | INFO     | sum of deviations: -22561721812.0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,097 | INFO     | mean x: 1749060920.0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,097 | INFO     | mean y: 2524476.65408805
[2025-06-04 21:48:49] 2025-06-04 19:43:57,097 | INFO     | -- intersect: 31663519420.051716
[2025-06-04 21:48:49] 2025-06-04 19:43:57,098 | INFO     | intersect: 31663519420.051716
[2025-06-04 21:48:49] 2025-06-04 19:43:57,098 | INFO     | chi2: 0.146725336268634
[2025-06-04 21:48:49] 2025-06-04 19:43:57,098 | INFO     | -- intersect: 31663519420.051716
[2025-06-04 21:48:49] 2025-06-04 19:43:57,098 | INFO     | current memory leak: -18.10 B/s (using 159 data points, chi2=0.15)
[2025-06-04 21:48:49] 2025-06-04 19:43:57,099 | INFO     | ..............................
[2025-06-04 21:48:49] 2025-06-04 19:43:57,099 | INFO     | . Timing measurements:
[2025-06-04 21:48:49] 2025-06-04 19:43:57,099 | INFO     | . get job = 0 s
[2025-06-04 21:48:49] 2025-06-04 19:43:57,099 | INFO     | . initial setup = 8 s
[2025-06-04 21:48:49] 2025-06-04 19:43:57,099 | INFO     | . payload setup = 151 s
[2025-06-04 21:48:49] 2025-06-04 19:43:57,099 | INFO     | . stage-in = 0 s
[2025-06-04 21:48:49] 2025-06-04 19:43:57,099 | INFO     | . payload execution = 12013 s
[2025-06-04 21:48:49] 2025-06-04 19:43:57,100 | INFO     | . stage-out = 3 s
[2025-06-04 21:48:49] 2025-06-04 19:43:57,100 | INFO     | . log creation = 0 s
[2025-06-04 21:48:49] 2025-06-04 19:43:57,100 | INFO     | ..............................
[2025-06-04 21:48:49] 2025-06-04 19:43:57,277 | INFO     | 
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | job summary report
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | --------------------------------------------------
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | PanDA job id: 6678245536
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | task id: 45006595
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | errors: (none)
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | pilot state: finished 
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | transexitcode: 0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | exeerrorcode: 0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | exeerrordiag: 
[2025-06-04 21:48:49] 2025-06-04 19:43:57,278 | INFO     | exitcode: 0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | exitmsg: OK
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | cpuconsumptiontime: 44623 s
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | nevents: 400
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | neventsw: 0
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | pid: 11368
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | pgrp: 11368
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | corecount: 8
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | event service: False
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | sizes: {0: 2396514, 1: 2397371, 2: 2397371, 12: 2397399, 23: 2397427, 34: 2397455, 45: 2397611, 55: 2397639, 66: 2397667, 77: 2397695, 87: 2397751, 91: 2398265, 98
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | --------------------------------------------------
[2025-06-04 21:48:49] 2025-06-04 19:43:57,279 | INFO     | 
[2025-06-04 21:48:49] 2025-06-04 19:43:57,280 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-04 21:48:49] 2025-06-04 19:43:57,803 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,805 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:48:49] 2025-06-04 19:43:57,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,805 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:48:49] 2025-06-04 19:43:57,805 | INFO     | job 6678245536 has completed (purged errors)
[2025-06-04 21:48:49] 2025-06-04 19:43:57,805 | INFO     | overall cleanup function is called
[2025-06-04 21:48:49] 2025-06-04 19:43:58,814 | INFO     | --- collectZombieJob: --- 10, [11368]
[2025-06-04 21:48:49] 2025-06-04 19:43:58,815 | INFO     | zombie collector waiting for pid 11368
[2025-06-04 21:48:49] 2025-06-04 19:43:58,815 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:48:49] 2025-06-04 19:43:58,815 | INFO     | collected zombie processes
[2025-06-04 21:48:49] 2025-06-04 19:43:58,815 | INFO     | will attempt to kill all subprocesses of pid=11368
[2025-06-04 21:48:49] 2025-06-04 19:43:58,941 | INFO     | process IDs to be killed: [11368] (in reverse order)
[2025-06-04 21:48:49] 2025-06-04 19:43:59,711 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:48:49] 2025-06-04 19:43:59,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:48:49] 2025-06-04 19:43:59,715 | INFO     | did not find any defunct processes belonging to 11368
[2025-06-04 21:48:49] 2025-06-04 19:43:59,718 | INFO     | did not find any defunct processes belonging to 11368
[2025-06-04 21:48:49] 2025-06-04 19:43:59,718 | INFO     | ready for new job
[2025-06-04 21:48:49] 2025-06-04 19:43:59,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:48:49] 2025-06-04 19:43:59,720 | INFO     | **************************************
[2025-06-04 21:48:49] 2025-06-04 19:43:59,720 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:48:49] 2025-06-04 19:43:59,720 | INFO     | **************************************
[2025-06-04 21:48:49] 2025-06-04 19:43:59,720 | INFO     | 
[2025-06-04 21:48:49] 2025-06-04 19:43:59,721 | INFO     | pilot is running in a VM
[2025-06-04 21:48:49] 2025-06-04 19:43:59,721 | INFO     | architecture information:
[2025-06-04 21:48:49] 2025-06-04 19:43:59,738 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:48:49] 2025-06-04 19:44:00,056 | INFO     | cat /etc/os-release:
[2025-06-04 21:48:49] NAME="CentOS Linux"
[2025-06-04 21:48:49] VERSION="7 (Core)"
[2025-06-04 21:48:49] ID="centos"
[2025-06-04 21:48:49] ID_LIKE="rhel fedora"
[2025-06-04 21:48:49] VERSION_ID="7"
[2025-06-04 21:48:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:48:49] ANSI_COLOR="0;31"
[2025-06-04 21:48:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:48:49] HOME_URL="https://www.centos.org/"
[2025-06-04 21:48:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:48:49] 
[2025-06-04 21:48:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:48:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:48:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:48:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:48:49] 
[2025-06-04 21:48:49] 2025-06-04 19:44:00,056 | INFO     | **************************************
[2025-06-04 21:48:49] 2025-06-04 19:44:00,559 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-04 21:48:49] 2025-06-04 19:44:00,820 | INFO     | sufficient remaining disk space (496805871616 B)
[2025-06-04 21:48:49] 2025-06-04 19:44:00,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:48:49] 2025-06-04 19:44:00,820 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:48:49] 2025-06-04 19:44:00,821 | INFO     | update_server=False
[2025-06-04 21:48:49] 2025-06-04 19:44:00,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:48:49] 2025-06-04 19:44:00,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:48:49] 2025-06-04 19:44:00,823 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:48:49] 2025-06-04 19:44:00,824 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:48:49] 2025-06-04 19:44:00,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:48:49] 2025-06-04 19:44:00,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:48:49] 2025-06-04 19:44:00,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:48:49] 2025-06-04 19:44:00,849 | INFO     | aborting loop
[2025-06-04 21:48:49] 2025-06-04 19:44:01,019 | INFO     | all payload control threads have been joined
[2025-06-04 21:48:49] 2025-06-04 19:44:01,098 | INFO     | all data control threads have been joined
[2025-06-04 21:48:49] 2025-06-04 19:44:01,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:48:49] 2025-06-04 19:44:01,684 | INFO     | all job control threads have been joined
[2025-06-04 21:48:49] 2025-06-04 19:44:01,826 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:01,851 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:01,855 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:01,981 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:02,025 | INFO     | [payload] control thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:02,103 | INFO     | [data] control thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:02,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:48:49] 2025-06-04 19:44:02,491 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:02,544 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:02,690 | INFO     | [job] control thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:02,740 | INFO     | [job] validate thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:02,828 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:02,830 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:02,911 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:03,264 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:03,302 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:05,659 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:48:49] 2025-06-04 19:44:06,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430929778496)>', '<ExcThread(monitor, started 140430633056000)>']
[2025-06-04 21:48:49] 2025-06-04 19:44:06,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:48:49] 2025-06-04 19:44:06,859 | INFO     | [monitor] control thread has ended
[2025-06-04 21:48:49] 2025-06-04 19:44:11,847 | INFO     | all workflow threads have been joined
[2025-06-04 21:48:49] 2025-06-04 19:44:11,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:48:49] 2025-06-04 19:44:11,848 | INFO     | traces error code: 0
[2025-06-04 21:48:49] 2025-06-04 19:44:11,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:48:49] 2025-06-04 19:44:12,183 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:48:49] 2025-06-04 19:44:12,232 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:48:49] 2025-06-04 19:44:12,285 [wrapper] pilotpid: 2747
[2025-06-04 21:48:49] 2025-06-04 19:44:12,348 [wrapper] Pilot exit status: 0
[2025-06-04 21:48:49] 2025-06-04 19:44:12,880 [wrapper] pandaids: 6678245536
[2025-06-04 21:48:49] 2025-06-04 19:44:13,604 [wrapper] cleanup supervisor_pilot  3442 2748
[2025-06-04 21:48:49] 2025-06-04 19:44:13,658 [wrapper] Test setup, not cleaning
[2025-06-04 21:48:49] 2025-06-04 19:44:13,752 [wrapper] apfmon messages muted
[2025-06-04 21:48:49] 2025-06-04 19:44:13,841 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:48:49] 2025-06-04 19:44:13,880 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:48:49]  *** Error codes and diagnostics ***
[2025-06-04 21:48:49]     "exeErrorCode": 0,
[2025-06-04 21:48:49]     "exeErrorDiag": "",
[2025-06-04 21:48:49]     "pilotErrorCode": 0,
[2025-06-04 21:48:49]     "pilotErrorDiag": "",
[2025-06-04 21:48:49]  *** Listing of results directory ***
[2025-06-04 21:48:49] total 389032
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc    495897 Jun  4 02:59 pilot3.tar.gz
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc      5111 Jun  4 03:08 queuedata.json
[2025-06-04 21:48:49] -rwx------. 1 boinc boinc     37140 Jun  4 03:09 runpilot2-wrapper.sh
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:48:49] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:00 run_atlas
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:00 job.xml
[2025-06-04 21:48:49] -rw-r--r--. 2 boinc boinc 214421936 Jun  4 18:00 EVNT.45006593._001994.pool.root.1
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc      6392 Jun  4 18:00 init_data.xml
[2025-06-04 21:48:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:00 start_atlas.sh
[2025-06-04 21:48:49] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:00 shared
[2025-06-04 21:48:49] -rw-r--r--. 2 boinc boinc    508885 Jun  4 18:00 input.tar.gz
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:00 boinc_lockfile
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc      2525 Jun  4 18:13 pandaJob.out
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc    990984 Jun  4 18:16 agis_schedconf.cvmfs.json
[2025-06-04 21:48:49] drwx------. 4 boinc boinc      4096 Jun  4 18:16 pilot3
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc 177254397 Jun  4 21:41 HITS.45006595._049735.pool.root.1
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc       531 Jun  4 21:41 boinc_task_state.xml
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc      1014 Jun  4 21:42 memory_monitor_summary.json
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc   1598969 Jun  4 21:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc    369936 Jun  4 21:42 log.45006595._049735.job.log.tgz.1
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc        95 Jun  4 21:43 pilot_heartbeat.json
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc      7693 Jun  4 21:43 heartbeat.json
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc      4540 Jun  4 21:44 pilotlog.txt
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc   1067281 Jun  4 21:44 log.45006595._049735.job.log.1
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc       357 Jun  4 21:44 output.list
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc       620 Jun  4 21:44 runtime_log
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc   1454080 Jun  4 21:44 result.tar.gz
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc      8673 Jun  4 21:44 runtime_log.err
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc       657 Jun  4 21:44 8ERNDmIorg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmykmKDmvX43lm.diag
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:48 boinc_mmap_file
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc        28 Jun  4 21:48 wrapper_checkpoint.txt
[2025-06-04 21:48:49] -rw-r--r--. 1 boinc boinc     20501 Jun  4 21:48 stderr.txt
[2025-06-04 21:48:49] HITS file was successfully produced:
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc 177254397 Jun  4 21:41 shared/HITS.pool.root.1
[2025-06-04 21:48:49]  *** Contents of shared directory: ***
[2025-06-04 21:48:49] total 384436
[2025-06-04 21:48:49] -rw-r--r--. 2 boinc boinc 214421936 Jun  4 18:00 ATLAS.root_0
[2025-06-04 21:48:49] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:00 start_atlas.sh
[2025-06-04 21:48:49] -rw-r--r--. 2 boinc boinc    508885 Jun  4 18:00 input.tar.gz
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc 177254397 Jun  4 21:41 HITS.pool.root.1
[2025-06-04 21:48:49] -rw-------. 1 boinc boinc   1454080 Jun  4 21:44 result.tar.gz
21:48:51 (22693): run_atlas exited; CPU time 44788.004943
21:48:51 (22693): called boinc_finish(0)

</stderr_txt>
]]>

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