Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:39:51 (5463): wrapper (7.7.26015): starting
01:39:51 (5463): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:39:51] Arguments: --nthreads 8
[2025-06-05 01:39:51] Threads: 8
[2025-06-05 01:39:51] Checking for CVMFS
[2025-06-05 01:39:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:39:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:39:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:39:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:39:53] 2.11.2.0 14372 33867 97928 146798 3 159 14069007 25165825 2084 130560 0 17468525 99.825 19826474 2202 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 01:39:53] CVMFS is ok
[2025-06-05 01:39:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:39:53] Checking for apptainer binary...
[2025-06-05 01:39:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:39:53] Running /usr/bin/apptainer --version
[2025-06-05 01:39:53] apptainer version 1.3.2-1.el7
[2025-06-05 01:39:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:39:56] cg-vwn440.simple-grid.lan
[2025-06-05 01:39:56] apptainer works
[2025-06-05 01:39:56] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:39:56] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:39:56] Starting ATLAS job with PandaID=6678287290
[2025-06-05 01:39:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:50:52]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:50:52] 2025-06-05 03:32:24,695 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:50:52] 2025-06-05 03:32:24,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:50:52] 2025-06-05 03:32:24,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:50:52] 2025-06-05 03:32:24,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:50:52] 2025-06-05 03:32:24,700 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:50:52] 2025-06-05 03:32:24,701 | INFO     | sum of square deviations: 3579276412.5
[2025-06-05 06:50:52] 2025-06-05 03:32:24,703 | INFO     | sum of deviations: -13542548786.49999
[2025-06-05 06:50:52] 2025-06-05 03:32:24,703 | INFO     | mean x: 1749087352.5
[2025-06-05 06:50:52] 2025-06-05 03:32:24,703 | INFO     | mean y: 2489054.597345133
[2025-06-05 06:50:52] 2025-06-05 03:32:24,703 | INFO     | -- intersect: 6620335254.001862
[2025-06-05 06:50:52] 2025-06-05 03:32:24,703 | INFO     | intersect: 6620335254.001862
[2025-06-05 06:50:52] 2025-06-05 03:32:24,704 | INFO     | chi2: 2.5224246170216293
[2025-06-05 06:50:52] 2025-06-05 03:32:24,704 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,706 | INFO     | sum of deviations: 1506869579.9999983
[2025-06-05 06:50:52] 2025-06-05 03:32:24,706 | INFO     | mean x: 1749087200.0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,706 | INFO     | mean y: 2498756.9366515838
[2025-06-05 06:50:52] 2025-06-05 03:32:24,706 | INFO     | -- intersect: -784983494.4951288
[2025-06-05 06:50:52] 2025-06-05 03:32:24,707 | INFO     | intersect: -784983494.4951288
[2025-06-05 06:50:52] 2025-06-05 03:32:24,707 | INFO     | chi2: 1.7588510378281665
[2025-06-05 06:50:52] 2025-06-05 03:32:24,707 | INFO     | current chi2=1.7588510378281665 (change=30.271413228398387 %)
[2025-06-05 06:50:52] 2025-06-05 03:32:24,707 | INFO     | sum of square deviations: 3124858590.0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,710 | INFO     | sum of deviations: 1569544762.000001
[2025-06-05 06:50:52] 2025-06-05 03:32:24,710 | INFO     | mean x: 1749087047.5
[2025-06-05 06:50:52] 2025-06-05 03:32:24,710 | INFO     | mean y: 2498801.314814815
[2025-06-05 06:50:52] 2025-06-05 03:32:24,710 | INFO     | -- intersect: -876027485.4333072
[2025-06-05 06:50:52] 2025-06-05 03:32:24,710 | INFO     | intersect: -876027485.4333072
[2025-06-05 06:50:52] 2025-06-05 03:32:24,711 | INFO     | chi2: 1.7591161654323866
[2025-06-05 06:50:52] 2025-06-05 03:32:24,711 | INFO     | current chi2=1.7591161654323866 (change=-0.015073908962035762 %)
[2025-06-05 06:50:52] 2025-06-05 03:32:24,711 | INFO     | right removable region: 215
[2025-06-05 06:50:52] 2025-06-05 03:32:24,711 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,713 | INFO     | sum of deviations: -50160319885.99999
[2025-06-05 06:50:52] 2025-06-05 03:32:24,713 | INFO     | mean x: 1749087505.0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,713 | INFO     | mean y: 2512868.4751131223
[2025-06-05 06:50:52] 2025-06-05 03:32:24,713 | INFO     | -- intersect: 26216041264.414406
[2025-06-05 06:50:52] 2025-06-05 03:32:24,713 | INFO     | intersect: 26216041264.414406
[2025-06-05 06:50:52] 2025-06-05 03:32:24,713 | INFO     | chi2: 0.9729706543546824
[2025-06-05 06:50:52] 2025-06-05 03:32:24,714 | INFO     | current chi2=0.9729706543546824 (change=61.42716623565446 %)
[2025-06-05 06:50:52] 2025-06-05 03:32:24,714 | INFO     | sum of square deviations: 3124858590.0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,716 | INFO     | sum of deviations: -47692237041.49999
[2025-06-05 06:50:52] 2025-06-05 03:32:24,716 | INFO     | mean x: 1749087657.5
[2025-06-05 06:50:52] 2025-06-05 03:32:24,716 | INFO     | mean y: 2511136.7453703703
[2025-06-05 06:50:52] 2025-06-05 03:32:24,716 | INFO     | -- intersect: 26697448128.39079
[2025-06-05 06:50:52] 2025-06-05 03:32:24,716 | INFO     | intersect: 26697448128.39079
[2025-06-05 06:50:52] 2025-06-05 03:32:24,716 | INFO     | chi2: 0.9587782451033726
[2025-06-05 06:50:52] 2025-06-05 03:32:24,717 | INFO     | current chi2=0.9587782451033726 (change=1.4586677602031957 %)
[2025-06-05 06:50:52] 2025-06-05 03:32:24,717 | INFO     | left removable region: 20
[2025-06-05 06:50:52] 2025-06-05 03:32:24,717 | INFO     | sum of square deviations: 2299168690.0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,719 | INFO     | sum of deviations: -18166785881.999996
[2025-06-05 06:50:52] 2025-06-05 03:32:24,719 | INFO     | mean x: 1749087627.0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,719 | INFO     | mean y: 2511616.046153846
[2025-06-05 06:50:52] 2025-06-05 03:32:24,719 | INFO     | -- intersect: 13822854832.604342
[2025-06-05 06:50:52] 2025-06-05 03:32:24,719 | INFO     | intersect: 13822854832.604342
[2025-06-05 06:50:52] 2025-06-05 03:32:24,720 | INFO     | chi2: 0.13304219315765653
[2025-06-05 06:50:52] 2025-06-05 03:32:24,720 | INFO     | -- intersect: 13822854832.604342
[2025-06-05 06:50:52] 2025-06-05 03:32:24,720 | INFO     | current memory leak: -7.90 B/s (using 195 data points, chi2=0.13)
[2025-06-05 06:50:52] 2025-06-05 03:32:24,721 | INFO     | ..............................
[2025-06-05 06:50:52] 2025-06-05 03:32:24,721 | INFO     | . Timing measurements:
[2025-06-05 06:50:52] 2025-06-05 03:32:24,721 | INFO     | . get job = 0 s
[2025-06-05 06:50:52] 2025-06-05 03:32:24,721 | INFO     | . initial setup = 2 s
[2025-06-05 06:50:52] 2025-06-05 03:32:24,721 | INFO     | . payload setup = 14 s
[2025-06-05 06:50:52] 2025-06-05 03:32:24,721 | INFO     | . stage-in = 0 s
[2025-06-05 06:50:52] 2025-06-05 03:32:24,721 | INFO     | . payload execution = 13772 s
[2025-06-05 06:50:52] 2025-06-05 03:32:24,721 | INFO     | . stage-out = 2 s
[2025-06-05 06:50:52] 2025-06-05 03:32:24,721 | INFO     | . log creation = 0 s
[2025-06-05 06:50:52] 2025-06-05 03:32:24,721 | INFO     | ..............................
[2025-06-05 06:50:52] 2025-06-05 03:32:24,875 | INFO     | 
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | job summary report
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | --------------------------------------------------
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | PanDA job id: 6678287290
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | task id: 45006595
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | errors: (none)
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | pilot state: finished 
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | transexitcode: 0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | exeerrorcode: 0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | exeerrordiag: 
[2025-06-05 06:50:52] 2025-06-05 03:32:24,876 | INFO     | exitcode: 0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | exitmsg: OK
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | cpuconsumptiontime: 52713 s
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | nevents: 400
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | neventsw: 0
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | pid: 17757
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | pgrp: 17757
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | corecount: 8
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | event service: False
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | sizes: {0: 2397343, 1: 2397343, 12: 2397371, 13: 2397605, 22: 2397661, 13791: 2427441, 13794: 2436440, 13890: 2436554}
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | --------------------------------------------------
[2025-06-05 06:50:52] 2025-06-05 03:32:24,877 | INFO     | 
[2025-06-05 06:50:52] 2025-06-05 03:32:24,878 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2025-06-05 06:50:52] 2025-06-05 03:32:24,914 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,914 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,914 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:50:52] 2025-06-05 03:32:24,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:50:52] 2025-06-05 03:32:24,916 | INFO     | job 6678287290 has completed (purged errors)
[2025-06-05 06:50:52] 2025-06-05 03:32:24,916 | INFO     | overall cleanup function is called
[2025-06-05 06:50:52] 2025-06-05 03:32:25,926 | INFO     | --- collectZombieJob: --- 10, [17757]
[2025-06-05 06:50:52] 2025-06-05 03:32:25,927 | INFO     | zombie collector waiting for pid 17757
[2025-06-05 06:50:52] 2025-06-05 03:32:25,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:50:52] 2025-06-05 03:32:25,927 | INFO     | collected zombie processes
[2025-06-05 06:50:52] 2025-06-05 03:32:25,927 | INFO     | will attempt to kill all subprocesses of pid=17757
[2025-06-05 06:50:52] 2025-06-05 03:32:26,031 | INFO     | process IDs to be killed: [17757] (in reverse order)
[2025-06-05 06:50:52] 2025-06-05 03:32:26,244 | INFO     | 13931s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 06:50:52] 2025-06-05 03:32:26,639 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:50:52] 2025-06-05 03:32:26,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:50:52] 2025-06-05 03:32:26,643 | INFO     | did not find any defunct processes belonging to 17757
[2025-06-05 06:50:52] 2025-06-05 03:32:26,646 | INFO     | did not find any defunct processes belonging to 17757
[2025-06-05 06:50:52] 2025-06-05 03:32:26,647 | INFO     | ready for new job
[2025-06-05 06:50:52] 2025-06-05 03:32:26,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:50:52] 2025-06-05 03:32:26,649 | INFO     | **************************************
[2025-06-05 06:50:52] 2025-06-05 03:32:26,649 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:50:52] 2025-06-05 03:32:26,649 | INFO     | **************************************
[2025-06-05 06:50:52] 2025-06-05 03:32:26,649 | INFO     | 
[2025-06-05 06:50:52] 2025-06-05 03:32:26,650 | INFO     | pilot is running in a VM
[2025-06-05 06:50:52] 2025-06-05 03:32:26,650 | INFO     | architecture information:
[2025-06-05 06:50:52] 2025-06-05 03:32:26,653 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:50:52] 2025-06-05 03:32:26,776 | INFO     | cat /etc/os-release:
[2025-06-05 06:50:52] NAME="CentOS Linux"
[2025-06-05 06:50:52] VERSION="7 (Core)"
[2025-06-05 06:50:52] ID="centos"
[2025-06-05 06:50:52] ID_LIKE="rhel fedora"
[2025-06-05 06:50:52] VERSION_ID="7"
[2025-06-05 06:50:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:50:52] ANSI_COLOR="0;31"
[2025-06-05 06:50:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:50:52] HOME_URL="https://www.centos.org/"
[2025-06-05 06:50:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:50:52] 
[2025-06-05 06:50:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:50:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:50:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:50:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:50:52] 
[2025-06-05 06:50:52] 2025-06-05 03:32:26,777 | INFO     | **************************************
[2025-06-05 06:50:52] 2025-06-05 03:32:27,280 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2025-06-05 06:50:52] 2025-06-05 03:32:27,456 | INFO     | sufficient remaining disk space (497505271808 B)
[2025-06-05 06:50:52] 2025-06-05 03:32:27,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:50:52] 2025-06-05 03:32:27,456 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:50:52] 2025-06-05 03:32:27,457 | INFO     | update_server=False
[2025-06-05 06:50:52] 2025-06-05 03:32:27,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:50:52] 2025-06-05 03:32:27,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:50:52] 2025-06-05 03:32:27,458 | INFO     | aborting loop
[2025-06-05 06:50:52] 2025-06-05 03:32:27,461 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 06:50:52] 2025-06-05 03:32:27,462 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:50:52] 2025-06-05 03:32:27,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:50:52] 2025-06-05 03:32:27,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:50:52] 2025-06-05 03:32:27,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:50:52] 2025-06-05 03:32:28,078 | INFO     | all data control threads have been joined
[2025-06-05 06:50:52] 2025-06-05 03:32:28,461 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:28,463 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:28,591 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:28,770 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:28,876 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:28,909 | INFO     | [job] validate thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:28,916 | INFO     | all payload control threads have been joined
[2025-06-05 06:50:52] 2025-06-05 03:32:28,991 | INFO     | all job control threads have been joined
[2025-06-05 06:50:52] 2025-06-05 03:32:29,084 | INFO     | [data] control thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:29,337 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:29,348 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:29,389 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:29,534 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:29,673 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:29,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:50:52] 2025-06-05 03:32:29,922 | INFO     | [payload] control thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:29,997 | INFO     | [job] control thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:30,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:50:52] 2025-06-05 03:32:30,898 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:34,252 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:50:52] 2025-06-05 03:32:35,836 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643020785472)>', '<ExcThread(monitor, started 140642437023488)>']
[2025-06-05 06:50:52] 2025-06-05 03:32:36,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:50:52] 2025-06-05 03:32:36,517 | INFO     | [monitor] control thread has ended
[2025-06-05 06:50:52] 2025-06-05 03:32:40,862 | INFO     | all workflow threads have been joined
[2025-06-05 06:50:52] 2025-06-05 03:32:40,863 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:50:52] 2025-06-05 03:32:40,863 | INFO     | traces error code: 0
[2025-06-05 06:50:52] 2025-06-05 03:32:40,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:50:52] 2025-06-05 03:32:41,378 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:50:52] 2025-06-05 03:32:41,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:50:52] 2025-06-05 03:32:41,573 [wrapper] pilotpid: 9119
[2025-06-05 06:50:52] 2025-06-05 03:32:41,662 [wrapper] Pilot exit status: 0
[2025-06-05 06:50:52] 2025-06-05 03:32:41,776 [wrapper] pandaids: 6678287290
[2025-06-05 06:50:52] 2025-06-05 03:32:41,851 [wrapper] cleanup supervisor_pilot 15492 9120
[2025-06-05 06:50:52] 2025-06-05 03:32:41,864 [wrapper] Test setup, not cleaning
[2025-06-05 06:50:52] 2025-06-05 03:32:41,880 [wrapper] apfmon messages muted
[2025-06-05 06:50:52] 2025-06-05 03:32:41,893 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:50:52] 2025-06-05 03:32:41,907 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:50:52]  *** Error codes and diagnostics ***
[2025-06-05 06:50:52]     "exeErrorCode": 0,
[2025-06-05 06:50:52]     "exeErrorDiag": "",
[2025-06-05 06:50:52]     "pilotErrorCode": 0,
[2025-06-05 06:50:52]     "pilotErrorDiag": "",
[2025-06-05 06:50:52]  *** Listing of results directory ***
[2025-06-05 06:50:52] total 397788
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc      5111 Jun  4 06:09 queuedata.json
[2025-06-05 06:50:52] -rwx------. 1 boinc boinc     37140 Jun  4 06:10 runpilot2-wrapper.sh
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc       100 Jun  5 01:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:50:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 01:39 run_atlas
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc       105 Jun  5 01:39 job.xml
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc      6393 Jun  5 01:39 init_data.xml
[2025-06-05 06:50:52] -rw-r--r--. 2 boinc boinc 216387277 Jun  5 01:39 EVNT.45006593._002081.pool.root.1
[2025-06-05 06:50:52] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:39 start_atlas.sh
[2025-06-05 06:50:52] drwxrwx--x. 2 boinc boinc        68 Jun  5 01:39 shared
[2025-06-05 06:50:52] -rw-r--r--. 2 boinc boinc    508883 Jun  5 01:39 input.tar.gz
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc         0 Jun  5 01:39 boinc_lockfile
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc      2525 Jun  5 01:39 pandaJob.out
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc    987117 Jun  5 01:40 agis_schedconf.cvmfs.json
[2025-06-05 06:50:52] drwx------. 4 boinc boinc      4096 Jun  5 01:40 pilot3
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc 183974389 Jun  5 05:29 HITS.45006595._051937.pool.root.1
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc       530 Jun  5 05:29 boinc_task_state.xml
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc      1017 Jun  5 05:30 memory_monitor_summary.json
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc   1598969 Jun  5 05:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc    377506 Jun  5 05:30 log.45006595._051937.job.log.tgz.1
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc        95 Jun  5 05:31 pilot_heartbeat.json
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc      7687 Jun  5 05:32 heartbeat.json
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc      4540 Jun  5 05:32 pilotlog.txt
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc   1200987 Jun  5 05:32 log.45006595._051937.job.log.1
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc       357 Jun  5 05:32 output.list
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:32 runtime_log
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc   1597440 Jun  5 05:32 result.tar.gz
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc      8673 Jun  5 05:32 runtime_log.err
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc       657 Jun  5 05:32 3jwNDmddug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm07mKDmtrOeXm.diag
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc      8192 Jun  5 06:50 boinc_mmap_file
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc        28 Jun  5 06:50 wrapper_checkpoint.txt
[2025-06-05 06:50:52] -rw-r--r--. 1 boinc boinc     20521 Jun  5 06:50 stderr.txt
[2025-06-05 06:50:52] HITS file was successfully produced:
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc 183974389 Jun  5 05:29 shared/HITS.pool.root.1
[2025-06-05 06:50:52]  *** Contents of shared directory: ***
[2025-06-05 06:50:52] total 393056
[2025-06-05 06:50:52] -rw-r--r--. 2 boinc boinc 216387277 Jun  5 01:39 ATLAS.root_0
[2025-06-05 06:50:52] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:39 start_atlas.sh
[2025-06-05 06:50:52] -rw-r--r--. 2 boinc boinc    508883 Jun  5 01:39 input.tar.gz
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc 183974389 Jun  5 05:29 HITS.pool.root.1
[2025-06-05 06:50:52] -rw-------. 1 boinc boinc   1597440 Jun  5 05:32 result.tar.gz
06:50:54 (5463): run_atlas exited; CPU time 52887.789416
06:50:54 (5463): called boinc_finish(0)

</stderr_txt>
]]>

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