Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:08:36 (3697124): wrapper (7.7.26015): starting
00:08:36 (3697124): wrapper: running run_atlas (--nthreads 3)
[2025-06-06 00:08:36] Arguments: --nthreads 3
[2025-06-06 00:08:36] Threads: 3
[2025-06-06 00:08:36] Checking for CVMFS
[2025-06-06 00:08:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 00:08:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 00:08:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 00:08:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 00:08:36] 2.11.5.0 3670578 118 50768 146822 2 56 24986518 31457280 0 130560 0 71755 99.975 74017 205 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-06 00:08:36] CVMFS is ok
[2025-06-06 00:08:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:08:36] Checking for apptainer binary...
[2025-06-06 00:08:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 00:08:36] Running /usr/bin/apptainer --version
[2025-06-06 00:08:36] apptainer version 1.3.4-1.el9
[2025-06-06 00:08:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:08:36] testio001
[2025-06-06 00:08:36] apptainer works
[2025-06-06 00:08:36] Set ATHENA_PROC_NUMBER=3
[2025-06-06 00:08:36] Set ATHENA_CORE_NUMBER=3
[2025-06-06 00:08:36] Starting ATLAS job with PandaID=6678365391
[2025-06-06 00:08:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 02:05:00]  *** The last 200 lines of the pilot log: ***
[2025-06-06 02:05:00] 2025-06-05 17:04:42,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 02:05:00] 2025-06-05 17:04:42,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 02:05:00] 2025-06-05 17:04:42,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 02:05:00] 2025-06-05 17:04:42,301 | INFO     | fitting pss+swap vs Time
[2025-06-06 02:05:00] 2025-06-05 17:04:42,301 | INFO     | sum of square deviations: 447383272.0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,301 | INFO     | sum of deviations: 27599420048.999992
[2025-06-06 02:05:00] 2025-06-05 17:04:42,301 | INFO     | mean x: 1749139562.0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,301 | INFO     | mean y: 2236870.9911504425
[2025-06-06 02:05:00] 2025-06-05 17:04:42,301 | INFO     | -- intersect: -107903535466.33904
[2025-06-06 02:05:00] 2025-06-05 17:04:42,301 | INFO     | intersect: -107903535466.33904
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | chi2: 4.135944027345179
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | sum of square deviations: 390582207.0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | sum of deviations: 33320939875.999996
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | mean x: 1749139409.5
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | mean y: 2251553.3518518517
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | -- intersect: -149218496484.1839
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | intersect: -149218496484.1839
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | chi2: 3.3458410698211805
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | current chi2=3.3458410698211805 (change=19.103328098740192 %)
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | right removable region: 107
[2025-06-06 02:05:00] 2025-06-05 17:04:42,302 | INFO     | sum of square deviations: 390582207.0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | sum of deviations: 6140066751.999999
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | mean x: 1749139714.5
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | mean y: 2294089.7592592593
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | -- intersect: -27494694797.91995
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | intersect: -27494694797.91995
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | chi2: 2.1770574758264525
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | current chi2=2.1770574758264525 (change=47.36250148859283 %)
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | sum of square deviations: 338804492.0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | sum of deviations: -11703703817.0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | mean x: 1749139867.0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | mean y: 2346870.0291262134
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | -- intersect: 60424848404.85168
[2025-06-06 02:05:00] 2025-06-05 17:04:42,303 | INFO     | intersect: 60424848404.85168
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | chi2: 0.9185627366443451
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | current chi2=0.9185627366443451 (change=57.80714350246351 %)
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | sum of square deviations: 291817564.5
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | sum of deviations: -12636992471.0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | mean x: 1749140019.5
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | mean y: 2349630.673469388
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | -- intersect: 75747856228.32822
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | intersect: 75747856228.32822
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | chi2: 0.8569800473085373
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | current chi2=0.8569800473085373 (change=6.70424423711973 %)
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | left removable region: 30
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | sum of square deviations: 141539398.0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,304 | INFO     | sum of deviations: -1584667332.9999998
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | mean x: 1749140294.0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | mean y: 2353131.8441558443
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | -- intersect: 19585631878.980095
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | intersect: 19585631878.980095
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | chi2: 0.014850868712819933
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | -- intersect: 19585631878.980095
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | current memory leak: -11.20 B/s (using 77 data points, chi2=0.01)
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | ..............................
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | . Timing measurements:
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | . get job = 0 s
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | . initial setup = 7 s
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | . payload setup = 2 s
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | . stage-in = 0 s
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | . payload execution = 6850 s
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | . stage-out = 0 s
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | . log creation = 0 s
[2025-06-06 02:05:00] 2025-06-05 17:04:42,305 | INFO     | ..............................
[2025-06-06 02:05:00] 2025-06-05 17:04:42,344 | INFO     | 
[2025-06-06 02:05:00] 2025-06-05 17:04:42,344 | INFO     | job summary report
[2025-06-06 02:05:00] 2025-06-05 17:04:42,344 | INFO     | --------------------------------------------------
[2025-06-06 02:05:00] 2025-06-05 17:04:42,344 | INFO     | PanDA job id: 6678365391
[2025-06-06 02:05:00] 2025-06-05 17:04:42,344 | INFO     | task id: 45006595
[2025-06-06 02:05:00] 2025-06-05 17:04:42,344 | INFO     | errors: (none)
[2025-06-06 02:05:00] 2025-06-05 17:04:42,344 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 02:05:00] 2025-06-05 17:04:42,344 | INFO     | pilot state: finished 
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | transexitcode: 0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | exeerrorcode: 0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | exeerrordiag: 
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | exitcode: 0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | exitmsg: OK
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | cpuconsumptiontime: 17242 s
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | nevents: 400
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | neventsw: 0
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | pid: 3707067
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | pgrp: 3707067
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | corecount: 3
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | event service: False
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | sizes: {0: 2397342, 2: 2397548, 11: 2397576, 6857: 2424594, 6858: 2433591, 6942: 2433705}
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | --------------------------------------------------
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | 
[2025-06-06 02:05:00] 2025-06-05 17:04:42,345 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 02:05:00] 2025-06-05 17:04:42,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,356 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 02:05:00] 2025-06-05 17:04:42,356 | INFO     | job 6678365391 has completed (purged errors)
[2025-06-06 02:05:00] 2025-06-05 17:04:42,356 | INFO     | overall cleanup function is called
[2025-06-06 02:05:00] 2025-06-05 17:04:42,495 | INFO     | PID=3700711 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 02:05:00] 2025-06-05 17:04:43,362 | INFO     | --- collectZombieJob: --- 10, [3707067]
[2025-06-06 02:05:00] 2025-06-05 17:04:43,362 | INFO     | zombie collector waiting for pid 3707067
[2025-06-06 02:05:00] 2025-06-05 17:04:43,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 02:05:00] 2025-06-05 17:04:43,362 | INFO     | collected zombie processes
[2025-06-06 02:05:00] 2025-06-05 17:04:43,362 | INFO     | will attempt to kill all subprocesses of pid=3707067
[2025-06-06 02:05:00] 2025-06-05 17:04:43,395 | INFO     | process IDs to be killed: [3707067] (in reverse order)
[2025-06-06 02:05:00] 2025-06-05 17:04:43,414 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 02:05:00] 2025-06-05 17:04:43,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 02:05:00] 2025-06-05 17:04:43,415 | INFO     | did not find any defunct processes belonging to 3707067
[2025-06-06 02:05:00] 2025-06-05 17:04:43,416 | INFO     | did not find any defunct processes belonging to 3707067
[2025-06-06 02:05:00] 2025-06-05 17:04:43,417 | INFO     | ready for new job
[2025-06-06 02:05:00] 2025-06-05 17:04:43,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 02:05:00] 2025-06-05 17:04:43,418 | INFO     | **************************************
[2025-06-06 02:05:00] 2025-06-05 17:04:43,418 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 02:05:00] 2025-06-05 17:04:43,418 | INFO     | **************************************
[2025-06-06 02:05:00] 2025-06-05 17:04:43,418 | INFO     | 
[2025-06-06 02:05:00] 2025-06-05 17:04:43,429 | INFO     | architecture information:
[2025-06-06 02:05:00] 2025-06-05 17:04:43,430 | INFO     | executing command: cat /etc/os-release
[2025-06-06 02:05:00] 2025-06-05 17:04:43,437 | INFO     | cat /etc/os-release:
[2025-06-06 02:05:00] NAME="CentOS Linux"
[2025-06-06 02:05:00] VERSION="7 (Core)"
[2025-06-06 02:05:00] ID="centos"
[2025-06-06 02:05:00] ID_LIKE="rhel fedora"
[2025-06-06 02:05:00] VERSION_ID="7"
[2025-06-06 02:05:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 02:05:00] ANSI_COLOR="0;31"
[2025-06-06 02:05:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 02:05:00] HOME_URL="https://www.centos.org/"
[2025-06-06 02:05:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 02:05:00] 
[2025-06-06 02:05:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 02:05:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 02:05:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 02:05:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 02:05:00] 
[2025-06-06 02:05:00] 2025-06-05 17:04:43,438 | INFO     | **************************************
[2025-06-06 02:05:00] 2025-06-05 17:04:43,940 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-06 02:05:00] 2025-06-05 17:04:43,948 | INFO     | sufficient remaining disk space (126871404544 B)
[2025-06-06 02:05:00] 2025-06-05 17:04:43,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 02:05:00] 2025-06-05 17:04:43,949 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 02:05:00] 2025-06-05 17:04:43,949 | INFO     | update_server=False
[2025-06-06 02:05:00] 2025-06-05 17:04:43,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 02:05:00] 2025-06-05 17:04:43,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:05:00] 2025-06-05 17:04:43,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 02:05:00] 2025-06-05 17:04:44,091 | INFO     | all job control threads have been joined
[2025-06-06 02:05:00] 2025-06-05 17:04:44,180 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 02:05:00] 2025-06-05 17:04:44,180 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 02:05:00] 2025-06-05 17:04:44,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:05:00] 2025-06-05 17:04:44,180 | INFO     | will abort loop
[2025-06-06 02:05:00] 2025-06-05 17:04:44,500 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 02:05:00] 2025-06-05 17:04:44,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 02:05:00] 2025-06-05 17:04:44,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 02:05:00] 2025-06-05 17:04:44,641 | INFO     | all data control threads have been joined
[2025-06-06 02:05:00] 2025-06-05 17:04:44,937 | INFO     | all payload control threads have been joined
[2025-06-06 02:05:00] 2025-06-05 17:04:44,953 | INFO     | [job] retrieve thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:44,954 | INFO     | [job] queue monitor thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,096 | INFO     | [job] control thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,185 | INFO     | [job] job monitor thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,336 | INFO     | [data] copytool_in thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,338 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 02:05:00] 2025-06-05 17:04:45,339 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,352 | INFO     | [job] validate thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,359 | INFO     | [payload] validate_post thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,499 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,645 | INFO     | [data] control thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,942 | INFO     | [payload] control thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:45,954 | INFO     | [data] copytool_out thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:46,286 | INFO     | [payload] failed_post thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:49,344 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:54,156 | INFO     | job.realtimelogging is not enabled
[2025-06-06 02:05:00] 2025-06-05 17:04:55,161 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 02:05:00] 2025-06-05 17:04:55,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939050858304)>', '<ExcThread(monitor, started 139938414716672)>']
[2025-06-06 02:05:00] 2025-06-05 17:04:56,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 02:05:00] 2025-06-05 17:04:56,557 | INFO     | [monitor] control thread has ended
[2025-06-06 02:05:00] 2025-06-05 17:05:00,608 | INFO     | all workflow threads have been joined
[2025-06-06 02:05:00] 2025-06-05 17:05:00,608 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 02:05:00] 2025-06-05 17:05:00,608 | INFO     | traces error code: 0
[2025-06-06 02:05:00] 2025-06-05 17:05:00,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 02:05:00] 2025-06-05 17:05:00,670 [wrapper] ==== pilot stdout END ====
[2025-06-06 02:05:00] 2025-06-05 17:05:00,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 02:05:00] 2025-06-05 17:05:00,674 [wrapper] pilotpid: 3700711
[2025-06-06 02:05:00] 2025-06-05 17:05:00,676 [wrapper] Pilot exit status: 0
[2025-06-06 02:05:00] 2025-06-05 17:05:00,681 [wrapper] pandaids: 6678365391
[2025-06-06 02:05:00] 2025-06-05 17:05:00,692 [wrapper] cleanup supervisor_pilot 3720794 3700712
[2025-06-06 02:05:00] 2025-06-05 17:05:00,694 [wrapper] Test setup, not cleaning
[2025-06-06 02:05:00] 2025-06-05 17:05:00,695 [wrapper] apfmon messages muted
[2025-06-06 02:05:00] 2025-06-05 17:05:00,697 [wrapper] ==== wrapper stdout END ====
[2025-06-06 02:05:00] 2025-06-05 17:05:00,699 [wrapper] ==== wrapper stderr END ====
[2025-06-06 02:05:00]  *** Error codes and diagnostics ***
[2025-06-06 02:05:00]     "exeErrorCode": 0,
[2025-06-06 02:05:00]     "exeErrorDiag": "",
[2025-06-06 02:05:00]     "pilotErrorCode": 0,
[2025-06-06 02:05:00]     "pilotErrorDiag": "",
[2025-06-06 02:05:00]  *** Listing of results directory ***
[2025-06-06 02:05:00] total 388416
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc    495897 Jun  4 14:59 pilot3.tar.gz
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc      5111 Jun  4 15:35 queuedata.json
[2025-06-06 02:05:00] -rwx------. 1 boinc boinc     37140 Jun  4 15:36 runpilot2-wrapper.sh
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc       100 Jun  6 00:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 02:05:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  6 00:08 run_atlas
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc       105 Jun  6 00:08 job.xml
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc      9292 Jun  6 00:08 init_data.xml
[2025-06-06 02:05:00] -rw-r--r--. 2 boinc boinc 216328110 Jun  6 00:08 EVNT.45006593._002178.pool.root.1
[2025-06-06 02:05:00] -rw-r--r--. 2 boinc boinc     15093 Jun  6 00:08 start_atlas.sh
[2025-06-06 02:05:00] drwxrwx--x. 2 boinc boinc        68 Jun  6 00:08 shared
[2025-06-06 02:05:00] -rw-r--r--. 2 boinc boinc    508884 Jun  6 00:08 input.tar.gz
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc         0 Jun  6 00:08 boinc_lockfile
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc      2525 Jun  6 00:08 pandaJob.out
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc    983210 Jun  6 00:08 agis_schedconf.cvmfs.json
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc   1598969 Jun  6 00:08 agis_ddmendpoints.agis.ALL.json
[2025-06-06 02:05:00] drwx------. 4 boinc boinc      4096 Jun  6 00:08 pilot3
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc 175839752 Jun  6 02:02 HITS.45006595._054422.pool.root.1
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc      1016 Jun  6 02:03 memory_monitor_summary.json
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc       529 Jun  6 02:03 boinc_task_state.xml
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc    245282 Jun  6 02:03 log.45006595._054422.job.log.tgz.1
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc        95 Jun  6 02:04 pilot_heartbeat.json
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc      7668 Jun  6 02:04 heartbeat.json
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc        27 Jun  6 02:04 wrapper_checkpoint.txt
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc      8192 Jun  6 02:04 boinc_mmap_file
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc      4612 Jun  6 02:05 pilotlog.txt
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc    628214 Jun  6 02:05 log.45006595._054422.job.log.1
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc       357 Jun  6 02:05 output.list
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc       620 Jun  6 02:05 runtime_log
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc    890880 Jun  6 02:05 result.tar.gz
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc      8617 Jun  6 02:05 runtime_log.err
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc       643 Jun  6 02:05 iEDNDmouwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHYnKDm3k5KUm.diag
[2025-06-06 02:05:00] -rw-r--r--. 1 boinc boinc     20547 Jun  6 02:05 stderr.txt
[2025-06-06 02:05:00] HITS file was successfully produced:
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc 175839752 Jun  6 02:02 shared/HITS.pool.root.1
[2025-06-06 02:05:00]  *** Contents of shared directory: ***
[2025-06-06 02:05:00] total 384368
[2025-06-06 02:05:00] -rw-r--r--. 2 boinc boinc 216328110 Jun  6 00:08 ATLAS.root_0
[2025-06-06 02:05:00] -rw-r--r--. 2 boinc boinc     15093 Jun  6 00:08 start_atlas.sh
[2025-06-06 02:05:00] -rw-r--r--. 2 boinc boinc    508884 Jun  6 00:08 input.tar.gz
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc 175839752 Jun  6 02:02 HITS.pool.root.1
[2025-06-06 02:05:00] -rw-------. 1 boinc boinc    890880 Jun  6 02:05 result.tar.gz
02:05:01 (3697124): run_atlas exited; CPU time 17266.924976
02:05:01 (3697124): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN