Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 09:31:24 (81108): Detected: vboxwrapper 26206
2025-06-04 09:31:24 (81108): Detected: BOINC client v8.0.2
2025-06-04 09:31:25 (81108): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-06-04 09:31:25 (81108): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 09:31:26 (81108): Create VM. (boinc_a6f8b51130cf4fa8, slot#0)
2025-06-04 09:31:26 (81108): Setting Memory Size for VM. (4800MB)
2025-06-04 09:31:27 (81108): Setting CPU Count for VM. (8)
2025-06-04 09:31:27 (81108): Setting Chipset Options for VM.
2025-06-04 09:31:27 (81108): Setting Graphics Controller Options for VM.
2025-06-04 09:31:27 (81108): Setting Boot Options for VM.
2025-06-04 09:31:28 (81108): Setting Network Configuration for NAT.
2025-06-04 09:31:28 (81108): Enabling VM Network Access.
2025-06-04 09:31:28 (81108): Disabling USB Support for VM.
2025-06-04 09:31:28 (81108): Disabling COM Port Support for VM.
2025-06-04 09:31:29 (81108): Disabling LPT Port Support for VM.
2025-06-04 09:31:29 (81108): Disabling Audio Support for VM.
2025-06-04 09:31:29 (81108): Disabling Clipboard Support for VM.
2025-06-04 09:31:29 (81108): Disabling Drag and Drop Support for VM.
2025-06-04 09:31:30 (81108): Adding storage controller(s) to VM.
2025-06-04 09:31:30 (81108): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 09:31:33 (81108): Adding VirtualBox Guest Additions to VM.
2025-06-04 09:31:33 (81108): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 09:31:33 (81108): forwarding host port 63170 to guest port 80
2025-06-04 09:31:34 (81108): Enabling remote desktop for VM.
2025-06-04 09:31:34 (81108): Required extension pack not installed, remote desktop not enabled.
2025-06-04 09:31:34 (81108): Enabling shared directory for VM.
2025-06-04 09:31:34 (81108): Starting VM using VBoxManage interface. (boinc_a6f8b51130cf4fa8, slot#0)
2025-06-04 09:31:39 (81108): Successfully started VM. (PID = '82276')
2025-06-04 09:31:39 (81108): Reporting VM Process ID to BOINC.
2025-06-04 09:31:39 (81108): Guest Log: BIOS: VirtualBox 7.1.4
2025-06-04 09:31:39 (81108): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 09:31:39 (81108): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 09:31:39 (81108): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 09:31:39 (81108): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 09:31:39 (81108): Detected: Web Application Enabled (http://localhost:63170)
2025-06-04 09:31:39 (81108): Preference change detected
2025-06-04 09:31:39 (81108): Setting CPU throttle for VM. (100%)
2025-06-04 09:31:40 (81108): Setting network throttle for VM. (1024KB)
2025-06-04 09:31:40 (81108): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 09:31:41 (81108): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 09:31:41 (81108): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 09:31:43 (81108): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 09:31:43 (81108): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 09:31:43 (81108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 09:32:48 (81108): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 09:32:48 (81108): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 09:32:52 (81108): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 09:32:52 (81108): Guest Log: 00:00:00.000150 main     Log opened 2025-06-04T09:32:50.390350000Z
2025-06-04 09:32:52 (81108): Guest Log: 00:00:00.000240 main     OS Product: Linux
2025-06-04 09:32:52 (81108): Guest Log: 00:00:00.000264 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 09:32:52 (81108): Guest Log: 00:00:00.000283 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 09:32:52 (81108): Guest Log: 00:00:00.000301 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 09:32:52 (81108): Guest Log: 00:00:00.000302 main     Process ID: 1374
2025-06-04 09:32:52 (81108): Guest Log: 00:00:00.000302 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 09:32:52 (81108): Guest Log: 00:00:00.000845 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 09:32:52 (81108): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 09:32:52 (81108): Guest Log: [INFO] Mounting shared directory
2025-06-04 09:32:52 (81108): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 09:32:54 (81108): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 09:32:54 (81108): Guest Log: [INFO] Detected branch: prod
2025-06-04 09:32:54 (81108): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 09:32:54 (81108): Guest Log: Copying input files
2025-06-04 09:32:55 (81108): Guest Log: Copied input files into RunAtlas.
2025-06-04 09:32:55 (81108): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.3:3128 - will set in /etc/cvmfs/default.local
2025-06-04 09:33:02 (81108): Guest Log: 00:00:10.002401 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 409 347 091 000ns (GuestNow=1 749 043 979 739 344 000 ns GuestLast=1 749 029 570 392 253 000 ns fSetTimeLastLoop=true )
2025-06-04 09:33:03 (81108): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 09:33:03 (81108): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 09:33:03 (81108): Guest Log: 2.6.3.0 1652 0 29628 146781 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.3:3128 1
2025-06-04 09:33:04 (81108): Guest Log: copied the webapp to /var/www
2025-06-04 09:33:04 (81108): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 09:33:04 (81108): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 09:33:04 (81108): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 09:33:04 (81108): Guest Log:  *** Starting ATLAS job. (PandaID=6678312676 taskID=45006595) ***
2025-06-04 10:16:58 (81108): Guest Log:  *** Job finished ***
2025-06-04 10:16:58 (81108): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:38,764 | INFO     | [data] queue_monitor thread has finished
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:44,997 | INFO     | job.realtimelogging is not enabled
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:46,001 | INFO     | [payload] run_realtimelog thread has finished
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:47,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122257700672)>', '<ExcThread(monitor, started 140121647060736)>']
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:47,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:47,871 | INFO     | [monitor] control thread has ended
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,755 | INFO     | all workflow threads have been joined
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,755 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,755 | INFO     | traces error code: 0
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,815 [wrapper] ==== pilot stdout END ====
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,819 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,823 [wrapper] pilotpid: 5994
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,827 [wrapper] Pilot exit status: 0
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,846 [wrapper] pandaids: 6678312676
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,870 [wrapper] cleanup supervisor_pilot 19506 5995
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,873 [wrapper] Test setup, not cleaning
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,877 [wrapper] apfmon messages muted
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,881 [wrapper] ==== wrapper stdout END ====
2025-06-04 10:16:58 (81108): Guest Log: 2025-06-04 14:16:52,884 [wrapper] ==== wrapper stderr END ====
2025-06-04 10:16:58 (81108): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 10:16:58 (81108): Guest Log:     "exeErrorCode": 0,
2025-06-04 10:16:58 (81108): Guest Log:     "exeErrorDiag": "",
2025-06-04 10:16:58 (81108): Guest Log:     "pilotErrorCode": 0,
2025-06-04 10:16:58 (81108): Guest Log:     "pilotErrorDiag": "",
2025-06-04 10:16:58 (81108): Guest Log:  *** Listing of results directory ***
2025-06-04 10:16:58 (81108): Guest Log: total 184952
2025-06-04 10:16:58 (81108): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  4 04:04 pilot3.tar.gz
2025-06-04 10:16:58 (81108): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 04:09 queuedata.json
2025-06-04 10:16:58 (81108): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 04:10 runpilot2-wrapper.sh
2025-06-04 10:16:58 (81108): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 Jun  4 13:32 input.tar.gz
2025-06-04 10:16:58 (81108): Guest Log: -rwxr-xr-x. 1 atlas atlas      9304 Jun  4 13:32 init_data.xml
2025-06-04 10:16:58 (81108): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 13:32 start_atlas.sh
2025-06-04 10:16:58 (81108): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 13:32 EVNT.45006593._002087.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 10:16:58 (81108): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  4 13:33 pandaJob.out
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas    986819 Jun  4 13:33 agis_schedconf.cvmfs.json
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 13:33 agis_ddmendpoints.agis.ALL.json
2025-06-04 10:16:58 (81108): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 13:33 pilot3
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 14:15 pilot_heartbeat.json
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas 184533896 Jun  4 14:15 HITS.45006595._052122.pool.root.1
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas      1038 Jun  4 14:16 memory_monitor_summary.json
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas    288160 Jun  4 14:16 log.45006595._052122.job.log.tgz.1
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas      7704 Jun  4 14:16 heartbeat.json
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas      4485 Jun  4 14:16 pilotlog.txt
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas    258150 Jun  4 14:16 log.45006595._052122.job.log.1
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 14:16 output.list
2025-06-04 10:16:58 (81108): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 14:16 runtime_log
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas    563200 Jun  4 14:16 result.tar.gz
2025-06-04 10:16:58 (81108): Guest Log: -rw-r--r--. 1 atlas atlas      8591 Jun  4 14:16 runtime_log.err
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas       654 Jun  4 14:16 cEZKDm1dug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm28mKDmuoSGrm.diag
2025-06-04 10:16:58 (81108): Guest Log: Looking for outputfile HITS.45006595._052122.pool.root.1
2025-06-04 10:16:58 (81108): Guest Log: HITS file was successfully produced
2025-06-04 10:16:58 (81108): Guest Log: -rw-------. 1 atlas atlas 184533896 Jun  4 14:15 /home/atlas/RunAtlas/HITS.45006595._052122.pool.root.1
2025-06-04 10:16:58 (81108): Guest Log: Successfully finished the ATLAS job!
2025-06-04 10:16:58 (81108): Guest Log: Copying the results back to the shared directory!
2025-06-04 10:16:58 (81108): Guest Log:  *** Contents of shared directory: ***
2025-06-04 10:16:58 (81108): Guest Log: total 392656
2025-06-04 10:16:58 (81108): Guest Log: -rwxrwxrwx. 1 root root 216433074 Jun  4 13:31 ATLAS.root_0
2025-06-04 10:16:58 (81108): Guest Log: -rwxrwxrwx. 1 root root 184533896 Jun  4  2025 HITS.pool.root.1
2025-06-04 10:16:58 (81108): Guest Log: -rwxrwxrwx. 1 root root      9304 Jun  4 13:31 init_data.xml
2025-06-04 10:16:58 (81108): Guest Log: -rwxrwxrwx. 1 root root    508881 Jun  4 09:15 input.tar.gz
2025-06-04 10:16:58 (81108): Guest Log: -rwxrwxrwx. 1 root root    563200 Jun  4  2025 result.tar.gz
2025-06-04 10:16:58 (81108): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 09:15 start_atlas.sh
2025-06-04 10:16:58 (81108): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 10:16:58 (81108): VM Completion File Detected.
2025-06-04 10:16:58 (81108): Powering off VM.
2025-06-04 10:16:58 (81108): Successfully stopped VM.
2025-06-04 10:16:58 (81108): Deregistering VM. (boinc_a6f8b51130cf4fa8, slot#0)
2025-06-04 10:16:58 (81108): Removing network bandwidth throttle group from VM.
2025-06-04 10:16:58 (81108): Removing VM from VirtualBox.
10:17:04 (81108): called boinc_finish(0)

</stderr_txt>
]]>

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